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Mastrangelo R, Okada T, Ogura T, Ogura T, Baglioni P. Direct observation of the effects of chemical fixation in MNT-1 cells: A SE-ADM and Raman study. Proc Natl Acad Sci U S A 2023; 120:e2308088120. [PMID: 38091295 PMCID: PMC10743460 DOI: 10.1073/pnas.2308088120] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/15/2023] [Accepted: 10/16/2023] [Indexed: 12/18/2023] Open
Abstract
Aldehydes fixation was accidentally discovered in the early 20th century and soon became a widely adopted practice in the histological field, due to an excellent staining enhancement in tissues imaging. However, the fixation process itself entails cell proteins denaturation and crosslinking. The possible presence of artifacts, that depends on the specific system under observation, must therefore be considered to avoid data misinterpretation. This contribution takes advantage of scanning electron assisted-dielectric microscopy (SE-ADM) and Raman 2D imaging to reveal the possible presence and the nature of artifacts in unstained, and paraformldehyde, PFA, fixed MNT-1 cells. The high resolution of the innovative SE-ADM technique allowed the identification of globular protein clusters in the cell cytoplasm, formed after protein denaturation and crosslinking. Concurrently, SE-ADM images showed a preferential melanosome adsorption on the cluster's outer surface. The micron-sized aggregates were discernible in Raman 2D images, as the melanosomes signal, extracted through 2D principal component analysis, unequivocally mapped their location and distribution within the cells, appearing randomly distributed in the cytoplasm. Protein clusters were not observed in living MNT-1 cells. In this case, mature melanosomes accumulate preferentially at the cell periphery and are more closely packed than in fixed cells. Our results show that, although PFA does not affect the melanin structure, it disrupts melanosome distribution within the cells. Proteins secondary structure, conversely, is partially lost, as shown by the Raman signals related to α-helix, β-sheets, and specific amino acids that significantly decrease after the PFA treatment.
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Affiliation(s)
- Rosangela Mastrangelo
- Health and Medical Research Institute, National Institute of Advanced Industrial Science and Technology, Tsukuba305-8566, Japan
- NIKKOL GROUP Nikko Chemicals Co., Ltd., Tokyo174-0046, Japan
- Department of Chemistry and Consorzio Interuniversitario per lo Sviluppo dei Sistemi a Grande Interfase (Center for Colloid and Surface Science), University of Florence, FlorenceI-50019, Italy
| | - Tomoko Okada
- Health and Medical Research Institute, National Institute of Advanced Industrial Science and Technology, Tsukuba305-8566, Japan
| | - Taku Ogura
- NIKKOL GROUP Nikko Chemicals Co., Ltd., Tokyo174-0046, Japan
| | - Toshihiko Ogura
- Health and Medical Research Institute, National Institute of Advanced Industrial Science and Technology, Tsukuba305-8566, Japan
| | - Piero Baglioni
- Department of Chemistry and Consorzio Interuniversitario per lo Sviluppo dei Sistemi a Grande Interfase (Center for Colloid and Surface Science), University of Florence, FlorenceI-50019, Italy
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Zou T, Pu L, Lin R, Mo H, Wang Z, Jian S, Zhang M. Roles of Canavalia rosea metallothioneins in metal tolerance and extreme environmental adaptation to tropical coral reefs. JOURNAL OF PLANT PHYSIOLOGY 2022; 268:153559. [PMID: 34839100 DOI: 10.1016/j.jplph.2021.153559] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/11/2021] [Revised: 11/08/2021] [Accepted: 11/08/2021] [Indexed: 06/13/2023]
Abstract
Canavalia rosea (Sw.) DC is a perennial twining herb distributed in the semi-arid and saline-alkali areas of coastal regions and has evolved halotolerance. In this study, we present the first comprehensive survey of the metallothionein (MT) gene family in C. rosea. MT proteins belong to a family of low-molecular-weight polypeptides with a high content of cysteine residues, which have an affinity to bind with heavy metal ions. MTs also play important roles in stress responses as reactive oxygen species (ROS) scavengers. A total of six CrMTs were identified in the C. rosea genome and classified into four subgroups by phylogenetic analysis. An analysis of the cis-acting elements revealed that a series of hormone-, stress-, and development-related cis-acting elements were present in the promoter regions of CrMTs. The expression of CrMTs also showed habitat- and environmental stress-regulated patterns in C. rosea. CrMT overexpression in yeast enhanced tolerance to heavy metals and ROS, as well as high osmotic and alkalinity stress, which is consistent with their predicted roles as metal-chelating proteins and ROS scavengers. Our results indicate that the CrMT genes might contribute to the detoxification of plants to metals and provide marked tolerance against abiotic stress. The expression patterns of CrMTs in C. rosea also indicate that CrMTs play important roles in this species' response to extreme environments on tropical islands and reefs, probably by improving the thermotolerance of C. rosea plants.
