1
|
Perras FA. Elimination of homogeneous broadening in 1H solid-state NMR. Chem Commun (Camb) 2024; 60:6552-6555. [PMID: 38842442 DOI: 10.1039/d4cc02191f] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/07/2024]
Abstract
1H solid-state NMR spectra are plagued by low resolution, necessitating the use of complex pulse sequences or specialized equipment. We introduce a new resolution enhancement method, inspired by super-resolution microscopy, that uses a 2D Hahn-echo experiment to constrain deconvolution. The result is an effective doubling of the MAS frequency.
Collapse
Affiliation(s)
- Frédéric A Perras
- Chemical and Biological Sciences Division, Ames National Laboratory, Ames, IA 50011, USA.
- Department of Chemistry, Iowa State University, Ames, IA 50011, USA
| |
Collapse
|
2
|
Nishiyama Y, Hou G, Agarwal V, Su Y, Ramamoorthy A. Ultrafast Magic Angle Spinning Solid-State NMR Spectroscopy: Advances in Methodology and Applications. Chem Rev 2023; 123:918-988. [PMID: 36542732 PMCID: PMC10319395 DOI: 10.1021/acs.chemrev.2c00197] [Citation(s) in RCA: 42] [Impact Index Per Article: 42.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Abstract
Solid-state NMR spectroscopy is one of the most commonly used techniques to study the atomic-resolution structure and dynamics of various chemical, biological, material, and pharmaceutical systems spanning multiple forms, including crystalline, liquid crystalline, fibrous, and amorphous states. Despite the unique advantages of solid-state NMR spectroscopy, its poor spectral resolution and sensitivity have severely limited the scope of this technique. Fortunately, the recent developments in probe technology that mechanically rotate the sample fast (100 kHz and above) to obtain "solution-like" NMR spectra of solids with higher resolution and sensitivity have opened numerous avenues for the development of novel NMR techniques and their applications to study a plethora of solids including globular and membrane-associated proteins, self-assembled protein aggregates such as amyloid fibers, RNA, viral assemblies, polymorphic pharmaceuticals, metal-organic framework, bone materials, and inorganic materials. While the ultrafast-MAS continues to be developed, the minute sample quantity and radio frequency requirements, shorter recycle delays enabling fast data acquisition, the feasibility of employing proton detection, enhancement in proton spectral resolution and polarization transfer efficiency, and high sensitivity per unit sample are some of the remarkable benefits of the ultrafast-MAS technology as demonstrated by the reported studies in the literature. Although the very low sample volume and very high RF power could be limitations for some of the systems, the advantages have spurred solid-state NMR investigation into increasingly complex biological and material systems. As ultrafast-MAS NMR techniques are increasingly used in multidisciplinary research areas, further development of instrumentation, probes, and advanced methods are pursued in parallel to overcome the limitations and challenges for widespread applications. This review article is focused on providing timely comprehensive coverage of the major developments on instrumentation, theory, techniques, applications, limitations, and future scope of ultrafast-MAS technology.
Collapse
Affiliation(s)
- Yusuke Nishiyama
- JEOL Ltd., Akishima, Tokyo196-8558, Japan
- RIKEN-JEOL Collaboration Center, Yokohama, Kanagawa230-0045, Japan
| | - Guangjin Hou
- State Key Laboratory of Catalysis, Dalian National Laboratory for Clean Energy, 2011-Collaborative Innovation Center of Chemistry for Energy Materials, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Zhongshan Road 457, Dalian116023, China
| | - Vipin Agarwal
- Tata Institute of Fundamental Research, Sy. No. 36/P, Gopanpally, Hyderabad500 046, India
| | - Yongchao Su
- Analytical Research and Development, Merck & Co., Inc., Rahway, New Jersey07065, United States
| | - Ayyalusamy Ramamoorthy
- Biophysics, Department of Chemistry, Biomedical Engineering, Macromolecular Science and Engineering, Michigan Neuroscience Institute, University of Michigan, Ann Arbor, Michigan41809-1055, United States
| |
Collapse
|
3
|
Pawlak T, Paluch P, Dolot R, Bujacz G, Potrzebowski MJ. New salts of teriflunomide (TFM) - Single crystal X-ray and solid state NMR investigation. SOLID STATE NUCLEAR MAGNETIC RESONANCE 2022; 122:101820. [PMID: 36067621 DOI: 10.1016/j.ssnmr.2022.101820] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/01/2022] [Revised: 08/02/2022] [Accepted: 08/09/2022] [Indexed: 06/15/2023]
Abstract
New salts of teriflunomide TFM (drug approved for Multiple Sclerosis treatment) with inorganic counterions: lithium (TFM_Li), sodium (TFM_Na), potassium (TFM_K), rubidium (TFM_Rb), caesium (TFM_Cs) and ammonium (TFM_NH4) were prepared and investigated employing solid state NMR Spectroscopy, Powder X-ray Diffraction PXRD and Single Crystal X-ray Diffraction (SC XRD). Crystal and molecular structures of three salts: TFM_Na (CCDC: 2173257), TFM_Cs (CCDC: 2165288) and TFM_NH4 (CCDC: 2165281) were determined and deposited. Compared to the native TFM, for all crystalline salt structures, a conformational change of the teriflunomide molecule involving about 180-degree rotation of the end group, forming an intramolecular hydrogen bond N-H⋯O is observed. By applying a complementary multi-technique approach, employing 1D and 2D solid state MAS NMR techniques, single and powder X-ray diffraction measurements, as well as the DFT-based GIPAW calculations of NMR chemical shifts for TFM_Na and TFM_Cs allowed to propose structural features of TFM_Li for which it was not possible to obtain adequate material for single crystal X-Ray measurement.
Collapse
Affiliation(s)
- Tomasz Pawlak
- Centre of Molecular and Macromolecular Studies, Polish Academy of Sciences, Sienkiewicza 112, 90-363, Lodz, Poland.
| | - Piotr Paluch
- Centre of Molecular and Macromolecular Studies, Polish Academy of Sciences, Sienkiewicza 112, 90-363, Lodz, Poland
| | - Rafał Dolot
- Centre of Molecular and Macromolecular Studies, Polish Academy of Sciences, Sienkiewicza 112, 90-363, Lodz, Poland
| | - Grzegorz Bujacz
- Institute of Molecular and Industrial Biotechnology, Lodz University of Technology, Stefanowskiego 4/10, 90-924, Lodz, Poland
| | - Marek J Potrzebowski
- Centre of Molecular and Macromolecular Studies, Polish Academy of Sciences, Sienkiewicza 112, 90-363, Lodz, Poland
| |
Collapse
|
4
|
Khalaji M, Paluch P, Potrzebowski MJ, Dudek MK. Narrowing down the conformational space with solid-state NMR in crystal structure prediction of linezolid cocrystals. SOLID STATE NUCLEAR MAGNETIC RESONANCE 2022; 121:101813. [PMID: 35964358 DOI: 10.1016/j.ssnmr.2022.101813] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/30/2022] [Revised: 07/28/2022] [Accepted: 07/28/2022] [Indexed: 06/15/2023]
Abstract
Many solids crystallize as microcrystalline powders, thus precluding the application of single crystal X-Ray diffraction in structural elucidation. In such cases, a joint use of high-resolution solid-state NMR and crystal structure prediction (CSP) calculations can be successful. However, for molecules showing significant conformational freedom, the CSP-NMR protocol can meet serious obstacles, including ambiguities in NMR signal assignment and too wide conformational search space to be covered by computational methods in reasonable time. Here, we demonstrate a possible way of avoiding these obstacles and making as much use of the two methods as possible in difficult circumstances. In a simple case, our experiments led to crystal structure elucidation of a cocrystal of linezolid (LIN), a wide-range antibiotic, with 2,3-dihydroxybenzoic acid, while a significantly more challenging case of a cocrystal of LIN with 2,4-dihydroxybenzoic acid led to the identification of the most probable conformations of LIN inside the crystal. Having four rotatable bonds, some of which can assume many discreet values, LIN molecule poses a challenge in establishing its conformation in a solid phase. In our work, a set of 27 conformations were used in CSP calculations to yield model crystal structures to be examined against experimental solid-state NMR data, leading to a reliable identification of the most probable molecular arrangements.
Collapse
Affiliation(s)
- Mehrnaz Khalaji
- Centre of Molecular and Macromolecular Studies, Polish Academy of Sciences, Sienkiewicza 112, Lodz, 90-363, Poland
| | - Piotr Paluch
- Centre of Molecular and Macromolecular Studies, Polish Academy of Sciences, Sienkiewicza 112, Lodz, 90-363, Poland
| | - Marek J Potrzebowski
- Centre of Molecular and Macromolecular Studies, Polish Academy of Sciences, Sienkiewicza 112, Lodz, 90-363, Poland
| | - Marta K Dudek
- Centre of Molecular and Macromolecular Studies, Polish Academy of Sciences, Sienkiewicza 112, Lodz, 90-363, Poland.
| |
Collapse
|
5
|
Chotera‐Ouda A, Jeziorna A, Kaźmierski S, Dolot R, Dudek MK, Potrzebowski MJ. “Crystal memory” Affects the Properties of Peptide Hydrogels – The Case of the Cyclic Tyr‐Tyr dipeptide. Chemistry 2022; 28:e202202005. [DOI: 10.1002/chem.202202005] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2022] [Indexed: 12/23/2022]
Affiliation(s)
- Agata Chotera‐Ouda
- Centre of Molecular and Macromolecular Studies Polish Academy of Sciences Sienkiewicza 112 90-363 Lodz Poland
| | - Agata Jeziorna
- Centre of Molecular and Macromolecular Studies Polish Academy of Sciences Sienkiewicza 112 90-363 Lodz Poland
- Lodz Institute of Technology Łukasiewicz Research Network M. Sklodowskiej-Curie 19/27 90-570 Lodz Poland
| | - Sławomir Kaźmierski
- Centre of Molecular and Macromolecular Studies Polish Academy of Sciences Sienkiewicza 112 90-363 Lodz Poland
| | - Rafał Dolot
- Centre of Molecular and Macromolecular Studies Polish Academy of Sciences Sienkiewicza 112 90-363 Lodz Poland
| | - Marta K. Dudek
- Centre of Molecular and Macromolecular Studies Polish Academy of Sciences Sienkiewicza 112 90-363 Lodz Poland
| | - Marek J. Potrzebowski
- Centre of Molecular and Macromolecular Studies Polish Academy of Sciences Sienkiewicza 112 90-363 Lodz Poland
| |
Collapse
|
6
|
Tognetti J, Franks WT, Lewandowski JR, Brown SP. Optimisation of 1H PMLG homonuclear decoupling at 60 kHz MAS to enable 15N- 1H through-bond heteronuclear correlation solid-state NMR spectroscopy. Phys Chem Chem Phys 2022; 24:20258-20273. [PMID: 35975627 PMCID: PMC9429863 DOI: 10.1039/d2cp01041k] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/03/2022] [Accepted: 07/15/2022] [Indexed: 11/21/2022]
Abstract
The Lee-Goldburg condition for homonuclear decoupling in 1H magic-angle spinning (MAS) solid-state NMR sets the angle θ, corresponding to arctan of the ratio of the rf nutation frequency, ν1, to the rf offset, to be the magic angle, θm, equal to tan-1(√2) = 54.7°. At 60 kHz MAS, we report enhanced decoupling compared to MAS alone in a 1H spectrum of 15N-glycine with at θ = 30° for a ν1 of ∼100 kHz at a 1H Larmor frequency, ν0, of 500 MHz and 1 GHz, corresponding to a high chemical shift scaling factor (λCS) of 0.82. At 1 GHz, we also demonstrate enhanced decoupling compared to 60 kHz MAS alone for a lower ν1 of 51 kHz, i.e., a case where the nutation frequency is less than the MAS frequency, with θ = 18°, λCS = 0.92. The ratio of the rotor period to the decoupling cycle time, Ψ = τr/τc, is in the range 0.53 to 0.61. Windowed decoupling using the optimised parameters for a ν1 of ∼100 kHz also gives good performance in a 1H spin-echo experiment, enabling implementation in a 1H-detected 15N-1H cross polarisation (CP)-refocused INEPT heteronuclear correlation NMR experiment. Specifically, initial 15N transverse magnetisation as generated by 1H-15N CP is transferred back to 1H using a refocused INEPT pulse sequence employing windowed 1H decoupling. Such an approach ensures the observation of through-bond N-H connectivities. For 15N-glycine, while the CP-refocused INEPT experiment has a lower sensitivity (∼50%) as compared to a double CP experiment (with a 200 μs 15N to 1H CP contact time), there is selectivity for the directly bonded NH3+ moiety, while intensity is observed for the CH21H resonances in the double CP experiment. Two-dimensional 15N-1H correlation MAS NMR spectra are presented for the dipeptide β-AspAla and the pharmaceutical cimetidine at 60 kHz MAS, both at natural isotopic abundance. For the dipeptide β-AspAla, different build-up dependence on the first spin-echo duration is observed for the NH and NH3+ moieties demonstrating that the experiment could be used to distinguish resonances for different NHx groups.
