1
|
Virués-Segovia JR, Muñoz-Mira S, Durán-Patrón R, Aleu J. Marine-derived fungi as biocatalysts. Front Microbiol 2023; 14:1125639. [PMID: 36922968 PMCID: PMC10008910 DOI: 10.3389/fmicb.2023.1125639] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2022] [Accepted: 02/08/2023] [Indexed: 03/03/2023] Open
Abstract
Marine microorganisms account for over 90% of ocean biomass and their diversity is believed to be the result of their ability to adapt to extreme conditions of the marine environment. Biotransformations are used to produce a wide range of high-added value materials, and marine-derived fungi have proven to be a source of new enzymes, even for activities not previously discovered. This review focuses on biotransformations by fungi from marine environments, including bioremediation, from the standpoint of the chemical structure of the substrate, and covers up to September 2022.
Collapse
Affiliation(s)
- Jorge R Virués-Segovia
- Departamento de Química Orgánica, Facultad de Ciencias, Campus Universitario Río San Pedro s/n, Torre sur, 4ª Planta, Universidad de Cádiz, Cádiz, Spain
| | - Salvador Muñoz-Mira
- Departamento de Química Orgánica, Facultad de Ciencias, Campus Universitario Río San Pedro s/n, Torre sur, 4ª Planta, Universidad de Cádiz, Cádiz, Spain
| | - Rosa Durán-Patrón
- Departamento de Química Orgánica, Facultad de Ciencias, Campus Universitario Río San Pedro s/n, Torre sur, 4ª Planta, Universidad de Cádiz, Cádiz, Spain
| | - Josefina Aleu
- Departamento de Química Orgánica, Facultad de Ciencias, Campus Universitario Río San Pedro s/n, Torre sur, 4ª Planta, Universidad de Cádiz, Cádiz, Spain
| |
Collapse
|
2
|
Zanin LL, de Queiroz TM, Porto ALM. Microbial transformation of Knoevenagel adducts by whole cells of Brazilian marine-derived fungi: A green approach to remove organic compounds from the aqueous medium. BIOCATAL BIOTRANSFOR 2022. [DOI: 10.1080/10242422.2022.2145556] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
Affiliation(s)
- Lucas Lima Zanin
- Laboratório de Química Orgânica e Biocatálise, Instituto de Química de São Carlos, Universidade de São Paulo, São Carlos, Brazil
| | - Thayane Melo de Queiroz
- Laboratório de Química Orgânica e Biocatálise, Instituto de Química de São Carlos, Universidade de São Paulo, São Carlos, Brazil
| | - André Luiz Meleiro Porto
- Laboratório de Química Orgânica e Biocatálise, Instituto de Química de São Carlos, Universidade de São Paulo, São Carlos, Brazil
| |
Collapse
|
3
|
Robescu MS, Loprete G, Gasparotto M, Vascon F, Filippini F, Cendron L, Bergantino E. The Family Keeps on Growing: Four Novel Fungal OYEs Characterized. Int J Mol Sci 2022; 23:3050. [PMID: 35328465 PMCID: PMC8954901 DOI: 10.3390/ijms23063050] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2022] [Revised: 03/07/2022] [Accepted: 03/09/2022] [Indexed: 11/16/2022] Open
Abstract
Aiming at expanding the portfolio of Old Yellow Enzymes (OYEs), which have been systematically studied to be employed in the chemical and pharmaceutical industries as useful biocatalysts, we decided to explore the immense reservoir of filamentous fungi. We drew from the genome of the two Ascomycetes Aspergillus niger and Botryotinia fuckeliana four new members of the OYE superfamily belonging to the classical and thermophilic-like subfamilies. The two BfOYEs show wider substrate spectra than the AnOYE homologues, which appear as more specialized biocatalysts. According to their mesophilic origins, the new enzymes neither show high thermostability nor extreme pH optimums. The crystal structures of BfOYE4 and AnOYE8 have been determined, revealing the conserved features of the thermophilic-like subclass as well as unique properties, such as a peculiar N-terminal loop involved in dimer surface interactions. For the classical representatives BfOYE1 and AnOYE2, model structures were built and analyzed, showing surprisingly wide open access to the active site cavities due to a shorter β6-loop and a disordered capping subdomain.
