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Steinbacher SD, Ameen A, Demeter K, Lun D, Derx J, Lindner G, Sommer R, Linke RB, Kolm C, Zuser K, Heckel M, Perschl A, Blöschl G, Blaschke AP, Kirschner AKT, Farnleitner AH. Assessing the impact of inland navigation on the faecal pollution status of large rivers: A novel integrated field approach. WATER RESEARCH 2024; 261:122029. [PMID: 38996728 DOI: 10.1016/j.watres.2024.122029] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/31/2024] [Revised: 06/20/2024] [Accepted: 06/30/2024] [Indexed: 07/14/2024]
Abstract
The contribution of ships to the microbial faecal pollution status of water bodies is largely unknown but frequently of human health concern. No methodology for a comprehensive and target-orientated system analysis was available so far. We developed a novel approach for integrated and multistage impact evaluation. The approach includes, i) theoretical faecal pollution source profiling (PSP, i.e., size and pollution capacity estimation from municipal vs. ship sewage disposal) for impact scenario estimation and hypothesis generation, ii) high-resolution field assessment of faecal pollution levels and chemo-physical water quality at the selected river reaches, using standardized faecal indicators (cultivation-based) and genetic microbial source tracking markers (qPCR-based), and iii) integrated statistical analyses of the observed faecal pollution and the number of ships assessed by satellite-based automated ship tracking (i.e., automated identification system, AIS) at local and regional scales. The new approach was realised at a 230 km long Danube River reach in Austria, enabling detailed understanding of the complex pollution characteristics (i.e., longitudinal/cross-sectional river and upstream/downstream docking area analysis). Faecal impact of navigation was demonstrated to be remarkably low at regional and local scale (despite a high local contamination capacity), indicating predominantly correct disposal practices during the investigated period. Nonetheless, faecal emissions were sensitively traceable, attributable to the ship category (discriminated types: cruise, passenger and freight ships) and individual vessels (docking time analysis) at one docking area by the link with AIS data. The new innovative and sensitive approach is transferrable to any water body worldwide with available ship-tracking data, supporting target-orientated monitoring and evidence-based management practices.
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Affiliation(s)
- Sophia D Steinbacher
- Division Water Quality and Health, Department of Pharmacology, Physiology, and Microbiology, Karl Landsteiner University of Health Sciences, Dr.-Karl-Dorrek-Straße 30, A-3500 Krems an der Donau, Austria; Institute of Chemical, Environmental and Bioscience Engineering, Microbiology and Molecular Diagnostics E166/5/3, TU Wien, Gumpendorferstraße 1a, A-1060 Vienna, Austria
| | - Ahmad Ameen
- Institute of Hydraulic Engineering and Water Resources Management E222, TU Wien, Karlsplatz 13, A-1040 Vienna, Austria
| | - Katalin Demeter
- Institute of Chemical, Environmental and Bioscience Engineering, Microbiology and Molecular Diagnostics E166/5/3, TU Wien, Gumpendorferstraße 1a, A-1060 Vienna, Austria
| | - David Lun
- Institute of Hydraulic Engineering and Water Resources Management E222, TU Wien, Karlsplatz 13, A-1040 Vienna, Austria
| | - Julia Derx
- Institute of Hydraulic Engineering and Water Resources Management E222, TU Wien, Karlsplatz 13, A-1040 Vienna, Austria
| | - Gerhard Lindner
- Institute for Hygiene and Applied Immunology, Water Hygiene, Medical University of Vienna, Kinderspitalgasse 15, A-1090 Vienna, Austria
| | - Regina Sommer
- Institute for Hygiene and Applied Immunology, Water Hygiene, Medical University of Vienna, Kinderspitalgasse 15, A-1090 Vienna, Austria
| | - Rita B Linke
- Institute of Chemical, Environmental and Bioscience Engineering, Microbiology and Molecular Diagnostics E166/5/3, TU Wien, Gumpendorferstraße 1a, A-1060 Vienna, Austria
| | - Claudia Kolm
- Division Water Quality and Health, Department of Pharmacology, Physiology, and Microbiology, Karl Landsteiner University of Health Sciences, Dr.-Karl-Dorrek-Straße 30, A-3500 Krems an der Donau, Austria
| | - Karen Zuser
- Division Water Quality and Health, Department of Pharmacology, Physiology, and Microbiology, Karl Landsteiner University of Health Sciences, Dr.-Karl-Dorrek-Straße 30, A-3500 Krems an der Donau, Austria
| | - Martina Heckel
- Abteilung Wasserwirtschaft (WA2), Government of Lower Austria, A-3109 St. Pölten, Landhausplatz 1, Haus 2, Austria
| | - Andrea Perschl
- Abteilung Wasserwirtschaft (WA2), Government of Lower Austria, A-3109 St. Pölten, Landhausplatz 1, Haus 2, Austria
| | - Günter Blöschl
- Institute of Hydraulic Engineering and Water Resources Management E222, TU Wien, Karlsplatz 13, A-1040 Vienna, Austria
| | - Alfred P Blaschke
- Institute of Hydraulic Engineering and Water Resources Management E222, TU Wien, Karlsplatz 13, A-1040 Vienna, Austria
| | - Alexander K T Kirschner
- Division Water Quality and Health, Department of Pharmacology, Physiology, and Microbiology, Karl Landsteiner University of Health Sciences, Dr.-Karl-Dorrek-Straße 30, A-3500 Krems an der Donau, Austria; Institute for Hygiene and Applied Immunology, Water Microbiology, Medical University of Vienna, Kinderspitalgasse 15, A-1090 Vienna, Austria.
| | - Andreas H Farnleitner
- Division Water Quality and Health, Department of Pharmacology, Physiology, and Microbiology, Karl Landsteiner University of Health Sciences, Dr.-Karl-Dorrek-Straße 30, A-3500 Krems an der Donau, Austria; Institute of Chemical, Environmental and Bioscience Engineering, Microbiology and Molecular Diagnostics E166/5/3, TU Wien, Gumpendorferstraße 1a, A-1060 Vienna, Austria.
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2
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Quero GM, Guicciardi S, Penna P, Catenacci G, Brandinelli M, Bolognini L, Luna GM. Increasing trends in faecal pollution revealed over a decade in the central Adriatic Sea (Italy). WATER RESEARCH 2024; 262:122083. [PMID: 39067273 DOI: 10.1016/j.watres.2024.122083] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/25/2024] [Revised: 07/08/2024] [Accepted: 07/10/2024] [Indexed: 07/30/2024]
Abstract
Faecal contamination of the coastal sea poses widespread hazard to human and environmental health and is predicted to rise in response to global change and human pressure. For better management and risk reduction it is thus imperative to clarify and predict trends of faecal pollution over spatial and temporal scales, and to assess links with climate and other variables. Here, we investigated the spatio-temporal variation in the Faecal Indicator Bacteria (FIB) Escherichia coli and enterococci, over a time frame spanning 11 years (2011-2021) along a coastal area covering approximately 40 km and 59 bathing sites in the Marche region (Adriatic Sea, Italy), characterized by intense beach tourism, high riverine inputs, resident population, maritime traffic and industrial activities. Our analysis, that considers 5,183 measurements during the bathing season (April to October), shows that FIB abundance varied significantly among years. A general, although not significant, increase over time of both FIB was observed, mainly due to a general reduction of structural zeros (i.e., zeros originated from the actual absence of the response variable) over the examined time period. FIB abundances displayed their maxima and minima in different years according to the municipality, with overall peaks recorded in different months (May-June or September), whereas the lowest values were always observed in October. FIB levels were not significantly related neither to rainfalls nor to river discharge, but the activation of combined sewer overflows (CSOs), typically occurring after intense rainfall events, appeared as a necessary condition for the high faecal contamination levels. Considering climate change scenarios predicting significant increases in extreme weather events, our findings support the usefulness of analysing long-term trends to identify pollution sources, and the prioritization of control strategies to better manage the release of microbial pollutants from combined sewer overflows in coastal waters to reduce human risks.
