1
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Porter AM, Hart JJ, Rediske RR, Szlag DC. SARS-CoV-2 wastewater surveillance at two university campuses: lessons learned and insights on intervention strategies for public health guidance. JOURNAL OF WATER AND HEALTH 2024; 22:811-824. [PMID: 38822461 DOI: 10.2166/wh.2024.293] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/28/2023] [Accepted: 04/22/2024] [Indexed: 06/03/2024]
Abstract
Wastewater surveillance has been a tool for public health officials throughout the COVID-19 pandemic. Universities established pandemic response committees to facilitate safe learning for students, faculty, and staff. These committees met to analyze both wastewater and clinical data to propose mitigation strategies to limit the spread of COVID-19. This paper reviews the initial efforts of utilizing campus data inclusive of wastewater surveillance for SARS-CoV-2 RNA concentrations, clinical case data from university response teams, and mitigation strategies from Grand Valley State University in West Michigan (population 21,648 students) and Oakland University in East Michigan (population 18,552 students) from November 2020 to April 2022. Wastewater positivity rates for both universities ranged from 32.8 to 46.8%. Peak viral signals for both universities directly corresponded to variant points of entry within the campus populations from 2021 to 2022. It was found that the organization of clinical case data and variability of wastewater testing data were large barriers for both universities to effectively understand disease dynamics within the university population. We review the initial efforts of onboarding wastewater surveillance and provide direction for structuring ongoing surveillance workflows and future epidemic response strategies based on those that led to reduced viral signals in campus wastewater.
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Affiliation(s)
- Alexis M Porter
- Robert B. Annis Water Resources Institute, 740 West Shoreline Dr, Muskegon, MI 49441, USA E-mail:
| | - John J Hart
- Robert B. Annis Water Resources Institute, 740 West Shoreline Dr, Muskegon, MI 49441, USA; Department of Chemistry, Oakland University, 146 Library Dr, Rochester, MI 48309, USA
| | - Richard R Rediske
- Robert B. Annis Water Resources Institute, 740 West Shoreline Dr, Muskegon, MI 49441, USA
| | - David C Szlag
- Department of Chemistry, Oakland University, 146 Library Dr, Rochester, MI 48309, USA
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2
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Stocks D, Nixon E, Trickey A, Homer M, Brooks-Pollock E. Limited impact of contact tracing in a University setting for COVID-19 due to asymptomatic transmission and social distancing. Epidemics 2023; 45:100716. [PMID: 37690279 DOI: 10.1016/j.epidem.2023.100716] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/29/2021] [Revised: 06/21/2023] [Accepted: 08/21/2023] [Indexed: 09/12/2023] Open
Abstract
Contact tracing is an important tool for controlling the spread of infectious diseases, including COVID-19. Here, we investigate the spread of COVID-19 and the effectiveness of contact tracing in a university population, using a data-driven ego-centric network model constructed with social contact data collected during 2020 and similar data collected in 2010. We find that during 2020, university staff and students consistently reported fewer social contacts than in 2010, however those contacts occurred more frequently and were of longer duration. We find that contact tracing in the presence of social distancing is less impactful than without social distancing. By combining multiple data sources, we show that University-aged populations are likely to develop asymptomatic COVID-19 infections. We find that asymptomatic index cases cannot be reliably discovered through contact tracing and consequently transmission in their social network is not significantly reduced through contact tracing. In summary, social distancing restrictions had a large impact on limiting COVID-19 outbreaks in universities; to reduce transmission further contact tracing should be used in conjunction with alternative interventions.
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Affiliation(s)
- Daniel Stocks
- Department of Engineering Mathematics, University of Bristol, Bristol BS8 1TW, United Kingdom.
| | - Emily Nixon
- School of Biological Sciences, University of Bristol, Bristol BS8 1TQ, United Kingdom; Bristol Veterinary School, University of Bristol, Bristol BS40 5DU, United Kingdom
| | - Adam Trickey
- Population Health Sciences, University of Bristol, Bristol BS8 1TW, United Kingdom
| | - Martin Homer
- Department of Engineering Mathematics, University of Bristol, Bristol BS8 1TW, United Kingdom
| | - Ellen Brooks-Pollock
- Bristol Veterinary School, University of Bristol, Bristol BS40 5DU, United Kingdom
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3
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Rahaman H, Barik D. Investigation of airborne spread of COVID-19 using a hybrid agent-based model: a case study of the UK. ROYAL SOCIETY OPEN SCIENCE 2023; 10:230377. [PMID: 37501658 PMCID: PMC10369033 DOI: 10.1098/rsos.230377] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/24/2023] [Accepted: 07/04/2023] [Indexed: 07/29/2023]
Abstract
Agent-based models have been proven to be quite useful in understanding and predicting the SARS-CoV-2 virus-originated COVID-19 infection. Person-to-person contact was considered as the main mechanism of viral transmission in these models. However, recent understanding has confirmed that airborne transmission is the main route to infection spread of COVID-19. We have developed a computationally efficient agent-based hybrid model to study the aerial propagation of the virus and subsequent spread of infection. We considered virus, a continuous variable, spreads diffusively in air and members of populations as discrete agents possessing one of the eight different states at a particular time. The transition from one state to another is probabilistic and age linked. Recognizing that population movement is a key aspect of infection spread, the model allows unbiased movement of agents. We benchmarked the model to recapture the temporal stochastic infection count data of the UK. The model investigates various key factors such as movement, infection susceptibility, new variants, recovery rate and duration, incubation period and vaccination on the infection propagation over time. Furthermore, the model was applied to capture the infection spread in Italy and France.
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Affiliation(s)
- Hafijur Rahaman
- School of Chemistry, University of Hyderabad, Central University PO, Hyderabad 500046, Telangana, India
| | - Debashis Barik
- School of Chemistry, University of Hyderabad, Central University PO, Hyderabad 500046, Telangana, India
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4
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Soda KJ, Chen X, Feinn R, Hill DR. Monitoring and responding to emerging infectious diseases in a university setting: A case study using COVID-19. PLoS One 2023; 18:e0280979. [PMID: 37196023 PMCID: PMC10191342 DOI: 10.1371/journal.pone.0280979] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/19/2023] [Accepted: 04/28/2023] [Indexed: 05/19/2023] Open
Abstract
Emerging infection diseases (EIDs) are an increasing threat to global public health, especially when the disease is newly emerging. Institutions of higher education (IHEs) are particularly vulnerable to EIDs because student populations frequently share high-density residences and strongly mix with local and distant populations. In fall 2020, IHEs responded to a novel EID, COVID-19. Here, we describe Quinnipiac University's response to SARS-CoV-2 and evaluate its effectiveness through empirical data and model results. Using an agent-based model to approximate disease dynamics in the student body, the University established a policy of dedensification, universal masking, surveillance testing via a targeted sampling design, and app-based symptom monitoring. After an extended period of low incidence, the infection rate grew through October, likely due to growing incidence rates in the surrounding community. A super-spreader event at the end of October caused a spike in cases in November. Student violations of the University's policies contributed to this event, but lax adherence to state health laws in the community may have also contributed. The model results further suggest that the infection rate was sensitive to the rate of imported infections and was disproportionately impacted by non-residential students, a result supported by the observed data. Collectively, this suggests that campus-community interactions play a major role in campus disease dynamics. Further model results suggest that app-based symptom monitoring may have been an important regulator of the University's incidence, likely because it quarantined infectious students without necessitating test results. Targeted sampling had no substantial advantages over simple random sampling when the model incorporated contact tracing and app-based symptom monitoring but reduced the upper boundary on 90% prediction intervals for cumulative infections when either was removed. Thus, targeted sampling designs for surveillance testing may mitigate worst-case outcomes when other interventions are less effective. The results' implications for future EIDs are discussed.
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Affiliation(s)
- K. James Soda
- Department of Mathematics and Statistics, Quinnipiac University, Hamden, Connecticut, United States of America
| | - Xi Chen
- Department of Sociology and Anthropology, Quinnipiac University, Hamden, Connecticut, United States of America
| | - Richard Feinn
- Department of Medical Sciences, Frank H. Netter MD School of Medicine, Quinnipiac University, Hamden, Connecticut, United States of America
| | - David R. Hill
- Department of Medical Sciences, Frank H. Netter MD School of Medicine, Quinnipiac University, Hamden, Connecticut, United States of America
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5
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Das Swain V, Xie J, Madan M, Sargolzaei S, Cai J, De Choudhury M, Abowd GD, Steimle LN, Prakash BA. Empirical networks for localized COVID-19 interventions using WiFi infrastructure at university campuses. Front Digit Health 2023; 5:1060828. [PMID: 37260525 PMCID: PMC10227502 DOI: 10.3389/fdgth.2023.1060828] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/03/2022] [Accepted: 04/12/2023] [Indexed: 06/02/2023] Open
Abstract
Infectious diseases, like COVID-19, pose serious challenges to university campuses, which typically adopt closure as a non-pharmaceutical intervention to control spread and ensure a gradual return to normalcy. Intervention policies, such as remote instruction (RI) where large classes are offered online, reduce potential contact but also have broad side-effects on campus by hampering the local economy, students' learning outcomes, and community wellbeing. In this paper, we demonstrate that university policymakers can mitigate these tradeoffs by leveraging anonymized data from their WiFi infrastructure to learn community mobility-a methodology we refer to as WiFi mobility models (WiMob). This approach enables policymakers to explore more granular policies like localized closures (LC). WiMob can construct contact networks that capture behavior in various spaces, highlighting new potential transmission pathways and temporal variation in contact behavior. Additionally, WiMob enables us to design LC policies that close super-spreader locations on campus. By simulating disease spread with contact networks from WiMob, we find that LC maintains the same reduction in cumulative infections as RI while showing greater reduction in peak infections and internal transmission. Moreover, LC reduces campus burden by closing fewer locations, forcing fewer students into completely online schedules, and requiring no additional isolation. WiMob can empower universities to conceive and assess a variety of closure policies to prevent future outbreaks.
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Affiliation(s)
- Vedant Das Swain
- College of Computing, Georgia Institute of Technology, Atlanta, GA, United States
| | - Jiajia Xie
- College of Computing, Georgia Institute of Technology, Atlanta, GA, United States
- H. Milton Stewart School of Industrial and Systems Engineering, Georgia Institute of Technology, Atlanta, GA, United States
| | - Maanit Madan
- College of Computing, Georgia Institute of Technology, Atlanta, GA, United States
| | - Sonia Sargolzaei
- College of Computing, Georgia Institute of Technology, Atlanta, GA, United States
| | - James Cai
- Department of Computer Science, Brown University, Providence, RI, United States
| | - Munmun De Choudhury
- College of Computing, Georgia Institute of Technology, Atlanta, GA, United States
| | - Gregory D. Abowd
- College of Computing, Georgia Institute of Technology, Atlanta, GA, United States
- College of Engineering, Northeastern University, Boston, MA, United States
| | - Lauren N. Steimle
- H. Milton Stewart School of Industrial and Systems Engineering, Georgia Institute of Technology, Atlanta, GA, United States
| | - B. Aditya Prakash
- College of Computing, Georgia Institute of Technology, Atlanta, GA, United States
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6
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Kumaresan V, Balachandar N, Poole SF, Myers LJ, Varghese P, Washington V, Jia Y, Lee VS. Fitting and validation of an agent-based model for COVID-19 case forecasting in workplaces and universities. PLoS One 2023; 18:e0283517. [PMID: 36952500 PMCID: PMC10035834 DOI: 10.1371/journal.pone.0283517] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/07/2022] [Accepted: 03/10/2023] [Indexed: 03/25/2023] Open
Abstract
COVID-19 forecasting models have been critical in guiding decision-making on surveillance testing, social distancing, and vaccination requirements. Beyond influencing public health policies, an accurate COVID-19 forecasting model can impact community spread by enabling employers and university leaders to adapt worksite policies and practices to contain or mitigate outbreaks. While many such models have been developed for COVID-19 forecasting at the national, state, county, or city level, only a few models have been developed for workplaces and universities. Furthermore, COVID-19 forecasting models have rarely been validated against real COVID-19 case data. Here we present the systematic parameter fitting and validation of an agent-based compartment model for the forecasting of daily COVID-19 cases in single-site workplaces and universities with real-world data. Our approaches include manual fitting, where initial model parameters are chosen based on historical data, and automated fitting, where parameters are chosen based on candidate case trajectory simulations that result in best fit to prevalence estimation data. We use a 14-day fitting window and validate our approaches on 7- and 14-day testing windows with real COVID-19 case data from one employer. Our manual and automated fitting approaches accurately predicted COVID-19 case trends and outperformed the baseline model (no parameter fitting) across multiple scenarios, including a rising case trajectory (RMSLE values: 2.627 for baseline, 0.562 for manual fitting, 0.399 for automated fitting) and a decreasing case trajectory (RMSLE values: 1.155 for baseline, 0.537 for manual fitting, 0.778 for automated fitting). Our COVID-19 case forecasting model allows decision-makers at workplaces and universities to proactively respond to case trend forecasts, mitigate outbreaks, and promote safety.
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Affiliation(s)
- Vignesh Kumaresan
- Verily Life Sciences, South San Francisco, California, United States of America
| | | | - Sarah F. Poole
- Verily Life Sciences, South San Francisco, California, United States of America
| | - Lance J. Myers
- Verily Life Sciences, South San Francisco, California, United States of America
| | - Paul Varghese
- Verily Life Sciences, South San Francisco, California, United States of America
| | - Vindell Washington
- Verily Life Sciences, South San Francisco, California, United States of America
| | - Yugang Jia
- Verily Life Sciences, South San Francisco, California, United States of America
| | - Vivian S. Lee
- Verily Life Sciences, South San Francisco, California, United States of America
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7
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Pozo-Martin F, Beltran Sanchez MA, Müller SA, Diaconu V, Weil K, El Bcheraoui C. Comparative effectiveness of contact tracing interventions in the context of the COVID-19 pandemic: a systematic review. Eur J Epidemiol 2023; 38:243-266. [PMID: 36795349 PMCID: PMC9932408 DOI: 10.1007/s10654-023-00963-z] [Citation(s) in RCA: 9] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2022] [Accepted: 12/31/2022] [Indexed: 02/17/2023]
Abstract
Contact tracing is a non-pharmaceutical intervention (NPI) widely used in the control of the COVID-19 pandemic. Its effectiveness may depend on a number of factors including the proportion of contacts traced, delays in tracing, the mode of contact tracing (e.g. forward, backward or bidirectional contact training), the types of contacts who are traced (e.g. contacts of index cases or contacts of contacts of index cases), or the setting where contacts are traced (e.g. the household or the workplace). We performed a systematic review of the evidence regarding the comparative effectiveness of contact tracing interventions. 78 studies were included in the review, 12 observational (ten ecological studies, one retrospective cohort study and one pre-post study with two patient cohorts) and 66 mathematical modelling studies. Based on the results from six of the 12 observational studies, contact tracing can be effective at controlling COVID-19. Two high quality ecological studies showed the incremental effectiveness of adding digital contact tracing to manual contact tracing. One ecological study of intermediate quality showed that increases in contact tracing were associated with a drop in COVID-19 mortality, and a pre-post study of acceptable quality showed that prompt contact tracing of contacts of COVID-19 case clusters / symptomatic individuals led to a reduction in the reproduction number R. Within the seven observational studies exploring the effectiveness of contact tracing in the context of the implementation of other non-pharmaceutical interventions, contact tracing was found to have an effect on COVID-19 epidemic control in two studies and not in the remaining five studies. However, a limitation in many of these studies is the lack of description of the extent of implementation of contact tracing interventions. Based on the results from the mathematical modelling studies, we identified the following highly effective policies: (1) manual contact tracing with high tracing coverage and either medium-term immunity, highly efficacious isolation/quarantine and/ or physical distancing (2) hybrid manual and digital contact tracing with high app adoption with highly effective isolation/ quarantine and social distancing, (3) secondary contact tracing, (4) eliminating contact tracing delays, (5) bidirectional contact tracing, (6) contact tracing with high coverage in reopening educational institutions. We also highlighted the role of social distancing to enhance the effectiveness of some of these interventions in the context of 2020 lockdown reopening. While limited, the evidence from observational studies shows a role for manual and digital contact tracing in controlling the COVID-19 epidemic. More empirical studies accounting for the extent of contact tracing implementation are required.