Collapse
Affiliation(s)
| | | | | | | | | | | | - Elisabetta Bergantino
- Synthetic Biology and Biotechnology Unit, Department of Biology, University of Padova, Viale G. Colombo 3, 35131 Padova, Italy; (M.S.R.); (G.L.); (M.G.); (F.V.); (F.F.); (L.C.)
| |
Collapse
|
4
|
Oroz‐Guinea I, Winkler CK, Glueck SM, Ditrich K, Weingarten M, Breuer M, Schachtschabel D, Kroutil W. Ene‐Reductase Catalyzed Regio‐ and Stereoselective 1,4‐Mono‐Reduction of Pseudoionone to Geranylacetone. ChemCatChem 2021. [DOI: 10.1002/cctc.202101557] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/02/2023]
Affiliation(s)
- Isabel Oroz‐Guinea
- Austrian Centre of Industrial Biotechnology c/o University of Graz Heinrichstrasse 28 8010 Graz Austria
- Institute of Chemistry University of Graz NAWI Graz Heinrichstrasse 28 8010 Graz Austria
| | - Christoph K. Winkler
- Institute of Chemistry University of Graz NAWI Graz Heinrichstrasse 28 8010 Graz Austria
| | - Silvia M. Glueck
- Austrian Centre of Industrial Biotechnology c/o University of Graz Heinrichstrasse 28 8010 Graz Austria
| | - Klaus Ditrich
- BASF SE Industrial Biotechnology Carl-Bosch-Strasse 38 67056 Ludwigshafen Germany
| | - Melanie Weingarten
- BASF SE Industrial Biotechnology Carl-Bosch-Strasse 38 67056 Ludwigshafen Germany
| | - Michael Breuer
- BASF SE Industrial Biotechnology Carl-Bosch-Strasse 38 67056 Ludwigshafen Germany
| | | | - Wolfgang Kroutil
- Austrian Centre of Industrial Biotechnology c/o University of Graz Heinrichstrasse 28 8010 Graz Austria
- Institute of Chemistry University of Graz NAWI Graz Heinrichstrasse 28 8010 Graz Austria
- BioTechMed Graz Heinrichstrasse 28 8010 Graz Austria
- Field of Excellence BioHealth University of Graz Heinrichstrasse 28 8010 Graz Austria
| |
Collapse
|
5
|
de Matos IL, Nitschke M, Porto ALM. Regioselective and chemoselective biotransformation of 2′-hydroxychalcone derivatives by marine-derived fungi. BIOCATAL BIOTRANSFOR 2021. [DOI: 10.1080/10242422.2021.1956909] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
Affiliation(s)
- Iara Lisboa de Matos
- Laboratory of Biocatalysis and Organic Synthesis, São Carlos Institute of Chemistry, University of São Paulo, São Carlos, Brazil
| | - Marcia Nitschke
- Laboratory of Microbial Biotechnology, São Carlos Institute of Chemistry, University of São Paulo, São Carlos, Brazil
| | - André Luiz Meleiro Porto
- Laboratory of Biocatalysis and Organic Synthesis, São Carlos Institute of Chemistry, University of São Paulo, São Carlos, Brazil
| |
Collapse
|
6
|
Direct Catalytic Asymmetric Synthesis of Disubstituted 4-Oxocyclohexanecarbaldehydes from Acetone and Cinnamaldehyde Derivatives. Org Lett 2021; 23:1566-1571. [DOI: 10.1021/acs.orglett.0c04277] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]
|
7
|
Ferreira IM, Fiamingo A, Campana-Filho SP, Porto ALM. Biotransformation of (E)-2-Methyl-3-Phenylacrylaldehyde Using Mycelia of Penicillium citrinum CBMAI 1186, Both Free and Immobilized on Chitosan. MARINE BIOTECHNOLOGY (NEW YORK, N.Y.) 2020; 22:348-356. [PMID: 32080775 DOI: 10.1007/s10126-020-09954-7] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/22/2019] [Accepted: 02/03/2020] [Indexed: 06/10/2023]