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Affiliation(s)
- Grazia Marina Quero
- Institute of Marine Biological Resources and Biotechnologies, National Research Council (CNR-IRBIM), Ancona, Italy; NBFC, National Biodiversity Future Center, Palermo 90133, Italy
| | - Stefano Guicciardi
- Institute of Marine Biological Resources and Biotechnologies, National Research Council (CNR-IRBIM), Ancona, Italy
| | - Pierluigi Penna
- Institute of Marine Biological Resources and Biotechnologies, National Research Council (CNR-IRBIM), Ancona, Italy
| | | | | | | | - Gian Marco Luna
- Institute of Marine Biological Resources and Biotechnologies, National Research Council (CNR-IRBIM), Ancona, Italy; NBFC, National Biodiversity Future Center, Palermo 90133, Italy.
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3
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Penna A, Marini M, Ferrarin C, Guicciardi S, Grilli F, Baldrighi E, Ricci F, Casabianca S, Capellacci S, Marinchel N, Penna P, Moro F, Campanelli A, Bolognini L, Ordulj M, Krzelj M, Špada V, Bilić J, Sikoronja M, Bujas N, Manini E. Fecal bacteria contamination in the Adriatic Sea: Investigating environmental factors and modeling to manage recreational coastal waters. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2023; 338:122700. [PMID: 37804906 DOI: 10.1016/j.envpol.2023.122700] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/27/2023] [Revised: 09/28/2023] [Accepted: 10/04/2023] [Indexed: 10/09/2023]
Abstract
This study is based on assessing fecal indicator bacteria contamination along meteorological, hydrological and physical-chemical variables after high rainy events during the summer period. The study focused on four different coastal sites in the western and eastern Adriatic coast characterized by various geomorphological and hydrological features, levels of urbanization and anthropogenic pressures, with the aim of finding appropriate and effective solutions to ensure the safety and sustainability of tourism and public health. Detailed in-situ survey revealed a wide range of fecal indicator bacterial (FIB) across the different river mouths with concentrations of E. coli ranging from 165 to 6700 CFU 100 mL-1. It was found that nitrogen compounds track microbial load and acted as tracers for fecal contaminants. Further, a modelling tool was also used to analyze the spatial and temporal distribution of fecal pollution at these coastal sites. The integrated monitoring through high frequent survey in river waters and modeling framework allowed for the estimation of fecal indicator bacterial load at the river mouth and examination of fecal pollutant dispersion in recreational waters, considering different scenarios of fecal dispersion along the coast. This study formed the basis of a robust decision support system aimed at improving the management of recreational areas and ensuring the protection of water bodies through efficient management of bathing areas.
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Affiliation(s)
- Antonella Penna
- Department of Biomolecular Sciences, University of Urbino, 61029, Urbino, Italy; Inter-Institute Center for Research on Marine Biodiversity, Resources and Biotechnologies, 61032, Fano, Italy.
| | - Mauro Marini
- Inter-Institute Center for Research on Marine Biodiversity, Resources and Biotechnologies, 61032, Fano, Italy; Institute of Marine Biological Resources and Biotechnologies - CNR IRBIM, 60125, Ancona, Italy
| | - Christian Ferrarin
- Institute of Marine Sciences - ISMAR, National Research Council - CNR, 30122, Venice, Italy
| | - Stefano Guicciardi
- Institute of Marine Biological Resources and Biotechnologies - CNR IRBIM, 60125, Ancona, Italy
| | - Federica Grilli
- Institute of Marine Biological Resources and Biotechnologies - CNR IRBIM, 60125, Ancona, Italy
| | - Elisa Baldrighi
- Department of Biology, University of Nevada-Reno, 89557, Reno, Nevada, USA
| | - Fabio Ricci
- Department of Biomolecular Sciences, University of Urbino, 61029, Urbino, Italy; Inter-Institute Center for Research on Marine Biodiversity, Resources and Biotechnologies, 61032, Fano, Italy
| | - Silvia Casabianca
- Department of Biomolecular Sciences, University of Urbino, 61029, Urbino, Italy; Inter-Institute Center for Research on Marine Biodiversity, Resources and Biotechnologies, 61032, Fano, Italy
| | - Samuela Capellacci
- Department of Biomolecular Sciences, University of Urbino, 61029, Urbino, Italy; Inter-Institute Center for Research on Marine Biodiversity, Resources and Biotechnologies, 61032, Fano, Italy
| | - Nadia Marinchel
- Department of Biomolecular Sciences, University of Urbino, 61029, Urbino, Italy
| | - Pierluigi Penna
- Institute of Marine Biological Resources and Biotechnologies - CNR IRBIM, 60125, Ancona, Italy
| | - Fabrizio Moro
- Institute of Marine Biological Resources and Biotechnologies - CNR IRBIM, 60125, Ancona, Italy
| | - Alessandra Campanelli
- Institute of Marine Biological Resources and Biotechnologies - CNR IRBIM, 60125, Ancona, Italy
| | - Luigi Bolognini
- Department Territory and Environment, Marche Region, 60125, Ancona, Italy
| | - Marin Ordulj
- Department of Marine Studies, University of Split, 21000, Split, Croatia
| | - Maja Krzelj
- Department of Marine Studies, University of Split, 21000, Split, Croatia
| | - Vedrana Špada
- Istrian University of Applied Sciences, 52100, Pula, Croatia
| | - Josipa Bilić
- Istrian University of Applied Sciences, 52100, Pula, Croatia
| | - Marija Sikoronja
- Water Management Institute, Croatian Waters, 10000, Zagreb, Croatia
| | - Neven Bujas
- Water Management Institute, Croatian Waters, 10000, Zagreb, Croatia
| | - Elena Manini
- Institute of Marine Biological Resources and Biotechnologies - CNR IRBIM, 60125, Ancona, Italy
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Basili M, Perini L, Zaggia L, Luna GM, Quero GM. Integrating culture-based and molecular methods provides an improved assessment of microbial quality in a coastal lagoon. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2023; 334:122140. [PMID: 37414126 DOI: 10.1016/j.envpol.2023.122140] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/24/2023] [Revised: 06/07/2023] [Accepted: 07/02/2023] [Indexed: 07/08/2023]
Abstract
Faecal pollution in aquatic environments is a worldwide public health concern, yet the reliability and comprehensiveness of the methods used to assess faecal contamination are still debated. We compared three approaches, namely a culture-based method to enumerate Faecal Indicator Bacteria (FIB), a FIB-targeting qPCR assay, and High-Throughput Sequencing (HTS) to detect faeces- and sewage-associated taxa in water and sediment samples of an impacted model lagoon and its adjacent sea across one year. Despite at different levels, all approaches agreed in showing a higher contamination in the lagoon than in the sea, and higher in sediments than water. FIB significantly correlated when considering separately sediment and water, and when using both cultivation and qPCR. Similarly, FIB correlated between cultivation and qPCR, but qPCR provided consistently higher estimates of FIB. Faeces-associated bacteria positively correlated with cultivated FIB in both compartments, whereas sewage-associated bacteria did only in water. Considering their benefits and limitations, we conclude that, in our study site, improved quali-quantitative information on contamination is provided when at least two approaches are combined (e.g., cultivation and qPCR or HTS data). Our results provide insights to move beyond the use of FIB to improve faecal pollution management in aquatic environments and to incorporate HTS analysis into routine monitoring.
