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Acharya M, Deo RC, Tao X, Barua PD, Devi A, Atmakuru A, Tan RS. Deep learning techniques for automated Alzheimer's and mild cognitive impairment disease using EEG signals: A comprehensive review of the last decade (2013 - 2024). COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE 2025; 259:108506. [PMID: 39581069 DOI: 10.1016/j.cmpb.2024.108506] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/13/2024] [Revised: 10/29/2024] [Accepted: 11/06/2024] [Indexed: 11/26/2024]
Abstract
BACKGROUND AND OBJECTIVES Mild Cognitive Impairment (MCI) and Alzheimer's Disease (AD) are progressive neurological disorders that significantly impair the cognitive functions, memory, and daily activities. They affect millions of individuals worldwide, posing a significant challenge for its diagnosis and management, leading to detrimental impacts on patients' quality of lives and increased burden on caregivers. Hence, early detection of MCI and AD is crucial for timely intervention and effective disease management. METHODS This study presents a comprehensive systematic review focusing on the applications of deep learning in detecting MCI and AD using electroencephalogram (EEG) signals. Through a rigorous literature screening process based on the Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA) guidelines, the research has investigated 74 different papers in detail to analyze the different approaches used to detect MCI and AD neurological disorders. RESULTS The findings of this study stand out as the first to deal with the classification of dual MCI and AD (MCI+AD) using EEG signals. This unique approach has enabled us to highlight the state-of-the-art high-performing models, specifically focusing on deep learning while examining their strengths and limitations in detecting the MCI, AD, and the MCI+AD comorbidity situations. CONCLUSION The present study has not only identified the current limitations in deep learning area for MCI and AD detection but also proposes specific future directions to address these neurological disorders by implement best practice deep learning approaches. Our main goal is to offer insights as references for future research encouraging the development of deep learning techniques in early detection and diagnosis of MCI and AD neurological disorders. By recommending the most effective deep learning tools, we have also provided a benchmark for future research, with clear implications for the practical use of these techniques in healthcare.
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Affiliation(s)
- Madhav Acharya
- School of Mathematics, Physics and Computing, University of Southern Queensland, Springfield Central, QLD 4300, Australia.
| | - Ravinesh C Deo
- School of Mathematics, Physics and Computing, University of Southern Queensland, Springfield Central, QLD 4300, Australia.
| | - Xiaohui Tao
- School of Mathematics, Physics and Computing, University of Southern Queensland, Toowoomba QLD 4350, Australia
| | - Prabal Datta Barua
- School of Mathematics, Physics and Computing, University of Southern Queensland, Springfield Central, QLD 4300, Australia; Cogninet AI, Sydney, NSW 2010, Australia; Faculty of Engineering and Information Technology, University of Technology Sydney, Sydney, NSW 2007, Australia; School of Computing and Information Science, Anglia Ruskin University Cambridge Campus, UK; Australian International Institute of Higher Education, Sydney, NSW 2000, Australia; School of Science Technology, University of New England, Australia; School of Biosciences, Taylor's University, Malaysia; School of Computing, SRM Institute of Science and Technology, India; School of Science and Technology, Kumamoto University, Japan; Sydney School of Education and Social Work, University of Sydney, Australia
| | - Aruna Devi
- School of Education and Tertiary Access, University of the Sunshine Coast, Petrie, QLD 4502, Australia
| | | | - Ru-San Tan
- National Heart Centre Singapore, Singapore, Duke-NUS Medical School, Singapore
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Hata M, Miyazaki Y, Mori K, Yoshiyama K, Akamine S, Kanemoto H, Gotoh S, Omori H, Hirashima A, Satake Y, Suehiro T, Takahashi S, Ikeda M. Screening of Aβ and phosphorylated tau status in the cerebrospinal fluid through machine learning analysis of portable electroencephalography data. Sci Rep 2025; 15:2067. [PMID: 39820097 PMCID: PMC11739687 DOI: 10.1038/s41598-025-86449-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/10/2024] [Accepted: 01/10/2025] [Indexed: 01/19/2025] Open
Abstract
Diagnosing Alzheimer's disease (AD) through pathological markers is typically costly and invasive. This study aims to find a noninvasive, cost-effective method using portable electroencephalography (EEG) to detect changes in AD-related biomarkers in cerebrospinal fluid (CSF). A total of 102 patients, both with and without AD-related biomarker changes (amyloid beta and phosphorylated tau), were recorded using a 2-minute resting-state portable EEG. A machine-learning algorithm then analyzed the EEG data to identify these biomarker changes. The results showed that the machine learning model could distinguish patients with AD-related biomarker changes, achieving 68.1% accuracy (AUROC 0.75) for amyloid beta and 71.2% accuracy (AUROC 0.77) for phosphorylated tau, with gamma activities being key features. When excluding cases with idiopathic normal pressure hydrocephalus, accuracy improved to 74.1% (AUROC 0.80) for amyloid beta and 73.1% (AUROC 0.80) for phosphorylated tau. This study suggests that portable EEG combined with machine learning is a promising noninvasive and cost-effective tool for early AD-related pathological marker screening, which could enhance neurophysiological understanding and diagnostic accessibility.