Abstract
This study applied the use of marine-derived fungus Penicillium citrinum CBMAI 1186 in the stereoselective reduction of the C=C double bond of the prochiral (E)-2-methyl-3-phenylacrylaldehyde 1. The fungus immobilized on chitosan, obtained by multistep ultrasound-assisted deacetylation process (Ch-USAD), produced the (S)-(+)-2-methyl-3-phenylpropan-1-ol 3 (c = 49%, 40% ee) isomer and (±)-2-methyl-3-phenylacrilic acid 4 (c = 35%); in contrast, immobilized mycelia on commercial chitosan (Ch-C) yielded the (S)-(+)-2-methyl-3-phenylpropan-1-ol 3 (c = 48%, 10% ee) and (±)-2-methyl-3-phenylpropanal 1a (c = 41%). The reaction using free mycelia gave a 40% yield of (S)-(+)-2-methyl-3-phenylpropan-1-ol 3 with 10% ee. These results showed that the crystallinity form and molecular weight of chitosan (Ch-C or Ch-USAD) used to immobilized mycelia of P. citrinum CBMAI 1186 influenced in the biotransformation of (E)-2-methyl-3-phenylacrylaldehyde 1. Therefore, marine-derived fungus P. citrinum CBMAI 1186 immobilized on chitosan can be a potential alternative in the studies of hydrogenation of the α,β-unsaturated carbon-carbon (α,β-C=C) double bond. Marine-derived fungus Penicillium citrinum CBMAI 1186 immobilized on chitosan in the stereoselective reduction of the C=C double bond of the prochiral (E)-2-methyl-3-phenylacrylaldehyde.
Collapse
Affiliation(s)
- Irlon M Ferreira
- Laboratório de Biocatálise e Síntese Orgânica Aplicada, Departamento de Ciências Exatas, Universidade Federal do Amapá, Rod. JK KM 02, Macapa, Amapá, 68902-280, Brazil.
- Instituto de Química de São Carlos, Universidade de São Paulo, Av. Trabalhador São-Carlense, 400,, Sao Carlos, São Paulo, 13566-590, Brazil.
| | - Anderson Fiamingo
- Instituto de Química de São Carlos, Universidade de São Paulo, Av. Trabalhador São-Carlense, 400,, Sao Carlos, São Paulo, 13566-590, Brazil
| | - Sergio P Campana-Filho
- Instituto de Química de São Carlos, Universidade de São Paulo, Av. Trabalhador São-Carlense, 400,, Sao Carlos, São Paulo, 13566-590, Brazil
| | - André L M Porto
- Laboratório de Química Orgânica e Biocatálise, Instituto de Química de São Carlos, Universidade de São Paulo, Av. João Dagnone, 1100, Ed. Química Ambiental, J. Santa Angelina,, Sao Carlos, São Paulo, 13563-120, Brazil.
| |
Collapse
|
8
|
Zhan XY, Zhang H, Dong Y, Yang J, He S, Shi ZC, Tang L, Wang JY. Chemoselective Hydrosilylation of the α,β-Site Double Bond in α,β- and α,β,γ,δ-Unsaturated Ketones Catalyzed by Macrosteric Borane Promoted by Hexafluoro-2-propanol. J Org Chem 2020; 85:6578-6592. [PMID: 32316729 DOI: 10.1021/acs.joc.0c00568] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
Abstract
The B(C6F5)3-catalyzed chemoselective hydrosilylation of α,β- and α,β,γ,δ-unsaturated ketones into the corresponding non-symmetric ketones in mild reaction conditions is developed. Nearly 55 substrates including those bearing reducible functional groups such as alkynyl, alkenyl, cyano, and aromatic heterocycles are chemoselectively hydrosilylated in good to excellent yields. Isotope-labeling studies revealed that hexafluoro-2-propanol also served as a hydrogen source in the process.