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Affiliation(s)
- Marco Basili
- CNR IRBIM, National Research Council - Institute of Marine Biological Resources and Biotechnologies, Largo Fiera della Pesca, 60125, Ancona, Italy
| | - Laura Perini
- Department of Environmental Science, Aarhus University, 4000, Roskilde, Denmark
| | - Luca Zaggia
- CNR IGG, National Research Council - Institute of Geosciences and Earth Resources, Via G. Gradenigo 6, 35131, Padova, Italy
| | - Gian Marco Luna
- CNR IRBIM, National Research Council - Institute of Marine Biological Resources and Biotechnologies, Largo Fiera della Pesca, 60125, Ancona, Italy
| | - Grazia Marina Quero
- CNR IRBIM, National Research Council - Institute of Marine Biological Resources and Biotechnologies, Largo Fiera della Pesca, 60125, Ancona, Italy.
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Lv B, Zhu G, Tian W, Guo C, Lu X, Han Y, An T, Cui Y, Jiang T. The prevalence of potential pathogens in ballast water and sediments of oceangoing vessels and implications for management. ENVIRONMENTAL RESEARCH 2023; 218:114990. [PMID: 36463990 DOI: 10.1016/j.envres.2022.114990] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/02/2022] [Revised: 11/26/2022] [Accepted: 11/30/2022] [Indexed: 06/17/2023]
Abstract
Ballast water and sediments can serve as prominent vectors for the widespread dispersal of pathogens between geographically distant areas. However, information regarding the diversity and distribution of the bacterial pathogens in ballast water and sediments is highly limited. In this study, using high-throughput sequencing and quantitative PCR, we investigated the composition and abundance of potential pathogens, and their associations with indicator microorganisms. We accordingly detected 48 potential bacterial pathogens in the assessed ballast water and sediments, among which there were significant differences in the compositions and abundances of pathogenic bacterial communities characterizing ballast water and sediments. Rhodococcus erythropolis, Bacteroides vulgatus, and Vibrio campbellii were identified as predominant pathogens in ballast water, whereas Pseudomonas stutzeri, Mycobacterium paragordonae, and Bacillus anthracis predominated in ballast sediments. Bacteroidetes, Vibrio alginolyticus, Vibrio parahaemolyticus, and Escherichia coli were generally detected with median values of 8.54 × 103-1.22 × 107 gene copies (GC)/100 mL and 1.16 × 107-3.97 × 109 GC/100 g in ballast water and sediments, respectively. Notably, the concentrations of Shigella sp., Staphylococcus aureus, and V. alginolyticus were significantly higher in ballast sediments than in the water. In addition, our findings tend to confirm that the indicator species specified by the International Maritime Organization (IMO) might underestimate the pathogen risk in the ballast water and sediments, as these bacteria were unable to predict some potential pathogens assessed in this study. In summary, this study provides a comprehensive insight into the spectrum of the potential pathogens that transferred by ship ballast tanks and emphasizes the need for the implementation of IMO convention on ballast sediment management.
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Affiliation(s)
- Baoyi Lv
- International Joint Research Center for Persistent Toxic Substances (IJRC-PTS), College of Ocean Science and Engineering, Shanghai Maritime University, Shanghai, 201306, China.
| | - Guorong Zhu
- International Joint Research Center for Persistent Toxic Substances (IJRC-PTS), College of Ocean Science and Engineering, Shanghai Maritime University, Shanghai, 201306, China
| | - Wen Tian
- Jiangyin Customs, Jiangyin, 214400, China
| | - Chong Guo
- Maritime Safety Bureau of Yangshan Port, Shanghai, 201306, China
| | - Xiaolan Lu
- International Joint Research Center for Persistent Toxic Substances (IJRC-PTS), College of Ocean Science and Engineering, Shanghai Maritime University, Shanghai, 201306, China
| | - Yangchun Han
- Maritime Safety Bureau of Yangshan Port, Shanghai, 201306, China
| | - Tingxuan An
- International Joint Research Center for Persistent Toxic Substances (IJRC-PTS), College of Ocean Science and Engineering, Shanghai Maritime University, Shanghai, 201306, China
| | - Yuxue Cui
- Shanghai Engineering Research Center of Biotransformation of Organic Solid Waste, School of Ecology and Environmental Sciences, East China Normal University, Shanghai, 200241, China
| | - Ting Jiang
- International Joint Research Center for Persistent Toxic Substances (IJRC-PTS), College of Ocean Science and Engineering, Shanghai Maritime University, Shanghai, 201306, China
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Comparative study between immobilized and suspended Chlorella sp in treatment of pollutant sites in Dhiba port Kingdom of Saudi Arabia. Heliyon 2022; 8:e10766. [PMID: 36193529 PMCID: PMC9526162 DOI: 10.1016/j.heliyon.2022.e10766] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/14/2022] [Revised: 06/05/2022] [Accepted: 09/21/2022] [Indexed: 11/22/2022] Open
Abstract
Dhiba port has a strategic location near the Neom project. Various anthropogenic activities contributed to the discharge of metals, metalloids and oil spills in the aquatic system and caused environmental pollution. Microalgae are the best microorganisms in aquatic conditions known to be capable of eliminating contaminants. In this work the Chlorella sp. was isolated from seawater, the metals, metalloids were determine using ICP- OES (Inductively Coupled Plasma-Optical Emission Spectrometer) and hydrocarbons were determine using GC-MS in different five sites in Dhiba port, after and before treated with Chlorella sp, and immobilized Chlorella sp. The growth parameters (optical density and pigment contents) of Chlorella sp and immobilized Chlorella sp. were investigated during 14 days of grown. The results showed that the most contaminated site by metals and metalloids was site no 3, by Sb, As, Be, Se, and Zn with concentrations 0.07546, 0.05709, 0.09326, 0.4618, and 0.00979 mg/L respectively, and site no 1 was the most contamination by organic compounds, so the site no 1 and site no 3 were chosen to test the efficiency of Chlorella sp. and immobilized Chlorella sp. to remove hydrocarbons and both metals and metalloids. Chlorella sp. and immobilized Chlorella sp. had completely removed metals and metalloids that were present in site 3. There were only 6 compounds remained, after treatments with immobilized alga in site 1. Immobilized Chlorella sp. is the most effective than suspended Chlorella sp in reduces the number of organic compounds in contaminated area. It is an economic tool due to simplifying harvesting and then retaining for further processing.
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Kraus R, Baljak V, Vukić Lušić D, Kranjčević L, Cenov A, Glad M, Kauzlarić V, Lušić D, Grbčić L, Alvir M, Pećarević M, Jozić S. Impacts of Atmospheric and Anthropogenic Factors on Microbiological Pollution of the Recreational Coastal Beaches Neighboring Shipping Ports. INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH 2022; 19:ijerph19148552. [PMID: 35886403 PMCID: PMC9324796 DOI: 10.3390/ijerph19148552] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/15/2022] [Revised: 07/10/2022] [Accepted: 07/11/2022] [Indexed: 02/04/2023]
Abstract
A comparative study of the two northeastern ports of the Adriatic Sea indicated that the port of Rijeka is microbiologically more loaded than the port of Pula and posing a greater threat to other ports through a potential transfer of pathogens by ballast water. Fecal indicator bacteria, Escherichia coli and intestinal enterococci, were investigated seasonally in 2014–2015 in the ports and during the bathing season monitoring in the two bays where ports are located in 2009–2020. In addition, the indicators and pathogens related to human health were determined in the ports’ seawater and sediment. The determined factors contributing to microbiological pollution were higher number of tourists and locals, potential wastewater and ballast water discharge and enclosed port configuration, with high solar radiation and low precipitation reducing the negative effects. Our research points to the necessity of including Clostridium perfringens in monitoring beach sand during the bathing seasons and a wider list of pathogens in port monitoring due to a potential transfer by shipping ballast water.