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Affiliation(s)
- Francisco Pozo-Martin
- Evidence-based Public Health Unit, Centre for International Health Protection, Robert Koch Institute, Nordufer 20, 13353, Berlin, Germany.
| | | | - Sophie Alice Müller
- Centre for International Health Protection, Robert Koch Institute, Nordufer 20, 13353, Berlin, Germany
| | - Viorela Diaconu
- Evidence-based Public Health Unit, Centre for International Health Protection, Robert Koch Institute, Nordufer 20, 13353, Berlin, Germany
| | - Kilian Weil
- Evidence-based Public Health Unit, Centre for International Health Protection, Robert Koch Institute, Nordufer 20, 13353, Berlin, Germany
| | - Charbel El Bcheraoui
- Evidence-based Public Health Unit, Centre for International Health Protection, Robert Koch Institute, Nordufer 20, 13353, Berlin, Germany
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8
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Modeling community COVID-19 transmission risk associated with U.S. universities. Sci Rep 2023; 13:1428. [PMID: 36697468 PMCID: PMC9875777 DOI: 10.1038/s41598-023-28212-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/27/2022] [Accepted: 01/16/2023] [Indexed: 01/26/2023] Open
Abstract
The ongoing COVID-19 pandemic is among the worst in recent history, resulting in excess of 520,000,000 cases and 6,200,000 deaths worldwide. The United States (U.S.) has recently surpassed 1,000,000 deaths. Individuals who are elderly and/or immunocompromised are the most susceptible to serious sequelae. Rising sentiment often implicates younger, less-vulnerable populations as primary introducers of COVID-19 to communities, particularly around colleges and universities. Adjusting for more than 32 key socio-demographic, economic, and epidemiologic variables, we (1) implemented regressions to determine the overall community-level, age-adjusted COVID-19 case and mortality rate within each American county, and (2) performed a subgroup analysis among a sample of U.S. colleges and universities to identify any significant preliminary mitigation measures implemented during the fall 2020 semester. From January 1, 2020 through March 31, 2021, a total of 22,385,335 cases and 374,130 deaths were reported to the CDC. Overall, counties with increasing numbers of university enrollment showed significantly lower case rates and marginal decreases in mortality rates. County-level population demographics, and not university level mitigation measures, were the most significant predictor of adjusted COVID-19 case rates. Contrary to common sentiment, our findings demonstrate that counties with high university enrollments may be more adherent to public safety measures and vaccinations, likely contributing to safer communities.
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9
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Truszkowska A, Zino L, Butail S, Caroppo E, Jiang Z, Rizzo A, Porfiri M. Exploring a COVID-19 Endemic Scenario: High-Resolution Agent-Based Modeling of Multiple Variants. ADVANCED THEORY AND SIMULATIONS 2023; 6:2200481. [PMID: 36718198 PMCID: PMC9878004 DOI: 10.1002/adts.202200481] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/04/2022] [Revised: 09/29/2022] [Indexed: 11/13/2022]
Abstract
Our efforts as a society to combat the ongoing COVID-19 pandemic are continuously challenged by the emergence of new variants. These variants can be more infectious than existing strains and many of them are also more resistant to available vaccines. The appearance of these new variants cause new surges of infections, exacerbated by infrastructural difficulties, such as shortages of medical personnel or test kits. In this work, a high-resolution computational framework for modeling the simultaneous spread of two COVID-19 variants: a widely spread base variant and a new one, is established. The computational framework consists of a detailed database of a representative U.S. town and a high-resolution agent-based model that uses the Omicron variant as the base variant and offers flexibility in the incorporation of new variants. The results suggest that the spread of new variants can be contained with highly efficacious tests and mild loss of vaccine protection. However, the aggressiveness of the ongoing Omicron variant and the current waning vaccine immunity point to an endemic phase of COVID-19, in which multiple variants will coexist and residents continue to suffer from infections.
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Affiliation(s)
- Agnieszka Truszkowska
- Center for Urban Science and ProgressTandon School of EngineeringNew York University370 Jay StreetBrooklynNY11201USA
- Department of Mechanical and Aerospace EngineeringTandon School of EngineeringNew York UniversitySix MetroTech CenterBrooklynNY11201USA
- Department of Chemical and Materials EngineeringUniversity of Alabama in Huntsville301 Sparkman DriveHuntsvilleAL35899USA
| | - Lorenzo Zino
- Engineering and Technology Institute GroningenUniversity of GroningenNijenborgh 4GroningenAG9747The Netherlands
- Department of Electronics and TelecommunicationsPolitecnico di TorinoCorso Duca degli Abruzzi 24Turin10129Italy
| | - Sachit Butail
- Department of Mechanical EngineeringNorthern Illinois UniversityDeKalbIL60115USA
| | - Emanuele Caroppo
- Department of Mental HealthLocal Health Unit ROMA 2Rome00159Italy
- University Research Center He.R.A.Université Cattolica del Sacro CuoreRome00168Italy
| | - Zhong‐Ping Jiang
- Department of Electrical and Computer EngineeringTandon School of EngineeringNew York University370 Jay StreetBrooklynNY11201USA
| | - Alessandro Rizzo
- Department of Electronics and TelecommunicationsPolitecnico di TorinoCorso Duca degli Abruzzi 24Turin10129Italy
- Institute for InventionInnovation and EntrepreneurshipTandon School of EngineeringNew York UniversitySix MetroTech CenterBrooklynNY11201USA
| | - Maurizio Porfiri
- Center for Urban Science and ProgressTandon School of EngineeringNew York University370 Jay StreetBrooklynNY11201USA
- Department of Mechanical and Aerospace EngineeringTandon School of EngineeringNew York UniversitySix MetroTech CenterBrooklynNY11201USA
- Department of Biomedical EngineeringTandon School of EngineeringNew York UniversitySix MetroTech CenterBrooklynNY11201USA
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10
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Zhao L, Santiago F, Rutter EM, Khatri S, Sindi SS. Modeling and Global Sensitivity Analysis of Strategies to Mitigate Covid-19 Transmission on a Structured College Campus. Bull Math Biol 2023; 85:13. [PMID: 36637563 PMCID: PMC9837465 DOI: 10.1007/s11538-022-01107-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/02/2022] [Accepted: 11/13/2022] [Indexed: 01/14/2023]
Abstract
In response to the COVID-19 pandemic, many higher educational institutions moved their courses on-line in hopes of slowing disease spread. The advent of multiple highly-effective vaccines offers the promise of a return to "normal" in-person operations, but it is not clear if-or for how long-campuses should employ non-pharmaceutical interventions such as requiring masks or capping the size of in-person courses. In this study, we develop and fine-tune a model of COVID-19 spread to UC Merced's student and faculty population. We perform a global sensitivity analysis to consider how both pharmaceutical and non-pharmaceutical interventions impact disease spread. Our work reveals that vaccines alone may not be sufficient to eradicate disease dynamics and that significant contact with an infectious surrounding community will maintain infections on-campus. Our work provides a foundation for higher-education planning allowing campuses to balance the benefits of in-person instruction with the ability to quarantine/isolate infectious individuals.
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Affiliation(s)
- Lihong Zhao
- Department of Applied Mathematics, University of California, Merced, 5200 North Lake Rd., Merced, CA 95343 USA
| | - Fabian Santiago
- Department of Applied Mathematics, University of California, Merced, 5200 North Lake Rd., Merced, CA 95343 USA
| | - Erica M. Rutter
- Department of Applied Mathematics, University of California, Merced, 5200 North Lake Rd., Merced, CA 95343 USA ,Health Sciences Research Institute, University of California, Merced, 5200 North Lake Rd., Merced, CA 95343 USA
| | - Shilpa Khatri
- Department of Applied Mathematics, University of California, Merced, 5200 North Lake Rd., Merced, CA 95343 USA ,Health Sciences Research Institute, University of California, Merced, 5200 North Lake Rd., Merced, CA 95343 USA
| | - Suzanne S. Sindi
- Department of Applied Mathematics, University of California, Merced, 5200 North Lake Rd., Merced, CA 95343 USA ,Health Sciences Research Institute, University of California, Merced, 5200 North Lake Rd., Merced, CA 95343 USA
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11
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Baskak D, Ozbey S, Yucesan M, Gul M. COVID-19 safe campus evaluation for universities by a hybrid interval type-2 fuzzy decision-making model. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2023; 30:8133-8153. [PMID: 36056282 PMCID: PMC9438885 DOI: 10.1007/s11356-022-22796-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 04/25/2022] [Accepted: 08/26/2022] [Indexed: 06/15/2023]
Abstract
The fight against the COVID-19 pandemic, which has affected the whole world in recent years and has had devastating effects on all segments of society, has been one of the most important priorities. The Turkish Standards Institution has determined a checklist to contribute to developing safe and clean environments in higher education institutions in Turkey and to follow-up on infection control measures. However, this study is only a checklist that makes it necessary for decision-makers to make a subjective evaluation during the evaluation process, while the need to develop a more effective, systematic framework that takes into account the importance levels of multiple criteria has emerged. Therefore, this study applies the best-worst method under interval type-2 fuzzy set concept (IT2F-BWM) to determine the importance levels of criteria affecting the "COVID-19 safe campus" evaluation of universities in the context of global pandemic. A three-level hierarchy consisting of three main criteria, 11 sub-criteria, and 58 sub-criteria has been created for this aim. Considering the hierarchy, the most important sub-criterion was determined as periodic disinfection. The high contribution of the interval-valued type-2 fuzzy sets in expressing the uncertainty in the decision-makers' evaluations and the fact that BWM provides criterion weights with a mathematical optimization model that produces less pairwise comparisons and higher consistency are the main factors in choosing this approach. Simple additive weighting (SAW) has also been injected into the IT2F-BWM to determine the safety level of any university campus regarding COVID-19. Thus, decision-makers will be better prepared for the devastating effects of the pandemic by first improving the factors that are relatively important in the fight against the pandemic. In addition, a threshold value will be determined by considering all criteria, and it will prepare the ground for a road map for campuses. A case study is employed to apply the proposed model, and a comparison study is also presented with the Bayesian BWM to validate the results of the criteria weights.
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Affiliation(s)
- Dilber Baskak
- Faculty of Health Sciences, Department of Emergency Aid and Disaster Management, Munzur University, Tunceli, Turkey
| | - Sumeyye Ozbey
- Faculty of Health Sciences, Department of Emergency Aid and Disaster Management, Munzur University, Tunceli, Turkey
| | - Melih Yucesan
- Faculty of Health Sciences, Department of Emergency Aid and Disaster Management, Munzur University, Tunceli, Turkey
| | - Muhammet Gul
- School of Transportation and Logistics, Istanbul University, 34320 Avcılar-Istanbul, Turkey
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12
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Does receiving a SARS-CoV-2 antibody test result change COVID-19 protective behaviors? Testing risk compensation in undergraduate students with a randomized controlled trial. PLoS One 2022; 17:e0279347. [PMID: 36538498 PMCID: PMC9767325 DOI: 10.1371/journal.pone.0279347] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2022] [Accepted: 11/02/2022] [Indexed: 12/24/2022] Open
Abstract
BACKGROUND Risk compensation, or matching behavior to a perceived level of acceptable risk, can blunt the effectiveness of public health interventions. One area of possible risk compensation during the SARS-CoV-2 pandemic is antibody testing. While antibody tests are imperfect measures of immunity, results may influence risk perception and individual preventive actions. We conducted a randomized control trial to assess whether receiving antibody test results changed SARS-CoV-2 protective behaviors. PURPOSE Assess whether objective information about antibody status, particularly for those who are antibody negative and likely still susceptible to SARS-CoV-2 infection, increases protective behaviors. Secondarily, assess whether a positive antibody test results in decreased protective behaviors. METHODS In September 2020, we enrolled 1076 undergraduate students, used fingerstick tests for SARS-CoV-2 antibodies, and randomized participants to receive their results immediately or delayed by 4 weeks. Two weeks later, participants completed a survey about their engagement in 4 protective behaviors (mask use, social event avoidance, staying home from work/school, ensuring physical distancing). We estimated differences between conditions for each of these behaviors, stratified by antibody status. For negative participants at baseline, we also estimated the difference between conditions for seroconversion over 8 weeks of follow-up. RESULTS For the antibody negative participants (n = 1029) and antibody positive participants (n = 47), we observed no significant differences in protective behavior engagement between those who were randomized to receive test results immediately or after 4 weeks. For the baseline antibody negative participants, we also observed no difference in seroconversion outcomes between conditions. CONCLUSIONS We found that receiving antibody test results did not lead to significant behavior change in undergraduate students whether the SARS-CoV-2 antibody result was positive or negative.
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Ruth W, Lockhart R. SARS-CoV-2 transmission in university classes. NETWORK MODELING ANALYSIS IN HEALTH INFORMATICS AND BIOINFORMATICS 2022; 11:32. [PMID: 36061223 PMCID: PMC9419647 DOI: 10.1007/s13721-022-00375-1] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/11/2022] [Revised: 07/29/2022] [Accepted: 08/10/2022] [Indexed: 11/27/2022]
Abstract
We investigate transmission dynamics for SARS-CoV-2 on a real network of classes at Simon Fraser University. Outbreaks are simulated over the course of one semester across numerous parameter settings, including moving classes above certain size thresholds online. Regression trees are used to analyze the effect of disease parameters on simulation outputs. We find that an aggressive class size thresholding strategy is required to mitigate the risk of a large outbreak, and that transmission by symptomatic individuals is a key driver of outbreak size. These findings provide guidance for designing control strategies at other institutions, as well as setting priorities and allocating resources for disease monitoring.
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Affiliation(s)
- William Ruth
- Department of Statistics and Actuarial Science, Simon Fraser University, Burnaby, BC Canada
| | - Richard Lockhart
- Department of Statistics and Actuarial Science, Simon Fraser University, Burnaby, BC Canada
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14
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Ghaffarzadegan N. Effect of mandating vaccination on COVID-19 cases in colleges and universities. Int J Infect Dis 2022; 123:41-45. [PMID: 35985570 PMCID: PMC9381420 DOI: 10.1016/j.ijid.2022.08.004] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/20/2022] [Revised: 06/14/2022] [Accepted: 08/07/2022] [Indexed: 12/14/2022] Open
Abstract
BACKGROUND With the introduction of COVID-19 vaccines, many colleges and universities decided to mandate vaccination for all students and employees. The objective of this paper is to empirically investigate the effect of the mandate policy on Fall 2021 COVID-19 cases in institutions of higher education. METHOD We construct a unique dataset of a sample of 94 colleges and universities in the east and southeast regions of the United States, 41 of which required vaccination prior to Fall 2021. A difference-in-differences analysis is conducted, considering vaccine requirement as a policy implemented only in a sub-group of these institutions. We control for several factors, including state-level case per capita and student population. RESULTS Our analysis shows that mandatory vaccination substantially decreased cases in institutions of higher education by 1,473 cases per 100,000 student population (95 CI: 132, 2813). CONCLUSIONS The results suggest that a COVID-19 vaccine requirement is an effective policy in decreasing cases in such institutions, leading to a safer educational experience.
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15
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Cator D, Huang Q, Mondal A, Ndeffo-Mbah M, Gurarie D. Individual-based modeling of COVID-19 transmission in college communities. MATHEMATICAL BIOSCIENCES AND ENGINEERING : MBE 2022; 19:13861-13877. [PMID: 36654071 DOI: 10.3934/mbe.2022646] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/17/2023]
Abstract
The ongoing COVID-19 pandemic has created major public health and socio-economic challenges across the United States. Among them are challenges to the educational system where college administrators are struggling with the questions of how to mitigate the risk and spread of diseases on their college campus. To help address this challenge, we developed a flexible computational framework to model the spread and control of COVID-19 on a residential college campus. The modeling framework accounts for heterogeneity in social interactions, activities, environmental and behavioral risk factors, disease progression, and control interventions. The contribution of mitigation strategies to disease transmission was explored without and with interventions such as vaccination, quarantine of symptomatic cases, and testing. We show that even with high vaccination coverage (90%) college campuses may still experience sizable outbreaks. The size of the outbreaks varies with the underlying environmental and socio-behavioral risk factors. Complementing vaccination with quarantine and mass testing was shown to be paramount for preventing or mitigating outbreaks. Though our quantitative results are likely provisional on our model assumptions, sensitivity analysis confirms the robustness of their qualitative nature.
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Affiliation(s)
- Durward Cator
- Department of Electrical and Computer Engineering, Texas A & M University, College Station, TX 77840, USA
| | - Qimin Huang
- Department of Mathematics, Applied Mathematics, and Statistics, Case Western Reserve University, Cleveland, OH 44106, USA
| | - Anirban Mondal
- Department of Mathematics, Applied Mathematics, and Statistics, Case Western Reserve University, Cleveland, OH 44106, USA
| | - Martial Ndeffo-Mbah
- Department of Veterinary and Integrative Biosciences, College of Veterinary and Biomedical Sciences, Texas A & M University, College Station, TX 77840, USA
| | - David Gurarie
- Department of Mathematics, Applied Mathematics, and Statistics, Case Western Reserve University, Cleveland, OH 44106, USA
- Center for Global Health and Diseases, School of Medicine, Case Western Reserve University, Cleveland, OH 44106, USA
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16
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Zhang W, Liu S, Osgood N, Zhu H, Qian Y, Jia P. Using simulation modelling and systems science to help contain COVID-19: A systematic review. SYSTEMS RESEARCH AND BEHAVIORAL SCIENCE 2022; 40:SRES2897. [PMID: 36245570 PMCID: PMC9538520 DOI: 10.1002/sres.2897] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/27/2021] [Revised: 05/23/2022] [Accepted: 08/03/2022] [Indexed: 06/16/2023]
Abstract
This study systematically reviews applications of three simulation approaches, that is, system dynamics model (SDM), agent-based model (ABM) and discrete event simulation (DES), and their hybrids in COVID-19 research and identifies theoretical and application innovations in public health. Among the 372 eligible papers, 72 focused on COVID-19 transmission dynamics, 204 evaluated both pharmaceutical and non-pharmaceutical interventions, 29 focused on the prediction of the pandemic and 67 investigated the impacts of COVID-19. ABM was used in 275 papers, followed by 54 SDM papers, 32 DES papers and 11 hybrid model papers. Evaluation and design of intervention scenarios are the most widely addressed area accounting for 55% of the four main categories, that is, the transmission of COVID-19, prediction of the pandemic, evaluation and design of intervention scenarios and societal impact assessment. The complexities in impact evaluation and intervention design demand hybrid simulation models that can simultaneously capture micro and macro aspects of the socio-economic systems involved.