Collapse
Affiliation(s)
- Xiao-Yu Zhan
- Chengdu Institute of Organic Chemistry, Chinese Academy of Sciences, Chengdu 610041, PR China.,University of Chinese Academy of Sciences, Beijing 100049, PR China
| | - Hua Zhang
- Chengdu Institute of Organic Chemistry, Chinese Academy of Sciences, Chengdu 610041, PR China.,University of Chinese Academy of Sciences, Beijing 100049, PR China
| | - Yu Dong
- Chengdu Institute of Organic Chemistry, Chinese Academy of Sciences, Chengdu 610041, PR China.,University of Chinese Academy of Sciences, Beijing 100049, PR China
| | - Jian Yang
- Chengdu Institute of Organic Chemistry, Chinese Academy of Sciences, Chengdu 610041, PR China.,University of Chinese Academy of Sciences, Beijing 100049, PR China
| | - Shuai He
- Southwest Minzu University, Chengdu 610041, P. R. China
| | - Zhi-Chuan Shi
- Southwest Minzu University, Chengdu 610041, P. R. China
| | - Lei Tang
- Laboratory of Anaesthesia & Critical Care Medicine, Translational Neuroscience Center and Department of Anaesthesiology, West China Hospital, Sichuan University, Chengdu 610041, P. R. China
| | - Ji-Yu Wang
- Chengdu Institute of Organic Chemistry, Chinese Academy of Sciences, Chengdu 610041, PR China
| |
Collapse
|
9
|
Birolli WG, Zanin LL, Jimenez DEQ, Porto ALM. Synthesis of Knoevenagel Adducts Under Microwave Irradiation and Biocatalytic Ene-Reduction by the Marine-Derived Fungus Cladosporium sp. CBMAI 1237 for the Production of 2-Cyano-3-Phenylpropanamide Derivatives. MARINE BIOTECHNOLOGY (NEW YORK, N.Y.) 2020; 22:317-330. [PMID: 32124098 DOI: 10.1007/s10126-020-09953-8] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/01/2019] [Accepted: 01/27/2020] [Indexed: 06/10/2023]
Abstract
The organic synthesis has been driven by the need of sustainable processes, which also requires efficiency and cost-effectiveness. In this work, we described the synthesis of nine Knoevenagel adducts between cyanoacetamide and aromatic aldehydes ((E)-2-cyano-3-(phenyl)acrylamide derivatives), employing triethylamine as catalyst under microwave irradiation in 30 min with excellent yields (93-99% yield). Then, these adducts were employed in the C-C double bond bioreduction by the marine-derived fungus Cladosporium sp. CBMAI 1237 for obtention of 2-cyano-3-phenylpropanamide derivatives in mild conditions and short reaction time for a whole-cells reduction (phosphate buffer pH 7.0, 32 °C, 130 rpm, 8 h) with good yields (48-90%). It is important to emphasize that the experimental conditions, especially the reaction time, should be carefully evaluated for the obtention of high yields. Since a biodegradation process consumed the obtained product in extended periods, probably due to the use of the substrate as carbon and nitrogen source. This approach showed that the use of coupled and greener catalysis methods such as microwave irradiation and biocatalytic reduction, which employs unique biocatalysts like marine-derived fungi, can be an interesting tool for the obtention of organic molecules.
Collapse
Affiliation(s)
- Willian Garcia Birolli
- Instituto de Química de São Carlos, Universidade de São Paulo, Av. João Dagnone, 1100, Ed. Química Ambiental, J. Santa Angelina, São Carlos, SP, 13563-120, Brazil.
- Departamento de Química, Centro de Ciências Exatas e de Tecnologia, Universidade Federal de São Carlos, Via Washington Luiz, km 235, Caixa Postal 676, São Carlos, SP, 13565-905, Brazil.
| | - Lucas Lima Zanin
- Instituto de Química de São Carlos, Universidade de São Paulo, Av. João Dagnone, 1100, Ed. Química Ambiental, J. Santa Angelina, São Carlos, SP, 13563-120, Brazil
| | - David Esteban Quintero Jimenez
- Departamento de Química, Universidade Federal do Amapá, Rod. Duca Serra 1233, Bairro Fonte Nova Santana, Macapá, AP, 68925-000, Brazil
| | - André Luiz Meleiro Porto
- Instituto de Química de São Carlos, Universidade de São Paulo, Av. João Dagnone, 1100, Ed. Química Ambiental, J. Santa Angelina, São Carlos, SP, 13563-120, Brazil.