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Affiliation(s)
- Romina Kraus
- Center for Marine Research, Ruđer Bošković Institute, Giordano Paliaga 5, 52210 Rovinj, Croatia;
| | - Vanja Baljak
- Faculty of Medicine, University of Rijeka, Braće Branchetta 20, 51000 Rijeka, Croatia;
| | - Darija Vukić Lušić
- Department of Environmental Health, Teaching Institute of Public Health of Primorje-Gorski Kotar County, Krešimirova 52a, 51000 Rijeka, Croatia; (A.C.); (M.G.)
- Department of Environmental Health, Faculty of Medicine, University of Rijeka, Braće Branchetta 20, 51000 Rijeka, Croatia;
- Center for Advanced Computing and Modelling, University of Rijeka, Radmile Matejčić 2, 51000 Rijeka, Croatia;
- Correspondence: (D.V.L.); (L.K.); Tel.: +385-(0)51-358-755 (D.V.L.); +385-(0)51-651-554 (L.K.)
| | - Lado Kranjčević
- Center for Advanced Computing and Modelling, University of Rijeka, Radmile Matejčić 2, 51000 Rijeka, Croatia;
- Department of Fluid Mechanics and Computational Engineering, Faculty of Engineering, University of Rijeka, Vukovarska 58, 51000 Rijeka, Croatia;
- Correspondence: (D.V.L.); (L.K.); Tel.: +385-(0)51-358-755 (D.V.L.); +385-(0)51-651-554 (L.K.)
| | - Arijana Cenov
- Department of Environmental Health, Teaching Institute of Public Health of Primorje-Gorski Kotar County, Krešimirova 52a, 51000 Rijeka, Croatia; (A.C.); (M.G.)
- Department of Environmental Health, Faculty of Medicine, University of Rijeka, Braće Branchetta 20, 51000 Rijeka, Croatia;
| | - Marin Glad
- Department of Environmental Health, Teaching Institute of Public Health of Primorje-Gorski Kotar County, Krešimirova 52a, 51000 Rijeka, Croatia; (A.C.); (M.G.)
- Department of Environmental Health, Faculty of Medicine, University of Rijeka, Braće Branchetta 20, 51000 Rijeka, Croatia;
| | - Vesna Kauzlarić
- Department of Environmental Health, Institute of Public Health of Istrian County, 52100 Pula, Croatia;
| | - Dražen Lušić
- Department of Environmental Health, Faculty of Medicine, University of Rijeka, Braće Branchetta 20, 51000 Rijeka, Croatia;
- Center for Advanced Computing and Modelling, University of Rijeka, Radmile Matejčić 2, 51000 Rijeka, Croatia;
- Department of Basic Medical Sciences, Faculty of Health Studies, University of Rijeka, Viktora Cara Emina 5, 51000 Rijeka, Croatia
| | - Luka Grbčić
- Center for Advanced Computing and Modelling, University of Rijeka, Radmile Matejčić 2, 51000 Rijeka, Croatia;
- Department of Fluid Mechanics and Computational Engineering, Faculty of Engineering, University of Rijeka, Vukovarska 58, 51000 Rijeka, Croatia;
| | - Marta Alvir
- Department of Fluid Mechanics and Computational Engineering, Faculty of Engineering, University of Rijeka, Vukovarska 58, 51000 Rijeka, Croatia;
| | - Marijana Pećarević
- Department of Applied Ecology, University of Dubrovnik, Ćira Carića 4, 20000 Dubrovnik, Croatia;
| | - Slaven Jozić
- Institute of Oceanography and Fisheries, Šetalište I. Meštrovića 63, 21000 Split, Croatia;
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Franzo A, Baldrighi E, Grassi E, Grego M, Balsamo M, Basili M, Semprucci F. Free-living nematodes of Mediterranean ports: A mandatory contribution for their use in ecological quality assessment. MARINE POLLUTION BULLETIN 2022; 180:113814. [PMID: 35679809 DOI: 10.1016/j.marpolbul.2022.113814] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/14/2022] [Revised: 05/16/2022] [Accepted: 05/29/2022] [Indexed: 06/15/2023]
Abstract
Free-living nematodes were investigated in three Mediterranean commercial ports (Ancona and Trieste, Italy; Koper, Slovenia) in terms of abundance, diversity and functionality. Results indicated that r-strategist genera were dominant in all ports and that a more diverse assemblage characterized Trieste, despite the high contamination levels, suggesting a potential adaptation to long-standing contamination. The main environmental factor that shaped the assemblage in all ports were Total Polycyclic Aromatic Hydrocarbons, while Total Organic Carbon and the grain-size were less relevant. A co-occurrence analysis was applied for identifying which genera cohesively respond to site-specific environmental conditions in order to recalibrate and implement the sets of bioindicator genera in relation to their different opportunistic behaviour. Finally, we provided some suggestions for a proper application of the nematode indices (Maturity Index, Index of Trophic Diversity, Shannon diversity) in order to encourage the use of free-living nematodes for the environmental quality assessment of commercial ports.
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Affiliation(s)
- Annalisa Franzo
- Oceanography Section, Istituto Nazionale di Oceanografia e di Geofisica Sperimentale, OGS I-34151 Trieste, Italy.
| | - Elisa Baldrighi
- Institute for Biological Resources and Marine Biotechnologies (IRBIM), Italian National Research Council (CNR), Largo Fiera della Pesca 1, 60125 Ancona, Italy.
| | - Eleonora Grassi
- Department of Biomolecular Sciences (DiSB), University of Urbino 'Carlo Bo', loc. Crocicchia, 61029 Urbino, Italy.
| | - Mateja Grego
- National Institute of Biology, Marine Biology Station Piran, Fornace 41, SI-6330 Piran, Slovenia.
| | - Maria Balsamo
- Department of Biomolecular Sciences (DiSB), University of Urbino 'Carlo Bo', loc. Crocicchia, 61029 Urbino, Italy; Fano Marine Center, The Inter-Institute Center for Research on Marine Biodiversity, Resources and Biotechnologies, 61032 Fano, Italy; Consorzio Nazionale Interuniversitario per le Scienze del Mare (CoNISMa) Rome, URL-Centro Direzionale-Isola C4, 80143 Napoli, Italy.
| | - Marco Basili
- Institute for Biological Resources and Marine Biotechnologies (IRBIM), Italian National Research Council (CNR), Largo Fiera della Pesca 1, 60125 Ancona, Italy.
| | - Federica Semprucci
- Department of Biomolecular Sciences (DiSB), University of Urbino 'Carlo Bo', loc. Crocicchia, 61029 Urbino, Italy; Fano Marine Center, The Inter-Institute Center for Research on Marine Biodiversity, Resources and Biotechnologies, 61032 Fano, Italy; Consorzio Nazionale Interuniversitario per le Scienze del Mare (CoNISMa) Rome, URL-Centro Direzionale-Isola C4, 80143 Napoli, Italy.