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Affiliation(s)
- Weiwei Zhang
- Research Institute of Economics and ManagementSouthwestern University of Finance and EconomicsChengduChina
| | - Shiyong Liu
- Institute of Advanced Studies in Humanities and Social SciencesBeijing Normal University at ZhuhaiZhuhaiChina
| | - Nathaniel Osgood
- Department of Computer ScienceUniversity of SaskatchewanSaskatoonCanada
- Department of Community Health and EpidemiologyUniversity of SaskatchewanSaskatoonCanada
| | - Hongli Zhu
- Research Institute of Economics and ManagementSouthwestern University of Finance and EconomicsChengduChina
| | - Ying Qian
- Business SchoolUniversity of Shanghai for Science and TechnologyShanghaiChina
| | - Peng Jia
- School of Resource and Environmental SciencesWuhan UniversityWuhanHubeiChina
- International Institute of Spatial Lifecourse HealthWuhan UniversityWuhanHubeiChina
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17
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Dong T, Dong W, Xu Q. Agent Simulation Model of COVID-19 Epidemic Agent-Based on GIS: A Case Study of Huangpu District, Shanghai. INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH 2022; 19:10242. [PMID: 36011877 PMCID: PMC9407715 DOI: 10.3390/ijerph191610242] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/13/2022] [Revised: 08/14/2022] [Accepted: 08/15/2022] [Indexed: 06/15/2023]
Abstract
Since the COVID-19 outbreak was detected and reported at the end of 2019, the pandemic continues worldwide, with public health authorities and the general public in each country struggling to balance safety and normal travel activities. However, the complex public health environment and the complexity of human behaviors, as well as the constant mutation of the COVID-19 virus, requires the development of theoretical and simulation tools to accurately model all segments of society. In this paper, an agent-based model is proposed, the model constructs the real geographical environment of Shanghai Huangpu District based on the building statistics data of Shanghai Huangpu District, and the real population data of Shanghai Huangpu District based on the data of China's seventh Population census in 2020. After incorporating the detailed elements of COVID-19 transmission and the real data of WHO, the model forms various impact parameters. Finally, the model was validated according to the COVID-19 data reported by the official, and the model is applied to a hypothetical scenario. Shanghai is one of the places hardest hit by the current outbreak, Huangpu District is the "heart, window and name card" of Shanghai, and its importance to Shanghai is self-evident. so we used one-to-one population modeling to simulate the spread of COVID-19 in Huangpu District of Shanghai, In addition to the conventional functions of crowd movement, detection and treatment, the model also takes into account the burden of nucleic acid detection on the model caused by diseases similar to COVID-19, such as seasonal cold. The model validation results show that we have constructed a COVID-19 epidemic agent risk assessment system suitable for the individual epidemiological characteristics of COVID-19 in China, which can adjust and reflect on the existing COVID-19 epidemic intervention strategies and individual health behaviors. To provide scientific theoretical basis and information decision-making tools for effective prevention and control of COVID-19 and public health intervention in China.
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Affiliation(s)
- Tao Dong
- School of Information Science and Technology, Yunnan Normal University, Kunming 650500, China
- Faculty of Geography, Yunnan Normal University, Kunming 650500, China
| | - Wen Dong
- Faculty of Geography, Yunnan Normal University, Kunming 650500, China
- GIS Technology Engineering Research Centre for West-China Resources and Environment of Educational Ministry, Yunnan Normal University, Kunming 650500, China
| | - Quanli Xu
- Faculty of Geography, Yunnan Normal University, Kunming 650500, China
- GIS Technology Engineering Research Centre for West-China Resources and Environment of Educational Ministry, Yunnan Normal University, Kunming 650500, China
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18
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Steimle LN, Sun Y, Johnson L, Besedeš T, Mokhtarian P, Nazzal D. Students' preferences for returning to colleges and universities during the COVID-19 pandemic: A discrete choice experiment. SOCIO-ECONOMIC PLANNING SCIENCES 2022; 82:101266. [PMID: 35233122 PMCID: PMC8875867 DOI: 10.1016/j.seps.2022.101266] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/21/2020] [Revised: 09/21/2021] [Accepted: 02/14/2022] [Indexed: 06/14/2023]
Abstract
IMPORTANCE When an emerging infectious disease outbreak occurs, such as COVID-19, institutions of higher education (IHEs) must weigh decisions about how to operate their campuses. These decisions entail whether campuses should remain open, how courses should be delivered (in-person, online, or a mixture of the two), and what safety plans should be enacted for those on campus. These issues have weighed heavily on campus administrators during the on-going COVID-19 pandemic. However, there is still limited knowledge about how such decisions affect students' enrollment decisions and campus safety in practice when considering compliance. OBJECTIVES To assess 1) students' willingness to comply with health protocols and contrast their perception of their classmates' compliance, 2) whether students prefer in-person or online learning during a pandemic, and 3) the importance weights of different aspects of campus operations (i.e., modes of course delivery and safety plans) for students when they decide to enroll or defer. DESIGN SETTING AND PARTICIPANTS An internet-based survey of college students took place from June 25, 2020 to July 10, 2020. Participants included 398 industrial engineering students at the Georgia Institute of Technology, a medium-size public university in Atlanta, Georgia. The survey included a discrete choice experiment with questions that asked students to choose whether to enroll or defer when presented with hypothetical scenarios related to Fall 2020 modes of course delivery and aspects of campus safety. The survey also asked students about expected compliance with health protocols, whether they preferred in-person or online courses, and sociodemographic information. MAIN OUTCOMES AND MEASURES We examine students' willingness to comply with potential health protocols. We estimated logistic regression models to infer significant factors that lead to a student's choice between in-person and online learning. Additionally, we estimated discrete choice models to infer the importance of different modes of course delivery and safety measures to students when deciding to enroll or defer. RESULTS The survey response rate was 20.8%. A latent class model showed three classes of students: those who were "low-concern" (comprising a 29% expected share of the sample), those who were "moderate-concern" (54%) and those who were "high-concern" (17%). We found that scenarios that offered an on-campus experience with large classes delivered online and small classes delivered in-person, strict safety protocols in terms of mask-wearing, testing, and residence halls, and lenient safety protocols in terms of social gatherings were broadly the scenarios with the highest expected enrollment probabilities. The decision to enroll or defer for all students was largely determined by the mode of delivery for courses and the safety measures on campus around COVID-19 testing and mask-wearing. A logistic regression model showed that a higher perceived risk of infection of COVID-19, a more suitable home environment, being older, and being less risk-seeking were significant factors for a person to choose online learning. Students stated for themselves and their classmates that they would comply with some but not all health protocols against COVID-19, especially those limiting social gatherings. CONCLUSIONS AND RELEVANCE The majority of students indicated a preference to enroll during the COVID-19 pandemic so long as sufficient safety measures were put in place and all classes were not entirely in-person. As IHEs consider different options for campus operations during pandemics, they should consider the heterogeneous preferences among their students. Offering flexibility in course modes may be a way to appeal to many students who vary in terms of their concern about the pandemic. At the same time, since students overall preferred some safety measures placed around mask-wearing and COVID-19 testing on campus, IHEs may want to recommend or require wearing masks and doing some surveillance tests for all students, faculty, and staff. Students were expecting themselves and their fellow classmates to comply with some but not all health protocols, which may help IHEs identify protocols that need more education and awareness, like limits on social gatherings and the practice of social distancing at social gatherings.
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Affiliation(s)
- Lauren N Steimle
- H. Milton Stewart School of Industrial and Systems Engineering, Georgia Institute of Technology, United States
| | - Yuming Sun
- H. Milton Stewart School of Industrial and Systems Engineering, Georgia Institute of Technology, United States
| | - Lauren Johnson
- H. Milton Stewart School of Industrial and Systems Engineering, Georgia Institute of Technology, United States
| | - Tibor Besedeš
- School of Economics, Georgia Institute of Technology, United States
| | - Patricia Mokhtarian
- School of Civil and Environmental Engineering, Georgia Institute of Technology, United States
| | - Dima Nazzal
- H. Milton Stewart School of Industrial and Systems Engineering, Georgia Institute of Technology, United States
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19
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Junge M, Li S, Samaranayake S, Zalesak M. Safe reopening of university campuses is possible with COVID-19 vaccination. PLoS One 2022; 17:e0270106. [PMID: 35862302 PMCID: PMC9302728 DOI: 10.1371/journal.pone.0270106] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/29/2021] [Accepted: 06/04/2022] [Indexed: 01/19/2023] Open
Abstract
We construct an agent-based SEIR model to simulate COVID-19 spread at a 16000-student mostly non-residential urban university during the Fall 2021 Semester. We find that mRNA vaccine coverage at 100% combined with weekly screening testing of 25% of the campus population make it possible to safely reopen to in-person instruction. Our simulations exhibit a right-skew for total infections over the semester that becomes more pronounced with less vaccine coverage, less vaccine effectiveness and no additional preventative measures. This suggests that high levels of infection are not exceedingly rare with campus social connections the main transmission route. Finally, we find that if vaccine coverage is 100% and vaccine effectiveness is above 80%, then a safe reopening is possible even without facemask use. This models possible future scenarios with high coverage of additional "booster" doses of COVID-19 vaccines.
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Affiliation(s)
- Matthew Junge
- Department of Mathematics, Baruch College, New York, New York, United States of America
| | - Sheng Li
- School of Public Health, City University of New York, New York, New York, United States of America
| | - Samitha Samaranayake
- School of Civil and Environmental Engineering, Cornell University, Ithaca, New York, United States of America
| | - Matthew Zalesak
- School of Operations Research and Information Engineering, Cornell University, Ithaca, New York, United States of America
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20
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Ranoa DRE, Holland RL, Alnaji FG, Green KJ, Wang L, Fredrickson RL, Wang T, Wong GN, Uelmen J, Maslov S, Weiner ZJ, Tkachenko AV, Zhang H, Liu Z, Ibrahim A, Patel SJ, Paul JM, Vance NP, Gulick JG, Satheesan SP, Galvan IJ, Miller A, Grohens J, Nelson TJ, Stevens MP, Hennessy PM, Parker RC, Santos E, Brackett C, Steinman JD, Fenner MR, Dohrer K, DeLorenzo M, Wilhelm-Barr L, Brauer BR, Best-Popescu C, Durack G, Wetter N, Kranz DM, Breitbarth J, Simpson C, Pryde JA, Kaler RN, Harris C, Vance AC, Silotto JL, Johnson M, Valera EA, Anton PK, Mwilambwe L, Bryan SP, Stone DS, Young DB, Ward WE, Lantz J, Vozenilek JA, Bashir R, Moore JS, Garg M, Cooper JC, Snyder G, Lore MH, Yocum DL, Cohen NJ, Novakofski JE, Loots MJ, Ballard RL, Band M, Banks KM, Barnes JD, Bentea I, Black J, Busch J, Conte A, Conte M, Curry M, Eardley J, Edwards A, Eggett T, Fleurimont J, Foster D, Fouke BW, Gallagher N, Gastala N, Genung SA, Glueck D, Gray B, Greta A, Healy RM, Hetrick A, Holterman AA, Ismail N, Jasenof I, Kelly P, Kielbasa A, Kiesel T, Kindle LM, Lipking RL, Manabe YC, Mayes J́, McGuffin R, McHenry KG, Mirza A, Moseley J, Mostafa HH, Mumford M, Munoz K, Murray AD, Nolan M, Parikh NA, Pekosz A, Pflugmacher J, Phillips JM, Pitts C, Potter MC, Quisenberry J, Rear J, Robinson ML, Rosillo E, Rye LN, Sherwood M, Simon A, Singson JM, Skadden C, Skelton TH, Smith C, Stech M, Thomas R, Tomaszewski MA, Tyburski EA, Vanwingerden S, Vlach E, Watkins RS, Watson K, White KC, Killeen TL, Jones RJ, Cangellaris AC, Martinis SA, Vaid A, Brooke CB, Walsh JT, Elbanna A, Sullivan WC, Smith RL, Goldenfeld N, Fan TM, Hergenrother PJ, Burke MD. Mitigation of SARS-CoV-2 transmission at a large public university. Nat Commun 2022. [DOI: doi.org/10.1038/s41467-022-30833-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023] Open
Abstract
AbstractIn Fall 2020, universities saw extensive transmission of SARS-CoV-2 among their populations, threatening health of the university and surrounding communities, and viability of in-person instruction. Here we report a case study at the University of Illinois at Urbana-Champaign, where a multimodal “SHIELD: Target, Test, and Tell” program, with other non-pharmaceutical interventions, was employed to keep classrooms and laboratories open. The program included epidemiological modeling and surveillance, fast/frequent testing using a novel low-cost and scalable saliva-based RT-qPCR assay for SARS-CoV-2 that bypasses RNA extraction, called covidSHIELD, and digital tools for communication and compliance. In Fall 2020, we performed >1,000,000 covidSHIELD tests, positivity rates remained low, we had zero COVID-19-related hospitalizations or deaths amongst our university community, and mortality in the surrounding Champaign County was reduced more than 4-fold relative to expected. This case study shows that fast/frequent testing and other interventions mitigated transmission of SARS-CoV-2 at a large public university.
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21
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Ranoa DRE, Holland RL, Alnaji FG, Green KJ, Wang L, Fredrickson RL, Wang T, Wong GN, Uelmen J, Maslov S, Weiner ZJ, Tkachenko AV, Zhang H, Liu Z, Ibrahim A, Patel SJ, Paul JM, Vance NP, Gulick JG, Satheesan SP, Galvan IJ, Miller A, Grohens J, Nelson TJ, Stevens MP, Hennessy PM, Parker RC, Santos E, Brackett C, Steinman JD, Fenner MR, Dohrer K, DeLorenzo M, Wilhelm-Barr L, Brauer BR, Best-Popescu C, Durack G, Wetter N, Kranz DM, Breitbarth J, Simpson C, Pryde JA, Kaler RN, Harris C, Vance AC, Silotto JL, Johnson M, Valera EA, Anton PK, Mwilambwe L, Bryan SP, Stone DS, Young DB, Ward WE, Lantz J, Vozenilek JA, Bashir R, Moore JS, Garg M, Cooper JC, Snyder G, Lore MH, Yocum DL, Cohen NJ, Novakofski JE, Loots MJ, Ballard RL, Band M, Banks KM, Barnes JD, Bentea I, Black J, Busch J, Conte A, Conte M, Curry M, Eardley J, Edwards A, Eggett T, Fleurimont J, Foster D, Fouke BW, Gallagher N, Gastala N, Genung SA, Glueck D, Gray B, Greta A, Healy RM, Hetrick A, Holterman AA, Ismail N, Jasenof I, Kelly P, Kielbasa A, Kiesel T, Kindle LM, Lipking RL, Manabe YC, Mayes J, McGuffin R, McHenry KG, Mirza A, Moseley J, Mostafa HH, Mumford M, Munoz K, Murray AD, Nolan M, Parikh NA, Pekosz A, Pflugmacher J, Phillips JM, Pitts C, Potter MC, Quisenberry J, Rear J, Robinson ML, Rosillo E, Rye LN, Sherwood M, Simon A, Singson JM, Skadden C, Skelton TH, Smith C, Stech M, Thomas R, Tomaszewski MA, Tyburski EA, Vanwingerden S, Vlach E, Watkins RS, Watson K, White KC, Killeen TL, Jones RJ, Cangellaris AC, Martinis SA, Vaid A, Brooke CB, Walsh JT, Elbanna A, Sullivan WC, Smith RL, Goldenfeld N, Fan TM, Hergenrother PJ, Burke MD. Mitigation of SARS-CoV-2 transmission at a large public university. Nat Commun 2022; 13:3207. [PMID: 35680861 PMCID: PMC9184485 DOI: 10.1038/s41467-022-30833-3] [Citation(s) in RCA: 12] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/13/2021] [Accepted: 05/19/2022] [Indexed: 11/09/2022] Open
Abstract
In Fall 2020, universities saw extensive transmission of SARS-CoV-2 among their populations, threatening health of the university and surrounding communities, and viability of in-person instruction. Here we report a case study at the University of Illinois at Urbana-Champaign, where a multimodal “SHIELD: Target, Test, and Tell” program, with other non-pharmaceutical interventions, was employed to keep classrooms and laboratories open. The program included epidemiological modeling and surveillance, fast/frequent testing using a novel low-cost and scalable saliva-based RT-qPCR assay for SARS-CoV-2 that bypasses RNA extraction, called covidSHIELD, and digital tools for communication and compliance. In Fall 2020, we performed >1,000,000 covidSHIELD tests, positivity rates remained low, we had zero COVID-19-related hospitalizations or deaths amongst our university community, and mortality in the surrounding Champaign County was reduced more than 4-fold relative to expected. This case study shows that fast/frequent testing and other interventions mitigated transmission of SARS-CoV-2 at a large public university. Safely opening university campuses has been a major challenge during the COVID-19 pandemic. Here, the authors describe a program of public health measures employed at a university in the United States which, combined with other non-pharmaceutical interventions, allowed the university to stay open in fall 2020 with limited evidence of transmission.