Collapse
Affiliation(s)
- Jacqueline Tognetti
- Department of Chemistry, University of Warwick, Coventry CV4 7AL, UK
- Department of Physics, University of Warwick, Coventry CV4 7AL, UK.
| | - W Trent Franks
- Department of Chemistry, University of Warwick, Coventry CV4 7AL, UK
- Department of Physics, University of Warwick, Coventry CV4 7AL, UK.
| | | | - Steven P Brown
- Department of Physics, University of Warwick, Coventry CV4 7AL, UK.
| |
Collapse
|
7
|
Bayzou R, Trébosc J, Hung I, Gan Z, Lafon O, Amoureux JP. Indirect NMR detection via proton of nuclei subject to large anisotropic interactions, such as 14N, 195Pt, and 35Cl, using the T-HMQC sequence. J Chem Phys 2022; 156:064202. [DOI: 10.1063/5.0082700] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022] Open
Affiliation(s)
- Racha Bayzou
- Univ. Lille, CNRS, Centrale Lille, Univ. Artois, UMR 8181–UCCS–Unité de Catalyse et Chimie du Solide, 59000 Lille, France
| | - Julien Trébosc
- Univ. Lille, CNRS, INRAE, Centrale Lille, Univ. Artois, FR 2638–IMEC–Fédération Chevreul, 59000 Lille, France
| | - Ivan Hung
- National High Magnetic Field Laboratory, 1800 East Paul Dirac Drive, Tallahassee, Florida 32310, USA
| | - Zhehong Gan
- National High Magnetic Field Laboratory, 1800 East Paul Dirac Drive, Tallahassee, Florida 32310, USA
| | - Olivier Lafon
- Univ. Lille, CNRS, Centrale Lille, Univ. Artois, UMR 8181–UCCS–Unité de Catalyse et Chimie du Solide, 59000 Lille, France
| | - Jean-Paul Amoureux
- Univ. Lille, CNRS, Centrale Lille, Univ. Artois, UMR 8181–UCCS–Unité de Catalyse et Chimie du Solide, 59000 Lille, France
- Riken NMR Science and Development Division, Yokohama-shi 230-0045, Kanagawa, Japan
- Bruker Biospin, 34 rue de l’industrie, 67166 Wissembourg, France
| |
Collapse
|
8
|
Pawlak T, Oszajca M, Szczesio M, Potrzebowski MJ. Solid-State Study of the Structure, Dynamics, and Thermal Processes of Safinamide Mesylate─A New Generation Drug for the Treatment of Neurodegenerative Diseases. Mol Pharm 2021; 19:287-302. [PMID: 34856803 PMCID: PMC8728732 DOI: 10.1021/acs.molpharmaceut.1c00779] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
![]()
Safinamide mesylate
(SM), the pure active pharmaceutical
ingredient (API) recently used in Parkinson disease treatment, recrystallized
employing water–ethanol mixture of solvents (vol/vol 1:9) gives
a different crystallographic form compared to SM in Xadago
tablets. Pure SM crystallizes as a hemihydrate in the
monoclinic system with the P21 space group.
Its crystal and molecular structure were determined by means of cryo
X-ray crystallography at 100 K. SM in the Xadago tablet
exists in anhydrous form in the orthorhombic crystallographic system
with the P212121 space group. The water migration and thermal processes in the crystal
lattice were monitored by solid-state NMR spectroscopy, differential
scanning calorimetry, and thermogravimetric analysis. SM in Xadago in the high-humidity environment undergoes phase transformation
to the P21 form which can be easily reversed
just by heating up to 80 °C. For the commercial form of the API,
there is also a reversible thermal transformation observed between Z′ = 1 ↔ Z′ = 3 crystallographic
forms in the 0–20 °C temperature range. Analysis of molecular
motion in the crystal lattice proves that the observed conformational
polymorphism is forced by intramolecular dynamics. All above-mentioned
processes were analyzed and described employing the NMR crystallography
approach with the support of advanced theoretical calculations.
Collapse
Affiliation(s)
- Tomasz Pawlak
- Centre of Molecular and Macromolecular Studies, Polish Academy of Sciences, Sienkiewicza 112, 90-363 Lodz, Poland
| | - Marcin Oszajca
- Faculty of Chemistry, Jagiellonian University, Gronostajowa 2, 30-387 Krakow, Poland
| | - Małgorzata Szczesio
- Institute of General and Ecological Chemistry, Faculty of Chemistry, Lodz University of Technology, Żeromskiego 116, 90-924 Lodz, Poland
| | - Marek J Potrzebowski
- Centre of Molecular and Macromolecular Studies, Polish Academy of Sciences, Sienkiewicza 112, 90-363 Lodz, Poland
| |
Collapse
|
9
|
Single-Crystal X-ray and Solid-State NMR Characterisation of AND-1184 and Its Hydrochloride Form. MATERIALS 2021; 14:ma14237175. [PMID: 34885329 PMCID: PMC8658117 DOI: 10.3390/ma14237175] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/19/2021] [Revised: 11/08/2021] [Accepted: 11/22/2021] [Indexed: 12/05/2022]
Abstract
In this study, we report on a structural investigation of AND-1184, with the chemical name N-[3-[4-(6-fluoro-1,2-benzoxazol-3-yl)piperidin-1-yl]propyl]-3-methylbenzenesulfonamide (MBS), and its hydrochloride form (MBSHCl); AND-1184 is a potential API for the treatment of dementia. The single-crystal X-ray investigation of both forms results in monoclinic crystal systems with P21/c and C2/c symmetry for MBS and MBSHCl, respectively. This solid-state NMR study, combined with quantum-chemical calculations, allowed us to assign all 13C and most 1H signals. The MBS structure was defined as a completely rigid system without significant dynamic behaviours, whereas MBSHCl exhibited limited dynamic motion of the aromatic part of the molecule.
Collapse
|
10
|
Buntkowsky G, Döller S, Haro-Mares N, Gutmann T, Hoffmann M. Solid-state NMR studies of non-ionic surfactants confined in mesoporous silica. Z PHYS CHEM 2021. [DOI: 10.1515/zpch-2021-3132] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]
Abstract
Abstract
This review gives an overview of current trends in the investigation of confined molecules such as higher alcohols, ethylene glycol and polyethylene glycol as guest molecules in neat and functionalized mesoporous silica materials. All these molecules have both hydrophobic and hydrophilic parts. They are characteristic role-models for the investigation of confined surfactants. Their properties are studied by a combination of solid-state NMR and relaxometry with other physicochemical techniques and molecular dynamics techniques. It is shown that this combination delivers unique insights into the structure, arrangement, dynamical properties and the guest-host interactions inside the confinement.
Collapse
Affiliation(s)
- Gerd Buntkowsky
- Eduard-Zintl-Institut für Anorganische und Physikalische Chemie , Technische Universität Darmstadt , Alarich-Weiss-Str. 8 , D-64287 Darmstadt , Germany
| | - Sonja Döller
- Eduard-Zintl-Institut für Anorganische und Physikalische Chemie , Technische Universität Darmstadt , Alarich-Weiss-Str. 8 , D-64287 Darmstadt , Germany
| | - Nadia Haro-Mares
- Eduard-Zintl-Institut für Anorganische und Physikalische Chemie , Technische Universität Darmstadt , Alarich-Weiss-Str. 8 , D-64287 Darmstadt , Germany
| | - Torsten Gutmann
- Eduard-Zintl-Institut für Anorganische und Physikalische Chemie , Technische Universität Darmstadt , Alarich-Weiss-Str. 8 , D-64287 Darmstadt , Germany
| | - Markus Hoffmann
- Department of Chemistry and Biochemistry , State University of New York College at Brockport , Brockport , NY , 14420 , USA
| |
Collapse
|
11
|
Nagashima H, Trébosc J, Kon Y, Lafon O, Amoureux JP. Efficient transfer of DNP-enhanced 1 H magnetization to half-integer quadrupolar nuclei in solids at moderate spinning rate. MAGNETIC RESONANCE IN CHEMISTRY : MRC 2021; 59:920-939. [PMID: 33300128 DOI: 10.1002/mrc.5121] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/08/2020] [Revised: 12/02/2020] [Accepted: 12/05/2020] [Indexed: 06/12/2023]
Abstract
We show herein how the proton magnetization enhanced by dynamic nuclear polarization (DNP) can be efficiently transferred at moderate magic-angle spinning (MAS) frequencies to half-integer quadrupolar nuclei, S ≥ 3/2, using the Dipolar-mediated Refocused Insensitive Nuclei Enhanced by Polarization Transfer (D-RINEPT) technique, in which a symmetry-based SR 4 1 2 recoupling scheme built from adiabatic inversion 1 H pulses reintroduces the 1 H-S dipolar couplings, while suppressing the 1 H-1 H ones. The use of adiabatic pulses also improves the robustness to offsets and radiofrequency (rf)-field inhomogeneity. Furthermore, the efficiency of the polarization transfer is further improved by using 1 H composite pulses and continuous-wave irradiations between the recoupling blocks, as well as by manipulating the S satellite transitions during the first recoupling block. Furthermore, in the case of large 1 H-S dipolar couplings, the D-RINEPT variant with two pulses on the quadrupolar channel results in an improved transfer efficiency. We compare here the performances of this new adiabatic scheme with those of its parent version with single π pulses, as well as with those of PRESTO and CPMAS transfers. This comparison is performed using simulations as well as DNP-enhanced 27 Al, 95 Mo, and 17 O NMR experiments on isotopically unmodified γ-alumina, hydrated titania-supported MoO3 , Mg(OH)2 , and l-histidine·HCl·H2 O. The introduced RINEPT method outperforms the existing methods, both in terms of efficiency and robustness to rf-field inhomogeneity and offset.
Collapse
Affiliation(s)
- Hiroki Nagashima
- Interdisciplinary Research Center for Catalytic Chemistry, National Institute of Advanced Industrial Science and Technology (AIST), 1-1-1 Higashi, Tsukuba, Ibaraki 305-8565, Japan
| | - Julien Trébosc
- Univ. Lille, CNRS, Centrale Lille, Univ. Artois, UMR 8181-UCCS-Unité de Catalyse et de Chimie du Solide, Lille, France
- Univ. Lille, CNRS, INRAE, Centrale Lille, Univ. Artois, FR 2638 - IMEC - Institut Michel-Eugène Chevreul, Lille, France
| | - Yoshihiro Kon
- Interdisciplinary Research Center for Catalytic Chemistry, National Institute of Advanced Industrial Science and Technology (AIST), 1-1-1 Higashi, Tsukuba, Ibaraki 305-8565, Japan
| | - Olivier Lafon
- Univ. Lille, CNRS, Centrale Lille, Univ. Artois, UMR 8181-UCCS-Unité de Catalyse et de Chimie du Solide, Lille, France
- Institut Universitaire de France, France
| | - Jean-Paul Amoureux
- Univ. Lille, CNRS, Centrale Lille, Univ. Artois, UMR 8181-UCCS-Unité de Catalyse et de Chimie du Solide, Lille, France
- Bruker BioSpin, Wissembourg, France
- NMR Science and Development Division, Riken, Yokohama, Japan
| |
Collapse
|
12
|
Zheng M, Xin S, Wang Q, Trébosc J, Xu J, Qi G, Feng N, Lafon O, Deng F. Through-space 11 B- 27 Al correlation: Influence of the recoupling channel. MAGNETIC RESONANCE IN CHEMISTRY : MRC 2021; 59:1062-1076. [PMID: 33847409 DOI: 10.1002/mrc.5163] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/02/2020] [Revised: 03/27/2021] [Accepted: 04/08/2021] [Indexed: 06/12/2023]
Abstract
Through-space heteronuclear correlation (D-HETCOR) experiments based on heteronuclear multiple-quantum correlation (D-HMQC) and refocused insensitive nuclei enhanced by polarization transfer (D-RINEPT) sequences have been proven to be useful approaches for the detection of the spatial proximity between half-integer quadrupolar nuclei in solids under magic-angle spinning (MAS) conditions. The corresponding pulse sequences employ coherence transfers mediated by heteronuclear dipolar interactions, which are reintroduced under MAS by radiofrequency irradiation of only one of the two correlated nuclei. We investigate herein using numerical simulations of spin dynamics and solid-state NMR experiments on magnesium aluminoborate glass how the choice of the channel to which the heteronuclear dipolar recoupling is applied affects the transfer efficiency of D-HMQC and D-RINEPT sequences between 11 B and 27 Al nuclei. Experimental results show that maximum transfer efficiency is achieved when the recoupling scheme is applied to the channel, for which the spin magnetization is parallel to the B0 axis in average.