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9
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Basili M, Techtmann SM, Zaggia L, Luna GM, Quero GM. Partitioning and sources of microbial pollution in the Venice Lagoon. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022; 818:151755. [PMID: 34848267 DOI: 10.1016/j.scitotenv.2021.151755] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/02/2021] [Revised: 10/25/2021] [Accepted: 11/13/2021] [Indexed: 06/13/2023]
Abstract
Microbial pollutants are a serious threat to human and environmental health in coastal areas. Based on the hypothesis that pollution from multiple sources may produce a distinct microbial signature and that microbial pollutants seem to distribute between a free-living and a particle-attached fraction, we investigated the occurrence, partitioning and sources of microbial pollutants in water samples collected in the Venice Lagoon (Italy). The area was taken as a case study of an environment characterized by a long history of industrial pollution and by growing human pressure. We found a variety of pollutants from several sources, with sewage-associated and faecal bacteria accounting for up to 5.98% of microbial communities. Sewage-associated pollutants were most abundant close to the city centre. Faecal pollution was highest in the area of the industrial port and was dominated by human inputs, whereas contamination from animal faeces was mainly detected at the interface with the mainland. Microbial pollutants were almost exclusively associated with the particle-attached fraction. The samples also contained other potential pathogens. Our findings stress the need for monitoring and managing microbial pollution in highly urbanized lagoon and semi-enclosed systems and suggest that management plans to reduce microbial inputs to the waterways should include measures to reduce particulate matter inputs to the lagoon. Finally, High-Throughput Sequencing combined with computational approaches proved critical to assess water quality and appears to be a valuable tool to support the monitoring of waterborne diseases.
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Affiliation(s)
- Marco Basili
- CNR IRBIM, National Research Council - Institute of Marine Biological Resources and Biotechnologies, Largo Fiera della Pesca, 60125 Ancona, Italy
| | - Stephen M Techtmann
- Department of Biological Sciences, Michigan Technological University, Houghton, MI, United States
| | - Luca Zaggia
- CNR IGG, National Research Council - Institute of Geosciences and Earth Resources, Via G. Gradenigo 6, 35131 Padova, Italy
| | - Gian Marco Luna
- CNR IRBIM, National Research Council - Institute of Marine Biological Resources and Biotechnologies, Largo Fiera della Pesca, 60125 Ancona, Italy
| | - Grazia Marina Quero
- CNR IRBIM, National Research Council - Institute of Marine Biological Resources and Biotechnologies, Largo Fiera della Pesca, 60125 Ancona, Italy.
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10
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Metagenomic Characterization of Microbial Pollutants and Antibiotic- and Metal-Resistance Genes in Sediments from the Canals of Venice. WATER 2022. [DOI: 10.3390/w14071161] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
The spread of fecal pollutants and antibiotic resistance in the aquatic environment represents a major public health concern and is predicted to increase in light of climate change consequences and the increasing human population pressure on the lagoon and coastal areas. The city of Venice (Italy) is affected by diverse microbial pollution sources, including domestic wastewaters that, due to the lack of modern sewage treatment infrastructure in the historical city center, are released into canals. The outflowing jets of its tidal inlets thus represent a source of contamination for the nearby beaches on the barrier island separating the lagoon from the sea. Metagenomic analyses of DNA extracted from sediment samples from six sites in the canals of the city’s historic center were undertaken to characterize the microbial community composition, the presence of fecal microbes as well as other non-enteric pathogens, and the content of genes related to antibiotic (AB) and heavy metal (HM) resistance, and virulence. The six sites hosted similar prokaryotic communities, although variations in community composition likely related to oxygen availability were observed. All sites displayed relatively high levels of fecal contamination, including the presence of Fecal Indicator Bacteria, sewage- and alternative feces-associated bacteria. Relatively high levels of other potential pathogens were also found. About 1 in 500 genes identified at these sites are related to AB and HM resistance; conversely, genes related to virulence were rare. Our data suggest the existence of widespread sediment microbial pollution in the canals of Venice, coupled with the prevalence of ARGs to antibiotics frequently used in humans as well as of HMRGs to toxic metals that still persists in the lagoon. All of this evidence raises concerns about the consequences on the water quality of the lagoon and adjacent marine areas and the potential risks for humans, deserving further studies.
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11
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Assessment of Spatio-Temporal Variability of Faecal Pollution along Coastal Waters during and after Rainfall Events. WATER 2022. [DOI: 10.3390/w14030502] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
Abstract
More than 80% of wastewaters are discharged into rivers or seas, with a negative impact on water quality along the coast due to the presence of potential pathogens of faecal origin. Escherichia coli and enterococci are important indicators to assess, monitor, and predict microbial water quality in natural ecosystems. During rainfall events, the amount of wastewater delivered to rivers and coastal systems is increased dramatically. This study implements measures capable of monitoring the pathways of wastewater discharge to rivers and the transport of faecal bacteria to the coastal area during and following extreme rainfall events. Spatio-temporal variability of faecal microorganisms and their relationship with environmental variables and sewage outflow in an area located in the western Adriatic coast (Fano, Italy) was monitored. The daily monitoring during the rainy events was carried out for two summer seasons, for a total of five sampling periods. These results highlight that faecal microbial contaminations were related to rainy events with a high flow of wastewater, with recovery times for the microbiological indicators varying between 24 and 72 h and influenced by a dynamic dispersion. The positive correlation between ammonium and faecal bacteria at the Arzilla River and the consequences in seawater can provide a theoretical basis for controlling ammonium levels in rivers as a proxy to monitor the potential risk of bathing waters pathogen pollution.
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12
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Ndione M, Ory P, Agion T, Treilles M, Vacher L, Simon-Bouhet B, Le Beguec M, Pineau P, Montanié H, Agogué H. Temporal variations in fecal indicator bacteria in bathing water and sediment in a coastal ecosystem (Aytré Bay, Charente-Maritime, France). MARINE POLLUTION BULLETIN 2022; 175:113360. [PMID: 35134737 DOI: 10.1016/j.marpolbul.2022.113360] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/04/2021] [Revised: 01/11/2022] [Accepted: 01/15/2022] [Indexed: 06/14/2023]
Abstract
This study presents the fecal contamination dynamic at the two bathing sites of Aytré Bay (Charente Maritime, France). We quantified fecal indicator bacteria (FIB) abundances (Escherichia coli and enterococci) from water and sediment samples over one-year survey. Then we measured biological (bacterial abundance, chlorophyll-a), physico-chemical (dissolved nutrients and oxygen, salinity, pH …) and climatic (temperatures, rainfall and tidal coefficient) parameters. Results showed that FIB abundances were occasionally higher than the European regulatory threshold during winter, summer and fall. The "poor quality" of the bathing water was due to high enterococci abundance. We found negative significant correlations between FIB and water temperature and salinity, and positive significant correlations between FIB and rainfall, PO4, NO3, NO2, and SiO2 mainly in water. Relationships between parameters showed that during summer and spring the main environmental drivers were temperature and salinity, while in fall and winter they were rainfall and dissolved nutrients.
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Affiliation(s)
- Méry Ndione
- Littoral Environnement et Sociétés (LIENSs) UMR 7266 CNRS-La Rochelle Université, La Rochelle, France
| | - Pascaline Ory
- Littoral Environnement et Sociétés (LIENSs) UMR 7266 CNRS-La Rochelle Université, La Rochelle, France
| | - Tony Agion
- QUALYSE, Laboratoire d'analyses, La Rochelle, France
| | | | - Luc Vacher
- Littoral Environnement et Sociétés (LIENSs) UMR 7266 CNRS-La Rochelle Université, La Rochelle, France
| | - Benoit Simon-Bouhet
- Centre d'Etudes Biologiques de Chizé (CEBC), UMR 7372 CNRS-La Rochelle Université, Chizé, France
| | - Maëlig Le Beguec
- Littoral Environnement et Sociétés (LIENSs) UMR 7266 CNRS-La Rochelle Université, La Rochelle, France
| | - Philippe Pineau
- Littoral Environnement et Sociétés (LIENSs) UMR 7266 CNRS-La Rochelle Université, La Rochelle, France
| | - Hélène Montanié
- Littoral Environnement et Sociétés (LIENSs) UMR 7266 CNRS-La Rochelle Université, La Rochelle, France
| | - Hélène Agogué
- Littoral Environnement et Sociétés (LIENSs) UMR 7266 CNRS-La Rochelle Université, La Rochelle, France.