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Affiliation(s)
- Masahiro Hata
- Department of Psychiatry, Osaka University Graduate School of Medicine, 2-2 Yamadaoka, Suita, 565-0871, Osaka, Japan.
| | - Yuki Miyazaki
- Department of Psychiatry, Osaka University Graduate School of Medicine, 2-2 Yamadaoka, Suita, 565-0871, Osaka, Japan
| | - Kohji Mori
- Department of Psychiatry, Osaka University Graduate School of Medicine, 2-2 Yamadaoka, Suita, 565-0871, Osaka, Japan
| | - Kenji Yoshiyama
- Department of Psychiatry, Osaka University Graduate School of Medicine, 2-2 Yamadaoka, Suita, 565-0871, Osaka, Japan
| | - Shoshin Akamine
- Department of Psychiatry, Osaka University Graduate School of Medicine, 2-2 Yamadaoka, Suita, 565-0871, Osaka, Japan
| | - Hideki Kanemoto
- Department of Psychiatry, Osaka University Graduate School of Medicine, 2-2 Yamadaoka, Suita, 565-0871, Osaka, Japan
- Health and Counseling Center, Osaka University, Osaka, Japan
| | - Shiho Gotoh
- Department of Psychiatry, Osaka University Graduate School of Medicine, 2-2 Yamadaoka, Suita, 565-0871, Osaka, Japan
| | - Hisaki Omori
- Department of Psychiatry, Osaka University Graduate School of Medicine, 2-2 Yamadaoka, Suita, 565-0871, Osaka, Japan
- Shichiyama Hospital, Osaka, Japan
| | - Atsuya Hirashima
- Department of Psychiatry, Osaka University Graduate School of Medicine, 2-2 Yamadaoka, Suita, 565-0871, Osaka, Japan
- Osaka Psychiatric Medical Center, Osaka, Japan
| | - Yuto Satake
- Department of Psychiatry, Osaka University Graduate School of Medicine, 2-2 Yamadaoka, Suita, 565-0871, Osaka, Japan
| | - Takashi Suehiro
- Department of Psychiatry, Osaka University Graduate School of Medicine, 2-2 Yamadaoka, Suita, 565-0871, Osaka, Japan
| | - Shun Takahashi
- Department of Psychiatry, Osaka University Graduate School of Medicine, 2-2 Yamadaoka, Suita, 565-0871, Osaka, Japan
- Department of Occupational Therapy, Graduate School of Rehabilitation Science, Osaka Metropolitan University, Osaka, Japan
- Clinical Research and Education Center, Asakayama General Hospital, Osaka, Japan
- Department of Neuropsychiatry, Wakayama Medical University, Wakayama, Japan
| | - Manabu Ikeda
- Department of Psychiatry, Osaka University Graduate School of Medicine, 2-2 Yamadaoka, Suita, 565-0871, Osaka, Japan
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Abadal S, Galván P, Mármol A, Mammone N, Ieracitano C, Lo Giudice M, Salvini A, Morabito FC. Graph neural networks for electroencephalogram analysis: Alzheimer's disease and epilepsy use cases. Neural Netw 2025; 181:106792. [PMID: 39471577 DOI: 10.1016/j.neunet.2024.106792] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/01/2023] [Revised: 07/21/2024] [Accepted: 10/07/2024] [Indexed: 11/01/2024]
Abstract
Electroencephalography (EEG) is widely used as a non-invasive technique for the diagnosis of several brain disorders, including Alzheimer's disease and epilepsy. Until recently, diseases have been identified over EEG readings by human experts, which may not only be specific and difficult to find, but are also subject to human error. Despite the recent emergence of machine learning methods for the interpretation of EEGs, most approaches are not capable of capturing the underlying arbitrary non-Euclidean relations between signals in the different regions of the human brain. In this context, Graph Neural Networks (GNNs) have gained attention for their ability to effectively analyze complex relationships within different types of graph-structured data. This includes EEGs, a use case still relatively unexplored. In this paper, we aim to bridge this gap by presenting a study that applies GNNs for the EEG-based detection of Alzheimer's disease and discrimination of two different types of seizures. To this end, we demonstrate the value of GNNs by showing that a single GNN architecture can achieve state-of-the-art performance in both use cases. Through design space explorations and explainability analysis, we develop a graph-based transformer that achieves cross-validated accuracies over 89% and 96% in the ternary classification variants of Alzheimer's disease and epilepsy use cases, respectively, matching the intuitions drawn by expert neurologists. We also argue about the computational efficiency, generalizability and potential for real-time operation of GNNs for EEGs, positioning them as a valuable tool for classifying various neurological pathologies and opening up new prospects for research and clinical practice.
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Affiliation(s)
- Sergi Abadal
- Universitat Politècnica de Catalunya, 08034, Barcelona, Spain.
| | - Pablo Galván
- Universitat Politècnica de Catalunya, 08034, Barcelona, Spain
| | - Alberto Mármol
- Universitat Politècnica de Catalunya, 08034, Barcelona, Spain
| | - Nadia Mammone
- DICEAM, University Mediterranea of Reggio Calabria, 89122, Reggio Calabria, Italy
| | - Cosimo Ieracitano
- DICEAM, University Mediterranea of Reggio Calabria, 89122, Reggio Calabria, Italy
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Simmatis LER, Russo EE, Altug Y, Murugathas V, Janevski J, Oh D, Chiu Q, Harmsen IE, Samuel N. Towards discovery and implementation of neurophysiologic biomarkers of Alzheimer's disease using entropy methods. Neuroscience 2024; 558:105-113. [PMID: 39163898 DOI: 10.1016/j.neuroscience.2024.08.017] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/06/2024] [Revised: 07/23/2024] [Accepted: 08/11/2024] [Indexed: 08/22/2024]
Abstract
Alzheimer's disease (AD) is a prevalent and debilitating neurodegenerative disease that leads to substantial loss of quality of life. Therapies currently available for AD do not modify the disease course and have limited efficacy in symptom control. As such, novel and precise therapies tailored to individual patients' neurophysiologic profiles are needed. Functional neuroimaging tools have demonstrated substantial potential to provide quantifiable insight into brain function in various neurologic disorders, particularly AD. Entropy, a novel analysis for better understanding the nonlinear nature of neurophysiological data, has demonstrated consistent accuracy in disease detection. This literature review characterizes the use of entropy-based analyses from functional neuroimaging tools, including electroencephalography (EEG) and magnetoencephalography (MEG), in patients with AD for disease detection, therapeutic response measurement, and providing clinical insights.