Collapse
Affiliation(s)
- Mingji Zheng
- State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, National Centre for Magnetic Resonance in Wuhan, Wuhan Institute of Physics and Mathematics, Innovation Academy for Precision Measurement Science and Technology, Chinese Academy of Sciences, Wuhan, 430071, China
- University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Shaohui Xin
- State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, National Centre for Magnetic Resonance in Wuhan, Wuhan Institute of Physics and Mathematics, Innovation Academy for Precision Measurement Science and Technology, Chinese Academy of Sciences, Wuhan, 430071, China
- Wanhua Chemical Group Co., Ltd, Yantai, China
| | - Qiang Wang
- State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, National Centre for Magnetic Resonance in Wuhan, Wuhan Institute of Physics and Mathematics, Innovation Academy for Precision Measurement Science and Technology, Chinese Academy of Sciences, Wuhan, 430071, China
| | - Julien Trébosc
- Unité de Catalyse et de Chimie du Solide (UCCS), Univ. Lille, CNRS, Centrale Lille, Univ. Artois, UMR 8181, Lille, F-59000, France
- Institut Michel-Eugène Chevreul (IMEC),Univ. Lille, CNRS, INRA, Centrale Lille, Univ. Artois, FR 2638 - IMEC, Lille, F-59000, France
| | - Jun Xu
- State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, National Centre for Magnetic Resonance in Wuhan, Wuhan Institute of Physics and Mathematics, Innovation Academy for Precision Measurement Science and Technology, Chinese Academy of Sciences, Wuhan, 430071, China
| | - Guodong Qi
- State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, National Centre for Magnetic Resonance in Wuhan, Wuhan Institute of Physics and Mathematics, Innovation Academy for Precision Measurement Science and Technology, Chinese Academy of Sciences, Wuhan, 430071, China
| | - Ningdong Feng
- State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, National Centre for Magnetic Resonance in Wuhan, Wuhan Institute of Physics and Mathematics, Innovation Academy for Precision Measurement Science and Technology, Chinese Academy of Sciences, Wuhan, 430071, China
| | - Olivier Lafon
- Unité de Catalyse et de Chimie du Solide (UCCS), Univ. Lille, CNRS, Centrale Lille, Univ. Artois, UMR 8181, Lille, F-59000, France
- Institut Universitaire de France, Paris, 75231, France
| | - Feng Deng
- State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, National Centre for Magnetic Resonance in Wuhan, Wuhan Institute of Physics and Mathematics, Innovation Academy for Precision Measurement Science and Technology, Chinese Academy of Sciences, Wuhan, 430071, China
| |
Collapse
|
13
|
Gómez J, Rankin A, Trébosc J, Pourpoint F, Tsutsumi Y, Nagashima H, Lafon O, Amoureux JP. Improved NMR transfer of magnetization from protons to half-integer spin quadrupolar nuclei at moderate and high magic-angle spinning frequencies. MAGNETIC RESONANCE (GOTTINGEN, GERMANY) 2021; 2:447-464. [PMID: 37904781 PMCID: PMC10539806 DOI: 10.5194/mr-2-447-2021] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/08/2021] [Accepted: 06/01/2021] [Indexed: 11/01/2023]
Abstract
Half-integer spin quadrupolar nuclei are the only magnetic isotopes for the majority of the chemical elements. Therefore, the transfer of polarization from protons to these isotopes under magic-angle spinning (MAS) can provide precious insights into the interatomic proximities in hydrogen-containing solids, including organic, hybrid, nanostructured and biological solids. This transfer has recently been combined with dynamic nuclear polarization (DNP) in order to enhance the NMR signal of half-integer quadrupolar isotopes. However, the cross-polarization transfer lacks robustness in the case of quadrupolar nuclei, and we have recently introduced as an alternative technique a D -RINEPT (through-space refocused insensitive nuclei enhancement by polarization transfer) scheme combining a heteronuclear dipolar recoupling built from adiabatic pulses and a continuous-wave decoupling. This technique has been demonstrated at 9.4 T with moderate MAS frequencies, ν R ≈ 10 -15 kHz, in order to transfer the DNP-enhanced 1 H polarization to quadrupolar nuclei. Nevertheless, polarization transfers from protons to quadrupolar nuclei are also required at higher MAS frequencies in order to improve the 1 H resolution. We investigate here how this transfer can be achieved at ν R ≈ 20 and 60 kHz. We demonstrate that the D -RINEPT sequence using adiabatic pulses still produces efficient and robust transfers but requires large radio-frequency (rf) fields, which may not be compatible with the specifications of most MAS probes. As an alternative, we introduce robust and efficient variants of the D -RINEPT and PRESTO (phase-shifted recoupling effects a smooth transfer of order) sequences using symmetry-based recoupling schemes built from single and composite π pulses. Their performances are compared using the average Hamiltonian theory and experiments at B 0 = 18.8 T on γ -alumina and isopropylamine-templated microporous aluminophosphate (AlPO4 -14), featuring low and significant 1 H-1 H dipolar interactions, respectively. These experiments demonstrate that the 1 H magnetization can be efficiently transferred to 27 Al nuclei using D -RINEPT with SR 4 1 2 (2700 90180 ) recoupling and using PRESTO with R 22 2 7 (1800 ) or R 16 7 6 (2700 90180 ) schemes at ν R = 20 or 62.5 kHz, respectively. The D -RINEPT and PRESTO recoupling schemes complement each other since the latter is affected by dipolar truncation, whereas the former is not. We also analyze the losses during these recoupling schemes, and we show how these magnetization transfers can be used at ν R = 62.5 kHz to acquire in 72 min 2D HETCOR (heteronuclear correlation) spectra between 1 H and quadrupolar nuclei, with a non-uniform sampling (NUS).
Collapse
Affiliation(s)
- Jennifer S. Gómez
- Univ. Lille, CNRS, Centrale Lille, Univ. Artois, UMR 8181 – UCCS – Unité de Catalyse et Chimie du Solide, Lille, 59000, France
| | - Andrew G. M. Rankin
- Univ. Lille, CNRS, Centrale Lille, Univ. Artois, UMR 8181 – UCCS – Unité de Catalyse et Chimie du Solide, Lille, 59000, France
- present address: Sorbonne Université, CNRS, Collège de
France, Laboratoire de Chimie de la Matière Condensée de Paris (LCMCP), 4 place Jussieu, Paris, 75005, France
| | - Julien Trébosc
- Univ. Lille, CNRS, INRAE, Centrale Lille, Univ. Artois, FR 2638 –
IMEC – Fédération Chevreul, Lille, 59000, France
| | - Frédérique Pourpoint
- Univ. Lille, CNRS, Centrale Lille, Univ. Artois, UMR 8181 – UCCS – Unité de Catalyse et Chimie du Solide, Lille, 59000, France
| | - Yu Tsutsumi
- Bruker Japan, 3-9 Moriya, Kanagawa, Yokohama, Kanagawa,
221-0022, Japan
| | - Hiroki Nagashima
- Interdisciplinary Research Center for Catalytic Chemistry, National
Institute of Advanced Industrial Science and Technology (AIST), 1-1-1
Higashi, Tsukuba, Ibaraki, 305-8565, Japan
| | - Olivier Lafon
- Univ. Lille, CNRS, Centrale Lille, Univ. Artois, UMR 8181 – UCCS – Unité de Catalyse et Chimie du Solide, Lille, 59000, France
- Institut Universitaire de France, 1 rue Descartes, Paris, 75231,
France
| | - Jean-Paul Amoureux
- Univ. Lille, CNRS, Centrale Lille, Univ. Artois, UMR 8181 – UCCS – Unité de Catalyse et Chimie du Solide, Lille, 59000, France
- Riken NMR Science and Development Division, Yokohama, Kanagawa, 230-0045, Japan
- Bruker Biospin, 34 rue de l'industrie, Wissembourg, 67166, France
| |
Collapse
|
14
|
Pawlak T, Sudgen I, Bujacz G, Iuga D, Brown SP, Potrzebowski MJ. Synergy of Solid-State NMR, Single-Crystal X-ray Diffraction, and Crystal Structure Prediction Methods: A Case Study of Teriflunomide (TFM). CRYSTAL GROWTH & DESIGN 2021; 21:3328-3343. [PMID: 34267599 PMCID: PMC8273857 DOI: 10.1021/acs.cgd.1c00123] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/01/2021] [Revised: 04/27/2021] [Indexed: 06/13/2023]
Abstract
In this work, for the first time, we present the X-ray diffraction crystal structure and spectral properties of a new, room-temperature polymorph of teriflunomide (TFM), CSD code 1969989. As revealed by DSC, the low-temperature TFM polymorph recently reported by Gunnam et al. undergoes a reversible thermal transition at -40 °C. This reversible process is related to a change in Z' value, from 2 to 1, as observed by variable-temperature 1H-13C cross-polarization (CP) magic-angle spinning (MAS) solid-state NMR, while the crystallographic system is preserved (triclinic). Two-dimensional 13C-1H and 1H-1H double-quantum MAS NMR spectra are consistent with the new room-temperature structure, including comparison with GIPAW (gauge-including projector augmented waves) calculated NMR chemical shifts. A crystal structure prediction procedure found both experimental teriflunomide polymorphs in the energetic global minimum region. Differences between the polymorphs are seen for the torsional angle describing the orientation of the phenyl ring relative to the planarity of the TFM molecule. In the low-temperature structure, there are two torsion angles of 4.5 and 31.9° for the two Z' = 2 molecules, while in the room-temperature structure, there is disorder that is modeled with ∼50% occupancy between torsion angles of -7.8 and 28.6°. These observations are consistent with a broad energy minimum as revealed by DFT calculations. PISEMA solid-state NMR experiments show a reduction in the C-H dipolar coupling in comparison to the static limit for the aromatic CH moieties of 75% and 51% at 20 and 40 °C, respectively, that is indicative of ring flips at the higher temperature. Our study shows the power of combining experiments, namely DSC, X-ray diffraction, and MAS NMR, with DFT calculations and CSP to probe and understand the solid-state landscape, and in particular the role of dynamics, for pharmaceutical molecules.
Collapse
Affiliation(s)
- Tomasz Pawlak
- Centre
of Molecular and Macromolecular Studies, Polish Academy of Sciences, Sienkiewicza 112, 90-363 Lodz, Poland
| | - Isaac Sudgen
- Molecular
Systems Engineering Group, Centre for Process Systems Engineering,
Department of Chemical Engineering, Imperial
College London, London SW7 2AZ, U.K.
| | - Grzegorz Bujacz
- Institute
of Molecular and Industrial Biotechnology, Lodz University of Technology, Stefanowskiego 4/10, 90-924, Lodz, Poland
| | - Dinu Iuga
- Department
of Physics, University of Warwick, Coventry CV4 7AL, U.K.
| | - Steven P. Brown
- Department
of Physics, University of Warwick, Coventry CV4 7AL, U.K.
| | - Marek J. Potrzebowski
- Centre
of Molecular and Macromolecular Studies, Polish Academy of Sciences, Sienkiewicza 112, 90-363 Lodz, Poland
| |
Collapse
|
15
|
Wang Z, Hanrahan MP, Kobayashi T, Perras FA, Chen Y, Engelke F, Reiter C, Purea A, Rossini AJ, Pruski M. Combining fast magic angle spinning dynamic nuclear polarization with indirect detection to further enhance the sensitivity of solid-state NMR spectroscopy. SOLID STATE NUCLEAR MAGNETIC RESONANCE 2020; 109:101685. [PMID: 32932182 DOI: 10.1016/j.ssnmr.2020.101685] [Citation(s) in RCA: 19] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/16/2020] [Revised: 07/24/2020] [Accepted: 07/28/2020] [Indexed: 06/11/2023]
Abstract
Dynamic nuclear polarization (DNP) and indirect detection are two commonly applied approaches for enhancing the sensitivity of solid-state NMR spectroscopy. However, their use in tandem has not yet been investigated. With the advent of low-temperature fast magic angle spinning (MAS) probes with 1.3-mm diameter rotors capable of MAS at 40 kHz it becomes feasible to combine these two techniques. In this study, we performed DNP-enhanced 2D indirectly detected heteronuclear correlation (idHETCOR) experiments on 13C, 15N, 113Cd and 89Y nuclei in functionalized mesoporous silica, CdS nanoparticles, and Y2O3 nanoparticles. The sensitivity of the 2D idHETCOR experiments was compared with those of DNP-enhanced directly-detected 1D cross polarization (CP) and 2D HETCOR experiments performed with a standard 3.2-mm rotor. Due to low CP polarization transfer efficiencies and large proton linewidth, the sensitivity gains achieved by indirect detection alone were lower than in conventional (non-DNP) experiments. Nevertheless, despite the smaller sample volume the 2D idHETCOR experiments showed better absolute sensitivities than 2D HETCOR experiments for nuclei with the lowest gyromagnetic ratios. For 89Y, 2D idHETCOR provided 8.2 times better sensitivity than the 1 D89Y-detected CP experiment performed with a 3.2-mm rotor.