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Affiliation(s)
- Diana Rose E Ranoa
- Department of Chemistry, University of Illinois at Urbana-Champaign, Urbana, IL, USA.,Carl R. Woese Institute for Genomic Biology, University of Illinois at Urbana Champaign, Urbana, IL, USA.,Cancer Center at Illinois, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Robin L Holland
- Department of Veterinary Clinical Medicine, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Fadi G Alnaji
- Department of Microbiology, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Kelsie J Green
- Department of Chemistry, University of Illinois at Urbana-Champaign, Urbana, IL, USA.,Carle Illinois College of Medicine, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Leyi Wang
- Veterinary Diagnostic Laboratory, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Richard L Fredrickson
- Veterinary Diagnostic Laboratory, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Tong Wang
- Department of Physics, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - George N Wong
- Department of Physics, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Johnny Uelmen
- Department of Pathobiology, College of Veterinary Medicine, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Sergei Maslov
- Carl R. Woese Institute for Genomic Biology, University of Illinois at Urbana Champaign, Urbana, IL, USA.,Department of Physics, University of Illinois at Urbana-Champaign, Urbana, IL, USA.,Department of Bioengineering, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Zachary J Weiner
- Department of Physics, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Alexei V Tkachenko
- Center for Functional Nanomaterials, Brookhaven National Laboratory, Upton, NY, USA
| | - Hantao Zhang
- Computer Science, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Zhiru Liu
- Department of Physics, Stanford University, Palo Alto, CA, USA
| | - Ahmed Ibrahim
- Department of Civil and Environmental Engineering, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Sanjay J Patel
- Department of Electrical and Computer Engineering, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - John M Paul
- Grainger College of Engineering, University of Illinois Urbana-Champaign, Urbana, IL, USA
| | - Nickolas P Vance
- Technology Services, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Joseph G Gulick
- Technology Services, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | | | - Isaac J Galvan
- Technology Services, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Andrew Miller
- Department of Electrical and Computer Engineering, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Joseph Grohens
- Department of English, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Todd J Nelson
- Technology Services, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Mary P Stevens
- Technology Services, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | | | - Robert C Parker
- McKinley Health Center, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | | | | | - Julie D Steinman
- Veterinary Diagnostic Laboratory, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Melvin R Fenner
- McKinley Health Center, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Kirstin Dohrer
- Veterinary Diagnostic Laboratory, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Michael DeLorenzo
- Office of the Chancellor, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Laura Wilhelm-Barr
- Office of the Chancellor, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | | | - Catherine Best-Popescu
- Department of Bioengineering, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Gary Durack
- Grainger College of Engineering, University of Illinois Urbana-Champaign, Urbana, IL, USA.,Tekmill, Champaign, IL, USA
| | | | - David M Kranz
- Department of Biochemistry, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Jessica Breitbarth
- Carle Illinois College of Medicine, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Charlie Simpson
- Carle Illinois College of Medicine, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Julie A Pryde
- Champaign-Urbana Public Health District, Champaign, IL, USA
| | - Robin N Kaler
- Public Affairs, College of Media, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Chris Harris
- Public Affairs, College of Media, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Allison C Vance
- Public Affairs, College of Media, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Jodi L Silotto
- Public Affairs, College of Media, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Mark Johnson
- Carle Illinois College of Medicine, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Enrique Andres Valera
- Department of Bioengineering, University of Illinois at Urbana-Champaign, Urbana, IL, USA.,Grainger College of Engineering, University of Illinois Urbana-Champaign, Urbana, IL, USA
| | - Patricia K Anton
- Housing Division, University of Illinois Urbana-Champaign, Urbana, IL, USA
| | - Lowa Mwilambwe
- Office of the Vice Chancellor for Student Affairs, University of Illinois Urbana-Champaign, Urbana, IL, USA
| | - Stephen P Bryan
- Office of the Dean of Students, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Deborah S Stone
- Beckman Institute for Advanced Science and Technology, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Danita B Young
- Office of the Vice Chancellor for Student Affairs, University of Illinois Urbana-Champaign, Urbana, IL, USA
| | - Wanda E Ward
- Office of the Chancellor, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - John Lantz
- Office of the Dean of Students, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - John A Vozenilek
- Grainger College of Engineering, University of Illinois Urbana-Champaign, Urbana, IL, USA
| | - Rashid Bashir
- Grainger College of Engineering, University of Illinois Urbana-Champaign, Urbana, IL, USA
| | - Jeffrey S Moore
- Carl R. Woese Institute for Genomic Biology, University of Illinois at Urbana Champaign, Urbana, IL, USA.,Beckman Institute for Advanced Science and Technology, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Mayank Garg
- Beckman Institute for Advanced Science and Technology, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Julian C Cooper
- Beckman Institute for Advanced Science and Technology, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Gillian Snyder
- Interdisciplinary Health Sciences Institute, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Michelle H Lore
- Interdisciplinary Health Sciences Institute, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Dustin L Yocum
- Office for the Protection of Human Subjects, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Neal J Cohen
- Office of the Dean of Students, University of Illinois at Urbana-Champaign, Urbana, IL, USA.,Department of Psychology, University of Illinois Urbana-Champaign, Urbana, IL, USA
| | - Jan E Novakofski
- College of Agricultural, Consumer and Environmental Sciences, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Melanie J Loots
- Office of the Vice Chancellor for Research and Innovation, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Randy L Ballard
- Department of Intercollegiate Athletics, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Mark Band
- Carver Biotechnology Center, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Kayla M Banks
- Carle Illinois College of Medicine, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Joseph D Barnes
- Mile Square Health Center, University of Illinois Health, Chicago, IL, USA
| | - Iuliana Bentea
- Department of Pathology, College of Medicine, University of Illinois at Chicago, Chicago, IL, USA
| | - Jessica Black
- Illinois Human Resources, University of Illinois Urbana-Champaign, Urbana, IL, USA
| | - Jeremy Busch
- Department of Intercollegiate Athletics, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Abigail Conte
- W. Harry Feinstone Department of Molecular Microbiology and Immunology, Johns Hopkins Bloomberg School of Public Health, Baltimore, MD, USA
| | - Madison Conte
- Division of Infectious Diseases, Department of Medicine, Johns Hopkins School of Medicine, Baltimore, MD, USA
| | - Michael Curry
- Illinois Human Resources, University of Illinois Urbana-Champaign, Urbana, IL, USA
| | - Jennifer Eardley
- Carle Illinois College of Medicine, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - April Edwards
- Veterinary Diagnostic Laboratory, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Therese Eggett
- Veterinary Diagnostic Laboratory, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Judes Fleurimont
- Mile Square Health Center, University of Illinois Health, Chicago, IL, USA
| | - Delaney Foster
- Division of Campus Recreation, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Bruce W Fouke
- Carl R. Woese Institute for Genomic Biology, University of Illinois at Urbana Champaign, Urbana, IL, USA.,Department of Microbiology, University of Illinois at Urbana-Champaign, Urbana, IL, USA.,Carver Biotechnology Center, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Nicholas Gallagher
- Division of Medical Microbiology, Department of Pathology, Johns Hopkins University School of Medicine, Baltimore, MD, USA
| | - Nicole Gastala
- W. Harry Feinstone Department of Molecular Microbiology and Immunology, Johns Hopkins Bloomberg School of Public Health, Baltimore, MD, USA
| | - Scott A Genung
- Office of the Chief Info Officer, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Declan Glueck
- Illinois Human Resources, University of Illinois Urbana-Champaign, Urbana, IL, USA
| | - Brittani Gray
- Mile Square Health Center, University of Illinois Health, Chicago, IL, USA
| | - Andrew Greta
- University of Illinois System Office, Urbana, IL, USA
| | - Robert M Healy
- Carle Illinois College of Medicine, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Ashley Hetrick
- University Health Services, University of Wisconsin-Madison, Madison, WI, USA
| | - Arianna A Holterman
- Office of the Dean of Students, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Nahed Ismail
- Department of Pathology, College of Medicine, University of Illinois at Chicago, Chicago, IL, USA
| | - Ian Jasenof
- Mile Square Health Center, University of Illinois Health, Chicago, IL, USA
| | - Patrick Kelly
- University Health Services, University of Wisconsin-Madison, Madison, WI, USA
| | - Aaron Kielbasa
- Office of the Chancellor, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Teresa Kiesel
- University Health Services, University of Wisconsin-Madison, Madison, WI, USA
| | - Lorenzo M Kindle
- Technology Services, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Rhonda L Lipking
- Carver Biotechnology Center, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Yukari C Manabe
- Division of Infectious Diseases, Department of Medicine, Johns Hopkins School of Medicine, Baltimore, MD, USA
| | - Jade Mayes
- Department of Intercollegiate Athletics, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Reubin McGuffin
- Carle Illinois College of Medicine, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Kenton G McHenry
- National Center for Supercomputing Applications, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Agha Mirza
- Division of Infectious Diseases, Department of Medicine, Johns Hopkins School of Medicine, Baltimore, MD, USA
| | - Jada Moseley
- Illinois Human Resources, University of Illinois Urbana-Champaign, Urbana, IL, USA
| | - Heba H Mostafa
- Division of Medical Microbiology, Department of Pathology, Johns Hopkins University School of Medicine, Baltimore, MD, USA
| | - Melody Mumford
- Mile Square Health Center, University of Illinois Health, Chicago, IL, USA
| | - Kathleen Munoz
- Mile Square Health Center, University of Illinois Health, Chicago, IL, USA
| | - Arika D Murray
- Illinois Human Resources, University of Illinois Urbana-Champaign, Urbana, IL, USA
| | - Moira Nolan
- Office of Corporate Relations, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Nil A Parikh
- Beckman Institute for Advanced Science and Technology, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Andrew Pekosz
- W. Harry Feinstone Department of Molecular Microbiology and Immunology, Johns Hopkins Bloomberg School of Public Health, Baltimore, MD, USA.,Division of Infectious Diseases, Department of Medicine, Johns Hopkins School of Medicine, Baltimore, MD, USA
| | - Janna Pflugmacher
- University Administration, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Janise M Phillips
- McKinley Health Center, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Collin Pitts
- University Health Services, University of Wisconsin-Madison, Madison, WI, USA
| | - Mark C Potter
- Department of Family and Community Medicine, College of Medicine, University of Illinois at Chicago, Chicago, USA
| | - James Quisenberry
- Division of Student Affairs, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Janelle Rear
- Office of the Vice President for Economic Development and Innovation, University of Illinois System, Urbana, IL, USA
| | - Matthew L Robinson
- Division of Infectious Diseases, Department of Medicine, Johns Hopkins School of Medicine, Baltimore, MD, USA
| | - Edith Rosillo
- Library Department, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Leslie N Rye
- Carver Biotechnology Center, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - MaryEllen Sherwood
- Carle Illinois College of Medicine, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Anna Simon
- Office of the Chancellor, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Jamie M Singson
- Division of Student Affairs, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Carly Skadden
- Carle Illinois College of Medicine, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Tina H Skelton
- Carver Biotechnology Center, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Charlie Smith
- Veterinary Diagnostic Laboratory, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Mary Stech
- McKinley Health Center, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Ryan Thomas
- Office of the Chief Info Officer, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | | | - Erika A Tyburski
- Atlanta Center for Microsystems Engineered Point-of-Care Technologies, Emory University School of Medicine, Children's Healthcare of Atlanta, and Georgia Institute of Technology, Atlanta, GA, USA.,Georgia Institute of Technology, Institute for Electronics and Nanotechnology, Atlanta, GA, USA
| | - Scott Vanwingerden
- IT Service Delivery, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Evette Vlach
- Veterinary Diagnostic Laboratory, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Ronald S Watkins
- University of Illinois System Office, Urbana, IL, USA.,Office of the President, University of Illinois System, Urbana, IL, USA
| | - Karriem Watson
- Mile Square Health Center, University of Illinois Health, Chicago, IL, USA
| | - Karen C White
- Carle Illinois College of Medicine, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Timothy L Killeen
- Gies College of Business, University of Illinois Urbana-Champaign, Urbana, IL, USA
| | - Robert J Jones
- Office of the Chancellor, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | | | - Susan A Martinis
- Office of the Vice Chancellor for Research and Innovation, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Awais Vaid
- Champaign-Urbana Public Health District, Champaign, IL, USA
| | - Christopher B Brooke
- Carl R. Woese Institute for Genomic Biology, University of Illinois at Urbana Champaign, Urbana, IL, USA.,Department of Microbiology, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Joseph T Walsh
- Library Department, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Ahmed Elbanna
- Department of Civil and Environmental Engineering, University of Illinois at Urbana-Champaign, Urbana, IL, USA. .,Beckman Institute for Advanced Science and Technology, University of Illinois at Urbana-Champaign, Urbana, IL, USA.
| | - William C Sullivan
- Department of Landscape Architecture, University of Illinois at Urbana-Champaign, Urbana, IL, USA.
| | - Rebecca L Smith
- Carl R. Woese Institute for Genomic Biology, University of Illinois at Urbana Champaign, Urbana, IL, USA. .,Carle Illinois College of Medicine, University of Illinois at Urbana-Champaign, Urbana, IL, USA. .,Department of Pathobiology, College of Veterinary Medicine, University of Illinois at Urbana-Champaign, Urbana, IL, USA. .,National Center for Supercomputing Applications, University of Illinois at Urbana-Champaign, Urbana, IL, USA.
| | - Nigel Goldenfeld
- Carl R. Woese Institute for Genomic Biology, University of Illinois at Urbana Champaign, Urbana, IL, USA. .,Department of Physics, University of Illinois at Urbana-Champaign, Urbana, IL, USA. .,Department of Physics, University of California San Diego, La Jolla, CA, 92093, USA.
| | - Timothy M Fan
- Cancer Center at Illinois, University of Illinois at Urbana-Champaign, Urbana, IL, USA. .,Department of Veterinary Clinical Medicine, University of Illinois at Urbana-Champaign, Urbana, IL, USA.
| | - Paul J Hergenrother
- Department of Chemistry, University of Illinois at Urbana-Champaign, Urbana, IL, USA. .,Carl R. Woese Institute for Genomic Biology, University of Illinois at Urbana Champaign, Urbana, IL, USA. .,Cancer Center at Illinois, University of Illinois at Urbana-Champaign, Urbana, IL, USA.
| | - Martin D Burke
- Department of Chemistry, University of Illinois at Urbana-Champaign, Urbana, IL, USA. .,Carl R. Woese Institute for Genomic Biology, University of Illinois at Urbana Champaign, Urbana, IL, USA. .,Cancer Center at Illinois, University of Illinois at Urbana-Champaign, Urbana, IL, USA. .,Carle Illinois College of Medicine, University of Illinois at Urbana-Champaign, Urbana, IL, USA. .,Department of Biochemistry, University of Illinois at Urbana-Champaign, Urbana, IL, USA. .,Beckman Institute for Advanced Science and Technology, University of Illinois at Urbana-Champaign, Urbana, IL, USA.
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22
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Wright J, Driver EM, Bowes DA, Johnston B, Halden RU. Comparison of high-frequency in-pipe SARS-CoV-2 wastewater-based surveillance to concurrent COVID-19 random clinical testing on a public U.S. university campus. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022; 820:152877. [PMID: 34998780 PMCID: PMC8732902 DOI: 10.1016/j.scitotenv.2021.152877] [Citation(s) in RCA: 28] [Impact Index Per Article: 14.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/07/2021] [Revised: 12/29/2021] [Accepted: 12/30/2021] [Indexed: 05/14/2023]
Abstract
Wastewater-based epidemiology (WBE) is utilized globally as a tool for quantifying the amount of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) within communities, yet the efficacy of community-level wastewater monitoring has yet to be directly compared to random Coronavirus Disease of 2019 (COVID-19) clinical testing; the best-supported method of virus surveillance within a single population. This study evaluated the relationship between SARS-CoV-2 RNA in raw wastewater and random COVID-19 clinical testing on a large university campus in the Southwestern United States during the Fall 2020 semester. Daily composites of wastewater (24-hour samples) were collected three times per week at two campus locations from 16 August 2020 to 1 January 2021 (n = 95) and analyzed by reverse transcriptase-quantitative polymerase chain reaction (RT-qPCR) targeting the SARS-CoV-2 E gene. Campus populations were estimated using campus resident information and anonymized, unique user Wi-Fi connections. Resultant trends of SARS-CoV-2 RNA levels in wastewater were consistent with local and nationwide pandemic trends showing peaks in infections at the start of the Fall semester in mid-August 2020 and mid-to-late December 2020. A strong positive correlation (r = 0.71 (p < 0.01); n = 15) was identified between random COVID-19 clinical testing and WBE surveillance methods, suggesting that wastewater surveillance has a predictive power similar to that of random clinical testing. Additionally, a comparative cost analysis between wastewater and clinical methods conducted here show that WBE was more cost effective, providing data at 1.7% of the total cost of clinical testing ($6042 versus $338,000, respectively). We conclude that wastewater monitoring of SARS-CoV-2 performed in tandem with random clinical testing can strengthen campus health surveillance, and its economic advantages are maximized when performed routinely as a primary surveillance method, with random clinical testing reserved for an active outbreak situation.