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Affiliation(s)
- Tao Zou
- Key Laboratory of South China Agricultural Plant Molecular Analysis and Genetic Improvement & Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, 510650, China; Center of Economic Botany, Core Botanical Gardens, Chinese Academy of Sciences, Guangzhou, 510650, China; University of the Chinese Academy of Sciences, Beijing, 100039, China
| | - Lin Pu
- Key Laboratory of South China Agricultural Plant Molecular Analysis and Genetic Improvement & Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, 510650, China; University of the Chinese Academy of Sciences, Beijing, 100039, China; CAS Engineering Laboratory for Vegetation Ecosystem Restoration on Islands and Coastal Zones, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, 510650, China
| | - Ruoyi Lin
- Key Laboratory of South China Agricultural Plant Molecular Analysis and Genetic Improvement & Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, 510650, China; University of the Chinese Academy of Sciences, Beijing, 100039, China; CAS Engineering Laboratory for Vegetation Ecosystem Restoration on Islands and Coastal Zones, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, 510650, China
| | - Hui Mo
- Key Laboratory of South China Agricultural Plant Molecular Analysis and Genetic Improvement & Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, 510650, China; Center of Economic Botany, Core Botanical Gardens, Chinese Academy of Sciences, Guangzhou, 510650, China; CAS Engineering Laboratory for Vegetation Ecosystem Restoration on Islands and Coastal Zones, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, 510650, China; Key Laboratory of Vegetation Restoration and Management of Degraded Ecosystems, Center for Plant Ecology, Core Botanical Gardens, Chinese Academy of Sciences, Guangzhou, 510650, China
| | - Zhengfeng Wang
- Key Laboratory of South China Agricultural Plant Molecular Analysis and Genetic Improvement & Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, 510650, China; CAS Engineering Laboratory for Vegetation Ecosystem Restoration on Islands and Coastal Zones, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, 510650, China; Key Laboratory of Vegetation Restoration and Management of Degraded Ecosystems, Center for Plant Ecology, Core Botanical Gardens, Chinese Academy of Sciences, Guangzhou, 510650, China; Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou), Guangzhou, 511458, China
| | - Shuguang Jian
- Key Laboratory of South China Agricultural Plant Molecular Analysis and Genetic Improvement & Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, 510650, China; CAS Engineering Laboratory for Vegetation Ecosystem Restoration on Islands and Coastal Zones, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, 510650, China
| | - Mei Zhang
- Key Laboratory of South China Agricultural Plant Molecular Analysis and Genetic Improvement & Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, 510650, China; Center of Economic Botany, Core Botanical Gardens, Chinese Academy of Sciences, Guangzhou, 510650, China.
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3
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Carrillo JT, Borthakur D. Methods for metal chelation in plant homeostasis: Review. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2021; 163:95-107. [PMID: 33826996 DOI: 10.1016/j.plaphy.2021.03.045] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/22/2020] [Accepted: 03/20/2021] [Indexed: 05/01/2023]
Abstract
Metal uptake, transport and storage in plants depend on specialized ligands with closely related functions. Individual studies differing by species, nutrient availability, tissue type, etc. are not comprehensive enough to understand plant metal homeostasis in its entirety. A thorough review is required that distinguishes the role of ligands directly involved in chelation from the myriad of plant responses to general stress. Distinguishing between the functions of metal chelating compounds is the primary focus of this review; reactive oxygen species mediation and other aspects of metal homeostasis are also discussed. High molecular weight ligands (polysaccharides, phytochelatin, metallothionein), low molecular weight ligands (nicotianamine, histidine, secondary metabolites) and select studies which demonstrate the complex nature of plant metal homeostasis are explored.