Collapse
Affiliation(s)
- Zhuoran Wang
- U.S. DOE Ames Laboratory, Iowa State University, Ames, IA, 50011-3020, United States; Department of Chemistry, Iowa State University, Ames, IA, 50011-3020, United States
| | - Michael P Hanrahan
- U.S. DOE Ames Laboratory, Iowa State University, Ames, IA, 50011-3020, United States; Department of Chemistry, Iowa State University, Ames, IA, 50011-3020, United States
| | - Takeshi Kobayashi
- U.S. DOE Ames Laboratory, Iowa State University, Ames, IA, 50011-3020, United States
| | - Frédéric A Perras
- U.S. DOE Ames Laboratory, Iowa State University, Ames, IA, 50011-3020, United States
| | - Yunhua Chen
- U.S. DOE Ames Laboratory, Iowa State University, Ames, IA, 50011-3020, United States; Department of Chemistry, Iowa State University, Ames, IA, 50011-3020, United States
| | | | | | - Armin Purea
- Bruker Biospin, 76287, Rheinstetten, Germany
| | - Aaron J Rossini
- U.S. DOE Ames Laboratory, Iowa State University, Ames, IA, 50011-3020, United States; Department of Chemistry, Iowa State University, Ames, IA, 50011-3020, United States.
| | - Marek Pruski
- U.S. DOE Ames Laboratory, Iowa State University, Ames, IA, 50011-3020, United States; Department of Chemistry, Iowa State University, Ames, IA, 50011-3020, United States.
| |
Collapse
|
16
|
Dudek MK, Śniechowska J, Wróblewska A, Kaźmierski S, Potrzebowski MJ. Cocrystals "Divorce and Marriage": When a Binary System Meets an Active Multifunctional Synthon in a Ball Mill. Chemistry 2020; 26:13264-13273. [PMID: 32567718 DOI: 10.1002/chem.202002238] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/05/2020] [Revised: 06/17/2020] [Indexed: 11/06/2022]
Abstract
A well-defined and stable "AB" binary system in the presence of "C" a crystalline synthon ground in a ball mill undergoes selective transformation in the solid state according to the equation AB+C→AC+B. When the amount of C is increased two times then the equation AB+2C→AC+BC is valid. The other variants are more complex. The pathway BC+A is allowed and leads to the AC and B products. The pathway AC+B is not preferred, and no transformation is observed. These non-obvious correlations were observed for cocrystal of barbituric acid (BA):thiobarbituric acid (TBA) recently reported by Shemchuk et al. (Chem. Commun. 2016, 52, 11815-11818) in the presence of 1-hydroxy-4,5-dimethyl-imidazole 3-oxide (HIMO). This synthon shows high affinity for the BA0.5 TBA0.5 cocrystal as well for its individual components, BA and TBA. Single-quantum, double-quantum (SQ-DQ) 2D 1 H very fast MAS NMR with a spinning rate of 60 kHz was employed as a basic and most diagnostic tool for the study of cocrystals transformations. Analysis of the experimental data was supported by theoretical calculations, including computation of the stabilization energy, Estab , defined as the energy difference between the energy of a co-crystal and the sum of the energies of particular components in the respective stoichiometric ratios. Two mechanisms of synthon replacement have been proposed. Pathway 1 assumes a concerted mechanism of substitution. In this approach, synthon attack is synchronized in time with the departure of one of the components of the binary system. Pathway 2 implies a non-concerted process, with an intermediate stage in which three separate components are present. Evidence suggesting a preference for Pathway 2 is shown.
Collapse
Affiliation(s)
- Marta K Dudek
- Division of Structural Studies, Centre of Molecular and Macromolecular Studies, Polish Academy of Sciences, Sienkiewicza 112, 90-363, Łódź, Poland
| | - Justyna Śniechowska
- Division of Structural Studies, Centre of Molecular and Macromolecular Studies, Polish Academy of Sciences, Sienkiewicza 112, 90-363, Łódź, Poland
| | - Aneta Wróblewska
- Division of Structural Studies, Centre of Molecular and Macromolecular Studies, Polish Academy of Sciences, Sienkiewicza 112, 90-363, Łódź, Poland
| | - Sławomir Kaźmierski
- Division of Structural Studies, Centre of Molecular and Macromolecular Studies, Polish Academy of Sciences, Sienkiewicza 112, 90-363, Łódź, Poland
| | - Marek J Potrzebowski
- Division of Structural Studies, Centre of Molecular and Macromolecular Studies, Polish Academy of Sciences, Sienkiewicza 112, 90-363, Łódź, Poland
| |
Collapse
|
17
|
Buntkowsky G, Vogel M. Small Molecules, Non-Covalent Interactions, and Confinement. Molecules 2020; 25:E3311. [PMID: 32708283 PMCID: PMC7397022 DOI: 10.3390/molecules25143311] [Citation(s) in RCA: 22] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/03/2020] [Revised: 07/07/2020] [Accepted: 07/15/2020] [Indexed: 11/27/2022] Open
Abstract
This review gives an overview of current trends in the investigation of small guest molecules, confined in neat and functionalized mesoporous silica materials by a combination of solid-state NMR and relaxometry with other physico-chemical techniques. The reported guest molecules are water, small alcohols, and carbonic acids, small aromatic and heteroaromatic molecules, ionic liquids, and surfactants. They are taken as characteristic role-models, which are representatives for the typical classes of organic molecules. It is shown that this combination delivers unique insights into the structure, arrangement, dynamics, guest-host interactions, and the binding sites in these confined systems, and is probably the most powerful analytical technique to probe these systems.
Collapse
Affiliation(s)
- Gerd Buntkowsky
- Institut für Physikalische Chemie, Technische Universität Darmstadt, 64287 Darmstadt, Germany
| | - Michael Vogel
- Institut für Festkörperphysik, Technische Universität Darmstadt, 64295 Darmstadt, Germany
| |
Collapse
|
18
|
Jayanthi S, Lupulescu A. Sensitivity enhancement in 2D Double Cross Polarization experiments under fast MAS by recycling unused protons. SOLID STATE NUCLEAR MAGNETIC RESONANCE 2020; 107:101652. [PMID: 32155567 DOI: 10.1016/j.ssnmr.2020.101652] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/18/2019] [Revised: 02/09/2020] [Accepted: 02/10/2020] [Indexed: 06/10/2023]
Abstract
We demonstrate sensitivity enhancement via recycling of proton magnetization in 2D Double Cross Polarization (Double CP) experiments performed on fully protonated and uniformly labeled (13C, 15N) samples at a magic angle spinning rate of 60 kHz. Unused proton magnetization is preserved during t1 evolution either by locking it with CW irradiation or by employing rotor-synchronized pi pulses. A flip-back pulse together with a modified second CP block preserves unused proton magnetization resulting in enhanced sensitivity. We have achieved sensitivity enhancements of 15-20% and 25-28% in 1H-13C and 1H-15N 2D Double CP experiments respectively. At shorter recycle delays (∼0.25T1), relative sensitivity enhancements of 40-45% and 55% were obtained in 1H-13C and 1H-15N 2D Double CP experiments respectively. An analysis of the sensitivity enhancements and theoretical estimation of lineshapes in indirect dimension in the presence of proton recycling is provided.
Collapse
Affiliation(s)
- Sundaresan Jayanthi
- Department of Physics, Indian Institute of Space Science and Technology, Valiamala, Thiruvananthapuram, 695 547, Kerala, India
| | | |
Collapse
|
19
|
Dudek MK, Paluch P, Pindelska E. Crystal structures of two furazidin polymorphs revealed by a joint effort of crystal structure prediction and NMR crystallography. ACTA CRYSTALLOGRAPHICA SECTION B, STRUCTURAL SCIENCE, CRYSTAL ENGINEERING AND MATERIALS 2020; 76:322-335. [PMID: 32831253 DOI: 10.1107/s205252062000373x] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/19/2019] [Accepted: 03/12/2020] [Indexed: 06/11/2023]
Abstract
This work presents the crystal structure determination of two elusive polymorphs of furazidin, an antibacterial agent, employing a combination of crystal structure prediction (CSP) calculations and an NMR crystallography approach. Two previously uncharacterized neat crystal forms, one of which has two symmetry-independent molecules (form I), whereas the other one is a Z' = 1 polymorph (form II), crystallize in P21/c and P1 space groups, respectively, and both are built by different conformers, displaying different intermolecular interactions. It is demonstrated that the usage of either CSP or NMR crystallography alone is insufficient to successfully elucidate the above-mentioned crystal structures, especially in the case of the Z' = 2 polymorph. In addition, cases of serendipitous agreement in terms of 1H or 13C NMR data obtained for the CSP-generated crystal structures different from the ones observed in the laboratory (false-positive matches) are analyzed and described. While for the majority of analyzed crystal structures the obtained agreement with the NMR experiment is indicative of some structural features in common with the experimental structure, the mentioned serendipity observed in exceptional cases points to the necessity of caution when using an NMR crystallography approach in crystal structure determination.
Collapse
Affiliation(s)
- Marta K Dudek
- Center of Molecular and Macromolecular Studies, Polish Academy of Sciences, Sienkiewicza 112, Lodz, 90-363, Poland
| | - Piotr Paluch
- Center of Molecular and Macromolecular Studies, Polish Academy of Sciences, Sienkiewicza 112, Lodz, 90-363, Poland
| | - Edyta Pindelska
- Faculty of Pharmacy, Medical University of Warsaw, Banacha 1, Warsaw, 02097, Poland
| |
Collapse
|
20
|
Dudek MK, Paluch P, Śniechowska J, Nartowski KP, Day GM, Potrzebowski MJ. Crystal structure determination of an elusive methanol solvate – hydrate of catechin using crystal structure prediction and NMR crystallography. CrystEngComm 2020. [DOI: 10.1039/d0ce00452a] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/03/2023]
Abstract
A useful short-cut was developed to limit the number of molecular conformations that need to be regarded in crystal structure prediction calculations, which led to the crystal structure determination of new methanol solvate – hydrate of catechin.
Collapse
Affiliation(s)
- Marta K. Dudek
- Centre of Molecular and Macromolecular Studies of Polish Academy of Sciences
- 90-363 Lodz
- Poland
| | - Piotr Paluch
- Centre of Molecular and Macromolecular Studies of Polish Academy of Sciences
- 90-363 Lodz
- Poland
| | - Justyna Śniechowska
- Centre of Molecular and Macromolecular Studies of Polish Academy of Sciences
- 90-363 Lodz
- Poland
| | - Karol P. Nartowski
- Department of Drug Form Technology
- Wroclaw Medical University
- 50-556 Wroclaw
- Poland
| | - Graeme M. Day
- Computational Systems Chemistry
- School of Chemistry
- University of Southampton
- UK
| | - Marek J. Potrzebowski
- Centre of Molecular and Macromolecular Studies of Polish Academy of Sciences
- 90-363 Lodz
- Poland
| |
Collapse
|
21
|
Dudek MK, Wielgus E, Paluch P, Śniechowska J, Kostrzewa M, Day GM, Bujacz GD, Potrzebowski MJ. Understanding the formation of apremilast cocrystals. ACTA CRYSTALLOGRAPHICA SECTION B, STRUCTURAL SCIENCE, CRYSTAL ENGINEERING AND MATERIALS 2019; 75:803-814. [PMID: 32830759 DOI: 10.1107/s205252061900917x] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/24/2019] [Accepted: 06/26/2019] [Indexed: 06/11/2023]
Abstract
Apremilast (APR), an anti-psoriatic agent, easily forms isostructural cocrystals and solvates with aromatic entities, often disobeying at the same time Kitaigorodsky's rule as to the saturation of possible hydrogen-bonding sites. In this paper the reasons for this peculiar behavior are investigated, employing a joint experimental and theoretical approach. This includes the design of cocrystals with coformers having a high propensity towards the formation of both aromatic-aromatic and hydrogen-bonding interactions, determination of their structure, using solid-state NMR spectroscopy and X-ray crystallography, as well as calculations of stabilization energies of formation of the obtained cocrystals, followed by crystal structure prediction calculations and solubility measurements. The findings indicate that the stabilization energies of cocrystal formation are positive in all cases, which results from strain in the APR conformation in these crystal forms. On the other hand, solubility measurements show that the Gibbs free energy of formation of the apremilast:picolinamide cocrystal is negative, suggesting that the formation of the studied cocrystals is entropy driven. This entropic stabilization is associated with the disorder observed in almost all known cocrystals and solvates of APR.
Collapse
Affiliation(s)
- Marta K Dudek
- Centre of Molecular and Macromolecular Studies PAS, Sienkiewicza 112, Lodz, 90363, Poland
| | - Ewelina Wielgus
- Centre of Molecular and Macromolecular Studies PAS, Sienkiewicza 112, Lodz, 90363, Poland
| | - Piotr Paluch
- Centre of Molecular and Macromolecular Studies PAS, Sienkiewicza 112, Lodz, 90363, Poland
| | - Justyna Śniechowska
- Centre of Molecular and Macromolecular Studies PAS, Sienkiewicza 112, Lodz, 90363, Poland
| | - Maciej Kostrzewa
- Centre of Molecular and Macromolecular Studies PAS, Sienkiewicza 112, Lodz, 90363, Poland
| | - Graeme M Day
- Computational Systems Chemistry, School of Chemistry, University of Southampton, Southampton, SO17 1BJ, UK
| | - Grzegorz D Bujacz
- Institute of Technical Biochemistry, Technical University of Lodz, Stefanowskiego 4/10, Lodz, 90-924, Poland
| | - Marek J Potrzebowski
- Centre of Molecular and Macromolecular Studies PAS, Sienkiewicza 112, Lodz, 90363, Poland
| |
Collapse
|
22
|
Paluch P, Rankin AGM, Trébosc J, Lafon O, Amoureux JP. Analysis of HMQC experiments applied to a spin ½ nucleus subject to very large CSA. SOLID STATE NUCLEAR MAGNETIC RESONANCE 2019; 100:11-25. [PMID: 30908976 DOI: 10.1016/j.ssnmr.2019.03.001] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/09/2018] [Revised: 02/28/2019] [Accepted: 03/01/2019] [Indexed: 06/09/2023]
Abstract
The acquisition of solid-state NMR spectra of "heavy" spin I = 1/2 nuclei, such as 119Sn, 195Pt, 199Hg or 207Pb can often prove challenging due to the presence of large chemical shift anisotropy (CSA), which can cause significant broadening of spectral lines. However, previous publications have shown that well-resolved spectra can be obtained via inverse 1H detection using HMQC experiments in combination with fast magic angle spinning. In this work, the efficiencies of different 195Pt excitation schemes are analyzed using SIMPSON numerical simulations and experiments performed on cis- and transplatin samples. These schemes include: hard pulses (HP), selective long pulses (SLP) and rotor-synchronized DANTE trains of pulses. The results show that for spectra of species with very large CSA, HP is little efficient, but that both DANTE and SLP provide efficient excitation profiles over a wide range of CSA values. In particular, it is revealed that the SLP scheme is highly robust to offset, pulse amplitude and length, and is simple to set up. These factors make SLP ideally suited to widespread use by "non-experts" for carrying out analyses of materials containing "heavy" spin I = 1/2 nuclei that are subject to very large CSAs. Finally, the existence of an "intermediate" excitation regime, with an rf-field strength in between those of HP and SLP, which is effective for large CSA, is demonstrated. It must be noted that in some samples, multiple sites may exist with very different CSAs. This is the case for 195Pt species with either square-planar or octahedral structures, with large or small CSA, respectively. These two types of CSAs can only be excited simultaneously with DANTE trains, which scale up the effective rf-field. Another way to obtain all the information is to perform two different experiments: one with SLP and the second with HP to excite the sites with moderate/large and small/moderate CSAs, respectively. These two complementary experiments, recorded with two different spinning speeds, can also be used to discriminate the center-band resonances from the spinning sidebands.