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Affiliation(s)
- Jillian Wright
- The Biodesign Institute Center for Environmental Health Engineering, Arizona State University, 1001 S. McAllister Ave, AZ 85287-8101, USA; OneWaterOneHealth, The Arizona State University Foundation, The Biodesign Institute, Arizona State University, 1001 S. McAllister Ave, Tempe, AZ 85281, USA
| | - Erin M Driver
- The Biodesign Institute Center for Environmental Health Engineering, Arizona State University, 1001 S. McAllister Ave, AZ 85287-8101, USA
| | - Devin A Bowes
- The Biodesign Institute Center for Environmental Health Engineering, Arizona State University, 1001 S. McAllister Ave, AZ 85287-8101, USA; OneWaterOneHealth, The Arizona State University Foundation, The Biodesign Institute, Arizona State University, 1001 S. McAllister Ave, Tempe, AZ 85281, USA; School for Engineering of Matter, Transport, and Energy, Arizona State University, 1001 S. McAllister Ave, AZ 85287-8101, USA
| | - Bridger Johnston
- The Biodesign Institute Center for Environmental Health Engineering, Arizona State University, 1001 S. McAllister Ave, AZ 85287-8101, USA
| | - Rolf U Halden
- The Biodesign Institute Center for Environmental Health Engineering, Arizona State University, 1001 S. McAllister Ave, AZ 85287-8101, USA; School for Engineering of Matter, Transport, and Energy, Arizona State University, 1001 S. McAllister Ave, AZ 85287-8101, USA; School for Sustainable Engineering and the Built Environment, Arizona State University, 1001 S. McAllister Ave, AZ 85287-8101, USA; Global Futures Laboratory, Arizona State University, 800 S. Cady Mall, Tempe, AZ 85281, USA.
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23
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A hybrid stochastic model and its Bayesian identification for infectious disease screening in a university campus with application to massive COVID-19 screening at the University of Liège. Math Biosci 2022; 347:108805. [PMID: 35306009 PMCID: PMC8925303 DOI: 10.1016/j.mbs.2022.108805] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/06/2021] [Revised: 02/25/2022] [Accepted: 03/02/2022] [Indexed: 12/16/2022]
Abstract
Amid the COVID-19 pandemic, universities are implementing various prevention and mitigation measures. Identifying and isolating infectious individuals by using screening testing is one such a measure that can contribute to reducing spread. Here, we propose a hybrid stochastic model for infectious disease transmission in a university campus with screening testing and its surrounding community. Based on a compartmental modeling strategy, this hybrid stochastic model represents the evolution of the infectious disease and its transmission using continuous-time stochastic dynamics, and it represents the screening testing as discrete stochastic events. We also develop, in a Bayesian framework, the identification of parameters of this hybrid stochastic model, including transmission rates. These parameters were identified from the screening test data for the university population and observed incidence counts for the surrounding community. We implement the exploration of the Bayesian posterior using a machine-learning simulation-based inference approach. The proposed methodology was applied in a retrospective modeling study of a massive COVID-19 screening conducted at the University of Liège in Fall 2020. The emphasis of the paper is on the development of the hybrid stochastic model to assess the impact of screening testing as a measure to reduce spread. The hybrid stochastic model allows various factors to be represented and examined, such as interplay with the surrounding community, variability of the transmission dynamics, the rate of participation in the screening testing, the test sensitivity, the test frequency, the diagnosis delay, and compliance with isolation. The application in the retrospective modeling study suggests that a high rate of participation and a high test frequency are important factors to reduce spread.
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24
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Hu L, Wang S, Zheng T, Hu Z, Kang Y, Nie LF, Teng Z. The Effects of Migration and Limited Medical Resources of the Transmission of SARS-CoV-2 Model with Two Patches. Bull Math Biol 2022; 84:55. [PMID: 35377056 PMCID: PMC8977189 DOI: 10.1007/s11538-022-01010-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/23/2021] [Accepted: 02/27/2022] [Indexed: 11/26/2022]
Abstract
The sudden outbreak of SARS-CoV-2 has caused the shortage of medical resources around the world, especially in developing countries and underdeveloped regions. With the continuous increase in the duration of this disease, the control of migration of humans between regions or countries has to be relaxed. Based on this, we propose a two-patches mathematical model to simulate the transmission of SARS-CoV-2 among two-patches, asymptomatic infected humans and symptomatic infected humans, where a half-saturated detection rate function is also introduced to describe the effect of medical resources. By applying the methods of linearization and constructing a suitable Lyapunov function, the local and global stability of the disease-free equilibrium of this model without migration is obtained. Further, the existence of forward/backward bifurcation is analyzed, which is caused by the limited medical resources. This means that the elimination or prevalence of the disease no longer depends on the basic reproduction number but is closely related to the initial state of asymptomatic and symptomatic infected humans and the supply of medical resources. Finally, the global dynamics of the full model are discussed, and some numerical simulations are carried to explain the main results and the effects of migration and supply of medical resources on the transmission of disease.
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Affiliation(s)
- Lin Hu
- College of Mathematics and System Science, Xinjiang University, Urumqi, 830046, People's Republic of China.
| | - Shengfu Wang
- College of Mathematics and System Science, Xinjiang University, Urumqi, 830046, People's Republic of China
| | - Tingting Zheng
- College of Mathematics and System Science, Xinjiang University, Urumqi, 830046, People's Republic of China
| | - Zhenxiang Hu
- College of Mathematics and System Science, Xinjiang University, Urumqi, 830046, People's Republic of China
| | - Yuenan Kang
- College of Mathematics and System Science, Xinjiang University, Urumqi, 830046, People's Republic of China
| | - Lin-Fei Nie
- College of Mathematics and System Science, Xinjiang University, Urumqi, 830046, People's Republic of China.
| | - Zhidong Teng
- College of Mathematics and System Science, Xinjiang University, Urumqi, 830046, People's Republic of China.
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25
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Yang Q, Gruenbacher DM, Scoglio CM. Estimating data-driven coronavirus disease 2019 mitigation strategies for safe university reopening. J R Soc Interface 2022; 19:20210920. [PMID: 35285285 PMCID: PMC8919707 DOI: 10.1098/rsif.2021.0920] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/09/2021] [Accepted: 02/18/2022] [Indexed: 12/19/2022] Open
Abstract
After one pandemic year of remote or hybrid instructional modes, universities struggled with plans for an in-person autumn (fall) semester in 2021. To help inform university reopening policies, we collected survey data on social contact patterns and developed an agent-based model to simulate the spread of severe acute respiratory syndrome coronavirus 2 in university settings. Considering a reproduction number of R0 = 3 and 70% immunization effectiveness, we estimated that at least 80% of the university population immunized through natural infection or vaccination is needed for safe university reopening with relaxed non-pharmaceutical interventions (NPIs). By contrast, at least 60% of the university population immunized through natural infection or vaccination is needed for safe university reopening when NPIs are adopted. Nevertheless, attention needs to be paid to large-gathering events that could lead to infection size spikes. At an immunization coverage of 70%, continuing NPIs, such as wearing masks, could lead to a 78.39% reduction in the maximum cumulative infections and a 67.59% reduction in the median cumulative infections. However, even though this reduction is very beneficial, there is still a possibility of non-negligible size outbreaks because the maximum cumulative infection size is equal to 1.61% of the population, which is substantial.
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Affiliation(s)
- Qihui Yang
- Department of Electrical and Computer Engineering, Kansas State University, Manhattan, KS 66506, USA
| | - Don M. Gruenbacher
- Department of Electrical and Computer Engineering, Kansas State University, Manhattan, KS 66506, USA
| | - Caterina M. Scoglio
- Department of Electrical and Computer Engineering, Kansas State University, Manhattan, KS 66506, USA
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26
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Bartolucci A, Templeton A, Bernardini G. How distant? An experimental analysis of students' COVID-19 exposure and physical distancing in university buildings. INTERNATIONAL JOURNAL OF DISASTER RISK REDUCTION : IJDRR 2022; 70:102752. [PMID: 34976714 PMCID: PMC8714244 DOI: 10.1016/j.ijdrr.2021.102752] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/21/2021] [Revised: 10/31/2021] [Accepted: 12/23/2021] [Indexed: 05/06/2023]
Abstract
Closed university buildings proved to be one of the main hot spots for virus transmission during pandemics. As shown during the COVID-19 pandemic, physical distancing is one of the most effective measures to limit such transmission. As universities prepare to manage in-class activities, students' adherence to physical distancing requirements is a priority topic. Unfortunately, while physical distancing in classrooms can be easily managed, the movement of students inside common spaces can pose high risk of close proximity. This paper provides an experimental analysis of unidirectional student movement inside a case-study university building to investigate how physical distancing requirements impact student movement and grouping behaviour. Results show general adherence with the minimum required physical distancing guidance, but spaces such as corridors pose higher risk of exposure than doorways. Doorway width, in combination with group behaviour, affect the students' capacity to keep the recommended physical distance. Furthermore, questionnaire results show that students report higher perceived vulnerability while moving along corridors. Evidence-based results can support decision-makers in understanding individuals' exposure to COVID-19 in universities and researchers in developing behavioural models in preparation of future outbreaks and pandemics.
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Affiliation(s)
- A Bartolucci
- Institute of Security and Global Affairs (ISGA), Leiden University, The Hague, the Netherlands
| | - A Templeton
- Department of Psychology, The University of Edinburgh, Edinburgh, Scotland, United Kingdom
| | - G Bernardini
- Department of Construction, Civil Engineering and Architecture (DICEA), Università Politecnica delle Marche, Ancona, Italy
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Lehnig CL, Oren E, Vaidya NK. Effectiveness of alternative semester break schedules on reducing COVID-19 incidence on college campuses. Sci Rep 2022; 12:2116. [PMID: 35136172 PMCID: PMC8825861 DOI: 10.1038/s41598-022-06260-1] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/08/2021] [Accepted: 01/20/2022] [Indexed: 12/11/2022] Open
Abstract
Despite COVID-19 vaccination programs, the threat of new SARS-CoV-2 strains and continuing pockets of transmission persists. While many U.S. universities replaced their traditional nine-day spring 2021 break with multiple breaks of shorter duration, the effects these schedules have on reducing COVID-19 incidence remains unclear. The main objective of this study is to quantify the impact of alternative break schedules on cumulative COVID-19 incidence on university campuses. Using student mobility data and Monte Carlo simulations of returning infectious student size, we developed a compartmental susceptible-exposed-infectious-asymptomatic-recovered (SEIAR) model to simulate transmission dynamics among university students. As a case study, four alternative spring break schedules were derived from a sample of universities and evaluated. Across alternative multi-break schedules, the median percent reduction of total semester COVID-19 incidence, relative to a traditional nine-day break, ranged from 2 to 4% (for 2% travel destination prevalence) and 8-16% (for 10% travel destination prevalence). The maximum percent reduction from an alternate break schedule was estimated to be 37.6%. Simulation results show that adjusting academic calendars to limit student travel can reduce disease burden. Insights gleaned from our simulations could inform policies regarding appropriate planning of schedules for upcoming semesters upon returning to in-person teaching modalities.
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Affiliation(s)
- Chris L Lehnig
- Computational Science Research Center, San Diego State University, San Diego, USA
| | - Eyal Oren
- Division of Epidemiology and Biostatistics, School of Public Health, San Diego State University, San Diego, USA
| | - Naveen K Vaidya
- Computational Science Research Center, San Diego State University, San Diego, USA.
- Department of Mathematics and Statistics, San Diego State University, San Diego, USA.
- Viral Information Institute, San Diego State University, San Diego, USA.
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Page A, Diallo SY, Wildman WJ, Hodulik G, Weisel EW, Gondal N, Voas D. Computational Simulation Is a Vital Resource for Navigating the COVID-19 Pandemic. Simul Healthc 2022; 17:e141-e148. [PMID: 34009904 PMCID: PMC8808766 DOI: 10.1097/sih.0000000000000572] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
Abstract
INTRODUCTION COVID-19 has prompted the extensive use of computational models to understand the trajectory of the pandemic. This article surveys the kinds of dynamic simulation models that have been used as decision support tools and to forecast the potential impacts of nonpharmaceutical interventions (NPIs). We developed the Values in Viral Dispersion model, which emphasizes the role of human factors and social networks in viral spread and presents scenarios to guide policy responses. METHODS An agent-based model of COVID-19 was developed with individual agents able to move between 3 states (susceptible, infectious, or recovered), with each agent placed in 1 of 7 social network types and assigned a propensity to comply with NPIs (quarantine, contact tracing, and physical distancing). A series of policy questions were tested to illustrate the impact of social networks and NPI compliance on viral spread among (1) populations, (2) specific at-risk subgroups, and (3) individual trajectories. RESULTS Simulation outcomes showed large impacts of physical distancing policies on number of infections, with substantial modification by type of social network and level of compliance. In addition, outcomes on metrics that sought to maximize those never infected (or recovered) and minimize infections and deaths showed significantly different epidemic trajectories by social network type and among higher or lower at-risk age cohorts. CONCLUSIONS Although dynamic simulation models have important limitations, which are discussed, these decision support tools should be a key resource for navigating the ongoing impacts of the COVID-19 pandemic and can help local and national decision makers determine where, when, and how to invest resources.
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Morgan ML, Zetzer H. Latinx Undergraduates’ Navigation in the Context of COVID 19 and Racial Injustice. COUNSELING PSYCHOLOGIST 2022. [DOI: 10.1177/00110000211072199] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Six self-identified, first generation, Latinx, undergraduates from west coast public institutions were recruited via social media to participate in individual, semi-structured, qualitative interviews about their experiences with COVID-19 and racial injustice during the summer and fall of 2020. Interviews explored challenges and meaning-making around what had been happening in their lives and how they experienced and made sense of those events. Interpretative Phenomenological Analysis (IPA; Smith et al., 2009) was used to identify emergent themes that fell into two main categories: a) Adversities and b) Ways of Overcoming. Several subthemes also emerged in each category and will be discussed. Emergent themes indicated various ways of facing the adversities, including reliance on family and friends and highlighting the need for further resources for these students during this time. Limitations and future directions, as well as implications for counseling psychology researchers, educators, and practitioners are discussed.
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Affiliation(s)
- Melissa L. Morgan
- Counseling, Clinical and School PsychologyUniversity of California Santa Barbara
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Frazier PI, Cashore JM, Duan N, Henderson SG, Janmohamed A, Liu B, Shmoys DB, Wan J, Zhang Y. Modeling for COVID-19 college reopening decisions: Cornell, a case study. Proc Natl Acad Sci U S A 2022; 119:e2112532119. [PMID: 34969678 PMCID: PMC8764692 DOI: 10.1073/pnas.2112532119] [Citation(s) in RCA: 20] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022] Open
Abstract
We consider epidemiological modeling for the design of COVID-19 interventions in university populations, which have seen significant outbreaks during the pandemic. A central challenge is sensitivity of predictions to input parameters coupled with uncertainty about these parameters. Nearly 2 y into the pandemic, parameter uncertainty remains because of changes in vaccination efficacy, viral variants, and mask mandates, and because universities' unique characteristics hinder translation from the general population: a high fraction of young people, who have higher rates of asymptomatic infection and social contact, as well as an enhanced ability to implement behavioral and testing interventions. We describe an epidemiological model that formed the basis for Cornell University's decision to reopen for in-person instruction in fall 2020 and supported the design of an asymptomatic screening program instituted concurrently to prevent viral spread. We demonstrate how the structure of these decisions allowed risk to be minimized despite parameter uncertainty leading to an inability to make accurate point estimates and how this generalizes to other university settings. We find that once-per-week asymptomatic screening of vaccinated undergraduate students provides substantial value against the Delta variant, even if all students are vaccinated, and that more targeted testing of the most social vaccinated students provides further value.
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Affiliation(s)
- Peter I Frazier
- School of Operations Research & Information Engineering, Cornell University, Ithaca, NY 14850;
| | - J Massey Cashore
- School of Operations Research & Information Engineering, Cornell University, Ithaca, NY 14850
| | - Ning Duan
- School of Operations Research & Information Engineering, Cornell University, Ithaca, NY 14850
| | - Shane G Henderson
- School of Operations Research & Information Engineering, Cornell University, Ithaca, NY 14850
| | - Alyf Janmohamed
- School of Operations Research & Information Engineering, Cornell University, Ithaca, NY 14850
| | - Brian Liu
- School of Operations Research & Information Engineering, Cornell University, Ithaca, NY 14850
| | - David B Shmoys
- School of Operations Research & Information Engineering, Cornell University, Ithaca, NY 14850
| | - Jiayue Wan
- School of Operations Research & Information Engineering, Cornell University, Ithaca, NY 14850
| | - Yujia Zhang
- Center for Applied Mathematics, Cornell University, Ithaca, NY 14850
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Hambridge HL, Kahn R, Onnela JP. Examining SARS-CoV-2 Interventions in Residential Colleges Using an Empirical Network. Int J Infect Dis 2021; 113:325-330. [PMID: 34624516 PMCID: PMC8492892 DOI: 10.1016/j.ijid.2021.10.008] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/03/2021] [Revised: 09/17/2021] [Accepted: 10/02/2021] [Indexed: 01/11/2023] Open
Abstract
Objectives Universities have turned to SARS-CoV-2 models to examine campus reopening strategies. While these studies have explored a variety of modeling techniques, none have used empirical data. Methods In this study, we use an empirical proximity network of college freshmen obtained using smartphone Bluetooth to simulate the spread of the virus. We investigate the role of immunization, testing, isolation, mask wearing, and social distancing in the presence of implementation challenges and imperfect compliance. Results We show that frequent testing could drastically reduce the spread of the virus if levels of immunity are low, but its effects are limited if immunity is more ubiquitous. Furthermore, moderate levels of mask wearing and social distancing could lead to additional reductions in cumulative incidence, but their benefit decreases rapidly as immunity and testing frequency increase. However, if immunity from vaccination is imperfect or declines over time, scenarios not studied here, frequent testing and other interventions may play more central roles. Conclusions Our findings suggest that although regular testing and isolation are powerful tools, they have limited benefit if immunity is high or other interventions are widely adopted. If universities can attain even moderate levels of vaccination, masking, and social distancing, they may be able to relax the frequency of testing to once every four weeks.