| |
Collapse
|
10
|
Silver nanoparticle from whole cells of the fungi Trichoderma spp. isolated from Brazilian Amazon. Biotechnol Lett 2020; 42:833-843. [PMID: 32026287 DOI: 10.1007/s10529-020-02819-y] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/26/2019] [Accepted: 01/22/2020] [Indexed: 10/25/2022]
Abstract
Metal nanoparticles are a promising approach for the development of new antimicrobial systems. Silver nanoparticles (AgNP) have a significant antibacterial activity through bacterial surface adsorption and oxidative stress induction, as indicated by recent observations. This research aimed to use endophytic fungi from the genus Trichoderma spp. isolated from the Bertholletia excelsa (Brazil-nut) seeds and the soil to biosynthesize AgNPs and also test their antibacterial activity. The use of these fungi for this purpose not only valorizes the Amazon biodiversity but it also uses cleaner and cheaper processes, being part of the Green Chemistry concept. The particles were analyzed through Ultraviolet-Visible Spectroscopy and ZetaSizer and the band of absorption at 420 nm was analyzed through Localized Surface Plasmon Resonance. After characterization, the AgNP were tested for antibacterial activity against several bacterial strains, when it was observed that their antibacterial activity was superior in Gram-negative bacteria.
Collapse
|
11
|
Birolli WG, Lima RN, Porto ALM. Applications of Marine-Derived Microorganisms and Their Enzymes in Biocatalysis and Biotransformation, the Underexplored Potentials. Front Microbiol 2019; 10:1453. [PMID: 31481935 PMCID: PMC6710449 DOI: 10.3389/fmicb.2019.01453] [Citation(s) in RCA: 50] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/01/2019] [Accepted: 06/11/2019] [Indexed: 12/19/2022] Open
Abstract
Biodiversity has been explored in the search for novel enzymes, including forests, savannas, tundras, deserts, and finally the sea. Marine microorganisms and their enzymes are capable of being active in high-salt concentration, large range of temperature, and high incidence of light and pressure, constituting an important source of unique biocatalysts. This review presents studies employing whole-cell processes of marine bacteria and fungi, aiming for new catalysts for different reactions in organic synthesis, such as reduction, oxidation, hydroxylation, hydrolysis, elimination, and conjugation. Genomics and protein engineering studies were also approached, and reactions employing isolated enzymes from different classes (oxidoreductases, hydrolases, lyases, and ligases) were described and summarized. Future biotechnological studies and process development should focus on molecular biology for the obtention of enzymes with interesting, fascinating and enhanced properties, starting from the exploration of microorganisms from the marine environment. This review approaches the literature about the use of marine-derived bacteria, fungi, and their enzymes for biocatalytic reactions of organic compounds, promoting a discussion about the possibilities of these microorganisms in the synthesis of different substances.
Collapse
Affiliation(s)
- Willian G Birolli
- Laboratory of Organic Chemistry and Biocatalysis, São Carlos Institute of Chemistry, University of São Paulo, São Carlos, Brazil.,Center of Exact Sciences and Technology, Department of Chemistry, Federal University of São Carlos, São Carlos, Brazil
| | - Rafaely N Lima
- Laboratory of Organic Chemistry and Biocatalysis, São Carlos Institute of Chemistry, University of São Paulo, São Carlos, Brazil.,Center of Exact Sciences and Technology, Department of Chemistry, Federal University of São Carlos, São Carlos, Brazil
| | - André L M Porto
- Laboratory of Organic Chemistry and Biocatalysis, São Carlos Institute of Chemistry, University of São Paulo, São Carlos, Brazil
| |
Collapse
|
12
|
Kołodziejska R, Studzińska R, Tafelska-Kaczmarek A, Pawluk H, Kwit M, Stasiak B, Woźniak A. The application of safe for humans and the environment Polyversum antifungal agent containing living cells of Pythium oligandrum for biotransformation of prochiral ketones. Bioorg Chem 2019; 92:103204. [PMID: 31472459 DOI: 10.1016/j.bioorg.2019.103204] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2019] [Revised: 08/07/2019] [Accepted: 08/14/2019] [Indexed: 02/02/2023]
Abstract
This report presents the whole-cell biotransformation of benzofuranyl-methyl ketone derivatives with the application of Polyversum antifungal agent containing Pythium oligandrum microorganism. Stereochemistry of the reduction of prochiral substrates was modified by the bioconversion conditions (concentration of reagents, a source of the carbon atom, biotransformation medium). In optimized conditions enantioselective process was noted. Secondary alcohols with excellent enantiomeric purity and high yields were obtained. The enantiomeric excess and conversion degree of 1-(benzofuran-2-yl)ethanol, 1-(7-ethylbenzofuran-2-yl)ethanol and 1-(3,7-dimethylbenzofuran-2-yl)ethanol were 99%/98.1%, 94%/94.4% and 99%/72.6%, respectively. In the presence of P. oligandrum, one of the enantiotopic hydrides of the dihydropyridine ring coenzyme is selectively transferred to a re side of the prochiral carbonyl group to give products with S configuration. This study demonstrates an inexpensive, eco-friendly approach in synthesis of optically pure benzofuran derivatives and can be an interesting alternative to organocatalysis. Furthermore, this method can be used in biotechnology processes due to its good chemical performance and a high degree of product isolation.