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13
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Orel N, Fadeev E, Klun K, Ličer M, Tinta T, Turk V. Bacterial Indicators Are Ubiquitous Members of Pelagic Microbiome in Anthropogenically Impacted Coastal Ecosystem. Front Microbiol 2022; 12:765091. [PMID: 35111137 PMCID: PMC8801744 DOI: 10.3389/fmicb.2021.765091] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/26/2021] [Accepted: 11/25/2021] [Indexed: 01/18/2023] Open
Abstract
Coastal zones are exposed to various anthropogenic impacts, such as different types of wastewater pollution, e.g., treated wastewater discharges, leakage from sewage systems, and agricultural and urban runoff. These various inputs can introduce allochthonous organic matter and microbes, including pathogens, into the coastal marine environment. The presence of fecal bacterial indicators in the coastal environment is usually monitored using traditional culture-based methods that, however, fail to detect their uncultured representatives. We have conducted a year-around in situ survey of the pelagic microbiome of the dynamic coastal ecosystem, subjected to different anthropogenic pressures to depict the seasonal and spatial dynamics of traditional and alternative fecal bacterial indicators. To provide an insight into the environmental conditions under which bacterial indicators thrive, a suite of environmental factors and bacterial community dynamics were analyzed concurrently. Analyses of 16S rRNA amplicon sequences revealed that the coastal microbiome was primarily structured by seasonal changes regardless of the distance from the wastewater pollution sources. On the other hand, fecal bacterial indicators were not affected by seasons and accounted for up to 34% of the sequence proportion for a given sample. Even more so, traditional fecal indicator bacteria (Enterobacteriaceae) and alternative wastewater-associated bacteria (Lachnospiraceae, Ruminococcaceae, Arcobacteraceae, Pseudomonadaceae and Vibrionaceae) were part of the core coastal microbiome, i.e., present at all sampling stations. Microbial source tracking and Lagrangian particle tracking, which we employed to assess the potential pollution source, revealed the importance of riverine water as a vector for transmission of allochthonous microbes into the marine system. Further phylogenetic analysis showed that the Arcobacteraceae in our data set was affiliated with the pathogenic Arcobacter cryaerophilus, suggesting that a potential exposure risk for bacterial pathogens in anthropogenically impacted coastal zones remains. We emphasize that molecular analyses combined with statistical and oceanographic models may provide new insights for environmental health assessment and reveal the potential source and presence of microbial indicators, which are otherwise overlooked by a cultivation approach.
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Affiliation(s)
- Neža Orel
- Marine Biology Station Piran, National Institute of Biology, Piran, Slovenia
- *Correspondence: Neža Orel,
| | - Eduard Fadeev
- Department of Functional and Evolutionary Ecology, University of Vienna, Vienna, Austria
| | - Katja Klun
- Marine Biology Station Piran, National Institute of Biology, Piran, Slovenia
| | - Matjaž Ličer
- Marine Biology Station Piran, National Institute of Biology, Piran, Slovenia
- Office for Meteorology, Hydrology and Oceanography, Slovenian Environment Agency, Ljubljana, Slovenia
| | - Tinkara Tinta
- Marine Biology Station Piran, National Institute of Biology, Piran, Slovenia
- Tinkara Tinta,
| | - Valentina Turk
- Marine Biology Station Piran, National Institute of Biology, Piran, Slovenia
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14
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Abstract
In this study, we analysed the sea pollution caused by sewage from vessels. The Dubrovnik aquatorium was chosen as a typical sea area that accommodates a variety of vessels in different locations. We sampled the sea at eight different coastal locations over 14 months and then analysed the samples to determine the presence of the indicators of fecal pollution. Simultaneous with the sampling of the sea, we recorded the number and type of vessels accommodated at the port. These data were applied in chi-square tests, which were used to determine the existence of the relationship of certain types of vessels with fecal coliform bacteria in the sea for each location. The correlation was determined between smaller vessels such as boats, yachts, megayachts, and smaller cruise ships in national navigation with bacteria at sea at the sampling locations. The results can provide an improved understanding of sea pollution due to sewage from vessels.
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15
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Penna P, Baldrighi E, Betti M, Bolognini L, Campanelli A, Capellacci S, Casabianca S, Ferrarin C, Giuliani G, Grilli F, Intoccia M, Manini E, Moro F, Penna A, Ricci F, Marini M. Water quality integrated system: A strategic approach to improve bathing water management. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2021; 295:113099. [PMID: 34175506 DOI: 10.1016/j.jenvman.2021.113099] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/10/2020] [Revised: 03/15/2021] [Accepted: 06/15/2021] [Indexed: 06/13/2023]
Abstract
In the Adriatic Sea, massive rainfall events are causing flooding of rivers and streams, with severe consequences on the environment. The consequent bacterial contamination of bathing water poses public health risks besides damaging tourism and the economy. This study was conducted in the framework of WATERCARE, an EU Interreg Italy-Croatia Project, which aims at reducing the impact of microbial contamination on Adriatic bathing water due to heavy rainfall events drained in the local sewage network and; enhancing the quality of local waters; and providing support for the decision-making processes regarding the management of bathing water in line with EU regulations. The study involved the development of an innovative water quality integrated system that helps meet these objectives. It consists of four components: a real time hydro-meteorological monitoring system; an autosampler to collect freshwater samples during and after significant rainfall events; a forecast system to simulate the dispersion of pollutants in seawater; and a real-time alert system that can predict the potential ecological risk from the microbial contamination of seawater. The system was developed and tested at a pilot site (Fano, Italy). These preliminary results will be used to develop guidelines for urban wastewater and coastal system quality assessments to contribute to develop policy actions and final governance decisions.
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Affiliation(s)
- Pierluigi Penna
- National Research Council - Institute of Marine Biological Resources and Biotechnologies - CNR IRBIM, Ancona, Italy.