Collapse
Affiliation(s)
- Piotr Paluch
- Centre of Molecular and Macromolecular Studies, Polish Academy of Sciences, Sienkiewicza 112, PL-90 363 Lodz, Poland; Univ. Lille, CNRS 8181, UCCS: Unit of Catalysis and Chemistry of Solids, F-59000 Lille, France.
| | - Andrew G M Rankin
- Univ. Lille, CNRS 8181, UCCS: Unit of Catalysis and Chemistry of Solids, F-59000 Lille, France
| | - Julien Trébosc
- Univ. Lille, CNRS 8181, UCCS: Unit of Catalysis and Chemistry of Solids, F-59000 Lille, France
| | - Olivier Lafon
- Univ. Lille, CNRS 8181, UCCS: Unit of Catalysis and Chemistry of Solids, F-59000 Lille, France; Institut Universitaire de France, 1 Rue Descartes, F-75231 Paris Cedex 05, France
| | - Jean-Paul Amoureux
- Univ. Lille, CNRS 8181, UCCS: Unit of Catalysis and Chemistry of Solids, F-59000 Lille, France; Bruker Biospin, 34 Rue de L'Industrie, F-67166 Wissembourg, France.
| |
Collapse
|
23
|
Duong NT, Yarava JR, Trébosc J, Nishiyama Y, Amoureux JP. Forcing the 'lazy' protons to work. Phys Chem Chem Phys 2018; 20:25829-25840. [PMID: 30285019 DOI: 10.1039/c8cp03601b] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]
Abstract
The combination of cross-polarization (CP) with flip-back (FB) pulse has enabled in NMR the enhancement of 13C sensitivity and the decrease of the recycling delay at both moderate and fast magic-angle spinning (MAS) frequencies. However, only continuous-wave (CW) decoupling is presently compatible with FB-pulse (FB-CW), and depending on the CW radio-frequency (rf) field, either an insignificant sensitivity gain or an acquisition time-dependent gain and a low 13C resolution are obtained. In this study, we propose a new FB-pulse method in which radio frequency-driven recoupling (RFDR) is used as the 1H-13C decoupling scheme to overcome these drawbacks. The performances of FB-RFDR in terms of decoupling efficiency and sensitivity gain are tested on both natural abundance (NA) and uniformly 13C-15N labeled l-histidine·HCl·H2O (Hist) samples at a MAS frequency of νR = 70 kHz. The results show the superiority of RFDR over the CW decoupling with respect to these criteria. Importantly, they reveal that the sensitivity gain offered by FB-RFDR is nearly independent of the decoupling/acquisition duration. The application of FB-RFDR on NA-Hist and sucrose yields a sensitivity gain between 60 and 100% compared to conventional FB-CW and CPMAS-SPINAL experiments. Moreover, we compare the 13C sensitivities of NA-Hist obtained by our 1D FB-RFDR method and 2D 1H-{13C} double-CP acquisition. Both methods provide similar 13C sensitivity and are complementary. Indeed, the 2D method has the advantage of also providing the 1H-13C spatial proximities, but its sensitivity for quaternary carbons is limited; whereas our 1D FB-RFDR method is more independent of the type of carbon, and can provide a 13C 1D spectrum in a shorter experimental time. We also test the feasibility of FB-RFDR at a moderate frequency of νR = 20 kHz, but the experimental results demonstrate a poor resolution as well as a negligible sensitivity gain.
Collapse
Affiliation(s)
- Nghia Tuan Duong
- RIKEN-JEOL Collaboration Center, RIKEN, Yokohama, Kanagawa 230-0045, Japan
| | | | | | | | | |
Collapse
|
24
|
Kupče Ē, Trébosc J, Perrone B, Lafon O, Amoureux JP. Recording 13C- 15N HMQC 2D sparse spectra in solids in 30 s. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 2018; 288:76-83. [PMID: 29438833 DOI: 10.1016/j.jmr.2018.01.018] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/20/2017] [Revised: 01/24/2018] [Accepted: 01/27/2018] [Indexed: 06/08/2023]
Abstract
We propose a dipolar HMQC Hadamard-encoded (D-HMQC-Hn) experiment for fast 2D correlations of abundant nuclei in solids. The main limitation of the Hadamard methods resides in the length of the encoding pulses, which results from a compromise between the selectivity and the sensitivity due to losses. For this reason, these methods should mainly be used with sparse spectra, and they profit from the increased separation of the resonances at high magnetic fields. In the case of the D-HMQC-Hn experiments, we give a simple rule that allows directly setting the optimum length of the selective pulses, versus the minimum separation of the resonances in the indirect dimension. The demonstration has been performed on a fully 13C,15N labelled f-MLF sample, and it allowed recording the build-up curves of the 13C-15N cross-peaks within 10 min. However, the method could also be used in the case of less sensitive samples, but with more accumulations.
Collapse
Affiliation(s)
- Ēriks Kupče
- Bruker UK Limited, Banner Lane, Coventry CV4 9GH, UK
| | - Julien Trébosc
- Univ. Lille, CNRS-8181, UCCS, Unit of Catalysis and Chemistry of Solids, 59000 Lille, France
| | - Barbara Perrone
- Bruker BioSpin AG, Industriestrasse 26, CH-8117 Fällanden, Switzerland
| | - Olivier Lafon
- Univ. Lille, CNRS-8181, UCCS, Unit of Catalysis and Chemistry of Solids, 59000 Lille, France; Institut Universitaire de France, 1, rue Descartes, 75231 Paris Cedex 05, France
| | - Jean-Paul Amoureux
- Univ. Lille, CNRS-8181, UCCS, Unit of Catalysis and Chemistry of Solids, 59000 Lille, France; Bruker Biospin, 34, rue de l'industrie, 67166 Wissembourg, France.
| |
Collapse
|
25
|
Shen M, Wegner S, Trébosc J, Hu B, Lafon O, Amoureux JP. Minimizing the t 1-noise when using an indirect 1H high-resolution detection of unlabeled samples. SOLID STATE NUCLEAR MAGNETIC RESONANCE 2017; 87:111-116. [PMID: 28688541 DOI: 10.1016/j.ssnmr.2017.06.008] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/13/2017] [Revised: 06/25/2017] [Accepted: 06/26/2017] [Indexed: 06/07/2023]
Abstract
The most utilized through-space correlation 1H-{X} methods with proton indirect detection use two consecutive transfers, 1H → X and then X → 1H, with the evolution time t1 in the middle. When the X isotope is not 100% naturally abundant (NA), only the signal of the protons close to these isotopes is modulated by the 1H-X dipolar interactions. This signal is theoretically disentangled with phase-cycling from the un-modulated one. However, this separation is never perfect and it may lead to t1-noise in case of isotopes with very small NA, such as 13C or even worse 15N. One way to reduce this t1-noise is to minimize, 'purge', during t1 the un-modulated 1H magnetization before trying to suppress it with phase-cycling. We analyze experimentally several sequences following the HORROR condition, which allow purging the 1H transverse magnetization. The comparison is made at three spinning speeds, including very fast ones for 1H resolution: 27.75, 55.5 and 111 kHz. We show (i) that the efficiency of this purging process increases with the spinning speed, and (ii) that the best recoupling sequences are the two simplest ones: XY and S1 = SR212. We then compare the S/N that can be achieved with the two most used 1H-{X} 2D methods, called D-HMQC and CP-CP. The only difference in between these two methods is that the transfers are done with either two π/2-pulses on X channel (D-HMQC), or two Cross-Polarization (CP) transfers (CP-CP). The first method, D-HMQC, is very robust and should be preferred when indirectly detecting nuclei with high NA. The second method, CP-CP, (i) requires experimental precautions to limit the t1-noise, and (ii) is difficult to use with quadrupolar nuclei because the two CP transfers are then not efficient nor robust. However, CP-CP is presently the best method to indirectly detect isotopes with small NA, such as 13C and 15N.
Collapse
Affiliation(s)
- M Shen
- Shanghai Key Laboratory of Magnetic Resonance, School of Physics and Materials Science, East China Normal University, Shanghai 200062, PR China
| | - S Wegner
- Bruker BioSpin GmbH, 4 Silberstreifen, 76287 Rheinstetten, Germany
| | - J Trébosc
- Univ. Lille, UMR 8181, UCCS: Unit of Catalysis and Chemistry of Solids, 59000 Lille, France
| | - B Hu
- Shanghai Key Laboratory of Magnetic Resonance, School of Physics and Materials Science, East China Normal University, Shanghai 200062, PR China
| | - O Lafon
- Univ. Lille, UMR 8181, UCCS: Unit of Catalysis and Chemistry of Solids, 59000 Lille, France; Institut Universitaire de France, 1 Rue Descartes, 75231 Paris, France
| | - J P Amoureux
- Univ. Lille, UMR 8181, UCCS: Unit of Catalysis and Chemistry of Solids, 59000 Lille, France; Bruker France, 34 Rue de l'Industrie, 67166 Wissembourg, France.
| |
Collapse
|
26
|
Venkatesh A, Hanrahan MP, Rossini AJ. Proton detection of MAS solid-state NMR spectra of half-integer quadrupolar nuclei. SOLID STATE NUCLEAR MAGNETIC RESONANCE 2017; 84:171-181. [PMID: 28392024 DOI: 10.1016/j.ssnmr.2017.03.005] [Citation(s) in RCA: 58] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/07/2017] [Revised: 03/25/2017] [Accepted: 03/28/2017] [Indexed: 05/09/2023]
Abstract
Fast magic angle spinning (MAS) and proton detection has found widespread application to enhance the sensitivity of solid-state NMR experiments with spin-1/2 nuclei such as 13C, 15N and 29Si, however, this approach is not yet routinely applied to half-integer quadrupolar nuclei. Here we have investigated the feasibility of using fast MAS and proton detection to enhance the sensitivity of solid-state NMR experiments with half-integer quadrupolar nuclei. The previously described dipolar hetero-nuclear multiple quantum correlation (D-HMQC) and dipolar refocused insensitive nuclei enhanced by polarization transfer (D-RINEPT) pulse sequences were used for proton detection of half-integer quadrupolar nuclei. Quantitative comparisons of signal-to-noise ratios and the sensitivity of proton detected D-HMQC and D-RINEPT and direct detection spin echo and quadrupolar Carr-Purcell Meiboom-Gill (QCPMG) solid-state NMR spectra, demonstrate that one dimensional proton detected experiments can provide sensitivity similar to or exceeding that obtainable with direct detection QCPMG experiments. 2D D-HMQC and D-RINEPT experiments provide less sensitivity than QCPMG experiments but proton detected 2D hetero-nuclear correlation solid-state NMR spectra of half-integer nuclei can still be acquired in about the same time as a 1D spin echo spectrum. Notably, the rarely used D-RINEPT pulse sequence is found to provide similar, or better sensitivity than D-HMQC in some cases. Proton detected D-RINEPT benefits from the short longitudinal relaxation times (T1) normally associated with half-integer quadrupolar nuclei, it can be combined with existing signal enhancement methods for quadrupolar nuclei, and t1-noise in the indirect dimension can easily be removed by pre-saturation of the 1H nuclei. The rapid acquisition of proton detected 2D HETCOR solid-state NMR spectra of a range of half-integer quadrupolar nuclei such as 17O, 27Al, 35Cl and 71Ga is demonstrated.
Collapse
Affiliation(s)
- Amrit Venkatesh
- Iowa State University, Department of Chemistry, Ames, IA 50011, USA; US DOE Ames Laboratory, Ames, IA 50011, USA
| | - Michael P Hanrahan
- Iowa State University, Department of Chemistry, Ames, IA 50011, USA; US DOE Ames Laboratory, Ames, IA 50011, USA
| | - Aaron J Rossini
- Iowa State University, Department of Chemistry, Ames, IA 50011, USA; US DOE Ames Laboratory, Ames, IA 50011, USA.
| |
Collapse
|
27
|
Dudek MK, Bujacz G, Potrzebowski MJ. Experimental tests for quality validation of computationally predicted crystal structures – a case of a conformationally flexible procyanidin A-2 dihydrate. CrystEngComm 2017. [DOI: 10.1039/c7ce00618g] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
|
28
|
Gutmann T, Alkhagani S, Rothermel N, Limbach HH, Breitzke H, Buntkowsky G. 31P-Solid-State NMR Characterization and Catalytic Hydrogenation Tests of Novel heterogenized Iridium-Catalysts. ACTA ACUST UNITED AC 2016. [DOI: 10.1515/zpch-2016-0837] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
Abstract
Abstract
The synthesis of novel robust and stable iridium-based immobilized catalysts on silica-polymer hybrid materials (Si-PB-Ir) is described. These catalysts are characterized by a combination of 1D 31P CP-MAS and 2D 31P-1H HETCOR and J-resolved multinuclear solid state NMR experiments. Different binding situations such as singly and multiply coordinated phosphines are identified. Density functional theory (DFT) calculations are performed to corroborate the interpretation of the experimental NMR data, in order to propose a structural model of the heterogenized catalysts. Finally, the catalytic activity of the Si-PB-Ir catalysts is investigated for the hydrogenation of styrene employing para-enriched hydrogen gas.