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Affiliation(s)
- Leif E R Simmatis
- Faculty of Medicine, University of Toronto, Toronto, Ontario, Canada; Cove Neurosciences Inc., Toronto, Ontario, Canada
| | - Emma E Russo
- Cove Neurosciences Inc., Toronto, Ontario, Canada
| | | | - Vijairam Murugathas
- Faculty of Medicine, University of Toronto, Toronto, Ontario, Canada; Cove Neurosciences Inc., Toronto, Ontario, Canada
| | - Josh Janevski
- Faculty of Medicine, University of Toronto, Toronto, Ontario, Canada; Cove Neurosciences Inc., Toronto, Ontario, Canada
| | - Donghun Oh
- Faculty of Medicine, University of Toronto, Toronto, Ontario, Canada; Cove Neurosciences Inc., Toronto, Ontario, Canada
| | - Queenny Chiu
- Faculty of Medicine, University of Toronto, Toronto, Ontario, Canada; Cove Neurosciences Inc., Toronto, Ontario, Canada
| | - Irene E Harmsen
- Faculty of Medicine, University of Toronto, Toronto, Ontario, Canada; Cove Neurosciences Inc., Toronto, Ontario, Canada
| | - Nardin Samuel
- Faculty of Medicine, University of Toronto, Toronto, Ontario, Canada; Cove Neurosciences Inc., Toronto, Ontario, Canada.
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5
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Shang S, Shi Y, Zhang Y, Liu M, Zhang H, Wang P, Zhuang L. Artificial intelligence for brain disease diagnosis using electroencephalogram signals. J Zhejiang Univ Sci B 2024; 25:914-940. [PMID: 39420525 PMCID: PMC11494159 DOI: 10.1631/jzus.b2400103] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/25/2024] [Accepted: 08/27/2024] [Indexed: 10/19/2024]
Abstract
Brain signals refer to electrical signals or metabolic changes that occur as a consequence of brain cell activity. Among the various non-invasive measurement methods, electroencephalogram (EEG) stands out as a widely employed technique, providing valuable insights into brain patterns. The deviations observed in EEG reading serve as indicators of abnormal brain activity, which is associated with neurological diseases. Brain‒computer interface (BCI) systems enable the direct extraction and transmission of information from the human brain, facilitating interaction with external devices. Notably, the emergence of artificial intelligence (AI) has had a profound impact on the enhancement of precision and accuracy in BCI technology, thereby broadening the scope of research in this field. AI techniques, encompassing machine learning (ML) and deep learning (DL) models, have demonstrated remarkable success in classifying and predicting various brain diseases. This comprehensive review investigates the application of AI in EEG-based brain disease diagnosis, highlighting advancements in AI algorithms.
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Affiliation(s)
- Shunuo Shang
- Biosensor National Special Laboratory, Key Laboratory for Biomedical Engineering of Education Ministry, Department of Biomedical Engineering, Zhejiang University, Hangzhou 310027, China
- The MOE Frontier Science Center for Brain Science & Brain-Machine Integration, Zhejiang University, Hangzhou 310027, China
| | - Yingqian Shi
- Biosensor National Special Laboratory, Key Laboratory for Biomedical Engineering of Education Ministry, Department of Biomedical Engineering, Zhejiang University, Hangzhou 310027, China
| | - Yajie Zhang
- Biosensor National Special Laboratory, Key Laboratory for Biomedical Engineering of Education Ministry, Department of Biomedical Engineering, Zhejiang University, Hangzhou 310027, China
| | - Mengxue Liu
- Biosensor National Special Laboratory, Key Laboratory for Biomedical Engineering of Education Ministry, Department of Biomedical Engineering, Zhejiang University, Hangzhou 310027, China
| | - Hong Zhang
- Biosensor National Special Laboratory, Key Laboratory for Biomedical Engineering of Education Ministry, Department of Biomedical Engineering, Zhejiang University, Hangzhou 310027, China
| | - Ping Wang
- Biosensor National Special Laboratory, Key Laboratory for Biomedical Engineering of Education Ministry, Department of Biomedical Engineering, Zhejiang University, Hangzhou 310027, China.
- The MOE Frontier Science Center for Brain Science & Brain-Machine Integration, Zhejiang University, Hangzhou 310027, China.
- The State Key Lab of Brain-Machine Intelligence, Zhejiang University, Hangzhou 310027, China.
| | - Liujing Zhuang
- Biosensor National Special Laboratory, Key Laboratory for Biomedical Engineering of Education Ministry, Department of Biomedical Engineering, Zhejiang University, Hangzhou 310027, China.
- The State Key Lab of Brain-Machine Intelligence, Zhejiang University, Hangzhou 310027, China.
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6
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Singh YP, Lobiyal DK. A comparative study of early stage Alzheimer's disease classification using various transfer learning CNN frameworks. NETWORK (BRISTOL, ENGLAND) 2024:1-29. [PMID: 39367861 DOI: 10.1080/0954898x.2024.2406946] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/02/2022] [Revised: 08/30/2023] [Accepted: 09/06/2024] [Indexed: 10/07/2024]
Abstract
The current research explores the improvements in predictive performance and computational efficiency that machine learning and deep learning methods have made over time. Specifically, the application of transfer learning concepts within Convolutional Neural Networks (CNNs) has proved useful for diagnosing and classifying the various stages of Alzheimer's disease. Using base architectures such as Xception, InceptionResNetV2, DenseNet201, InceptionV3, ResNet50, and MobileNetV2, this study extends these models by adding batch normalization (BN), dropout, and dense layers. These enhancements improve the model's effectiveness and precision in addressing the specified medical issue. The proposed model is rigorously validated and evaluated using publicly available Kaggle MRI Alzheimer's data consisting of 1280 testing images and 5120 patient training images. For comprehensive performance evaluation, precision, recall, F1-score, and accuracy metrics are utilized. The findings indicate that the Xception method is the most promising of those considered. Without employing five K-fold techniques, this model obtains a 99% accuracy and 0.135 loss score. In addition, integrating five K-fold methods enhances the accuracy to 99.68% while decreasing the loss score to 0.120. The research further included the evaluation of the Receiver Operating Characteristic Area Under the Curve (ROC-AUC) for various classes and models. As a result, our model may detect and diagnose Alzheimer's disease quickly and accurately.