| | - Elisa Baldrighi
- National Research Council - Institute of Marine Biological Resources and Biotechnologies - CNR IRBIM, Ancona, Italy
| | - Mattia Betti
- National Research Council - Institute of Marine Biological Resources and Biotechnologies - CNR IRBIM, Ancona, Italy; Fano Marine Center, The Inter-Institute Center for Research on Marine Biodiversity, Resources and Biotechnologies, Fano, Italy
| | | | - Alessandra Campanelli
- National Research Council - Institute of Marine Biological Resources and Biotechnologies - CNR IRBIM, Ancona, Italy
| | - Samuela Capellacci
- Department of Biomolecular Sciences, DISB, University of Urbino, Italy; Fano Marine Center, The Inter-Institute Center for Research on Marine Biodiversity, Resources and Biotechnologies, Fano, Italy
| | - Silvia Casabianca
- Department of Biomolecular Sciences, DISB, University of Urbino, Italy; Fano Marine Center, The Inter-Institute Center for Research on Marine Biodiversity, Resources and Biotechnologies, Fano, Italy
| | - Christian Ferrarin
- Institute of Marine Sciences - ISMAR, National Research Council - CNR, Venice, Italy
| | - Giordano Giuliani
- National Research Council - Institute of Marine Biological Resources and Biotechnologies - CNR IRBIM, Ancona, Italy
| | - Federica Grilli
- National Research Council - Institute of Marine Biological Resources and Biotechnologies - CNR IRBIM, Ancona, Italy
| | - Michele Intoccia
- Department of Biology, University of Naples Federico II, Naples, Italy
| | - Elena Manini
- National Research Council - Institute of Marine Biological Resources and Biotechnologies - CNR IRBIM, Ancona, Italy
| | - Fabrizio Moro
- National Research Council - Institute of Marine Biological Resources and Biotechnologies - CNR IRBIM, Ancona, Italy
| | - Antonella Penna
- Department of Biomolecular Sciences, DISB, University of Urbino, Italy; Fano Marine Center, The Inter-Institute Center for Research on Marine Biodiversity, Resources and Biotechnologies, Fano, Italy
| | - Fabio Ricci
- Department of Biomolecular Sciences, DISB, University of Urbino, Italy; Fano Marine Center, The Inter-Institute Center for Research on Marine Biodiversity, Resources and Biotechnologies, Fano, Italy
| | - Mauro Marini
- National Research Council - Institute of Marine Biological Resources and Biotechnologies - CNR IRBIM, Ancona, Italy; Fano Marine Center, The Inter-Institute Center for Research on Marine Biodiversity, Resources and Biotechnologies, Fano, Italy
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16
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Basili M, Campanelli A, Frapiccini E, Luna GM, Quero GM. Occurrence and distribution of microbial pollutants in coastal areas of the Adriatic Sea influenced by river discharge. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2021; 285:117672. [PMID: 34380232 DOI: 10.1016/j.envpol.2021.117672] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/21/2021] [Revised: 06/21/2021] [Accepted: 06/27/2021] [Indexed: 06/13/2023]
Abstract
The transport of a variety of pollutants from agricultural, industrial and urbanised areas makes rivers major contributors to the contamination of coastal marine environments. Too little is known of their role in carrying pathogens to the coast. We used DNA-based metabarcoding data to describe the microbial community composition in seawater and sediment collected in front of the estuary of the Tronto, the Chienti and the Esino, three Italian rivers with different pollution levels that empty into the north-central Adriatic Sea, and to detect and measure within these communities the relative abundance of microbial pollutants, including traditional faecal indicators and alternative faecal and sewage-associated pollutants. We then applied the FORENSIC algorithm to distinguish human from non-human sources of microbial pollution and FAPROTAX to map prokaryotic clades to established metabolic or other ecologically relevant functions. Finally, we searched the dataset for other common pathogenic taxa. Seawater and sediment contained numerous potentially pathogenic bacteria, mainly faecal and sewage-associated. The samples collected in front of the Tronto estuary showed the highest level of contamination, likely sewage-associated. The pathogenic signature showed a weak but positive correlation with some nutrients and strong correlations with some polycyclic aromatic hydrocarbons. This study confirms that rivers transport pathogenic bacteria to the coastal sea and highlights the value of expanding the use of HTS data, source tracking and functional identification tools to detect microbial pollutants and identify their sources with a view to gaining a better understanding of the pathways of sewage-associated discharges to the sea.
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Affiliation(s)
- Marco Basili
- Institute of Marine Biological Resources and Biotechnologies, National Research Council (CNR-IRBIM), Ancona, Italy
| | - Alessandra Campanelli
- Institute of Marine Biological Resources and Biotechnologies, National Research Council (CNR-IRBIM), Ancona, Italy
| | - Emanuela Frapiccini
- Institute of Marine Biological Resources and Biotechnologies, National Research Council (CNR-IRBIM), Ancona, Italy
| | - Gian Marco Luna
- Institute of Marine Biological Resources and Biotechnologies, National Research Council (CNR-IRBIM), Ancona, Italy
| | - Grazia Marina Quero
- Institute of Marine Biological Resources and Biotechnologies, National Research Council (CNR-IRBIM), Ancona, Italy.
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17
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Abstract
The aim of this study is to develop a relocatable modelling system able to describe the microbial contamination that affects the quality of coastal bathing waters. Pollution events are mainly triggered by urban sewer outflows during massive rainy events, with relevant negative consequences on the marine environment and tourism and related activities of coastal towns. A finite element hydrodynamic model was applied to five study areas in the Adriatic Sea, which differ for urban, oceanographic and morphological conditions. With the help of transport-diffusion and microbial decay modules, the distribution of Escherichia coli was investigated during significant events. The numerical investigation was supported by detailed in situ observational datasets. The model results were evaluated against water level, sea temperature, salinity and E. coli concentrations acquired in situ, demonstrating the capacity of the modelling suite in simulating the circulation in the coastal areas of the Adriatic Sea, as well as several main transport and diffusion dynamics, such as riverine and polluted waters dispersion. Moreover, the results of the simulations were used to perform a comparative analysis among the different study sites, demonstrating that dilution and mixing, mostly induced by the tidal action, had a stronger effect on bacteria reduction with respect to microbial decay. Stratification and estuarine dynamics also play an important role in governing microbial concentration. The modelling suite can be used as a beach management tool for improving protection of public health, as required by the EU Bathing Water Directive.
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18
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Guerra-García JM, Navarro-Barranco C, Martínez-Laiz G, Moreira J, Giráldez I, Morales E, Fernández-Romero A, Florido M, Ros M. Assessing environmental pollution levels in marinas. THE SCIENCE OF THE TOTAL ENVIRONMENT 2021; 762:144169. [PMID: 33360466 DOI: 10.1016/j.scitotenv.2020.144169] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/08/2020] [Revised: 11/10/2020] [Accepted: 11/28/2020] [Indexed: 06/12/2023]
Abstract
Despite the growing interest in recreational boating and the increasing number of marinas along the world's coastlines, environmental knowledge of these ecosystems is still very scarce. Detailed data of pollutants in marinas are necessary to provide a global approach of environmental risks in the context of international management strategies. In the present study, a set of 64 variables (30 in seawater and 34 in sediments) were measured to compare marinas from the Southern Iberian Peninsula (SIP). Uni and multivariate analyses showed significant differences among marinas, evidencing the importance of management on a local scale. The most relevant variables determining these differences were turbidity and the biocide Irgarol 1051 in seawater, and granulometry, hydrocarbons and faecal coliforms in sediment. The use of normalization techniques with Al or Fe, and the suitability of different methodologies to measure Total Organic Matter in marinas were also discussed. Additionally, we perform a comprehensive literature review of worldwide marina stressors and develop a simple and straightforward method for assessing environmental quality. The method was tested using SIP marinas and was based on the comparison of 15 selected sediment stressors with background values, concentrations of worldwide sediment quality guidelines (SQGs), and reference conditions/security thresholds established by the programme of coastal waters in port areas (ROM 5.1). A global score was assigned using a new proposed index, Marinas Environmental Pollution Index (MEPI), ranging from 0 to 150 points according to the environmental quality (<90: bad, 90-120: moderate, >120: good). MEPI of marinas from SIP ranged from 60 to 110 points indicating bad or moderate levels of pollution. Environmental quality is one of the decisive factors for awarding eco-labels or eco-certifications, such as Blue Flags in marinas. Therefore, pollution baseline information and environmental tools are mandatory for correct assignation of these awards and necessary for assessing the efficiency of management actions.