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Affiliation(s)
- James T Carrillo
- University of Hawaii at Manoa, Department of Molecular Biology and Bioengineering, 1955 East-West Road, Agricultural Sciences 218, Honolulu, HI, 96822, USA.
| | - Dulal Borthakur
- University of Hawaii at Manoa, Department of Molecular Biology and Bioengineering, 1955 East-West Road, Agricultural Sciences 218, Honolulu, HI, 96822, USA.
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Malekzadeh R, Shahpiri A, Siapoush S. Metalation of a rice type 1 metallothionein isoform (OsMTI-1b). Protein Expr Purif 2020; 175:105719. [PMID: 32750405 DOI: 10.1016/j.pep.2020.105719] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/18/2020] [Revised: 06/11/2020] [Accepted: 07/25/2020] [Indexed: 11/15/2022]
Abstract
The simultaneously functions of Metallothioneins (MTs) are relied on their metalation mechanisms that can be divided into non-cooperative, weakly cooperative and strongly cooperative mechanisms. In this study, we recombinantly synthesized OsMTI-1b, N- and C-terminal Cys-rich regions as glutathione-S-transferase (GST)-fusion proteins in E. coli. In comparison with control strains (The E. coli cells containing pET41a without gene), transgenic E. coli cells showed more tolerance against Cd2+ and Zn2+. The recombinant GST-proteins were purified using affinity chromatography. According to in vitro assays, the recombinant proteins showed a higher binding ability to Cd2+ and Zn2+. However, the affinity of apo-proteins to Cu2+ ions were very low. The coordination of Cd2+ ions in OsMTI-1b demonstrates a strongly cooperative mechanism with a priority for the C-terminal Cys-rich region that indicates the detoxifying of heavy metals as main role of P1 subfamily of MTs. While the metalation with Zn2+ conformed to a weakly cooperative mechanism with a specificity to N-terminal Cys-rich region. It implies the specific function of OsMTI-1b is involved in zinc homeostasis. Nevertheless, a non-cooperative metalation mechanism was perceived for Cu2+ that suggests the fully metalation does not occur and OsMTI-1b cannot play a significant role in dealing with Cu2+ ions.
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Affiliation(s)
- Rahim Malekzadeh
- Department of Medical Biotechnology, School of Advanced Technologies, Shahrekord University of Medical Sciences, Shahrekord, 88157-13471, Iran; Student Research Committee, Shahrekord University of Medical Sciences, Shahrekord, Iran.
| | - Azar Shahpiri
- Department of Biotechnology, College of Agriculture, Isfahan University of Technology, Isfahan, 84156-83111, Iran
| | - Samaneh Siapoush
- Department of Medical Biotechnology, Faculty of Advanced Medical Sciences, Tabriz University of Medical Science, Tabriz, 51664-15731, Iran
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5
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Biophysical characterization of p53 core domain aggregates. Biochem J 2020; 477:111-120. [PMID: 31841126 DOI: 10.1042/bcj20190778] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/18/2019] [Revised: 12/12/2019] [Accepted: 12/13/2019] [Indexed: 12/16/2022]
Abstract
Aggregation is the cause of numerous protein conformation diseases. A common facet of these maladies is the transition of a protein from its functional native state into higher order forms, such as oligomers and amyloid fibrils. p53 is an essential tumor suppressor that is prone to such conformational transitions, resulting in its compromised ability to avert cancer. This work explores the biophysical properties of early-, mid-, and late-stage p53 core domain (p53C) aggregates. Atomistic and coarse-grained molecular dynamics (MD) simulations suggest that early- and mid-stage p53C aggregates have a polymorphic topology of antiparallel and parallel β-sheets that localize to the core amyloidogenic sequence. Both topologies involve similar extents of interstrand mainchain hydrogen bonding, while sidechain interactions could play a role in regulating strand orientation. The free energy difference between the antiparallel and parallel states was within statistical uncertainty. Negative stain electron microscopy of mature fibrils shows a wide distribution of fiber widths, indicating that polymorphism may extend to the quaternary structure level. Circular dichroism of the fibrils was indicative of β-sheet rich structures in atypical conformations. The Raman spectrum of aggregated p53C was consistent with a mixture of arranged β-sheets and heterogeneous structural elements, which is compatible with the MD findings of an ordered β-sheet nucleus flanked by disordered structure. Structural polymorphism is a common property of amyloids; however, because certain polymorphs of the same protein can be more harmful than others, going forward it will be pertinent to establish correlations between p53C aggregate structure and pathology.