Collapse
Affiliation(s)
- Torsten Gutmann
- Technische Universität Darmstadt, Eduard-Zintl-Institut für Anorganische und Physikalische Chemie, Alarich-Weiss-Str. 8, D-64287 Darmstadt, Germany
| | - Safaa Alkhagani
- Technische Universität Darmstadt, Eduard-Zintl-Institut für Anorganische und Physikalische Chemie, Alarich-Weiss-Str. 8, D-64287 Darmstadt, Germany
| | - Niels Rothermel
- Technische Universität Darmstadt, Eduard-Zintl-Institut für Anorganische und Physikalische Chemie, Alarich-Weiss-Str. 8, D-64287 Darmstadt, Germany
| | - Hans-Heinrich Limbach
- Freie Universität Berlin, FB Biologie, Chemie, Pharmazie, Takustr. 3, D-14195 Berlin, Germany
| | - Hergen Breitzke
- Technische Universität Darmstadt, Eduard-Zintl-Institut für Anorganische und Physikalische Chemie, Alarich-Weiss-Str. 8, D-64287 Darmstadt, Germany
| | - Gerd Buntkowsky
- Technische Universität Darmstadt, Eduard-Zintl-Institut für Anorganische und Physikalische Chemie, Alarich-Weiss-Str. 8, D-64287 Darmstadt, Germany
| |
Collapse
|
29
|
Nishiyama Y, Malon M, Potrzebowski MJ, Paluch P, Amoureux JP. Accurate NMR determination of C-H or N-H distances for unlabeled molecules. SOLID STATE NUCLEAR MAGNETIC RESONANCE 2016; 73:15-21. [PMID: 26169913 DOI: 10.1016/j.ssnmr.2015.06.005] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/09/2015] [Revised: 06/19/2015] [Accepted: 06/28/2015] [Indexed: 06/04/2023]
Abstract
Cross-Polarization with Variable Contact-time (CP-VC) is very efficient at ultra-fast MAS (νR ≥ 60 kHz) to measure accurately the dipolar interactions corresponding to C-H or N-H short distances, which are very useful for resonance assignment and for analysis of dynamics. Here, we demonstrate the CP-VC experiment with (1)H detection. In the case of C-H distances, we compare the CP-VC signals with direct ((13)C) and indirect ((1)H) detection and find that the latter allows a S/N gain of ca. 2.5, which means a gain of ca. 6 in experimental time. The main powerful characteristics of CP-VC methods are related to the ultra-fast spinning speed and to the fact that most of the time only the value of the dipolar peak separation has to be used to obtain the information. As a result, CP-VC methods are: (i) easy to set up and to use, and robust with respect to (ii) rf-inhomogeneity thus allowing the use of full rotor samples, (iii) rf mismatch, and (iv) offsets and chemical shift anisotropies. It must be noted that the CP-VC 2D method with indirect (1)H detection requires the proton resolution and is thus mainly applicable to small or perdeuterated molecules. We also show that an analysis of the dynamics can even be performed, with a reasonable experimental time, on unlabeled samples with (13)C or even (15)N natural abundance.
Collapse
Affiliation(s)
- Y Nishiyama
- JEOL RESONANCE Inc., Musashino, Akishima, Tokyo 196-8558, Japan; RIKEN CLST-JEOL Collaboration Center, Yokohama, Kanagawa 230-0045, Japan
| | - M Malon
- JEOL RESONANCE Inc., Musashino, Akishima, Tokyo 196-8558, Japan; RIKEN CLST-JEOL Collaboration Center, Yokohama, Kanagawa 230-0045, Japan
| | - M J Potrzebowski
- Polish Academy of Sciences, Centre of Molecular and Macromolecular Studies, 90-363 Lodz, Poland
| | - P Paluch
- Polish Academy of Sciences, Centre of Molecular and Macromolecular Studies, 90-363 Lodz, Poland
| | - J P Amoureux
- Physics Department & Shanghai Key Laboratory of Magnetic Resonance, East China Normal University, Shanghai 200062, China; UCCS, University Lille North of France, Villeneuve d'Ascq 59652, France.
| |
Collapse
|
30
|
Zhang R, Ramamoorthy A. Constant-time 2D and 3D through-bond correlation NMR spectroscopy of solids under 60 kHz MAS. J Chem Phys 2016; 144:034202. [PMID: 26801026 PMCID: PMC4723396 DOI: 10.1063/1.4940029] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/08/2015] [Accepted: 01/04/2016] [Indexed: 12/13/2022] Open
Abstract
Establishing connectivity and proximity of nuclei is an important step in elucidating the structure and dynamics of molecules in solids using magic angle spinning (MAS) NMR spectroscopy. Although recent studies have successfully demonstrated the feasibility of proton-detected multidimensional solid-state NMR experiments under ultrafast-MAS frequencies and obtaining high-resolution spectral lines of protons, assignment of proton resonances is a major challenge. In this study, we first re-visit and demonstrate the feasibility of 2D constant-time uniform-sign cross-peak correlation (CTUC-COSY) NMR experiment on rigid solids under ultrafast-MAS conditions, where the sensitivity of the experiment is enhanced by the reduced spin-spin relaxation rate and the use of low radio-frequency power for heteronuclear decoupling during the evolution intervals of the pulse sequence. In addition, we experimentally demonstrate the performance of a proton-detected pulse sequence to obtain a 3D (1)H/(13)C/(1)H chemical shift correlation spectrum by incorporating an additional cross-polarization period in the CTUC-COSY pulse sequence to enable proton chemical shift evolution and proton detection in the incrementable t1 and t3 periods, respectively. In addition to through-space and through-bond (13)C/(1)H and (13)C/(13)C chemical shift correlations, the 3D (1)H/(13)C/(1)H experiment also provides a COSY-type (1)H/(1)H chemical shift correlation spectrum, where only the chemical shifts of those protons, which are bonded to two neighboring carbons, are correlated. By extracting 2D F1/F3 slices ((1)H/(1)H chemical shift correlation spectrum) at different (13)C chemical shift frequencies from the 3D (1)H/(13)C/(1)H spectrum, resonances of proton atoms located close to a specific carbon atom can be identified. Overall, the through-bond and through-space homonuclear/heteronuclear proximities determined from the 3D (1)H/(13)C/(1)H experiment would be useful to study the structure and dynamics of a variety of chemical and biological solids.
Collapse
Affiliation(s)
- Rongchun Zhang
- Biophysics and Department of Chemistry, The University of Michigan, Ann Arbor, Michigan 48109-1055, USA
| | - Ayyalusamy Ramamoorthy
- Biophysics and Department of Chemistry, The University of Michigan, Ann Arbor, Michigan 48109-1055, USA
| |
Collapse
|
31
|
Veinberg SL, Johnston KE, Jaroszewicz MJ, Kispal BM, Mireault CR, Kobayashi T, Pruski M, Schurko RW. Natural abundance 14N and 15N solid-state NMR of pharmaceuticals and their polymorphs. Phys Chem Chem Phys 2016; 18:17713-30. [DOI: 10.1039/c6cp02855a] [Citation(s) in RCA: 50] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
14N and 15N solid-state NMR at natural abundance are used in tandem for the investigation of pharmaceuticals and their polymorphs.
Collapse
Affiliation(s)
| | | | | | - Brianna M. Kispal
- Department of Chemistry and Biochemistry
- University of Windsor
- Windsor
- Canada
| | | | | | - Marek Pruski
- U.S. DOE Ames Laboratory
- Iowa State University
- Ames
- USA
- Department of Chemistry
| | - Robert W. Schurko
- Department of Chemistry and Biochemistry
- University of Windsor
- Windsor
- Canada
| |
Collapse
|
32
|
Pandey MK, Nishiyama Y. Proton-detected 3D (14)N/(14)N/(1)H isotropic shift correlation experiment mediated through (1)H-(1)H RFDR mixing on a natural abundant sample under ultrafast MAS. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 2015; 258:96-101. [PMID: 26232769 DOI: 10.1016/j.jmr.2015.06.012] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/14/2015] [Revised: 06/22/2015] [Accepted: 06/29/2015] [Indexed: 06/04/2023]
Abstract
In this contribution, we have demonstrated a proton detection-based approach on a natural abundant powdered l-Histidine HCl-H2O sample at ultrafast magic angle spinning (MAS) to accomplish (14)N/(14)N correlation from a 3D (14)N/(14)N/(1)H isotropic shift correlation experiment mediated through (1)H finite-pulse radio frequency-driven recoupling (fp-RFDR). Herein the heteronuclear magnetization transfer between (14)N and (1)H has been achieved by HMQC experiment, whereas (14)N/(14)N correlation is attained through enhanced (1)H-(1)H spin diffusion process due to (1)H-(1)H dipolar recoupling during the RFDR mixing. While the use of ultrafast MAS (90kHz) provides sensitivity enhancement through increased (1)H transverse relaxation time (T2), the use of micro-coil probe which can withstand strong (14)N radio frequency (RF) fields further improves the sensitivity per unit sample volume.
Collapse
Affiliation(s)
- Manoj Kumar Pandey
- RIKEN CLST-JEOL Collaboration Center, RIKEN, Yokohama, Kanagawa 230-0045, Japan
| | - Yusuke Nishiyama
- RIKEN CLST-JEOL Collaboration Center, RIKEN, Yokohama, Kanagawa 230-0045, Japan; JEOL RESONANCE Inc., Musashino, Akishima, Tokyo 196-8558, Japan.
| |
Collapse
|
33
|
Zhang R, Pandey MK, Nishiyama Y, Ramamoorthy A. A Novel High-Resolution and Sensitivity-Enhanced Three-Dimensional Solid-State NMR Experiment Under Ultrafast Magic Angle Spinning Conditions. Sci Rep 2015; 5:11810. [PMID: 26138791 PMCID: PMC4490345 DOI: 10.1038/srep11810] [Citation(s) in RCA: 38] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/08/2015] [Accepted: 05/19/2015] [Indexed: 12/22/2022] Open
Abstract
Although magic angle spinning (MAS) solid-state NMR is a powerful technique to obtain atomic-resolution insights into the structure and dynamics of a variety of chemical and biological solids, poor sensitivity has severely limited its applications. In this study, we demonstrate an approach that suitably combines proton-detection, ultrafast-MAS and multiple frequency dimensions to overcome this limitation. With the utilization of proton-proton dipolar recoupling and double quantum (DQ) coherence excitation/reconversion radio-frequency pulses, very high-resolution proton-based 3D NMR spectra that correlate single-quantum (SQ), DQ and SQ coherences of biological solids have been obtained successfully for the first time. The proposed technique requires a very small amount of sample and does not need multiple radio-frequency (RF) channels. It also reveals information about the proximity between a spin and a certain other dipolar-coupled pair of spins in addition to regular SQ/DQ and SQ/SQ correlations. Although 1H spectral resolution is still limited for densely proton-coupled systems, the 3D technique is valuable to study dilute proton systems, such as zeolites, small molecules, or deuterated samples. We also believe that this new methodology will aid in the design of a plethora of multidimensional NMR techniques and enable high-throughput investigation of an exciting class of solids at atomic-level resolution.
Collapse
Affiliation(s)
- Rongchun Zhang
- Biophysics and Department of Chemistry, University of Michigan, Ann Arbor, MI 48109-1055, USA
| | - Manoj Kumar Pandey
- RIKEN CLST-JEOL collaboration center, RIKEN, Yokohama, Kanagawa 230-0045, Japan
| | - Yusuke Nishiyama
- 1] RIKEN CLST-JEOL collaboration center, RIKEN, Yokohama, Kanagawa 230-0045, Japan [2] JEOL RESONANCE Inc., Musashino, Akishima, Tokyo 196-8558, Japan
| | - Ayyalusamy Ramamoorthy
- Biophysics and Department of Chemistry, University of Michigan, Ann Arbor, MI 48109-1055, USA
| |
Collapse
|
34
|
Komatsu T, Kobayashi T, Hatanaka M, Kikuchi J. Profiling planktonic biomass using element-specific, multicomponent nuclear magnetic resonance spectroscopy. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2015; 49:7056-62. [PMID: 25973714 DOI: 10.1021/acs.est.5b00837] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/10/2023]
Abstract
Planktonic metabolism plays crucial roles in Earth's elemental cycles. Chemical speciation as well as elemental stoichiometry is important for advancing our understanding of planktonic roles in biogeochemical cycles. In this study, a multicomponent solid-state nuclear magnetic resonance (NMR) approach is proposed for chemical speciation of cellular components, using several advanced NMR techniques. Measurements by ssNMR were performed on (13)C and (15)N-labeled Euglena gracilis, a flagellated protist. 3D dipolar-assisted rotational resonance, double-cross-polarization (1)H-(13)C correlation spectroscopy, and (1)H-(13)C solid-state heteronuclear single quantum correlation spectroscopy successively allowed characterization of cellular components. These techniques were then applied to E. gracilis cultured in high and low ammonium media to demonstrate the power of this method for profiling and comparing cellular components. Cellular NMR spectra indicated that ammonium induced both paramylon degradation and amination. Arginine was stored as a nitrogen reserve and ammonium replaced by arginine catabolism via the arginine dihydrolase pathway. (15)N and (31)P cellular ssNMR indicated arginine and polyphosphate accumulation in E. gracilis, respectively. This chemical speciation technique will contribute to environmental research by providing detailed information on environmental chemical properties.