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Affiliation(s)
| | - Daya Krishan Lobiyal
- School of Computer & Systems Sciences, Jawaharlal Nehru University, New Delhi, India
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7
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Dogan S, Barua PD, Baygin M, Tuncer T, Tan RS, Ciaccio EJ, Fujita H, Devi A, Acharya UR. Lattice 123 pattern for automated Alzheimer's detection using EEG signal. Cogn Neurodyn 2024; 18:2503-2519. [PMID: 39555305 PMCID: PMC11564704 DOI: 10.1007/s11571-024-10104-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/16/2023] [Revised: 03/01/2024] [Accepted: 03/07/2024] [Indexed: 11/19/2024] Open
Abstract
This paper presents an innovative feature engineering framework based on lattice structures for the automated identification of Alzheimer's disease (AD) using electroencephalogram (EEG) signals. Inspired by the Shannon information entropy theorem, we apply a probabilistic function to create the novel Lattice123 pattern, generating two directed graphs with minimum and maximum distance-based kernels. Using these graphs and three kernel functions (signum, upper ternary, and lower ternary), we generate six feature vectors for each input signal block to extract textural features. Multilevel discrete wavelet transform (MDWT) was used to generate low-level wavelet subbands. Our proposed model mirrors deep learning approaches, facilitating feature extraction in frequency and spatial domains at various levels. We used iterative neighborhood component analysis to select the most discriminative features from the extracted vectors. An iterative hard majority voting and a greedy algorithm were used to generate voted vectors to select the optimal channel-wise and overall results. Our proposed model yielded a classification accuracy of more than 98% and a geometric mean of more than 96%. Our proposed Lattice123 pattern, dynamic graph generation, and MDWT-based multilevel feature extraction can detect AD accurately as the proposed pattern can extract subtle changes from the EEG signal accurately. Our prototype is ready to be validated using a large and diverse database.
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Affiliation(s)
- Sengul Dogan
- Department of Digital Forensics Engineering, College of Technology, Firat University, Elazig, Turkey
| | - Prabal Datta Barua
- School of Business (Information System), University of Southern Queensland, Springfield, Australia
| | - Mehmet Baygin
- Department of Computer Engineering, College of Engineering, Erzurum Technical University, Erzurum, Turkey
| | - Turker Tuncer
- Department of Digital Forensics Engineering, College of Technology, Firat University, Elazig, Turkey
| | - Ru-San Tan
- Department of Cardiology, National Heart Centre Singapore, Singapore, Singapore
- Duke-NUS Medical School, Singapore, Singapore
| | - Edward J. Ciaccio
- Department of Medicine, Columbia University Irving Medical Center, New York, NY USA
| | - Hamido Fujita
- Malaysia-Japan International Institute of Technology (MJIIT), Universiti Teknologi Malaysia, 54100 Kuala Lumpur, Malaysia
- Andalusian Research Institute in Data Science and Computational Intelligence, University of Granada, Granada, Spain
- Regional Research Center, Iwate Prefectural University, Iwate, Japan
| | - Aruna Devi
- School of Education and Tertiary Access, University of the Sunshine Coast, Sippy Downs, Caboolture Campus, QLD Australia
| | - U. Rajendra Acharya
- School of Mathematics, Physics and Computing, University of Southern Queensland, Springfield, Australia
- Centre for Health Research, University of Southern Queensland, Springfield, Australia
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Malik I, Iqbal A, Gu YH, Al-antari MA. Deep Learning for Alzheimer's Disease Prediction: A Comprehensive Review. Diagnostics (Basel) 2024; 14:1281. [PMID: 38928696 PMCID: PMC11202897 DOI: 10.3390/diagnostics14121281] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/20/2024] [Revised: 06/10/2024] [Accepted: 06/13/2024] [Indexed: 06/28/2024] Open
Abstract
Alzheimer's disease (AD) is a neurological disorder that significantly impairs cognitive function, leading to memory loss and eventually death. AD progresses through three stages: early stage, mild cognitive impairment (MCI) (middle stage), and dementia. Early diagnosis of Alzheimer's disease is crucial and can improve survival rates among patients. Traditional methods for diagnosing AD through regular checkups and manual examinations are challenging. Advances in computer-aided diagnosis systems (CADs) have led to the development of various artificial intelligence and deep learning-based methods for rapid AD detection. This survey aims to explore the different modalities, feature extraction methods, datasets, machine learning techniques, and validation methods used in AD detection. We reviewed 116 relevant papers from repositories including Elsevier (45), IEEE (25), Springer (19), Wiley (6), PLOS One (5), MDPI (3), World Scientific (3), Frontiers (3), PeerJ (2), Hindawi (2), IO Press (1), and other multiple sources (2). The review is presented in tables for ease of reference, allowing readers to quickly grasp the key findings of each study. Additionally, this review addresses the challenges in the current literature and emphasizes the importance of interpretability and explainability in understanding deep learning model predictions. The primary goal is to assess existing techniques for AD identification and highlight obstacles to guide future research.
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Affiliation(s)
- Isra Malik
- Department of Computer Science, COMSATS University Islamabad, Wah Campus, Wah Cantt 44000, Pakistan
| | - Ahmed Iqbal
- Department of Computer Science, Sir Syed Case Institute of Technology, Islamabad 45230, Pakistan
| | - Yeong Hyeon Gu
- Department of Artificial Intelligence and Data Science, College of AI Convergence, Daeyang AI Center, Sejong University, Seoul 05006, Republic of Korea
| | - Mugahed A. Al-antari
- Department of Artificial Intelligence and Data Science, College of AI Convergence, Daeyang AI Center, Sejong University, Seoul 05006, Republic of Korea
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Sibilano E, Buongiorno D, Lassi M, Grippo A, Bessi V, Sorbi S, Mazzoni A, Bevilacqua V, Brunetti A. Understanding the Role of Self-Attention in a Transformer Model for the Discrimination of SCD From MCI Using Resting-State EEG. IEEE J Biomed Health Inform 2024; 28:3422-3433. [PMID: 38635390 DOI: 10.1109/jbhi.2024.3390606] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/20/2024]
Abstract
The identification of EEG biomarkers to discriminate Subjective Cognitive Decline (SCD) from Mild Cognitive Impairment (MCI) conditions is a complex task which requires great clinical effort and expertise. We exploit the self-attention component of the Transformer architecture to obtain physiological explanations of the model's decisions in the discrimination of 56 SCD and 45 MCI patients using resting-state EEG. Specifically, an interpretability workflow leveraging attention scores and time-frequency analysis of EEG epochs through Continuous Wavelet Transform is proposed. In the classification framework, models are trained and validated with 5-fold cross-validation and evaluated on a test set obtained by selecting 20% of the total subjects. Ablation studies and hyperparameter tuning tests are conducted to identify the optimal model configuration. Results show that the best performing model, which achieves acceptable results both on epochs' and patients' classification, is capable of finding specific EEG patterns that highlight changes in the brain activity between the two conditions. We demonstrate the potential of attention weights as tools to guide experts in understanding which disease-relevant EEG features could be discriminative of SCD and MCI.