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Yousef EN, Angel LA. Comparison of the pH-dependent formation of His and Cys heptapeptide complexes of nickel(II), copper(II), and zinc(II) as determined by ion mobility-mass spectrometry. JOURNAL OF MASS SPECTROMETRY : JMS 2020; 55:e4489. [PMID: 31881105 DOI: 10.1002/jms.4489] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/28/2019] [Revised: 12/05/2019] [Accepted: 12/13/2019] [Indexed: 06/10/2023]
Abstract
The analog methanobactin (amb) peptide with the sequence ac-His1 -Cys2 -Gly3 -Pro4 -Tyr5 -His6 -Cys7 (amb5A ) will bind the metal ions of zinc, nickel, and copper. To further understand how amb5A binds these metals, we have undertaken a series of studies of structurally related heptapeptides where one or two of the potential His or Cys binding sites have been replaced by Gly, or the C-terminus has been blocked by amidation. The studies were designed to compare how these metals bind to these sequences in different pH solutions of pH 4.2 to 10 and utilized native electrospray ionization (ESI) with ion mobility-mass spectrometry (IM-MS) which allows for the quantitative analysis of the charged species produced during the reactions. The native ESI conditions were chosen to conserve as much of the solution-phase behavior of the amb peptides as possible and an analysis of how the IM-MS results compare with the expected solution-phase behavior is discussed. The oligopeptides studied here have applications for tag-based protein purification methods, as therapeutics for diseases caused by elevated metal ion levels or as inhibitors for metal-protein enzymes such as matrix metalloproteinases.
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Affiliation(s)
- Enas N Yousef
- Department of Chemistry, Texas A&M University-Commerce, Commerce, Texas, 75428, USA
| | - Laurence A Angel
- Department of Chemistry, Texas A&M University-Commerce, Commerce, Texas, 75428, USA
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7
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Torreggiani A, Tinti A, Jurasekova Z, Capdevila M, Saracino M, Di Foggia M. Structural Lesions of Proteins Connected to Lipid Membrane Damages Caused by Radical Stress: Assessment by Biomimetic Systems and Raman Spectroscopy. Biomolecules 2019; 9:E794. [PMID: 31783702 PMCID: PMC6995617 DOI: 10.3390/biom9120794] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2019] [Revised: 11/25/2019] [Accepted: 11/27/2019] [Indexed: 12/16/2022] Open
Abstract
Model systems constituted by proteins and unsaturated lipid vesicles were used to gain more insight into the effects of the propagation of an initial radical damage on protein to the lipid compartment. The latter is based on liposome technology and allows measuring the trans unsaturated fatty acid content as a result of free radical stress on proteins. Two kinds of sulfur-containing proteins were chosen to connect their chemical reactivity with membrane lipid transformation, serum albumins and metallothioneins. Biomimetic systems based on radiation chemistry were used to mimic the protein exposure to different kinds of free radical stress and Raman spectroscopy to shed light on protein structural changes caused by the free radical attack. Among the amino acid residues, Cys is one of the most sensitive residues towards the attack of free radicals, thus suggesting that metal-Cys clusters are good interceptors of reactive species in metallothioneins, together with disulfides moieties in serum albumins. Met is another important site of the attack, in particular under reductive conditions. Tyr and Phe are sensitive to radical stress too, leading to electron transfer reactions or radical-induced modifications of their structures. Finally, modifications in protein folding take place depending on reactive species attacking the protein.