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Affiliation(s)
- Hali L Hambridge
- Department of Biostatistics, Harvard T.H. Chan School of Public Health, Boston, MA, United States.
| | - Rebecca Kahn
- Center for Communicable Disease Dynamics, Harvard T.H. Chan School of Public Health, Boston, MA, United States.
| | - Jukka-Pekka Onnela
- Department of Biostatistics, Harvard T.H. Chan School of Public Health, Boston, MA, United States.
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Brennan RW, Nelson N, Paul R. Estimating the effect of timetabling decisions on the spread of SARS-CoV-2 in medium-to-large engineering schools in Canada: an agent-based modelling study. CMAJ Open 2021; 9:E1252-E1259. [PMID: 34933883 PMCID: PMC8695572 DOI: 10.9778/cmajo.20200280] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/22/2022] Open
Abstract
BACKGROUND During the COVID-19 pandemic, universities transitioned to primarily online delivery, and it is important to understand what implications the transition back to in-person activities may have on spread of SARS-CoV-2 in the student population. The specific aim of our study was to provide insights into the effect of timetabling decisions on the spread of SARS-CoV-2 in a population of undergraduate engineering students. METHODS We developed an agent-based modelling simulation that used a Canadian first-year undergraduate engineering program with an enrolment of 180 students in 5 courses of 12.7 weeks in length. Each course involved 150 minutes of lectures and 110 minutes of tutorials or laboratories per week. We considered several online and in-person timetabling scenarios with different scheduling frequencies and section sizes, in combination with surveillance and testing interventions. The study was conducted from May 1 to Aug. 31, 2021. RESULTS When timetabling interventions were applied, we found a reduction in the mean number of students who were infected and that a containment of widespread outbreaks could be achieved. Timetables with online lectures and small (1/6 class capacity) tutorial or laboratory sections reduced the mean number of students who were infected by 83% and reduced the risk of large outbreaks that occurred with in-person lectures. We also found that spread of SARS-CoV-2 was less sensitive to class size than to contact frequency when a biweekly timetable was implemented (i.e., alternating online and in-person sections on a biweekly basis). Including a contact-tracing policy and randomized testing to the timetabling interventions helped to contain the spread of SARS-CoV-2 further. Vaccination coverage had the largest effect on reducing the number of students who were infected. INTERPRETATION Our modelling showed that by taking advantage of timetabling opportunities and applying appropriate interventions (contact tracing, randomized testing and vaccination), SARS-CoV-2 infections may be averted and disruptions (case isolations) reduced. However, given the emergence of SARS-CoV-2 variants, transitions from online to in-person classes should proceed cautiously from small biweekly classes, for example, to manage risk.
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Affiliation(s)
- Robert W Brennan
- Department of Mechanical and Manufacturing Engineering (Brennan, Paul), University of Calgary, Calgary, Alta.; Department of Engineering and Information Technology (Nelson), Conestoga University, Cambridge, Ont.
| | - Nancy Nelson
- Department of Mechanical and Manufacturing Engineering (Brennan, Paul), University of Calgary, Calgary, Alta.; Department of Engineering and Information Technology (Nelson), Conestoga University, Cambridge, Ont
| | - Robyn Paul
- Department of Mechanical and Manufacturing Engineering (Brennan, Paul), University of Calgary, Calgary, Alta.; Department of Engineering and Information Technology (Nelson), Conestoga University, Cambridge, Ont
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Relationship between teaching modality and COVID-19, well-being, and teaching satisfaction (campus & corona): A cohort study among students in higher education. PUBLIC HEALTH IN PRACTICE 2021; 2:100187. [PMID: 34467258 PMCID: PMC8390097 DOI: 10.1016/j.puhip.2021.100187] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/19/2021] [Revised: 07/01/2021] [Accepted: 08/08/2021] [Indexed: 11/22/2022] Open
Abstract
Objectives Higher education institutions all over the world struggled to balance the need for infection control and educational requirements, as they prepared to reopen after the first wave of the COVID-19 pandemic. A particularly difficult choice was whether to offer for in-person or online teaching. Norwegian universities and university colleges opted for a hybrid model when they reopened for the autumn semester, with some students being offered more in-person teaching than others. We seized this opportunity to study the association between different teaching modalities and COVID-19 risk, quality of life (subjective well-being), and teaching satisfaction. Study design Prospective, observational cohort study. Methods We recruited students in higher education institutions in Norway who we surveyed biweekly from September to December in 2020. Results 26 754 students from 14 higher education institutions provided data to our analyses. We found that two weeks of in-person teaching was negatively associated with COVID-19 risk compared to online teaching, but the difference was very uncertain (−22% relative difference; 95% CI -77%–33%). Quality of life was positively associated with in-person teaching (3%; 95% CI 2%–4%), as was teaching satisfaction (10%; 95% CI 8%–11%). Conclusion The association between COVID-19 infection and teaching modality was highly uncertain. Shifting from in-person to online teaching seems to have a negative impact on the well-being of students in higher education.
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Hill EM, Atkins BD, Keeling MJ, Tildesley MJ, Dyson L. Modelling SARS-CoV-2 transmission in a UK university setting. Epidemics 2021; 36:100476. [PMID: 34224948 PMCID: PMC7611483 DOI: 10.1016/j.epidem.2021.100476] [Citation(s) in RCA: 17] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/09/2020] [Revised: 03/15/2021] [Accepted: 06/15/2021] [Indexed: 01/12/2023] Open
Abstract
Around 40% of school leavers in the UK attend university and individual universities generally host thousands of students each academic year. Bringing together these student communities during the COVID-19 pandemic may require strong interventions to control transmission. Prior modelling analyses of SARS-CoV-2 transmission within universities using compartmental modelling approaches suggest that outbreaks are almost inevitable. We constructed a network-based model to capture the interactions of a student population in different settings (housing, social and study). For a single academic term of a representative campus-based university, we ran a susceptible-latent-infectious-recovered type epidemic process, parameterised according to available estimates for SARS-CoV-2. We investigated the impact of: adherence to (or effectiveness of) isolation and test and trace measures; room isolation of symptomatic students; and supplementary mass testing. With all adhering to test, trace and isolation measures, we found that 22% (7%-41%) of the student population could be infected during the autumn term, compared to 69% (56%-76%) when assuming zero adherence to such measures. Irrespective of the adherence to isolation measures, on average a higher proportion of students resident on-campus became infected compared to students resident off-campus. Room isolation generated minimal benefits. Regular mass testing, together with high adherence to isolation and test and trace measures, could substantially reduce the proportion infected during the term compared to having no testing. Our findings suggest SARS-CoV-2 may readily transmit in a university setting if there is limited adherence to nonpharmaceutical interventions and/or there are delays in receiving test results. Following isolation guidance and effective contact tracing curbed transmission and reduced the expected time an adhering student would spend in isolation.
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Affiliation(s)
- Edward M Hill
- The Zeeman Institute for Systems Biology & Infectious Disease Epidemiology Research, School of Life Sciences and Mathematics Institute, University of Warwick, Coventry, CV4 7 AL, United Kingdom; Joint UNIversities Pandemic and Epidemiological Research(1), United Kingdom.
| | - Benjamin D Atkins
- The Zeeman Institute for Systems Biology & Infectious Disease Epidemiology Research, School of Life Sciences and Mathematics Institute, University of Warwick, Coventry, CV4 7 AL, United Kingdom; Joint UNIversities Pandemic and Epidemiological Research(1), United Kingdom
| | - Matt J Keeling
- The Zeeman Institute for Systems Biology & Infectious Disease Epidemiology Research, School of Life Sciences and Mathematics Institute, University of Warwick, Coventry, CV4 7 AL, United Kingdom; Joint UNIversities Pandemic and Epidemiological Research(1), United Kingdom
| | - Michael J Tildesley
- The Zeeman Institute for Systems Biology & Infectious Disease Epidemiology Research, School of Life Sciences and Mathematics Institute, University of Warwick, Coventry, CV4 7 AL, United Kingdom; Joint UNIversities Pandemic and Epidemiological Research(1), United Kingdom
| | - Louise Dyson
- The Zeeman Institute for Systems Biology & Infectious Disease Epidemiology Research, School of Life Sciences and Mathematics Institute, University of Warwick, Coventry, CV4 7 AL, United Kingdom; Joint UNIversities Pandemic and Epidemiological Research(1), United Kingdom
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Bahl R, Eikmeier N, Fraser A, Junge M, Keesing F, Nakahata K, Reeves L. Modeling COVID-19 spread in small colleges. PLoS One 2021; 16:e0255654. [PMID: 34407115 PMCID: PMC8372956 DOI: 10.1371/journal.pone.0255654] [Citation(s) in RCA: 17] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/16/2020] [Accepted: 07/21/2021] [Indexed: 12/24/2022] Open
Abstract
We develop an agent-based model on a network meant to capture features unique to COVID-19 spread through a small residential college. We find that a safe reopening requires strong policy from administrators combined with cautious behavior from students. Strong policy includes weekly screening tests with quick turnaround and halving the campus population. Cautious behavior from students means wearing facemasks, socializing less, and showing up for COVID-19 testing. We also find that comprehensive testing and facemasks are the most effective single interventions, building closures can lead to infection spikes in other areas depending on student behavior, and faster return of test results significantly reduces total infections.
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Affiliation(s)
- Riti Bahl
- Mathematics, Bard College, Annandale-on-Hudson, NY, United States of America
| | - Nicole Eikmeier
- Computer Science, Grinnell College, Grinnell, IA, United States of America
| | | | - Matthew Junge
- Mathematics, Baruch College, New York, NY, United States of America
| | - Felicia Keesing
- Biology, Bard College, Annandale-on-Hudson, NY, United States of America
| | - Kukai Nakahata
- Mathematics, Baruch College, New York, NY, United States of America
| | - Lily Reeves
- Applied Mathematics, Cornell University, Ithaca, NY, United States of America
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Muller K, Muller PA. Mathematical modelling of the spread of COVID-19 on a university campus. Infect Dis Model 2021; 6:1025-1045. [PMID: 34414342 PMCID: PMC8364150 DOI: 10.1016/j.idm.2021.08.004] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/20/2021] [Revised: 07/29/2021] [Accepted: 08/08/2021] [Indexed: 01/05/2023] Open
Abstract
In this paper we present a deterministic transmission dynamic compartmental model for the spread of the novel coronavirus on a college campus for the purpose of analyzing strategies to mitigate an outbreak. The goal of this project is to determine and compare the utility of certain containment strategies including gateway testing, surveillance testing, and contact tracing as well as individual level control measures such as mask wearing and social distancing. We modify a standard SEIR-type model to reflect what is currently known about COVID-19. We also modify the model to reflect the population present on a college campus, separating it into students and faculty. This is done in order to capture the expected different contact rates between groups as well as the expected difference in outcomes based on age known for COVID-19. We aim to provide insight into which strategies are most effective, rather than predict exact numbers of infections. We analyze effectiveness by looking at relative changes in the total number of cases as well as the effect a measure has on the estimated basic reproductive number. We find that the total number of infections is most sensitive to parameters relating to student behaviors. We also find that contact tracing can be an effective control strategy when surveillance testing is unavailable. Lastly, we validate the model using data from Villanova University's online COVID-19 Dashboard from Fall 2020 and find good agreement between model and data when superspreader events are incorporated in the model as shocks to the number of infected individuals approximately two weeks after each superspreader event.
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Affiliation(s)
- Kaitlyn Muller
- 800 E. Lancaster Avenue, Department of Mathematics and Statistics, Villanova University, Villanova, PA, USA
| | - Peter A. Muller
- 800 E. Lancaster Avenue, Department of Mathematics and Statistics, Villanova University, Villanova, PA, USA
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Poole SF, Gronsbell J, Winter D, Nickels S, Levy R, Fu B, Burq M, Saeb S, Edwards MD, Behr MK, Kumaresan V, Macalalad AR, Shah S, Prevost M, Snoad N, Brenner MP, Myers LJ, Varghese P, Califf RM, Washington V, Lee VS, Fromer M. A holistic approach for suppression of COVID-19 spread in workplaces and universities. PLoS One 2021; 16:e0254798. [PMID: 34383766 PMCID: PMC8360595 DOI: 10.1371/journal.pone.0254798] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/24/2020] [Accepted: 07/02/2021] [Indexed: 12/05/2022] Open
Abstract
As society has moved past the initial phase of the COVID-19 crisis that relied on broad-spectrum shutdowns as a stopgap method, industries and institutions have faced the daunting question of how to return to a stabilized state of activities and more fully reopen the economy. A core problem is how to return people to their workplaces and educational institutions in a manner that is safe, ethical, grounded in science, and takes into account the unique factors and needs of each organization and community. In this paper, we introduce an epidemiological model (the "Community-Workplace" model) that accounts for SARS-CoV-2 transmission within the workplace, within the surrounding community, and between them. We use this multi-group deterministic compartmental model to consider various testing strategies that, together with symptom screening, exposure tracking, and nonpharmaceutical interventions (NPI) such as mask wearing and physical distancing, aim to reduce disease spread in the workplace. Our framework is designed to be adaptable to a variety of specific workplace environments to support planning efforts as reopenings continue. Using this model, we consider a number of case studies, including an office workplace, a factory floor, and a university campus. Analysis of these cases illustrates that continuous testing can help a workplace avoid an outbreak by reducing undetected infectiousness even in high-contact environments. We find that a university setting, where individuals spend more time on campus and have a higher contact load, requires more testing to remain safe, compared to a factory or office setting. Under the modeling assumptions, we find that maintaining a prevalence below 3% can be achieved in an office setting by testing its workforce every two weeks, whereas achieving this same goal for a university could require as much as fourfold more testing (i.e., testing the entire campus population twice a week). Our model also simulates the dynamics of reduced spread that result from the introduction of mitigation measures when test results reveal the early stages of a workplace outbreak. We use this to show that a vigilant university that has the ability to quickly react to outbreaks can be justified in implementing testing at the same rate as a lower-risk office workplace. Finally, we quantify the devastating impact that an outbreak in a small-town college could have on the surrounding community, which supports the notion that communities can be better protected by supporting their local places of business in preventing onsite spread of disease.
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Affiliation(s)
- Sarah F. Poole
- Verily Life Sciences, South San Francisco, CA, United States of America
| | - Jessica Gronsbell
- Verily Life Sciences, South San Francisco, CA, United States of America
| | - Dale Winter
- Verily Life Sciences, South San Francisco, CA, United States of America
| | - Stefanie Nickels
- Verily Life Sciences, South San Francisco, CA, United States of America
| | - Roie Levy
- Verily Life Sciences, South San Francisco, CA, United States of America
| | - Bin Fu
- Verily Life Sciences, South San Francisco, CA, United States of America
| | - Maximilien Burq
- Verily Life Sciences, South San Francisco, CA, United States of America
| | - Sohrab Saeb
- Verily Life Sciences, South San Francisco, CA, United States of America
| | | | - Michael K. Behr
- Verily Life Sciences, South San Francisco, CA, United States of America
| | - Vignesh Kumaresan
- Verily Life Sciences, South San Francisco, CA, United States of America
| | | | - Sneh Shah
- Verily Life Sciences, South San Francisco, CA, United States of America
| | - Michelle Prevost
- Verily Life Sciences, South San Francisco, CA, United States of America
| | - Nigel Snoad
- Verily Life Sciences, South San Francisco, CA, United States of America
| | | | - Lance J. Myers
- Verily Life Sciences, South San Francisco, CA, United States of America
| | - Paul Varghese
- Verily Life Sciences, South San Francisco, CA, United States of America
| | - Robert M. Califf
- Verily Life Sciences, South San Francisco, CA, United States of America
| | | | - Vivian S. Lee
- Verily Life Sciences, South San Francisco, CA, United States of America
| | - Menachem Fromer
- Verily Life Sciences, South San Francisco, CA, United States of America
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Zhao X, Tatapudi H, Corey G, Gopalappa C. Threshold analyses on combinations of testing, population size, and vaccine coverage for COVID-19 control in a university setting. PLoS One 2021; 16:e0255864. [PMID: 34370759 PMCID: PMC8351932 DOI: 10.1371/journal.pone.0255864] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/22/2020] [Accepted: 07/26/2021] [Indexed: 01/05/2023] Open
Abstract
We simulated epidemic projections of a potential COVID-19 outbreak in a residential university population in the United States under varying combinations of asymptomatic tests (5% to 33% per day), transmission rates (2.5% to 14%), and contact rates (1 to 25), to identify the contact rate threshold that, if exceeded, would lead to exponential growth in infections. Using this, we extracted contact rate thresholds among non-essential workers, population size thresholds in the absence of vaccines, and vaccine coverage thresholds. We further stream-lined our analyses to transmission rates of 5 to 8%, to correspond to the reported levels of face-mask-use/physical-distancing during the 2020 pandemic. Our results suggest that, in the absence of vaccines, testing alone without reducing population size would not be sufficient to control an outbreak. If the population size is lowered to 34% (or 44%) of the actual population size to maintain contact rates at 4 (or 7) among non-essential workers, mass tests at 25% (or 33%) per day would help control an outbreak. With the availability of vaccines, the campus can be kept at full population provided at least 95% are vaccinated. If vaccines are partially available such that the coverage is lower than 95%, keeping at full population would require asymptomatic testing, either mass tests at 25% per day if vaccine coverage is at 63-79%, or mass tests at 33% per day if vaccine coverage is at 53-68%. If vaccine coverage is below 53%, to control an outbreak, in addition to mass tests at 33% per day, it would also require lowering the population size to 90%, 75%, and 60%, if vaccine coverage is at 38-53%, 23-38%, and below 23%, respectively. Threshold estimates from this study, interpolated over the range of transmission rates, can collectively help inform campus level preparedness plans for adoption of face mask/physical-distancing, testing, remote instructions, and personnel scheduling, during non-availability or partial-availability of vaccines, in the event of SARS-Cov2-type disease outbreaks.