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Hata M, Miyazaki Y, Mori K, Yoshiyama K, Akamine S, Kanemoto H, Gotoh S, Omori H, Hirashima A, Satake Y, Suehiro T, Takahashi S, Ikeda M. Utilizing portable electroencephalography to screen for pathology of Alzheimer's disease: a methodological advancement in diagnosis of neurodegenerative diseases. Front Psychiatry 2024; 15:1392158. [PMID: 38855641 PMCID: PMC11157607 DOI: 10.3389/fpsyt.2024.1392158] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 02/27/2024] [Accepted: 04/29/2024] [Indexed: 06/11/2024] Open
Abstract
Background The current biomarker-supported diagnosis of Alzheimer's disease (AD) is hindered by invasiveness and cost issues. This study aimed to address these challenges by utilizing portable electroencephalography (EEG). We propose a novel, non-invasive, and cost-effective method for identifying AD, using a sample of patients with biomarker-verified AD, to facilitate early and accessible disease screening. Methods This study included 35 patients with biomarker-verified AD, confirmed via cerebrospinal fluid sampling, and 35 age- and sex-balanced healthy volunteers (HVs). All participants underwent portable EEG recordings, focusing on 2-minute resting-state EEG epochs with closed eyes state. EEG recordings were transformed into scalogram images, which were analyzed using "vision Transformer(ViT)," a cutting-edge deep learning model, to differentiate patients from HVs. Results The application of ViT to the scalogram images derived from portable EEG data demonstrated a significant capability to distinguish between patients with biomarker-verified AD and HVs. The method achieved an accuracy of 73%, with an area under the receiver operating characteristic curve of 0.80, indicating robust performance in identifying AD pathology using neurophysiological measures. Conclusions Our findings highlight the potential of portable EEG combined with advanced deep learning techniques as a transformative tool for screening of biomarker-verified AD. This study not only contributes to the neurophysiological understanding of AD but also opens new avenues for the development of accessible and non-invasive diagnostic methods. The proposed approach paves the way for future clinical applications, offering a promising solution to the limitations of advanced diagnostic practices for dementia.
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Affiliation(s)
- Masahiro Hata
- Department of Psychiatry, Osaka University Graduate School of Medicine, Osaka, Japan
| | - Yuki Miyazaki
- Department of Psychiatry, Osaka University Graduate School of Medicine, Osaka, Japan
| | - Kohji Mori
- Department of Psychiatry, Osaka University Graduate School of Medicine, Osaka, Japan
| | - Kenji Yoshiyama
- Department of Psychiatry, Osaka University Graduate School of Medicine, Osaka, Japan
| | - Shoshin Akamine
- Department of Psychiatry, Osaka University Graduate School of Medicine, Osaka, Japan
| | - Hideki Kanemoto
- Department of Psychiatry, Osaka University Graduate School of Medicine, Osaka, Japan
| | - Shiho Gotoh
- Department of Psychiatry, Osaka University Graduate School of Medicine, Osaka, Japan
| | - Hisaki Omori
- Department of Psychiatry, Osaka University Graduate School of Medicine, Osaka, Japan
- Department of Psychiatry, Esaka Hospital, Osaka, Japan
| | - Atsuya Hirashima
- Department of Psychiatry, Osaka University Graduate School of Medicine, Osaka, Japan
- Department of Psychiatry, Esaka Hospital, Osaka, Japan
| | - Yuto Satake
- Department of Psychiatry, Osaka University Graduate School of Medicine, Osaka, Japan
| | - Takashi Suehiro
- Department of Psychiatry, Osaka University Graduate School of Medicine, Osaka, Japan
| | - Shun Takahashi
- Department of Psychiatry, Osaka University Graduate School of Medicine, Osaka, Japan
- Department of Occupational Therapy, Graduate School of Rehabilitation Science, Osaka Metropolitan University, Osaka, Japan
- Clinical Research and Education Center, Asakayama General Hospital, Osaka, Japan
- Department of Neuropsychiatry, Wakayama Medical University, Wakayama, Japan
| | - Manabu Ikeda
- Department of Psychiatry, Osaka University Graduate School of Medicine, Osaka, Japan
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Mehmood A, Shahid F, Khan R, Ibrahim MM, Zheng Z. Utilizing Siamese 4D-AlzNet and Transfer Learning to Identify Stages of Alzheimer's Disease. Neuroscience 2024; 545:69-85. [PMID: 38492797 DOI: 10.1016/j.neuroscience.2024.03.007] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/18/2023] [Revised: 03/05/2024] [Accepted: 03/10/2024] [Indexed: 03/18/2024]
Abstract
Alzheimer's disease (AD) is the general form of dementia, leading to a progressive neurological disorder characterized by memory loss due to brain cell damage. Artificial Intelligence (AI) assists in the early identification and prediction of AD patients, determining future risks and benefits for radiologists and doctors to save time and cost. Since deep learning (DL) approaches work well with massive datasets and have recently become helpful for AD detection, there remains an area for improvement in automating detection performance. Present approaches somehow addressed the challenges of limited annotated data samples for binary classification. This contrasts with prior state-of-the-art techniques, which were constrained by their incapacity to capture abstract-level information. In this paper, we proposed a Siamese 4D-AlzNet model comprised of four parallel convolutional neural network (CNN) streams (Five CNN layer blocks) and customized transfer learning models (Frozen VGG-19, Frozen VGG-16, and customized AlexNet). Siamese 4D-AlzNet was vertically and horizontally stored, and the spatial features were passed to the final layer for classification. For experiments, T1-weighted MRI images comprised of four distinct subject classes, normal control (NC), mild cognitive impairment (MCI), late mild cognitive impairment (LMCI), and AD, have been employed. Our proposed models achieved outstanding accuracy, with a remarkable 95.05% accuracy distinguishing between normal and AD subjects. The performance across remaining binary class pairs consistently exceeded 90%. We thoroughly compared our model with the latest methods using the same dataset as our reference. Our proposed model improved NC-AD and MCI-AD classification accuracy by 2% 7%.