Collapse
Affiliation(s)
- Renata Kołodziejska
- Nicolaus Copernicus University in Toruń, Collegium Medicum in Bydgoszcz, Faculty of Medicine, Department of Medical Biology and Biochemistry, Karłowicza 24, 85-092 Bydgoszcz, Poland.
| | - Renata Studzińska
- Nicolaus Copernicus University in Toruń, Collegium Medicum in Bydgoszcz, Faculty of Pharmacy, Department of Organic Chemistry, Jurasza 2, 85-089 Bydgoszcz, Poland.
| | | | - Hanna Pawluk
- Nicolaus Copernicus University in Toruń, Collegium Medicum in Bydgoszcz, Faculty of Medicine, Department of Medical Biology and Biochemistry, Karłowicza 24, 85-092 Bydgoszcz, Poland.
| | - Marcin Kwit
- Adam Mickiewicz University, Department of Chemistry, Umultowska 89B, 61-614 Poznan, Poland.
| | - Bartosz Stasiak
- Adam Mickiewicz University, Department of Chemistry, Umultowska 89B, 61-614 Poznan, Poland.
| | - Alina Woźniak
- Nicolaus Copernicus University in Toruń, Collegium Medicum in Bydgoszcz, Faculty of Medicine, Department of Medical Biology and Biochemistry, Karłowicza 24, 85-092 Bydgoszcz, Poland.
| |
Collapse
|
13
|
Jimenez DEQ, Barreiro JC, Dos Santos FM, de Vasconcellos SP, Porto ALM, Batista JM. Enantioselective ene-reduction of E-2-cyano-3-(furan-2-yl) acrylamide by marine and terrestrial fungi and absolute configuration of (R)-2-cyano-3-(furan-2-yl) propanamide determined by calculations of electronic circular dichroism (ECD) spectra. Chirality 2019; 31:534-542. [PMID: 31197903 DOI: 10.1002/chir.23078] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/21/2019] [Revised: 04/09/2019] [Accepted: 04/11/2019] [Indexed: 11/07/2022]
Abstract
This work reports the green organic chemistry synthesis of E-2-cyano-3(furan-2-yl) acrylamide under microwave radiation (55 W), as well as the use of filamentous marine and terrestrial-derived fungi, in the first ene-reduction of 2-cyano-3-(furan-2-yl) acrylamide to (R)-2-cyano-3-(furan-2-yl)propanamide. The fungal strains screened included Penicillium citrinum CBMAI 1186, Trichoderma sp. CBMAI 932 and Aspergillus sydowii CBMAI 935, and the filamentous terrestrial fungi Aspergillus sp. FPZSP 146 and Aspergillus sp. FPZSP 152. A compound with an uncommon CN-bearing stereogenic center at the α-C position was obtained by enantioselective reactions mediated in the presence of the microorganisms yielding the (R)-2-cyano-3-(furan-2-yl) propanamide 3a. Its isolated yield and e.e. ranged from 86% to 98% and 39% to 99%, respectively. The absolute configuration of the biotransformation products was determined by time-dependent density functional theory (TD-DFT) calculations of electronic circular dichroism (ECD) spectra. Finally, the tautomerization of 2-cyano-3-(furan-2-yl) propanamide 3a to form an achiral ketenimine was observed and investigated in presence of protic solvents.