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Affiliation(s)
- José M Guerra-García
- Laboratorio de Biología Marina, Departamento de Zoología, Facultad de Biología, Universidad de Sevilla, Avenida Reina Mercedes 6, 41012 Seville, Spain.
| | - Carlos Navarro-Barranco
- Laboratorio de Biología Marina, Departamento de Zoología, Facultad de Biología, Universidad de Sevilla, Avenida Reina Mercedes 6, 41012 Seville, Spain
| | - Gemma Martínez-Laiz
- Laboratorio de Biología Marina, Departamento de Zoología, Facultad de Biología, Universidad de Sevilla, Avenida Reina Mercedes 6, 41012 Seville, Spain
| | - Juan Moreira
- Departamento de Biología (Unidad de Zoología) & Centro de Investigación en Biodiversidad y Cambio Goblal (CIBC-UAM), Universidad Autónoma de Madrid, Madrid, Spain
| | - Inmaculada Giráldez
- Dpto. Química "Prof. J.C. Vilchez Martín", Facultad de Ciencias Experimentales Research Center in Technology of Products and Chemical Processes, Pro(2)TecS Universidad de Huelva, Avda. Fuerzas Armadas, s/n, 21071 Huelva, Spain
| | - Emilio Morales
- Dpto. Química "Prof. J.C. Vilchez Martín", Facultad de Ciencias Experimentales Research Center in Technology of Products and Chemical Processes, Pro(2)TecS Universidad de Huelva, Avda. Fuerzas Armadas, s/n, 21071 Huelva, Spain
| | - Alejandro Fernández-Romero
- Laboratorio de Biología Marina, Departamento de Zoología, Facultad de Biología, Universidad de Sevilla, Avenida Reina Mercedes 6, 41012 Seville, Spain
| | - Marta Florido
- Laboratorio de Biología Marina, Departamento de Zoología, Facultad de Biología, Universidad de Sevilla, Avenida Reina Mercedes 6, 41012 Seville, Spain
| | - Macarena Ros
- Laboratorio de Biología Marina, Departamento de Zoología, Facultad de Biología, Universidad de Sevilla, Avenida Reina Mercedes 6, 41012 Seville, Spain
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19
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Research on the Transformation Path of the Green Intelligent Port: Outlining the Perspective of the Evolutionary Game “Government–Port–Third-Party Organization”. SUSTAINABILITY 2020. [DOI: 10.3390/su12198072] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
While promoting the global economy and trade, ports impose serious pollution on the global ocean and atmosphere. Therefore, the development of ports is restrained by the policies and measures of governments and international organizations used to cope with climate change and environmental protection. With the development of information technology, the operation and expansion of ports is facing forms of green and intelligent reform. This research aims to link the development of green intelligent ports, government policies, and third-party organizations to find the most suitable evolutionary path for the development of green intelligent ports. This paper assumes that governments will push ports to transform into green intelligent ports from the perspective of benefiting long-term interests, that the goal of ports is to maximize their profits, and that third-party organizations will actively promote the development of green intelligent ports. Based on these assumptions, this paper has established an evolutionary game theory model of “government–port–third-party organization” regarding the development of green intelligent ports. The Jacobian matrix of the game theory system was constructed by using the replicator dynamic equation, and local stability analysis was performed to obtain the equilibrium stability point of the entire system. This research reveals the limitations of the development of green intelligent ports without government involvement and explores the ability of third-party organizations to promote the implementation of policies, confirming the role of government regulation and control in promoting the development of green intelligent ports. This paper may be helpful for the development of green intelligent ports in the future. The results show that: (1) The main factors affecting the choice of port strategy are the benefits of building a green intelligent port, the intensity of government regulation, and the quantitative influence of third-party evaluation results on the port strategy selection. (2) Government decision-making plays an important role in port transformation. If the relevant government chooses the wrong strategy, then the transformation of the port will be delayed. (3) Government regulation and control need to change with the change of the evolution stage. (4) Compared with the macro-control policies of the government, the influence of the third-party organization on the port is significantly smaller.
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20
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Erdem Ö, Cihangir N, Saylan Y, Denizli A. Comparison of molecularly imprinted plasmonic nanosensor performances for bacteriophage detection. NEW J CHEM 2020. [DOI: 10.1039/d0nj04053c] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Preparation steps of nanoparticle- and nanofilm-based plasmonic nanosensors.
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Affiliation(s)
- Özgecan Erdem
- Hacettepe University
- Department of Biology
- Ankara
- Turkey
| | | | | | - Adil Denizli
- Hacettepe University
- Department of Chemistry
- Ankara
- Turkey
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O'Mullan GD, Juhl AR, Reichert R, Schneider E, Martinez N. Patterns of sediment-associated fecal indicator bacteria in an urban estuary: Benthic-pelagic coupling and implications for shoreline water quality. THE SCIENCE OF THE TOTAL ENVIRONMENT 2019; 656:1168-1177. [PMID: 30625648 DOI: 10.1016/j.scitotenv.2018.11.405] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/16/2018] [Revised: 11/26/2018] [Accepted: 11/26/2018] [Indexed: 06/09/2023]
Abstract
Estuarine and coastal waterways are commonly monitored for fecal and sewage contamination to protect recreator health and ecosystem functions. Such monitoring programs commonly rely on cultivation-based counts of fecal indicator bacteria (FIB) in water column samples. Recent studies demonstrate that sediments and beach sands can be heavily colonized by FIB, and that settling and resuspension of colonized particles may significantly influence the distribution of FIB in the water column. However, measurements of sediment FIB are rarely incorporated into monitoring programs, and geographic surveys of sediment FIB are uncommon. In this study, the distribution of FIB and the extent of benthic-pelagic FIB coupling were examined in the urbanized, lower Hudson River Estuary. Using cultivation-based enumeration, two commonly-measured FIB, enterococci and Escherichia coli, were widely distributed in both sediment and water, and were positively correlated with each other. The taxonomic identity of FIB isolates from water and sediment was confirmed by DNA sequencing. The geometric mean of FIB concentration in sediment was correlated with both the geometric mean of FIB in water samples from the same locations and with sediment organic carbon. These two positive associations likely reflect water as the FIB source for underlying sediments, and longer FIB persistence in the sediments compared to the water, respectively. The relative representation of other fecal associated bacterial genera in sediment, determined by 16S rRNA gene sequencing, increased with the sequence representation of the two FIB, supporting the value of these FIB for assessing sediment contamination. Experimental resuspension of sediment increased shoreline water column FIB concentrations, which may explain why shoreline water samples had higher average FIB concentrations than samples collected nearby but further from shore. In combination, these results demonstrate extensive benthic-pelagic coupling of FIB in an urbanized estuary and highlight the importance of sediment FIB distribution and ecology when interpreting water quality monitoring data.
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Affiliation(s)
- Gregory D O'Mullan
- School of Earth and Environmental Sciences, Queen College, City University of New York, 65-30 Kissena Blvd, Flushing, NY 11367, USA; Lamont-Doherty Earth Observatory of Columbia University, 61 Route 9W, Palisades, NY 10964, USA.
| | - Andrew R Juhl
- Lamont-Doherty Earth Observatory of Columbia University, 61 Route 9W, Palisades, NY 10964, USA
| | - Roman Reichert
- School of Earth and Environmental Sciences, Queen College, City University of New York, 65-30 Kissena Blvd, Flushing, NY 11367, USA
| | - Erin Schneider
- School of Earth and Environmental Sciences, Queen College, City University of New York, 65-30 Kissena Blvd, Flushing, NY 11367, USA
| | - Natalia Martinez
- Lamont-Doherty Earth Observatory of Columbia University, 61 Route 9W, Palisades, NY 10964, USA
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