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Affiliation(s)
- Atif Mehmood
- School of Computer Science and Technology, Zhejiang Normal University, Jinhua 321004, China; Zhejiang Institute of Photoelectronics & Zhejiang Institute for Advanced Light Source, Zhejiang Normal University, Jinhua, Zhejiang 321004, China
| | - Farah Shahid
- School of Computer Science and Technology, Zhejiang Normal University, Jinhua 321004, China; Zhejiang Institute of Photoelectronics & Zhejiang Institute for Advanced Light Source, Zhejiang Normal University, Jinhua, Zhejiang 321004, China.
| | - Rizwan Khan
- School of Computer Science and Technology, Zhejiang Normal University, Jinhua 321004, China
| | - Mostafa M Ibrahim
- Department of Electrical Engineering, Faculty of Engineering, Minia University, Minia 61519, Egypt
| | - Zhonglong Zheng
- School of Computer Science and Technology, Zhejiang Normal University, Jinhua 321004, China.
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12
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Brookshire G, Kasper J, Blauch NM, Wu YC, Glatt R, Merrill DA, Gerrol S, Yoder KJ, Quirk C, Lucero C. Data leakage in deep learning studies of translational EEG. Front Neurosci 2024; 18:1373515. [PMID: 38765672 PMCID: PMC11099244 DOI: 10.3389/fnins.2024.1373515] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/19/2024] [Accepted: 04/04/2024] [Indexed: 05/22/2024] Open
Abstract
A growing number of studies apply deep neural networks (DNNs) to recordings of human electroencephalography (EEG) to identify a range of disorders. In many studies, EEG recordings are split into segments, and each segment is randomly assigned to the training or test set. As a consequence, data from individual subjects appears in both the training and the test set. Could high test-set accuracy reflect data leakage from subject-specific patterns in the data, rather than patterns that identify a disease? We address this question by testing the performance of DNN classifiers using segment-based holdout (in which segments from one subject can appear in both the training and test set), and comparing this to their performance using subject-based holdout (where all segments from one subject appear exclusively in either the training set or the test set). In two datasets (one classifying Alzheimer's disease, and the other classifying epileptic seizures), we find that performance on previously-unseen subjects is strongly overestimated when models are trained using segment-based holdout. Finally, we survey the literature and find that the majority of translational DNN-EEG studies use segment-based holdout. Most published DNN-EEG studies may dramatically overestimate their classification performance on new subjects.
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Affiliation(s)
| | - Jake Kasper
- SPARK Neuro Inc., New York, NY, United States
| | - Nicholas M. Blauch
- SPARK Neuro Inc., New York, NY, United States
- Neuroscience Institute, Carnegie Mellon University, Pittsburgh, PA, United States
| | | | - Ryan Glatt
- Pacific Brain Health Center, Pacific Neuroscience Institute and Foundation, Santa Monica, CA, United States
| | - David A. Merrill
- Pacific Brain Health Center, Pacific Neuroscience Institute and Foundation, Santa Monica, CA, United States
- Saint John's Cancer Institute at Providence Saint John's Health Center, Santa Monica, CA, United States
- Psychiatry and Biobehavioral Sciences, Semel Institute for Neuroscience and Human Behavior, David Geffen School of Medicine at University of California, Los Angeles, Los Angeles, CA, United States
| | | | | | - Colin Quirk
- SPARK Neuro Inc., New York, NY, United States
| | - Ché Lucero
- SPARK Neuro Inc., New York, NY, United States
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Zhou H, Yin L, Su R, Zhang Y, Yuan Y, Xie P, Li X. STCGRU: A hybrid model based on CNN and BiGRU for mild cognitive impairment diagnosis. COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE 2024; 248:108123. [PMID: 38471292 DOI: 10.1016/j.cmpb.2024.108123] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/19/2023] [Revised: 11/28/2023] [Accepted: 03/07/2024] [Indexed: 03/14/2024]
Abstract
BACKGROUND AND OBJECTIVE Early diagnosis of mild cognitive impairment (MCI) is one of the essential measures to prevent its further development into Alzheimer's disease (AD). In this paper, we propose a hybrid deep learning model for early diagnosis of MCI, called spatio-temporal convolutional gated recurrent unit network (STCGRU). METHODS The STCGRU comprises three bespoke convolutional neural network (CNN) modules and a bi-directional gated recurrent unit (BiGRU) module, which can effectively extract the spatial and temporal features of EEG and obtain excellent diagnostic results. We use a publicly available EEG dataset that has not undergone pre-processing to verify the robustness and accuracy of the model. Ablation experiments on STCGRU are conducted to showcase the individual performance improvement of each module. RESULTS Compared with other state-of-the-art approaches using the same publicly available EEG dataset, the results show that STCGRU is more suitable for early diagnosis of MCI. After 10-fold cross-validation, the average classification accuracy of the hybrid model reached 99.95 %, while the average kappa value reached 0.9989. CONCLUSIONS The experimental results show that the hybrid model proposed in this paper can directly extract compelling spatio-temporal features from the raw EEG data for classification. The STCGRU allows for accurate diagnosis of patients with MCI and has a high practical value.