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Affiliation(s)
| | - Anna Tinti
- Dipartimento di Scienze Biomediche e Neuromotorie, Università di Bologna, via Belmeloro 8/2, 40126 Bologna, Italy; (A.T.); (M.D.F.)
| | - Zuzana Jurasekova
- Department of Biophysics, Faculty of Science, P.J. Safarik University, Jesenna 5, 04001 Kosice, Slovakia;
- Center for Interdisciplinary Biosciences, Technology and Innovation Park, P. J. Safarik University, Jesenna 5, 04001 Kosice, Slovakia
| | - Mercè Capdevila
- Departament de Quimica, Facultat de ciencies, Universitat Autònoma de Barcelona, 08193 Bellaterra, Catalonia, Spain;
| | - Michela Saracino
- Istituto I.S.O.F. (C.N.R.), via P. Gobetti 101, 40129 Bologna, Italy;
| | - Michele Di Foggia
- Dipartimento di Scienze Biomediche e Neuromotorie, Università di Bologna, via Belmeloro 8/2, 40126 Bologna, Italy; (A.T.); (M.D.F.)
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8
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Tomàs Giner M, Jiménez-Martí E, Bofill Arasa R, Tinti A, Di Foggia M, Chatgilialoglu C, Torreggiani A. Analysis of the soybean metallothionein system under free radical stress: protein modification connected to lipid membrane damage. Metallomics 2018; 10:1792-1804. [PMID: 30398507 DOI: 10.1039/c8mt00164b] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
Abstract
Metallothioneins are small Cys-rich peptides capable of coordinating metal ions, and proposed to be involved in radical stress. The four Zn(ii)-GmMT complexes of soybean (Glycine max) were recombinantly synthesised and exposed to oxidative (HO˙) and reductive (H˙ atoms and eaq-) stress conditions. Gamma-irradiation was used to simulate the endogenous formation of the reactive species in both aqueous solutions and unsaturated lipid vesicle suspensions, a biomimetic model that showed that tandem protein/lipid damage occurs, in particular under reductive radical stress. This is due to the formation of diffusible sulphur-centred radicals, which migrate from the aqueous phase to the lipid bilayer and are thus able to transform the cis double bond of the oleate moiety into the trans isomer. Among the amino acid residues present in GmMTs, Cys is one of the most sensitive residues towards the attack of free radicals, thus suggesting metal-clusters to be good interceptors of free radicals. Also Met, Tyr and Phe residues are sensitive amino acid sites of attack under both oxidative and reductive conditions. The modification of the Zn(ii)-GmMT complexes, in particular isoform 2, was monitored by Raman spectroscopy and mass spectrometry. Free radical stress on the Zn(ii)-GmMT complexes is able to induce significant structural changes such as partial deconstruction and/or rearrangement of the metal clusters, but not the complete demetallation of the proteins nor breaking of the backbone, thus confirming their capability to act as protectors under free radical stress conditions.
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Affiliation(s)
- Mireia Tomàs Giner
- Dep. Genètica, Facultat de Biologia, Univ. Barcelona, Av. Diagonal 645, 08028 Barcelona, Catalonia, Spain.