Collapse
Affiliation(s)
- Takanori Komatsu
- †RIKEN Center for Sustainable Resource Science, 1-7-22 Suehiro-cho, Tsurumi-ku, Yokohama 230-0045, Japan
- ‡Graduate School of Medical Life Science, Yokohama City University, 1-7-29 Suehiro-cho, Tsurumi-ku, Yokohama 230-0045, Japan
| | - Toshiya Kobayashi
- ‡Graduate School of Medical Life Science, Yokohama City University, 1-7-29 Suehiro-cho, Tsurumi-ku, Yokohama 230-0045, Japan
| | - Minoru Hatanaka
- §Bruker Biospin K. K., 3-9, Moriya-cho, Kanagawa-ku, Yokohama, 221-0022, Japan
| | - Jun Kikuchi
- †RIKEN Center for Sustainable Resource Science, 1-7-22 Suehiro-cho, Tsurumi-ku, Yokohama 230-0045, Japan
- ‡Graduate School of Medical Life Science, Yokohama City University, 1-7-29 Suehiro-cho, Tsurumi-ku, Yokohama 230-0045, Japan
- ∥Graduate School of Bioagricultural Sciences and School of Agricultural Sciences, Nagoya University, 1 Furo-cho, Chikusa-ku, Nagoya 464-8601, Japan
| |
Collapse
|
35
|
Zhang R, Ramamoorthy A. Dynamics-based selective 2D (1)H/(1)H chemical shift correlation spectroscopy under ultrafast MAS conditions. J Chem Phys 2015; 142:204201. [PMID: 26026440 PMCID: PMC4449354 DOI: 10.1063/1.4921381] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/12/2015] [Accepted: 05/08/2015] [Indexed: 01/30/2023] Open
Abstract
Dynamics plays important roles in determining the physical, chemical, and functional properties of a variety of chemical and biological materials. However, a material (such as a polymer) generally has mobile and rigid regions in order to have high strength and toughness at the same time. Therefore, it is difficult to measure the role of mobile phase without being affected by the rigid components. Herein, we propose a highly sensitive solid-state NMR approach that utilizes a dipolar-coupling based filter (composed of 12 equally spaced 90° RF pulses) to selectively measure the correlation of (1)H chemical shifts from the mobile regions of a material. It is interesting to find that the rotor-synchronized dipolar filter strength decreases with increasing inter-pulse delay between the 90° pulses, whereas the dipolar filter strength increases with increasing inter-pulse delay under static conditions. In this study, we also demonstrate the unique advantages of proton-detection under ultrafast magic-angle-spinning conditions to enhance the spectral resolution and sensitivity for studies on small molecules as well as multi-phase polymers. Our results further demonstrate the use of finite-pulse radio-frequency driven recoupling pulse sequence to efficiently recouple weak proton-proton dipolar couplings in the dynamic regions of a molecule and to facilitate the fast acquisition of (1)H/(1)H correlation spectrum compared to the traditional 2D NOESY (Nuclear Overhauser effect spectroscopy) experiment. We believe that the proposed approach is beneficial to study mobile components in multi-phase systems, such as block copolymers, polymer blends, nanocomposites, heterogeneous amyloid mixture of oligomers and fibers, and other materials.
Collapse
Affiliation(s)
- Rongchun Zhang
- Biophysics and Department of Chemistry, University of Michigan, Ann Arbor, Michigan 48109-1055, USA
| | - Ayyalusamy Ramamoorthy
- Biophysics and Department of Chemistry, University of Michigan, Ann Arbor, Michigan 48109-1055, USA
| |
Collapse
|
36
|
Gu W, Stalzer MM, Nicholas CP, Bhattacharyya A, Motta A, Gallagher JR, Zhang G, Miller JT, Kobayashi T, Pruski M, Delferro M, Marks TJ. Benzene Selectivity in Competitive Arene Hydrogenation: Effects of Single-Site Catalyst···Acidic Oxide Surface Binding Geometry. J Am Chem Soc 2015; 137:6770-80. [DOI: 10.1021/jacs.5b03254] [Citation(s) in RCA: 66] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
Affiliation(s)
- Weixing Gu
- Department
of Chemistry, Northwestern University, Evanston, Illinois 60208, United States
| | - Madelyn Marie Stalzer
- Department
of Chemistry, Northwestern University, Evanston, Illinois 60208, United States
| | - Christopher P. Nicholas
- Exploratory Catalysis Research, UOP LLC, a Honeywell Company, 25 East Algonquin Road, Des Plaines, Illinois 60017, United States
| | - Alak Bhattacharyya
- Exploratory Catalysis Research, UOP LLC, a Honeywell Company, 25 East Algonquin Road, Des Plaines, Illinois 60017, United States
| | - Alessandro Motta
- Dipartimento
di Chimica, Universita’ degli Studi di Roma “La Sapienza” and INSTM UdR Roma, p.le A. Moro 5, I-00185, Roma, Italy
| | - James R. Gallagher
- Chemical
Sciences and Engineering Division, Argonne National Laboratory, Argonne, Illinois 60439 United States
| | - Guanghui Zhang
- Chemical
Sciences and Engineering Division, Argonne National Laboratory, Argonne, Illinois 60439 United States
| | - Jeffrey T. Miller
- Chemical
Sciences and Engineering Division, Argonne National Laboratory, Argonne, Illinois 60439 United States
| | - Takeshi Kobayashi
- U.S.
DOE Ames Laboratory, Iowa State University, Ames, Iowa 50011-3020, United States
| | - Marek Pruski
- U.S.
DOE Ames Laboratory, Iowa State University, Ames, Iowa 50011-3020, United States
- Department
of Chemistry, Iowa State University, Ames, Iowa 50011-3020, United States
| | - Massimiliano Delferro
- Department
of Chemistry, Northwestern University, Evanston, Illinois 60208, United States
| | - Tobin J. Marks
- Department
of Chemistry, Northwestern University, Evanston, Illinois 60208, United States
| |
Collapse
|
37
|
Nishiyama Y, Kobayashi T, Malon M, Singappuli-Arachchige D, Slowing II, Pruski M. Studies of minute quantities of natural abundance molecules using 2D heteronuclear correlation spectroscopy under 100 kHz MAS. SOLID STATE NUCLEAR MAGNETIC RESONANCE 2015; 66-67:56-61. [PMID: 25773137 DOI: 10.1016/j.ssnmr.2015.02.001] [Citation(s) in RCA: 28] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/03/2015] [Revised: 02/05/2015] [Accepted: 02/07/2015] [Indexed: 06/04/2023]
Abstract
Two-dimensional (1)H{(13)C} heteronuclear correlation solid-state NMR spectra of naturally abundant solid materials are presented, acquired using the 0.75-mm magic angle spinning (MAS) probe at spinning rates up to 100 kHz. In spite of the miniscule sample volume (290 nL), high-quality HSQC-type spectra of bulk samples as well as surface-bound molecules can be obtained within hours of experimental time. The experiments are compared with those carried out at 40 kHz MAS using a 1.6-mm probe, which offered higher overall sensitivity due to a larger rotor volume. The benefits of ultrafast MAS in such experiments include superior resolution in (1)H dimension without resorting to (1)H-(1)H homonuclear RF decoupling, easy optimization, and applicability to mass-limited samples. The HMQC spectra of surface-bound species can be also acquired under 100 kHz MAS, although the dephasing of transverse magnetization has significant effect on the efficiency transfer under MAS alone.
Collapse
Affiliation(s)
- Y Nishiyama
- JEOL Resonance Inc., 3-1-2 Musashino, Akishima, Tokyo 196-8558, Japan; RIKEN CLST-JEOL Collaboration Center, Yokohama, Kanagawa 230-0045, Japan.
| | - T Kobayashi
- U.S. DOE Ames Laboratory, Ames, IA 50011-3020, USA
| | - M Malon
- JEOL Resonance Inc., 3-1-2 Musashino, Akishima, Tokyo 196-8558, Japan; RIKEN CLST-JEOL Collaboration Center, Yokohama, Kanagawa 230-0045, Japan
| | - D Singappuli-Arachchige
- U.S. DOE Ames Laboratory, Ames, IA 50011-3020, USA; Department of Chemistry, Iowa State University, Ames, IA 50011-3020, USA
| | - I I Slowing
- U.S. DOE Ames Laboratory, Ames, IA 50011-3020, USA; Department of Chemistry, Iowa State University, Ames, IA 50011-3020, USA
| | - M Pruski
- U.S. DOE Ames Laboratory, Ames, IA 50011-3020, USA; Department of Chemistry, Iowa State University, Ames, IA 50011-3020, USA.
| |
Collapse
|
38
|
Zhang R, Nishiyama Y, Sun P, Ramamoorthy A. Phase cycling schemes for finite-pulse-RFDR MAS solid state NMR experiments. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 2015; 252:55-66. [PMID: 25655451 PMCID: PMC4380770 DOI: 10.1016/j.jmr.2014.12.010] [Citation(s) in RCA: 38] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/13/2014] [Revised: 12/07/2014] [Accepted: 12/17/2014] [Indexed: 05/04/2023]
Abstract
The finite-pulse radio frequency driven dipolar recoupling (fp-RFDR) pulse sequence is used in 2D homonuclear chemical shift correlation experiments under magic angle spinning (MAS). A recent study demonstrated the advantages of using a short phase cycle, XY4, and its super-cycle, XY4(1)4, for the fp-RFDR pulse sequence employed in 2D (1)H/(1)H single-quantum/single-quantum correlation experiments under ultrafast MAS conditions. In this study, we report a comprehensive analysis on the dipolar recoupling efficiencies of XY4, XY4(1)2, XY4(1)3, XY4(1)4, and XY8(1)4 phase cycles under different spinning speeds ranging from 10 to 100 kHz. The theoretical calculations reveal the presence of second-order terms (T(10)T(2,±2), T(1,±1)T(2,±1), etc.) in the recoupled homonuclear dipolar coupling Hamiltonian only when the basic XY4 phase cycle is utilized, making it advantageous for proton-proton magnetization transfer under ultrafast MAS conditions. It is also found that the recoupling efficiency of fp-RFDR is quite dependent on the duty factor (τ180/τR) as well as on the strength of homonuclear dipolar couplings. The rate of longitudinal magnetization transfer increases linearly with the duty factor of fp-RFDR for all the XY-based phase cycles investigated in this study. Examination of the performances of different phase cycles against chemical shift offset and RF field inhomogeneity effects revealed that XY4(1)4 is the most tolerant phase cycle, while the shortest phase cycle XY4 suppressed the RF field inhomogeneity effects most efficiently under slow spinning speeds. Our results suggest that the difference in the fp-RFDR recoupling efficiencies decreases with the increasing MAS speed, while ultrafast (>60 kHz) spinning speed is advantageous as it recouples a large amount of homonuclear dipolar couplings and therefore enable fast magnetization exchange. The effects of higher-order terms and cross terms between various interactions in the effective Hamiltonian of fp-RFDR are also analyzed using numerical simulations for various phase cycles. Results obtained via numerical simulations are in excellent agreement with ultrafast MAS experimental results from the powder samples of glycine and l-alanine.
Collapse
Affiliation(s)
- Rongchun Zhang
- Biophysics and Department of Chemistry, University of Michigan, Ann Arbor, MI 48109-1055, USA
| | - Yusuke Nishiyama
- JEOL RESONANCE Inc., Musashino, Akishima, Tokyo 196-8558, Japan; RIKEN CLST-JEOL Collaboration Center, RIKEN, Yokohama, Kanagawa 230-0045, Japan
| | - Pingchuan Sun
- Key Laboratory of Functional Polymer Materials of Ministry of Education and College of Chemistry, Nankai University, Tianjin 300071, PR China
| | - Ayyalusamy Ramamoorthy
- Biophysics and Department of Chemistry, University of Michigan, Ann Arbor, MI 48109-1055, USA.
| |
Collapse
|
39
|
Paluch P, Pawlak T, Oszajca M, Lasocha W, Potrzebowski MJ. Fine refinement of solid state structure of racemic form of phospho-tyrosine employing NMR Crystallography approach. SOLID STATE NUCLEAR MAGNETIC RESONANCE 2015; 65:2-11. [PMID: 25240460 DOI: 10.1016/j.ssnmr.2014.08.002] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/02/2014] [Accepted: 08/29/2014] [Indexed: 05/25/2023]
Abstract
We present step by step facets important in NMR Crystallography strategy employing O-phospho-dl-tyrosine as model sample. The significance of three major techniques being components of this approach: solid state NMR (SS NMR), X-ray diffraction of powdered sample (PXRD) and theoretical calculations (Gauge Invariant Projector Augmented Wave; GIPAW) is discussed. Each experimental technique provides different set of structural constraints. From the PXRD measurement the size of the unit cell, space group and roughly refined molecular structure are established. SS NMR provides information about content of crystallographic asymmetric unit, local geometry, molecular motion in the crystal lattice and hydrogen bonding pattern. GIPAW calculations are employed for validation of quality of elucidation and fine refinement of structure. Crystal and molecular structure of O-phospho-dl-tyrosine solved by NMR Crystallography is deposited at Cambridge Crystallographic Data Center under number CCDC 1005924.