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Affiliation(s)
- Hao Zhou
- Key Laboratory of Measurement Technology and Instrumentation of Hebei Province, Institute of Electric Engineering, Yanshan University, Qinhuangdao, PR China
| | - Liyong Yin
- The First Hospital of Qinhuangdao, Qinhuangdao, PR China
| | - Rui Su
- Hebei Medical University, Shijiazhuang, PR China
| | - Ying Zhang
- Key Laboratory of Measurement Technology and Instrumentation of Hebei Province, Institute of Electric Engineering, Yanshan University, Qinhuangdao, PR China
| | - Yi Yuan
- Key Laboratory of Measurement Technology and Instrumentation of Hebei Province, Institute of Electric Engineering, Yanshan University, Qinhuangdao, PR China
| | - Ping Xie
- Key Laboratory of Measurement Technology and Instrumentation of Hebei Province, Institute of Electric Engineering, Yanshan University, Qinhuangdao, PR China
| | - Xin Li
- Key Laboratory of Measurement Technology and Instrumentation of Hebei Province, Institute of Electric Engineering, Yanshan University, Qinhuangdao, PR China.
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Kim SK, Kim H, Kim SH, Kim JB, Kim L. Electroencephalography-based classification of Alzheimer's disease spectrum during computer-based cognitive testing. Sci Rep 2024; 14:5252. [PMID: 38438453 PMCID: PMC10912091 DOI: 10.1038/s41598-024-55656-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2023] [Accepted: 02/26/2024] [Indexed: 03/06/2024] Open
Abstract
Alzheimer's disease (AD) is a progressive disease leading to cognitive decline, and to prevent it, researchers seek to diagnose mild cognitive impairment (MCI) early. Particularly, non-amnestic MCI (naMCI) is often mistaken for normal aging as the representative symptom of AD, memory decline, is absent. Subjective cognitive decline (SCD), an intermediate step between normal aging and MCI, is crucial for prediction or early detection of MCI, which determines the presence of AD spectrum pathology. We developed a computer-based cognitive task to classify the presence or absence of AD pathology and stage within the AD spectrum, and attempted to perform multi-stage classification through electroencephalography (EEG) during resting and memory encoding state. The resting and memory-encoding states of 58 patients (20 with SCD, 10 with naMCI, 18 with aMCI, and 10 with AD) were measured and classified into four groups. We extracted features that could reflect the phase, spectral, and temporal characteristics of the resting and memory-encoding states. For the classification, we compared nine machine learning models and three deep learning models using Leave-one-subject-out strategy. Significant correlations were found between the existing neurophysiological test scores and performance of our computer-based cognitive task for all cognitive domains. In all models used, the memory-encoding states realized a higher classification performance than resting states. The best model for the 4-class classification was cKNN. The highest accuracy using resting state data was 67.24%, while it was 93.10% using memory encoding state data. This study involving participants with SCD, naMCI, aMCI, and AD focused on early Alzheimer's diagnosis. The research used EEG data during resting and memory encoding states to classify these groups, demonstrating the significance of cognitive process-related brain waves for diagnosis. The computer-based cognitive task introduced in the study offers a time-efficient alternative to traditional neuropsychological tests, showing a strong correlation with their results and serving as a valuable tool to assess cognitive impairment with reduced bias.
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Affiliation(s)
- Seul-Kee Kim
- Bionics Research Center, Korea Institute of Science and Technology, Seoul, Republic of Korea
- Department of Brain and Cognitive Engineering, Korea University, Seoul, Republic of Korea
| | - Hayom Kim
- Department of Neurology, Korea University Anam Hospital, Korea University College of Medicine, Seoul, Republic of Korea
| | - Sang Hee Kim
- Department of Brain and Cognitive Engineering, Korea University, Seoul, Republic of Korea
| | - Jung Bin Kim
- Department of Neurology, Korea University Anam Hospital, Korea University College of Medicine, Seoul, Republic of Korea.
| | - Laehyun Kim
- Bionics Research Center, Korea Institute of Science and Technology, Seoul, Republic of Korea.
- Department of HY-KIST Bio-Convergence, Hanyang University, Seoul, Republic of Korea.
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15
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Şeker M, Özerdem MS. Deep insights into MCI diagnosis: A comparative deep learning analysis of EEG time series. J Neurosci Methods 2024; 403:110057. [PMID: 38215948 DOI: 10.1016/j.jneumeth.2024.110057] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/23/2023] [Revised: 12/25/2023] [Accepted: 01/05/2024] [Indexed: 01/14/2024]
Abstract
BACKGROUND Individuals in the early stages of Alzheimer's Disease (AD) are typically diagnosed with Mild Cognitive Impairment (MCI). MCI represents a transitional phase between normal cognitive function and AD. Electroencephalography (EEG) records carry valuable insights into cerebral cortex brain activities to analyze neuronal degeneration. To enhance the precision of dementia diagnosis, automatic and intelligent methods are required for the analysis and processing of EEG signals. NEW METHODS This paper aims to address the challenges associated with MCI diagnosis by leveraging EEG signals and deep learning techniques. The analysis in this study focuses on processing the information embedded within the sequence of raw EEG time series data. EEG recordings are collected from 10 Healthy Controls (HC) and 10 MCI participants using 19 electrodes during a 30 min eyes-closed session. EEG time series are transformed into 2 separate formats of input tensors and applied to deep neural network architectures. Convolutional Neural Network (CNN) and ResNet from scratch are performed with 2D time series with different segment lengths. Furthermore, EEGNet and DeepConvNet architectures are utilized for 1D time series. RESULTS ResNet demonstrates superior effectiveness in detecting MCI when compared to CNN architecture. Complete discrimination is achieved using EEGNet and DeepConvNet for noisy segments. COMPARISON WITH EXISTING METHODS ResNet has yielded a 3 % higher accuracy rate compared to CNN. None of the architectures in the literature have achieved 100 % accuracy except proposed EEGNet and DeepConvnet. CONCLUSION Deep learning architectures hold great promise in enhancing the accuracy of early MCI detection.