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Affiliation(s)
- Xinmeng Zhao
- Department of Mechanical and Industrial Engineering, University of Massachusetts Amherst, Amherst, MA, United States of America
| | - Hanisha Tatapudi
- Department of Mechanical and Industrial Engineering, University of Massachusetts Amherst, Amherst, MA, United States of America
| | - George Corey
- University Health Services, University of Massachusetts Amherst, Amherst, MA, United States of America
| | - Chaitra Gopalappa
- Department of Mechanical and Industrial Engineering, University of Massachusetts Amherst, Amherst, MA, United States of America
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Johnson SS, Jackson KC, Mietchen MS, Sbai S, Schwartz EJ, Lofgren ET. Excess Risk of COVID-19 to University Populations Resulting from In-Person Sporting Events. INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH 2021; 18:ijerph18168260. [PMID: 34444008 PMCID: PMC8394285 DOI: 10.3390/ijerph18168260] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/30/2021] [Revised: 07/27/2021] [Accepted: 07/28/2021] [Indexed: 12/19/2022]
Abstract
Background: One of the consequences of COVID-19 has been the cancelation of collegiate sporting events. We explore the impact of sports on COVID-19 transmission on a college campus. Methods: Using a compartmental model representing the university, we model the impact of influxes of 10,000 visitors attending events and ancillary activities (dining out, visiting family, shopping, etc.) on 20,000 students. We vary the extent visitors interact with the campus, the number of infectious visitors, and the extent to which the campus has controlled COVID-19 absent events. We also conduct a global sensitivity analysis. Results: Events caused an increase in the number of cases ranging from a 25% increase when the campus already had an uncontrolled COVID-19 outbreak and visitors had a low prevalence of COVID-19 and mixed lightly with the campus community to an 822% increase where the campus had controlled their COVID-19 outbreak and visitors had both a high prevalence of COVID-19 and mixed heavily with the campus community. The model was insensitive to parameter uncertainty, save for the duration a symptomatic individual was infectious. Conclusion: Sporting events represent a threat to the health of the campus community. This is the case even in circumstances where COVID-19 seems controlled both on-campus and among the general population.
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Affiliation(s)
- Stephanie S. Johnson
- Paul G. Allen School for Global Health, Washington State University, Pullman, WA 99164, USA; (S.S.J.); (K.C.J.); (M.S.M.)
| | - Katelin C. Jackson
- Paul G. Allen School for Global Health, Washington State University, Pullman, WA 99164, USA; (S.S.J.); (K.C.J.); (M.S.M.)
| | - Matthew S. Mietchen
- Paul G. Allen School for Global Health, Washington State University, Pullman, WA 99164, USA; (S.S.J.); (K.C.J.); (M.S.M.)
| | - Samir Sbai
- School of Electrical Engineering and Computer Science, Washington State University, Pullman, WA 99164, USA;
| | - Elissa J. Schwartz
- Department of Mathematics and Statistics, Washington State University, Pullman, WA 99164, USA;
- School of Biological Sciences, Washington State University, Pullman, WA 99164, USA
| | - Eric T. Lofgren
- Paul G. Allen School for Global Health, Washington State University, Pullman, WA 99164, USA; (S.S.J.); (K.C.J.); (M.S.M.)
- Correspondence:
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Gillam TB, Cole J, Gharbi K, Angiolini E, Barker T, Bickerton P, Brabbs T, Chin J, Coen E, Cossey S, Davey R, Davidson R, Durrant A, Edwards D, Hall N, Henderson S, Hitchcock M, Irish N, Lipscombe J, Jones G, Parr G, Rushworth S, Shearer N, Smith R, Steel N. Norwich COVID-19 testing initiative pilot: evaluating the feasibility of asymptomatic testing on a university campus. J Public Health (Oxf) 2021; 43:82-88. [PMID: 33124664 PMCID: PMC7665602 DOI: 10.1093/pubmed/fdaa194] [Citation(s) in RCA: 26] [Impact Index Per Article: 8.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/01/2020] [Revised: 10/01/2020] [Accepted: 10/07/2020] [Indexed: 11/13/2022] Open
Abstract
Background There is a high prevalence of COVID-19 in university-age students, who are returning to campuses. There is little evidence regarding the feasibility of universal, asymptomatic testing to help control outbreaks in this population. This study aimed to pilot mass COVID-19 testing on a university research park, to assess the feasibility and acceptability of scaling up testing to all staff and students. Methods This was a cross-sectional feasibility study on a university research park in the East of England. All staff and students (5625) were eligible to participate. All participants were offered four PCR swabs, which they self-administered over two weeks. Outcome measures included uptake, drop-out rate, positivity rates, participant acceptability measures, laboratory processing measures, data collection and management measures. Results 798 (76%) of 1053 who registered provided at least one swab; 687 (86%) provided all four; 792 (99%) of 798 who submitted at least one swab had all negative results and 6 participants had one inconclusive result. There were no positive results. 458 (57%) of 798 participants responded to a post-testing survey, demonstrating a mean acceptability score of 4.51/5, with five being the most positive. Conclusions Repeated self-testing for COVID-19 using PCR is feasible and acceptable to a university population.
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Affiliation(s)
- T Berger Gillam
- Faculty of Medicine and Health Sciences, University of East Anglia, Norwich NR4 7TJ, UK
| | - J Cole
- Faculty of Medicine and Health Sciences, University of East Anglia, Norwich NR4 7TJ, UK
| | - K Gharbi
- Genomics Pipelines, Earlham Institute, Norwich, NR4 7UZ, UK
| | - E Angiolini
- Scientific Training and Education, Earlham Institute, Norwich NR4 7UZ, UK
| | - T Barker
- Genomics Pipelines, Earlham Institute, Norwich, NR4 7UZ, UK
| | - P Bickerton
- Communications, Earlham Institute, Norwich NR4 7UZ, UK
| | - T Brabbs
- Genomics Pipelines, Earlham Institute, Norwich, NR4 7UZ, UK
| | - J Chin
- School of Computing Sciences, University of East Anglia, Norwich NR4 7TJ, UK
| | - E Coen
- John Innes Centre, Norwich NR4 7UH, UK
| | - S Cossey
- Earlham Institute, Norwich NR4 7UZ, UK
| | - R Davey
- Earlham Institute, Norwich NR4 7UZ, UK
| | - R Davidson
- Faculty of Medicine and Health Sciences, University of East Anglia, Norwich NR4 7TJ, UK
| | - A Durrant
- Genomics Pipelines, Earlham Institute, Norwich, NR4 7UZ, UK
| | - D Edwards
- Faculty of Medicine and Health Sciences, University of East Anglia, Norwich NR4 7TJ, UK
| | - N Hall
- Earlham Institute, Norwich NR4 7UZ, UK.,UEA Biosciences, University of East Anglia, Norwich NR4 7TJ, UK
| | - S Henderson
- Genomics Pipelines, Earlham Institute, Norwich, NR4 7UZ, UK
| | - M Hitchcock
- UEA Health and Social Care Partners, University of East Anglia, Norwich Research Park, Norwich NR4 7TJ, UK
| | - N Irish
- Genomics Pipelines, Earlham Institute, Norwich, NR4 7UZ, UK
| | - J Lipscombe
- Genomics Pipelines, Earlham Institute, Norwich, NR4 7UZ, UK
| | - G Jones
- Communications, Earlham Institute, Norwich NR4 7UZ, UK
| | - G Parr
- School of Computing Sciences, University of East Anglia, Norwich NR4 7TJ, UK
| | - S Rushworth
- Faculty of Medicine and Health Sciences, University of East Anglia, Norwich NR4 7TJ, UK
| | - N Shearer
- Genomics Pipelines, Earlham Institute, Norwich, NR4 7UZ, UK
| | - R Smith
- Faculty of Medicine and Health Sciences, University of East Anglia, Norwich NR4 7TJ, UK
| | - N Steel
- Faculty of Medicine and Health Sciences, University of East Anglia, Norwich NR4 7TJ, UK
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Hambridge HL, Kahn R, Onnela JP. Examining SARS-CoV-2 Interventions in Residential Colleges Using an Empirical Network. MEDRXIV : THE PREPRINT SERVER FOR HEALTH SCIENCES 2021:2021.03.09.21253198. [PMID: 33758870 PMCID: PMC7987029 DOI: 10.1101/2021.03.09.21253198] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
Abstract
Universities have turned to SARS-CoV-2 models to examine campus reopening strategies1-9. While these studies have explored a variety of modeling techniques, all have relied on simulated data. Here, we use an empirical proximity network of college freshmen10, ascertained using smartphone Bluetooth, to simulate the spread of the virus. We investigate the role of testing, isolation, mask wearing, and social distancing in the presence of implementation challenges and imperfect compliance. Here we show that while frequent testing can drastically reduce spread if mask wearing and social distancing are not widely adopted, testing has limited impact if they are ubiquitous. Furthermore, even moderate levels of immunity can significantly reduce new infections, especially when combined with other interventions. Our findings suggest that while testing and isolation are powerful tools, they have limited benefit if other interventions are widely adopted. If universities can attain high levels of masking and social distancing, they may be able to relax testing frequency to once every two to four weeks.
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Affiliation(s)
- Hali L Hambridge
- Department of Biostatistics, Harvard T.H. Chan School of Public Health, Boston, MA
| | - Rebecca Kahn
- Center for Communicable Disease Dynamics, Harvard T.H. Chan School of Public Health, Boston, MA
| | - Jukka-Pekka Onnela
- Department of Biostatistics, Harvard T.H. Chan School of Public Health, Boston, MA
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Rennert L, McMahan C, Kalbaugh CA, Yang Y, Lumsden B, Dean D, Pekarek L, Colenda CC. Surveillance-based informative testing for detection and containment of SARS-CoV-2 outbreaks on a public university campus: an observational and modelling study. THE LANCET CHILD & ADOLESCENT HEALTH 2021; 5:428-436. [PMID: 33751952 PMCID: PMC7979144 DOI: 10.1016/s2352-4642(21)00060-2] [Citation(s) in RCA: 28] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/25/2021] [Revised: 02/22/2021] [Accepted: 02/23/2021] [Indexed: 01/12/2023]
Abstract
Background Despite severe outbreaks of COVID-19 among colleges and universities across the USA during the Fall 2020 semester, the majority of institutions did not routinely test students. While high-frequency repeated testing is considered the most effective strategy for disease mitigation, most institutions do not have the necessary infrastructure or funding for implementation. Therefore, alternative strategies for testing the student population are needed. Our study detailed the implementation and results of testing strategies to mitigate SARS-CoV-2 spread on a university campus, and we aimed to assess the relative effectiveness of the different testing strategies. Methods For this retrospective cohort study, we included 6273 on-campus students arriving to a large public university in the rural USA (Clemson, SC, USA) for in-person instruction in the Fall 2020 semester (Sept 21 to Nov 25). Individuals arriving after Sept 23, those who tested positive for SARS-CoV-2 before Aug 19, and student athletes and band members were not included in this study. We implemented two testing strategies to mitigate SARS-CoV-2 spread during this period: a novel surveillance-based informative testing (SBIT) strategy, consisting of random surveillance testing to identify outbreaks in residence hall buildings or floors and target them for follow-up testing (Sept 23 to Oct 5); followed by a repeated weekly surveillance testing (Oct 6 to Nov 22). Relative changes in estimated weekly prevalence were examined. We developed SARS-CoV-2 transmission models to compare the relative effectiveness of weekly testing (900 daily surveillance tests), SBIT (450 daily surveillance tests), random surveillance testing (450 daily surveillance tests), and voluntary testing (0 daily surveillance tests) on disease mitigation. Model parameters were based on our empirical surveillance data in conjunction with published sources. Findings SBIT was implemented from Sept 23 to Oct 5, and identified outbreaks in eight residence hall buildings and 45 residence hall floors. Targeted testing of residence halls was 2·03 times more likely to detect a positive case than random testing (95% CI 1·67–2·46). Weekly prevalence was reduced from a peak of 8·7% to 5·6% during this 2-week period, a relative reduction of 36% (95% CI 27–44). Prevalence continued to decrease after implementation of weekly testing, reaching 0·8% at the end of in-person instruction (week 9). SARS-CoV-2 transmission models concluded that, in the absence of SBIT (ie, voluntary testing only), the total number of COVID-19 cases would have increased by 154% throughout the semester. Compared with SBIT, random surveillance testing alone would have resulted in a 24% increase in COVID-19 cases. Implementation of weekly testing at the start of the semester would have resulted in 36% fewer COVID-19 cases throughout the semester compared with SBIT, but it would require twice the number of daily tests. Interpretation It is imperative that institutions rigorously test students during the 2021 academic year. When high-frequency testing (eg, weekly) is not possible, SBIT is an effective strategy to mitigate disease spread among the student population that can be feasibly implemented across colleges and universities. Funding Clemson University, USA.
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Affiliation(s)
- Lior Rennert
- Department of Public Health Sciences, Clemson University, Clemson, SC, USA.
| | - Christopher McMahan
- School of Mathematical and Statistical Sciences, Clemson University, Clemson, SC, USA
| | - Corey A Kalbaugh
- Department of Public Health Sciences, Clemson University, Clemson, SC, USA
| | - Yuan Yang
- School of Mathematical and Statistical Sciences, Clemson University, Clemson, SC, USA
| | - Brandon Lumsden
- School of Mathematical and Statistical Sciences, Clemson University, Clemson, SC, USA
| | - Delphine Dean
- Department of Bioengineering, Clemson University, Clemson, SC, USA
| | - Lesslie Pekarek
- Student Health Services, Clemson University, Clemson, SC, USA
| | - Christopher C Colenda
- West Virginia University Health System, West Virginia University, Morgantown, WV, USA
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Echoes down the corridor. Experiences and perspectives of library and information science education (LISE) during COVID-19 through an African lens. LIBRARY MANAGEMENT 2021. [DOI: 10.1108/lm-02-2021-0016] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
PurposeThe COVID-19 pandemic has resulted in enormous challenges, but also presented opportunities that have notable implications for the future. The aim of this paper is to explore and discuss the experiences, perspectives, challenges and opportunities of Library and Information Science Educators (LISE) during the pandemic. The aim is articulated in the following three research questions: How is the COVID-19 pandemic experienced by LISE and in research? What are the perceptions formed during the period? And what are the challenges and opportunities?Design/methodology/approachThis is an interpretivist qualitative study informed by disaster management theories. The study involved the content analysis of existing literature with a focus on COVID-19 and higher education, particularly LISE, in conjunction with an open-ended email questionnaire that was sent to selected LIS educators/faculty/staff from major LIS Schools from eight sub-Saharan African countries. The author used personal experiences and observation to supplement the data and the interpretation.FindingsResults show more similarities than differences in how the COVID-19 pandemic is experienced and perceived, as well as the challenges and opportunities that it brings to the sector. As a whole, political factors are most pronounced, meaning that administration and decision-making need more attention in the sector. Also notable is that opportunities are mostly linked to technological factors, which will determine the “new normal” for LISE in the future. Almost all the narratives focused on the middle level of (during) the disaster life cycle, which is understandable as the complete cycle of the disaster is yet to come, likely when COVID-19 ceases to be a threat.Research limitations/implicationsThe sample was small, as related studies focus more on COVID-19 and higher education, with hardly any focusing on LISE. The COVID-19 pandemic has not ended, so the disaster management life cycle cannot be fully exploited. Furthermore, the author’s categorization of responses within PEST was largely judgmental.Practical implicationsNew research, teaching and learning developmental paths have been created for LISE. The study provides practical reflection on the effects of COVID-19 on the sector and HEIs that can inform discourse and responses to the pandemic.Originality/valueThe study explores a new research domain in LISE and due to limited research in the domain brings together important voices/narratives – based on their experiences – of LIS educators in Africa on the research area. Further, it proposes the future of LISE under COVID-19 within the 4IR framework.