Collapse
Affiliation(s)
- David E Q Jimenez
- Departamento de Química, Universidade Federal do Amapá, Macapá, Brazil.,Laboratório de Química Orgânica e Biocatálise, Instituto de Química de São Carlos, Universidade de São Paulo - USP, São Carlos, Brazil
| | - Juliana C Barreiro
- Laboratório de Química Orgânica e Biocatálise, Instituto de Química de São Carlos, Universidade de São Paulo - USP, São Carlos, Brazil
| | - Fernando M Dos Santos
- Departamento de Química Orgânica, Instituto de Química, Universidade Federal Fluminense, Niterói, Brazil
| | - Suzan P de Vasconcellos
- Departamento de Ciências Farmacêuticas, Universidade Federal de São Paulo-UNIFESP, Diadema, Brazil
| | - André L M Porto
- Laboratório de Química Orgânica e Biocatálise, Instituto de Química de São Carlos, Universidade de São Paulo - USP, São Carlos, Brazil
| | - João M Batista
- Instituto de Ciência e Tecnologia, Universidade Federal de São Paulo-UNIFESP, São José dos Campos, Brazil
| |
Collapse
|
14
|
Toogood HS, Scrutton NS. Discovery, Characterisation, Engineering and Applications of Ene Reductases for Industrial Biocatalysis. ACS Catal 2019; 8:3532-3549. [PMID: 31157123 PMCID: PMC6542678 DOI: 10.1021/acscatal.8b00624] [Citation(s) in RCA: 158] [Impact Index Per Article: 31.6] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Abstract
Recent studies of multiple enzyme families collectively referred to as ene-reductases (ERs) have highlighted potential industrial application of these biocatalysts in the production of fine and speciality chemicals. Processes have been developed whereby ERs contribute to synthetic routes as isolated enzymes, components of multi-enzyme cascades, and more recently in metabolic engineering and synthetic biology programmes using microbial cell factories to support chemicals production. The discovery of ERs from previously untapped sources and the expansion of directed evolution screening programmes, coupled to deeper mechanistic understanding of ER reactions, have driven their use in natural product and chemicals synthesis. Here we review developments, challenges and opportunities for the use of ERs in fine and speciality chemicals manufacture. The ER research field is rapidly expanding and the focus of this review is on developments that have emerged predominantly over the last 4 years.
Collapse
Affiliation(s)
- Helen S. Toogood
- School of Chemistry, Faculty of Science and Engineering, University of Manchester, 131 Princess Street, Manchester M1 7DN, U.K
| | - Nigel S. Scrutton
- School of Chemistry, Faculty of Science and Engineering, University of Manchester, 131 Princess Street, Manchester M1 7DN, U.K
| |
Collapse
|
15
|
Morais ATB, Ferreira IM, Jimenez DE, Porto AL. Synthesis of α-chloroacetophenones with NH4Cl/Oxone® in situ followed by bioreduction with whole cells of marine-derived fungi. BIOCATALYSIS AND AGRICULTURAL BIOTECHNOLOGY 2018. [DOI: 10.1016/j.bcab.2018.08.003] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
|
16
|
Garzón-Posse F, Becerra-Figueroa L, Hernández-Arias J, Gamba-Sánchez D. Whole Cells as Biocatalysts in Organic Transformations. Molecules 2018; 23:E1265. [PMID: 29799483 PMCID: PMC6099930 DOI: 10.3390/molecules23061265] [Citation(s) in RCA: 50] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/08/2018] [Revised: 05/21/2018] [Accepted: 05/22/2018] [Indexed: 11/17/2022] Open
Abstract
Currently, the power and usefulness of biocatalysis in organic synthesis is undeniable, mainly due to the very high enantiomeric excess reached using enzymes, in an attempt to emulate natural processes. However, the use of isolated enzymes has some significant drawbacks, the most important of which is cost. The use of whole cells has emerged as a useful strategy with several advantages over isolated enzymes; for this reason, modern research in this field is increasing, and various reports have been published recently. This review surveys the most recent developments in the enantioselective reduction of carbon-carbon double bonds and prochiral ketones and the oxidation of prochiral sulfides using whole cells as biocatalytic systems.