Collapse
Affiliation(s)
- Piotr Paluch
- Polish Academy of Sciences, Centre of Molecular and Macromolecular Studies, Sienkiewicza 112, PL-90-363 Lodz, Poland
| | - Tomasz Pawlak
- Polish Academy of Sciences, Centre of Molecular and Macromolecular Studies, Sienkiewicza 112, PL-90-363 Lodz, Poland
| | - Marcin Oszajca
- Jerzy Haber Institute of Catalysis and Surface Chemistry, PAS, Niezapominajek 8, 30-239 Krakow, Poland
| | - Wieslaw Lasocha
- Jerzy Haber Institute of Catalysis and Surface Chemistry, PAS, Niezapominajek 8, 30-239 Krakow, Poland; Faculty of Chemistry, Jagiellonian University, Ingardena 3, 30-060 Krakow, Poland
| | - Marek J Potrzebowski
- Polish Academy of Sciences, Centre of Molecular and Macromolecular Studies, Sienkiewicza 112, PL-90-363 Lodz, Poland.
| |
Collapse
|
40
|
Gutmann T, Liu J, Rothermel N, Xu Y, Jaumann E, Werner M, Breitzke H, Sigurdsson ST, Buntkowsky G. Natural abundance 15N NMR by dynamic nuclear polarization: fast analysis of binding sites of a novel amine-carboxyl-linked immobilized dirhodium catalyst. Chemistry 2015; 21:3798-805. [PMID: 25620003 DOI: 10.1002/chem.201405043] [Citation(s) in RCA: 56] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/29/2014] [Indexed: 11/05/2022]
Abstract
A novel heterogeneous dirhodium catalyst has been synthesized. This stable catalyst is constructed from dirhodium acetate dimer (Rh2(OAc)4) units, which are covalently linked to amine- and carboxyl-bifunctionalized mesoporous silica (SBA-15-NH2-COOH). It shows good efficiency in catalyzing the cyclopropanation reaction of styrene and ethyl diazoacetate (EDA) forming cis- and trans-1-ethoxycarbonyl-2-phenylcyclopropane. To characterize the structure of this catalyst and to confirm the successful immobilization, heteronuclear solid-state NMR experiments have been performed. The high application potential of dynamic nuclear polarization (DNP) NMR for the analysis of binding sites in this novel catalyst is demonstrated. Signal-enhanced (13)C CP MAS and (15)N CP MAS techniques have been employed to detect different carboxyl and amine binding sites in natural abundance on a fast time scale. The interpretation of the experimental chemical shift values for different binding sites has been corroborated by quantum chemical calculations on dirhodium model complexes.
Collapse
Affiliation(s)
- Torsten Gutmann
- Institute of Physical Chemistry, Technical University Darmstadt, Alarich-Weiss-Straße 8, 64287 Darmstadt (Germany).
| | | | | | | | | | | | | | | | | |
Collapse
|
41
|
Zhang R, Ramamoorthy A. Performance of RINEPT is amplified by dipolar couplings under ultrafast MAS conditions. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 2014; 243:85-92. [PMID: 24792960 PMCID: PMC4057659 DOI: 10.1016/j.jmr.2014.03.012] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/29/2014] [Revised: 03/27/2014] [Accepted: 03/31/2014] [Indexed: 05/04/2023]
Abstract
The refocused insensitive nuclei enhanced by polarization transfer (RINEPT) technique is commonly used for heteronuclear polarization transfer in solution and solid-state NMR spectroscopy. Suppression of dipolar couplings, either by fast molecular motions in solution or by a combination of MAS and multiple pulse sequences in solids, enables the polarization transfer via scalar couplings. However, the presence of unsuppressed dipolar couplings could alter the functioning of RINEPT, particularly under fast/ultrafast MAS conditions. In this study, we demonstrate, through experiments on rigid solids complemented by numerical simulations, that the polarization transfer efficiency of RINEPT is dependent on the MAS frequency. In addition, we show that heteronuclear dipolar coupling is the dominant factor in the polarization transfer, which is strengthened by the presence of (1)H-(1)H dipolar couplings. In fact, the simultaneous presence of homonuclear and heteronuclear dipolar couplings is the premise for the polarization transfer by RINEPT, whereas the scalar coupling plays an insignificant role under ultrafast MAS conditions on rigid solids. Our results additionally reveal that the polarization transfer efficiency decreases with the increasing duration of RF pulses used in the RINEPT sequence.
Collapse
Affiliation(s)
- Rongchun Zhang
- Biophysics and Department of Chemistry, The University of Michigan, Ann Arbor, MI 48109-1055, USA; School of Physics, Nankai University, Tianjin 300071, PR China
| | - Ayyalusamy Ramamoorthy
- Biophysics and Department of Chemistry, The University of Michigan, Ann Arbor, MI 48109-1055, USA.
| |
Collapse
|
42
|
Pawlak T, Potrzebowski MJ. Fine refinement of solid-state molecular structures of Leu- and Met-enkephalins by NMR crystallography. J Phys Chem B 2014; 118:3298-309. [PMID: 24605867 DOI: 10.1021/jp500379e] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
Abstract
This paper presents a methodology that allows the fine refinement of the crystal and molecular structure for compounds for which the data deposited in the crystallographic bases are of poor quality. Such species belong to the group of samples with molecular disorder. In the Cambridge Crystallographic Data Center (CCDC), there are approximately 22,000 deposited structures with an R-factor over 10. The powerful methodology we present employs crystal data for Leu-enkephalin (two crystallographic forms) with R-factor values of 14.0 and 8.9 and for Met-enkephalin (one form) with an R-factor of 10.5. NMR crystallography was employed in testing the X-ray data and the quality of the structure refinement. The GIPAW (gauge invariant projector augmented wave) method was used to optimize the coordinates of the enkephalins and to compute NMR parameters. As we reveal, this complementary approach makes it possible to generate a reasonable set of new coordinates that better correlate to real samples. This methodology is general and can be employed in the study of each compound possessing magnetically active nuclei.
Collapse
Affiliation(s)
- Tomasz Pawlak
- Centre of Molecular and Macromolecular Studies, Polish Academy of Sciences , Sienkiewicza 112, 90-363 Lodz, Poland
| | | |
Collapse
|
43
|
Althaus SM, Mao K, Stringer JA, Kobayashi T, Pruski M. Indirectly detected heteronuclear correlation solid-state NMR spectroscopy of naturally abundant 15N nuclei. SOLID STATE NUCLEAR MAGNETIC RESONANCE 2014; 57-58:17-21. [PMID: 24287060 DOI: 10.1016/j.ssnmr.2013.11.001] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/05/2013] [Revised: 10/22/2013] [Accepted: 11/01/2013] [Indexed: 06/02/2023]
Abstract
Two-dimensional indirectly detected through-space and through-bond (1)H{(15)N} solid-state NMR experiments utilizing fast magic angle spinning (MAS) and homonuclear multipulse (1)H decoupling are evaluated. Remarkable efficiency of polarization transfer can be achieved at a MAS rate of 40 kHz by both cross-polarization and INEPT, which makes these methods applicable for routine characterizations of natural abundance solids. The first measurement of 2D (1)H{(15)N} HETCOR spectrum of natural abundance surface species is also reported.
Collapse
Affiliation(s)
- Stacey M Althaus
- U.S. DOE Ames Laboratory, Ames, IA 50011-3020, USA; Department of Chemistry, Iowa State University, Ames, IA 50011-3020, USA
| | - Kanmi Mao
- U.S. DOE Ames Laboratory, Ames, IA 50011-3020, USA; Department of Chemistry, Iowa State University, Ames, IA 50011-3020, USA
| | - John A Stringer
- Agilent Technologies, 900 South Taft, Loveland, CO 80537, USA
| | - Takeshi Kobayashi
- Department of Chemistry, Iowa State University, Ames, IA 50011-3020, USA
| | - Marek Pruski
- U.S. DOE Ames Laboratory, Ames, IA 50011-3020, USA; Department of Chemistry, Iowa State University, Ames, IA 50011-3020, USA.
| |
Collapse
|
44
|
Werner M, Rothermel N, Breitzke H, Gutmann T, Buntkowsky G. Recent Advances in Solid State NMR of Small Molecules in Confinement. Isr J Chem 2014. [DOI: 10.1002/ijch.201300095] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
|
45
|
Abdulhussain S, Breitzke H, Ratajczyk T, Grünberg A, Srour M, Arnaut D, Weidler H, Kunz U, Kleebe HJ, Bommerich U, Bernarding J, Gutmann T, Buntkowsky G. Synthesis, Solid-State NMR Characterization, and Application for Hydrogenation Reactions of a Novel Wilkinson’s-Type Immobilized Catalyst. Chemistry 2013; 20:1159-66. [DOI: 10.1002/chem.201303020] [Citation(s) in RCA: 42] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2013] [Indexed: 11/07/2022]
|
46
|
Kharkov BB, Dvinskikh SV. Chain dynamics of surfactants in mesoporous silica. Phys Chem Chem Phys 2013; 15:18620-6. [PMID: 24080836 DOI: 10.1039/c3cp52562g] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Abstract
Mesostructured porous materials possess unique surface, structural, and bulk properties that lead to important practical applications. By retaining structure-directing species in the product material, mesostructured organic-inorganic composites are obtained which are of broad interest for fundamental studies of confinement effects and surface interaction on structural and dynamic properties of organic molecules. In the present study, solid state dipolar (13)C-(1)H NMR spectroscopy is applied to quantitatively characterize the conformational dynamics of organic surfactants in the mesostructured composite CTAB-MCM41. Such an approach does not require assumptions and adjustable parameters and reflects the changes in conformational dynamics without relying on specific motional models. The conformational dynamics of the surfactant confined in solid hexagonal arrays is compared to that in hexagonal aggregates formed in a concentrated aqueous solution. The study showed that in cylindrical pores of hexagonal mesoporous silica the order parameter gradually decreases towards the end of the chain. The degree of order and the order parameter profile is similar to that observed in hexagonal liquid crystalline phases. However, the mobility of segments close to the head group is more restricted compared to that in the mesophase, as the result of interaction with the solid silica interface.
Collapse
Affiliation(s)
- B B Kharkov
- Royal Institute of Technology KTH, Department of Chemistry, Teknikringen 36, SE-10044 Stockholm, Sweden.
| | | |
Collapse
|
47
|
Gutmann T, Grünberg A, Rothermel N, Werner M, Srour M, Abdulhussain S, Tan S, Xu Y, Breitzke H, Buntkowsky G. Solid-state NMR concepts for the investigation of supported transition metal catalysts and nanoparticles. SOLID STATE NUCLEAR MAGNETIC RESONANCE 2013; 55-56:1-11. [PMID: 23972428 DOI: 10.1016/j.ssnmr.2013.06.004] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/23/2013] [Revised: 06/20/2013] [Accepted: 06/21/2013] [Indexed: 05/24/2023]
Abstract
In recent years, solid-state NMR spectroscopy has evolved into an important characterization tool for the study of solid catalysts and chemical processes on their surface. This interest is mainly triggered by the need of environmentally benign organic transformations ("green chemistry"), which has resulted in a large number of new catalytically active hybrid materials, which are organized on the meso- and nanoscale. Typical examples of these catalysts are supported homogeneous transition metal catalysts or transition metal nanoparticles (MNPs). Solid-state NMR spectroscopy is able to characterize both the structures of these materials and the chemical processes on the catalytic surface. This article presents recent trends both on the characterization of immobilized homogeneous transition metal catalysts and on the characterization of surface species on transition metal surfaces.
Collapse
Affiliation(s)
- Torsten Gutmann
- Institute of Physical Chemistry, Technical University Darmstadt, Petersenstrasse 22, D-64287 Darmstadt, Germany
| | | | | | | | | | | | | | | | | | | |
Collapse
|
48
|
Abstract
Abstract
The five-fold coordinated ruthenium (II) catalyst RuCl2(PPh3)3 is heterogenized on the surface of amine functionalized mesoporous silica material SBA-3 and studied by BET, XRD and 31P CP-MAS solid-state NMR. The spectra indicate the replacement of one or two of the triphenyl-phosphine groups in the course of the grafting. To distinguish between both possibilities two-dimensional J-resolved 31P MAS solid-state NMR combined with quantum chemical calculations is employed. The changes of the scalar coupling pattern between the neat catalyst and the immobilized catalyst suggest the replacement of two of the PPh3-groups by coordinative bonds to the amine-functions of the linker. DFT calculations reveal the absence of two chemically and magnetically equivalent phosphines and confirm the replacement of two PPh3-groups. This finding is similar to the results observed for the binding of the rhodium in the Wilkinson's catalyst, despite the different coordination of the metals (four-fold versus five-fold), the presence of two chlorine ligands and the different transition metal.
Collapse
|
49
|
Ghorbanloo M, Jaworska M, Paluch P, Li GD, Zhou LJ. Synthesis, characterization, and catalytic activity for thioanisole oxidation of homogeneous and heterogeneous binuclear manganese(II) complexes with amino acid-based ligands. TRANSIT METAL CHEM 2013. [DOI: 10.1007/s11243-013-9718-4] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
|
50
|
Pawlak T, Paluch P, Trzeciak-Karlikowska K, Jeziorna A, Potrzebowski MJ. Study of the thermal processes in molecular crystals of peptides by means of NMR crystallography. CrystEngComm 2013. [DOI: 10.1039/c3ce40090e] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
|