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Vieira JCS, Braga CP, de Oliveira G, Padilha CDCF, de Moraes PM, Zara LF, Leite ADL, Buzalaf MAR, Padilha PDM. Mercury Exposure: Protein Biomarkers of Mercury Exposure in Jaraqui Fish from the Amazon Region. Biol Trace Elem Res 2018; 183:164-171. [PMID: 28828596 DOI: 10.1007/s12011-017-1129-5] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 04/10/2017] [Accepted: 08/10/2017] [Indexed: 11/25/2022]
Abstract
This study presents data on the extraction and characterization of proteins associated with mercury in the muscle and liver tissues of jaraqui (Semaprochilodus spp.) from the Madeira River in the Brazilian Amazon. Protein fractionation was carried out by two-dimensional electrophoresis (2D-PAGE). Mercury determination in tissues, pellets, and protein spots was performed by graphite furnace atomic absorption spectrometry (GFAAS). Proteins in the spots that showed mercury were characterized by electrospray ionization tandem mass spectrometry (ESI-MS/MS). The highest mercury concentrations were found in liver tissues and pellets (426 ± 6 and 277 ± 4 μg kg-1), followed by muscle tissues and pellets (132 ± 4 and 86 ± 1 μg kg-1, respectively). Mercury quantification in the protein spots allowed us to propose stoichiometric ratios in the range of 1-4 mercury atoms per molecule of protein in the protein spots. The proteins characterized in the analysis by ESI-MS/MS were keratin, type II cytoskeletal 8, parvalbumin beta, parvalbumin-2, ubiquitin-40S ribosomal S27a, 39S ribosomal protein L36 mitochondrial, hemoglobin subunit beta, and hemoglobin subunit beta-A/B. The results suggest that proteins such as ubiquitin-40S ribosomal protein S27a, which have specific domains, possibly zinc finger, can be used as biomarkers of mercury, whereas mercury and zinc present characteristics of soft acids.
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Affiliation(s)
- José Cavalcante Souza Vieira
- Institute of Bioscience of Botucatu, São Paulo State University (UNESP), Rubião Júnior, Botucatu, São Paulo, 18618-970, Brazil
| | - Camila Pereira Braga
- Institute of Bioscience of Botucatu, São Paulo State University (UNESP), Rubião Júnior, Botucatu, São Paulo, 18618-970, Brazil.
| | - Grasieli de Oliveira
- Institute of Bioscience of Botucatu, São Paulo State University (UNESP), Rubião Júnior, Botucatu, São Paulo, 18618-970, Brazil
| | | | - Paula Martin de Moraes
- Institute of Bioscience of Botucatu, São Paulo State University (UNESP), Rubião Júnior, Botucatu, São Paulo, 18618-970, Brazil
| | | | | | | | - Pedro de Magalhães Padilha
- Institute of Bioscience of Botucatu, São Paulo State University (UNESP), Rubião Júnior, Botucatu, São Paulo, 18618-970, Brazil
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10
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Mercury removal by engineered Escherichia coli cells expressing different rice metallothionein isoforms. ANN MICROBIOL 2018. [DOI: 10.1007/s13213-018-1326-2] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022] Open
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11
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Imam HT, Blindauer CA. Differential reactivity of closely related zinc(II)-binding metallothioneins from the plant Arabidopsis thaliana. J Biol Inorg Chem 2018; 23:137-154. [PMID: 29218630 PMCID: PMC5756572 DOI: 10.1007/s00775-017-1516-6] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/02/2017] [Accepted: 11/12/2017] [Indexed: 12/04/2022]
Abstract
The dynamics of metal binding to and transfer from metalloproteins involved in metal homeostasis are important for understanding cellular distribution of metal ions. The dicotyledonous plant Arabidopsis thaliana has two type 4 seed-specific metallothionein homologues, MT4a and MT4b, with likely roles in zinc(II) homeostasis. These two metallothioneins are 84% identical, with full conservation of all metal-binding cysteine and histidine residues. Yet, differences in their spatial and temporal expression patterns suggested divergence in their biological roles. To investigate whether biological functions are reflected in molecular properties, we compare aspects of zinc(II)-binding dynamics of full-length MT4a and MT4b, namely the pH dependence of zinc(II) binding and protein folding, and zinc(II) transfer to the chelator EDTA. UV-Vis and NMR spectroscopies as well as native electrospray ionisation mass spectrometry consistently showed that transfer from Zn6MT4a is considerably faster than from Zn6MT4b, with pseudo-first-order rate constants for the fastest observed step of k obs = 2.8 × 10-4 s-1 (MT4b) and k obs = 7.5 × 10-4 s-1 (MT4a) (5 µM protein, 500 µM EDTA, 25 mM Tris buffer, pH 7.33, 298 K). 2D heteronuclear NMR experiments allowed locating the most labile zinc(II) ions in domain II for both proteins. 3D homology models suggest that reactivity of this domain is governed by the local environment around the mononuclear Cys2His2 site that is unique to type 4 MTs. Non-conservative amino acid substitutions in this region affect local electrostatics as well as whole-domain dynamics, with both effects rendering zinc(II) ions bound to MT4a more reactive in metal transfer reactions. Therefore, domain II of MT4a is well suited to rapidly release its bound zinc(II) ions, in broad agreement with a previously suggested role of MT4a in zinc(II) transport and delivery to other proteins.