Collapse
Affiliation(s)
- Fabián Garzón-Posse
- Laboratory of Organic Synthesis Bio- and Organocatalysis, Chemistry Department, Universidad de los Andes, Cra. 1No 18A-12 Q:305, Bogotá 111711, Colombia.
| | - Liliana Becerra-Figueroa
- Laboratory of Organic Synthesis Bio- and Organocatalysis, Chemistry Department, Universidad de los Andes, Cra. 1No 18A-12 Q:305, Bogotá 111711, Colombia.
| | - José Hernández-Arias
- Laboratory of Organic Synthesis Bio- and Organocatalysis, Chemistry Department, Universidad de los Andes, Cra. 1No 18A-12 Q:305, Bogotá 111711, Colombia.
| | - Diego Gamba-Sánchez
- Laboratory of Organic Synthesis Bio- and Organocatalysis, Chemistry Department, Universidad de los Andes, Cra. 1No 18A-12 Q:305, Bogotá 111711, Colombia.
| |
Collapse
|
17
|
Alvarenga N, Porto AL, Barreiro JC. Enantioselective separation of (±)-β-hydroxy-1,2,3-triazoles by supercritical fluid chromatography and high-performance liquid chromatography. Chirality 2018; 30:890-899. [DOI: 10.1002/chir.22851] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/11/2017] [Revised: 02/14/2018] [Accepted: 02/16/2018] [Indexed: 11/08/2022]
Affiliation(s)
- Natália Alvarenga
- Laboratório de Química Orgânica e Biocatálise, Instituto de Química de São Carlos; Universidade de São Paulo; São Carlos SP Brazil
| | - André L.M. Porto
- Laboratório de Química Orgânica e Biocatálise, Instituto de Química de São Carlos; Universidade de São Paulo; São Carlos SP Brazil
| | - Juliana Cristina Barreiro
- Laboratório de Química Orgânica e Biocatálise, Instituto de Química de São Carlos; Universidade de São Paulo; São Carlos SP Brazil
| |
Collapse
|
18
|
Jimenez DE, Ferreira IM, Birolli WG, Fonseca LP, Porto AL. Synthesis and biocatalytic ene-reduction of Knoevenagel condensation compounds by the marine-derived fungus Penicillium citrinum CBMAI 1186. Tetrahedron 2016. [DOI: 10.1016/j.tet.2016.02.014] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
|
19
|
Lima RN, Porto ALM. Recent Advances in Marine Enzymes for Biotechnological Processes. ADVANCES IN FOOD AND NUTRITION RESEARCH 2016; 78:153-92. [PMID: 27452170 DOI: 10.1016/bs.afnr.2016.06.005] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
Abstract
In the last decade, new trends in the food and pharmaceutical industries have increased concern for the quality and safety of products. The use of biocatalytic processes using marine enzymes has become an important and useful natural product for biotechnological applications. Bioprocesses using biocatalysts like marine enzymes (fungi, bacteria, plants, animals, algae, etc.) offer hyperthermostability, salt tolerance, barophilicity, cold adaptability, chemoselectivity, regioselectivity, and stereoselectivity. Currently, enzymatic methods are used to produce a large variety of products that humans consume, and the specific nature of the enzymes including processing under mild pH and temperature conditions result in fewer unwanted side-effects and by-products. This offers high selectivity in industrial processes. The marine habitat has been become increasingly studied because it represents a huge source potential biocatalysts. Enzymes include oxidoreductases, hydrolases, transferases, isomerases, ligases, and lyases that can be used in food and pharmaceutical applications. Finally, recent advances in biotechnological processes using enzymes of marine organisms (bacterial, fungi, algal, and sponges) are described and also our work on marine organisms from South America, especially marine-derived fungi and bacteria involved in biotransformations and biodegradation of organic compounds.
Collapse
Affiliation(s)
- R N Lima
- Laboratório de Química Orgânica e Biocatálise, Instituto de Química de São Carlos, Universidade de São Paulo, São Carlos, São Paulo, Brazil
| | - A L M Porto
- Laboratório de Química Orgânica e Biocatálise, Instituto de Química de São Carlos, Universidade de São Paulo, São Carlos, São Paulo, Brazil.
| |
Collapse
|
20
|
Chemoselective reduction of chalcones by marine-derived fungus Penicillium raistrickii. N Biotechnol 2016. [DOI: 10.1016/j.nbt.2016.06.1070] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
|
21
|
Hydrogenation of bis-α,β-unsaturated enones mediated by filamentous fungi. BIOCATALYSIS AND AGRICULTURAL BIOTECHNOLOGY 2015. [DOI: 10.1016/j.bcab.2015.03.001] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
|