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Lopman B, Liu CY, Le Guillou A, Handel A, Lash TL, Isakov AP, Jenness SM. A modeling study to inform screening and testing interventions for the control of SARS-CoV-2 on university campuses. Sci Rep 2021; 11:5900. [PMID: 33723312 PMCID: PMC7960702 DOI: 10.1038/s41598-021-85252-z] [Citation(s) in RCA: 17] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/03/2020] [Accepted: 02/22/2021] [Indexed: 12/16/2022] Open
Abstract
University administrators face decisions about how to safely return and maintain students, staff and faculty on campus throughout the 2020-21 school year. We developed a susceptible-exposed-infectious-recovered (SEIR) deterministic compartmental transmission model of SARS-CoV-2 among university students, staff, and faculty. Our goals were to inform planning at our own university, Emory University, a medium-sized university with around 15,000 students and 15,000 faculty and staff, and to provide a flexible modeling framework to inform the planning efforts at similar academic institutions. Control strategies of isolation and quarantine are initiated by screening (regardless of symptoms) or testing (of symptomatic individuals). We explored a range of screening and testing frequencies and performed a probabilistic sensitivity analysis. We found that among students, monthly and weekly screening can reduce cumulative incidence by 59% and 87%, respectively, while testing with a 2-, 4- and 7-day delay between onset of infectiousness and testing results in an 84%, 74% and 55% reduction in cumulative incidence. Smaller reductions were observed among staff and faculty. Community-introduction of SARS-CoV-2 onto campus may be controlled with testing, isolation, contract tracing and quarantine. Screening would need to be performed at least weekly to have substantial reductions beyond disease surveillance. This model can also inform resource requirements of diagnostic capacity and isolation/quarantine facilities associated with different strategies.
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Affiliation(s)
- Ben Lopman
- Department of Epidemiology, Rollins School of Public Health, Emory University, Atlanta, GA, 30322, USA
| | - Carol Y Liu
- Department of Epidemiology, Rollins School of Public Health, Emory University, Atlanta, GA, 30322, USA.
| | - Adrien Le Guillou
- Department of Epidemiology, Rollins School of Public Health, Emory University, Atlanta, GA, 30322, USA
- Department of Research and Public Health, Reims Teaching Hospitals, Robert Debré Hospital, Reims, France
| | - Andreas Handel
- College of Public Health, University of Georgia, Athens, GA, 30602, USA
| | - Timothy L Lash
- Department of Epidemiology, Rollins School of Public Health, Emory University, Atlanta, GA, 30322, USA
| | | | - Samuel M Jenness
- Department of Epidemiology, Rollins School of Public Health, Emory University, Atlanta, GA, 30322, USA
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Truszkowska A, Behring B, Hasanyan J, Zino L, Butail S, Caroppo E, Jiang Z, Rizzo A, Porfiri M. High-Resolution Agent-Based Modeling of COVID-19 Spreading in a Small Town. ADVANCED THEORY AND SIMULATIONS 2021; 4:2000277. [PMID: 33786413 PMCID: PMC7995144 DOI: 10.1002/adts.202000277] [Citation(s) in RCA: 26] [Impact Index Per Article: 8.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/03/2020] [Revised: 12/23/2020] [Indexed: 12/18/2022]
Abstract
Amid the ongoing COVID-19 pandemic, public health authorities and the general population are striving to achieve a balance between safety and normalcy. Ever changing conditions call for the development of theory and simulation tools to finely describe multiple strata of society while supporting the evaluation of "what-if" scenarios. Particularly important is to assess the effectiveness of potential testing approaches and vaccination strategies. Here, an agent-based modeling platform is proposed to simulate the spreading of COVID-19 in small towns and cities, with a single-individual resolution. The platform is validated on real data from New Rochelle, NY-one of the first outbreaks registered in the United States. Supported by expert knowledge and informed by reported data, the model incorporates detailed elements of the spreading within a statistically realistic population. Along with pertinent functionality such as testing, treatment, and vaccination options, the model accounts for the burden of other illnesses with symptoms similar to COVID-19. Unique to the model is the possibility to explore different testing approaches-in hospitals or drive-through facilities-and vaccination strategies that could prioritize vulnerable groups. Decision-making by public authorities could benefit from the model, for its fine-grain resolution, open-source nature, and wide range of features.
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Affiliation(s)
- Agnieszka Truszkowska
- Department of Mechanical and Aerospace EngineeringTandon School of EngineeringNew York UniversitySix MetroTech CenterBrooklynNY11201USA
| | - Brandon Behring
- Department of Mechanical and Aerospace EngineeringTandon School of EngineeringNew York UniversitySix MetroTech CenterBrooklynNY11201USA
| | - Jalil Hasanyan
- Department of Mechanical and Aerospace EngineeringTandon School of EngineeringNew York UniversitySix MetroTech CenterBrooklynNY11201USA
| | - Lorenzo Zino
- Faculty of Science and EngineeringUniversity of GroningenNijenborgh 49747 AGGroningenThe Netherlands
| | - Sachit Butail
- Department of Mechanical EngineeringNorthern Illinois UniversityDeKalbIL60115USA
| | - Emanuele Caroppo
- Mental Health DepartmentLocal Health Unit ROMA 200174RomeItaly
- Italy University Research Center He.R.A.Università Cattolica del Sacro Cuore00168RomeItaly
| | - Zhong‐Ping Jiang
- Department of Electrical and Computer EngineeringTandon School of EngineeringNew York University370 Jay StreetBrooklynNY11201USA
| | - Alessandro Rizzo
- Department of Electronics and TelecommunicationsPolitecnico di Torino10129TorinoItaly
- Office of InnovationTandon School of EngineeringNew York UniversitySix MetroTech CenterBrooklynNY11201USA
| | - Maurizio Porfiri
- Department of Mechanical and Aerospace EngineeringTandon School of EngineeringNew York UniversitySix MetroTech CenterBrooklynNY11201USA
- Department of Biomedical EngineeringTandon School of EngineeringNew York UniversitySix MetroTech CenterBrooklynNY11201USA
- Center for Urban Science and ProgressTandon School of EngineeringNew York University370 Jay StreetBrooklynNY11201USA
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The Outbreak of the COVID-19 Pandemic and its Social Impact on Education: Were Engineering Teachers Ready to Teach Online? INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH 2021; 18:ijerph18042127. [PMID: 33671636 PMCID: PMC7926760 DOI: 10.3390/ijerph18042127] [Citation(s) in RCA: 19] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/03/2021] [Revised: 02/16/2021] [Accepted: 02/17/2021] [Indexed: 12/19/2022]
Abstract
The major impacts of the COVID-19 pandemic are still affecting all social dimensions. Its specific impact on education is extensive and quite evident in the adaptation from Face-to-Face (F2F) teaching to online methodologies throughout the first wave of the pandemic and the strict rules on lockdown. As lesson formats changed radically, the relevance of evaluating student on-line learning processes in university degrees throughout this period became clear. For this purpose, the perceptions of engineering students towards five specific course units forming part of engineering degree courses at the University of Burgos, Spain, were evaluated to assess the quality of the online teaching they received. Comparisons were also drawn with their perceptions of the F2F teaching of the course units prior to the outbreak of the pandemic. According to the students' perceptions, the teachers possessed the technical knowledge, the social skills, and the personal capabilities (empathy and understanding of the at times troubled situation of each student) for a very abrupt adaptation of their courses to an online methodology. The shortcomings of the online teaching were related to its particularities and each teacher's personality traits. Overall, engineering teachers appeared well prepared for a situation of these characteristics and, if similar online teaching scenarios were ever repeated, the quality of engineering teaching appears to be guaranteed.
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Tuells J, Egoavil CM, Pena Pardo MA, Montagud AC, Montagud E, Caballero P, Zapater P, Puig-Barberá J, Hurtado-Sanchez JA. Seroprevalence Study and Cross-Sectional Survey on COVID-19 for a Plan to Reopen the University of Alicante (Spain). INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH 2021; 18:ijerph18041908. [PMID: 33669412 PMCID: PMC7920410 DOI: 10.3390/ijerph18041908] [Citation(s) in RCA: 15] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/30/2020] [Revised: 02/06/2021] [Accepted: 02/09/2021] [Indexed: 12/24/2022]
Abstract
The implementation of strategies to mitigate possible cases of COVID-19 were addressed at the University of Alicante for the safe reopening of the 2020/2021 academic year. To discover the prevalence of immunity against SARS-CoV-2, a study was designed using a rapid immunoassay test (carried out between 6 and 22 July 2020), and in addition a cross-sectional survey was conducted on risk factors, symptoms, predisposition for becoming vaccinated, and sources of information about COVID-19. A random sample, stratified by students, faculty, and administrative staff, was selected. The seroprevalence found was 2.64% (39/1479; 95% CI 1.8–3.4), and the adjusted seroprevalence was 2.89% (95% CI 2.1–3.7). The average age of the students was 23.2 years old, and 47.6 years old for staff. In relation to COVID-19, the following was found: 17.7% pauci-symptomatic, 1.3% symptomatic, 5.5% contact with cases, 4.9% confined, and 0.3% PCR positive. More than 90% complied with preventive measures. The proportion willing to receive the COVID-19 vaccine was 91%. Their sources of information were the Internet (74%) and television (70.1%). They requested that the university offer information (45.1%), training (27%), and provide Personal Protective Equipment (PPE) (26.3%). Lastly, 87.9% would repeat the test. A plan was established that included the follow-up of cases and contacts, random sample testing, training courses, bimodal teaching, a specific website, and the distribution of PPE.
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Affiliation(s)
- Jose Tuells
- Department of Community Nursing, Preventive Medicine, Public Health and History of Science, University of Alicante, 03690 Alicante, Spain
- Correspondence: (J.T.); (C.M.E.); (P.C.)
| | - Cecilia M. Egoavil
- Clinical Pharmacology Unit, General University Hospital of Alicante, Institute for Health and Biomedical Research (ISABIAL Foundation), C/Pintor Baeza, 12, 03010 Alicante, Spain; (M.A.P.P.); (P.Z.)
- Correspondence: (J.T.); (C.M.E.); (P.C.)
| | - María Angeles Pena Pardo
- Clinical Pharmacology Unit, General University Hospital of Alicante, Institute for Health and Biomedical Research (ISABIAL Foundation), C/Pintor Baeza, 12, 03010 Alicante, Spain; (M.A.P.P.); (P.Z.)
| | - Ana C. Montagud
- Immunology Department, Fundación Jiménez Díaz University Hospital, 28040 Madrid, Spain;
| | - Emilia Montagud
- Primary Care Pharmacy Service, University Hospital of Torrevieja, 03186 Torrevieja, Alicante, Spain;
| | - Pablo Caballero
- Department of Community Nursing, Preventive Medicine, Public Health and History of Science, University of Alicante, 03690 Alicante, Spain
- Correspondence: (J.T.); (C.M.E.); (P.C.)
| | - Pedro Zapater
- Clinical Pharmacology Unit, General University Hospital of Alicante, Institute for Health and Biomedical Research (ISABIAL Foundation), C/Pintor Baeza, 12, 03010 Alicante, Spain; (M.A.P.P.); (P.Z.)
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Quiroz Flores A, Liza F, Quteineh H, Czarnecka B. Variation in the timing of Covid-19 communication across universities in the UK. PLoS One 2021; 16:e0246391. [PMID: 33592014 PMCID: PMC7886223 DOI: 10.1371/journal.pone.0246391] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/14/2020] [Accepted: 01/17/2021] [Indexed: 11/19/2022] Open
Abstract
During the Covid-19 pandemic, universities in the UK used social media to raise awareness and provide guidance and advice about the disease to students and staff. We explain why some universities used social media to communicate with stakeholders sooner than others. To do so, we identified the date of the first Covid-19 related tweet posted by each university in the country and used survival models to estimate the effect of university-specific characteristics on the timing of these messages. In order to confirm our results, we supplemented our analysis with a study of the introduction of coronavirus-related university webpages. We find that universities with large numbers of students are more likely to use social media and the web to speak about the pandemic sooner than institutions with fewer students. Universities with large financial resources are also more likely to tweet sooner, but they do not introduce Covid-19 webpages faster than other universities. We also find evidence of a strong process of emulation, whereby universities are more likely to post a coronavirus-related tweet or webpage if other universities have already done so.
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Affiliation(s)
- Alejandro Quiroz Flores
- Business and Local Government Data Research Centre, University of Essex, Colchester, Essex, United Kingdom
- Department of Government, University of Essex, Colchester, Essex, United Kingdom
- Institute for Analytics and Data Science, University of Essex, Colchester, Essex, United Kingdom
| | - Farhana Liza
- Business and Local Government Data Research Centre, University of Essex, Colchester, Essex, United Kingdom
| | - Husam Quteineh
- Business and Local Government Data Research Centre, University of Essex, Colchester, Essex, United Kingdom
| | - Barbara Czarnecka
- Division of Management, Marketing and People, Business School, London South Bank University, London, United Kingdom
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Goyal R, Hotchkiss J, Schooley RT, De Gruttola V, Martin NK. Evaluation of SARS-CoV-2 transmission mitigation strategies on a university campus using an agent-based network model. Clin Infect Dis 2021; 73:1735-1741. [PMID: 33462589 PMCID: PMC7929036 DOI: 10.1093/cid/ciab037] [Citation(s) in RCA: 18] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/11/2020] [Accepted: 01/17/2021] [Indexed: 12/23/2022] Open
Abstract
Universities are faced with decisions on how to resume campus activities while mitigating SARS-CoV-2 risk. To provide guidance for these decisions, we developed an agent-based network model of SARS-CoV-2 transmission to assess the potential impact of strategies to reduce outbreaks. The model incorporates important features related to risk at the University of California San Diego. We found that structural interventions for housing (singles only) and instructional changes (from in-person to hybrid with class size caps) can substantially reduce R0, but masking and social distancing are required to reduce this to at or below 1. Within a risk mitigation scenario, increased frequency of asymptomatic testing from monthly to twice weekly has minimal impact on average outbreak size (1.1-1.9), but substantially reduces the maximum outbreak size and cumulative number of cases. We conclude that an interdependent approach incorporating risk mitigation, viral detection, and public health intervention is required to mitigate risk.
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Affiliation(s)
| | | | - Robert T Schooley
- Division of Infectious Diseases and Global Public Health, University of California San Diego, La Jolla, CA, USA
| | - Victor De Gruttola
- Department of Biostatistics, Harvard T.H. Chan School of Public Health, Boston, MA, USA
| | - Natasha K Martin
- Division of Infectious Diseases and Global Public Health, University of California San Diego, La Jolla, CA, USA.,Population Health Sciences, University of Bristol, Bristol, United Kingdom
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Asgary A, Cojocaru MG, Najafabadi MM, Wu J. Simulating preventative testing of SARS-CoV-2 in schools: policy implications. BMC Public Health 2021; 21:125. [PMID: 33430832 PMCID: PMC7801157 DOI: 10.1186/s12889-020-10153-1] [Citation(s) in RCA: 25] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/02/2020] [Accepted: 12/29/2020] [Indexed: 11/19/2022] Open
Abstract
Background School testing for SARS-CoV-2 infection has become an important policy and planning issue as schools were reopened after the summer season and as the COVID-19 pandemic continues. Decisions to test or not to test and, if testing, how many tests, how often and for how long, are complex decisions that need to be taken under uncertainty and conflicting pressures from various stakeholders. Method We have developed an agent-based model and simulation tool that can be used to analyze the outcomes and effectiveness of different testing strategies and scenarios in schools with various number of classrooms and class sizes. We have applied a modified version of a standard SEIR disease transmission model that includes symptomatic and asymptomatic infectious populations, and that incorporates feasible public health measures. We also incorporated a pre-symptomatic phase for symptomatic cases. Every day, a random number of students in each class are tested. If they tested positive, they are placed in self-isolation at home when the test results are provided. Last but not least, we have included options to allow for full testing or complete self-isolation of a classroom with a positive case. Results We present sample simulation results for parameter values based on schools and disease related information, in the Province of Ontario, Canada. The findings show that testing can be an effective method in controlling the SARS-CoV-2 infection in schools if taken frequently, with expedited test results and self-isolation of infected students at home. Conclusions Our findings show that while testing cannot eliminate the risk and has its own challenges, it can significantly control outbreaks when combined with other measures, such as masks and other protective measures.
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Affiliation(s)
- Ali Asgary
- Disaster & Emergency Management, School of Administrative Studies and Advanced Disaster, Emergency and Rapid-response Simulation, York University, Toronto, Canada.
| | | | - Mahdi M Najafabadi
- Advanced Disaster, Emergency and Rapid-response Simulation, York University, Toronto, Canada
| | - Jianhong Wu
- Canada Research Chair in Industrial and Applied Mathematics, Laboratory for Industrial and Applied Mathematics (LIAM), York University, Toronto, Ontario, Canada
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