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Affiliation(s)
- Hasan T Imam
- Department of Chemistry, The University of Warwick, Coventry, CV4 7AL, UK
- School of Chemistry, University of St. Andrews, St. Andrews, KY16 9ST, UK
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12
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Hasan MK, Cheng Y, Kanwar MK, Chu XY, Ahammed GJ, Qi ZY. Responses of Plant Proteins to Heavy Metal Stress-A Review. FRONTIERS IN PLANT SCIENCE 2017; 8:1492. [PMID: 28928754 PMCID: PMC5591867 DOI: 10.3389/fpls.2017.01492] [Citation(s) in RCA: 177] [Impact Index Per Article: 25.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/30/2017] [Accepted: 08/11/2017] [Indexed: 05/17/2023]
Abstract
Plants respond to environmental pollutants such as heavy metal(s) by triggering the expression of genes that encode proteins involved in stress response. Toxic metal ions profoundly affect the cellular protein homeostasis by interfering with the folding process and aggregation of nascent or non-native proteins leading to decreased cell viability. However, plants possess a range of ubiquitous cellular surveillance systems that enable them to efficiently detoxify heavy metals toward enhanced tolerance to metal stress. As proteins constitute the major workhorses of living cells, the chelation of metal ions in cytosol with phytochelatins and metallothioneins followed by compartmentalization of metals in the vacuoles as well as the repair of stress-damaged proteins or removal and degradation of proteins that fail to achieve their native conformations are critical for plant tolerance to heavy metal stress. In this review, we provide a broad overview of recent advances in cellular protein research with regards to heavy metal tolerance in plants. We also discuss how plants maintain functional and healthy proteomes for survival under such capricious surroundings.
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Affiliation(s)
- Md. Kamrul Hasan
- Department of Horticulture, Zhejiang UniversityHangzhou, China
- Department of Agricultural Chemistry, Sylhet Agricultural UniversitySylhet, Bangladesh
| | - Yuan Cheng
- State Key Laboratory Breeding Base for Zhejiang Sustainable Pest and Disease Control, Institute of Vegetables, Zhejiang Academy of Agricultural SciencesHangzhou, China
| | | | - Xian-Yao Chu
- Zhejiang Institute of Geological Survey, Geological Research Center for Agricultural Applications, China Geological SurveyBeijing, China
| | | | - Zhen-Yu Qi
- Agricultural Experiment Station, Zhejiang UniversityHangzhou, China
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13
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Vigorito A, Calabrese C, Paltanin E, Melandri S, Maris A. Regarding the torsional flexibility of the dihydrolipoic acid's pharmacophore: 1,3-propanedithiol. Phys Chem Chem Phys 2017; 19:496-502. [PMID: 27905582 DOI: 10.1039/c6cp05606g] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]
Abstract
The great flexibility of 1,3-propanedithiol is probed using freejet absorption microwave spectroscopy and quantum chemistry calculations.
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Affiliation(s)
- Annalisa Vigorito
- Dipartimento di Chimica G. Ciamician
- Università degli Studi di Bologna
- 40126 Bologna
- Italy
| | - Camilla Calabrese
- Dipartimento di Chimica G. Ciamician
- Università degli Studi di Bologna
- 40126 Bologna
- Italy
| | - Ettore Paltanin
- Dipartimento di Chimica G. Ciamician
- Università degli Studi di Bologna
- 40126 Bologna
- Italy
| | - Sonia Melandri
- Dipartimento di Chimica G. Ciamician
- Università degli Studi di Bologna
- 40126 Bologna
- Italy
| | - Assimo Maris
- Dipartimento di Chimica G. Ciamician
- Università degli Studi di Bologna
- 40126 Bologna
- Italy
| |
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