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Affiliation(s)
- Mesut Şeker
- Department of Electrical and Electronics Engineering, Dicle University, Diyarbakir, Turkey.
| | - Mehmet Siraç Özerdem
- Department of Electrical and Electronics Engineering, Dicle University, Diyarbakir, Turkey.
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16
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Easwaran K, Ramakrishnan K, Jeyabal SN. Classification of cognitive impairment using electroencephalography for clinical inspection. Proc Inst Mech Eng H 2024; 238:358-371. [PMID: 38366360 DOI: 10.1177/09544119241228912] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/18/2024]
Abstract
Impairment in cognitive skill though set-in due to various diseases, its progress is based on neuronal degeneration. In general, cognitive impairment (CI) is divided into three stages: mild, moderate and severe. Quantification of CI is important for deciding/changing therapy. Attempted in this work is to quantify electroencephalograph (EEG) signal and group it into four classes (controls and three stages of CI). After acquiring resting state EEG signal from the participants, non-local and local synchrony measures are derived from phase amplitude coupling and phase locking value. This totals to 160 features per individual for each task. Two types of classification networks are constructed. The first one is an artificial neural network (ANN) that takes derived features and gives a maximum accuracy of 85.11%. The second network is convolutional neural network (CNN) for which topographical images constructed from EEG features becomes the input dataset. The network is trained with 60% of data and then tested with remaining 40% of data. This process is performed in 5-fold technique, which yields an average accuracy of 94.75% with only 30 numbers of inputs for every individual. The result of the study shows that CNN outperforms ANN with a relatively lesser number of inputs. From this it can be concluded that this method proposes a simple task for acquiring EEG (which can be done by CI subjects) and quantifies CI stages with no overlapping between control and test group, thus making it possible for identifying early symptoms of CI.
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Affiliation(s)
- Karuppathal Easwaran
- Department of Biomedical Engineering, Rajalakshmi Engineering College, Chennai, Tamil Nadu, India
| | - Kalpana Ramakrishnan
- Department of Biomedical Engineering, Rajalakshmi Engineering College, Chennai, Tamil Nadu, India
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17
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Rani TJ, Kavitha D. Effective Epileptic Seizure Detection Using Enhanced Salp Swarm Algorithm-based Long Short-Term Memory Network. IETE JOURNAL OF RESEARCH 2024; 70:1538-1555. [DOI: 10.1080/03772063.2022.2153090] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/04/2025]
Affiliation(s)
- T. Jhansi Rani
- Department of Computer Science & Engineering, Jawaharlal Nehru Technological University, Anantapur, Andhra Pradesh, India
| | - D. Kavitha
- Department of Computer Science & Engineering, G. Pulla Reddy Engineering College (Autonomous), Kurnool, Andhra Pradesh, India
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18
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Almohammadi A, Wang YK. Revealing brain connectivity: graph embeddings for EEG representation learning and comparative analysis of structural and functional connectivity. Front Neurosci 2024; 17:1288433. [PMID: 38264495 PMCID: PMC10804888 DOI: 10.3389/fnins.2023.1288433] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/04/2023] [Accepted: 12/04/2023] [Indexed: 01/25/2024] Open
Abstract
This study employs deep learning techniques to present a compelling approach for modeling brain connectivity in EEG motor imagery classification through graph embedding. The compelling aspect of this study lies in its combination of graph embedding, deep learning, and different brain connectivity types, which not only enhances classification accuracy but also enriches the understanding of brain function. The approach yields high accuracy, providing valuable insights into brain connections and has potential applications in understanding neurological conditions. The proposed models consist of two distinct graph-based convolutional neural networks, each leveraging different types of brain connectivities to enhance classification performance and gain a deeper understanding of brain connections. The first model, Adjacency-based Convolutional Neural Network Model (Adj-CNNM), utilizes a graph representation based on structural brain connectivity to embed spatial information, distinguishing it from prior spatial filtering approaches dependent on subjects and tasks. Extensive tests on a benchmark dataset-IV-2a demonstrate that an accuracy of 72.77% is achieved by the Adj-CNNM, surpassing baseline and state-of-the-art methods. The second model, Phase Locking Value Convolutional Neural Network Model (PLV-CNNM), incorporates functional connectivity to overcome structural connectivity limitations and identifies connections between distinct brain regions. The PLV-CNNM achieves an overall accuracy of 75.10% across the 1-51 Hz frequency range. In the preferred 8-30 Hz frequency band, known for motor imagery data classification (including α, μ, and β waves), individual accuracies of 91.9%, 90.2%, and 85.8% are attained for α, μ, and β, respectively. Moreover, the model performs admirably with 84.3% accuracy when considering the entire 8-30 Hz band. Notably, the PLV-CNNM reveals robust connections between different brain regions during motor imagery tasks, including the frontal and central cortex and the central and parietal cortex. These findings provide valuable insights into brain connectivity patterns, enriching the comprehension of brain function. Additionally, the study offers a comprehensive comparative analysis of diverse brain connectivity modeling methods.
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Affiliation(s)
- Abdullah Almohammadi
- School of Computer Science, Faculty of Engineering and Information Technology, University of Technology Sydney, Sydney, NSW, Australia
- College of Computer Science and Engineering, Taibah University, Madinah, Saudia Arabia
| | - Yu-Kai Wang
- School of Computer Science, Faculty of Engineering and Information Technology, University of Technology Sydney, Sydney, NSW, Australia
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19
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Zhang B, Wei D, Yan G, Li X, Su Y, Cai H. Spatial-Temporal EEG Fusion Based on Neural Network for Major Depressive Disorder Detection. Interdiscip Sci 2023; 15:542-559. [PMID: 37140772 PMCID: PMC10158716 DOI: 10.1007/s12539-023-00567-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/08/2023] [Revised: 04/12/2023] [Accepted: 04/13/2023] [Indexed: 05/05/2023]
Abstract
In view of the major depressive disorder characteristics such as high mortality as well as high recurrence, it is important to explore an objective and effective detection method for major depressive disorder. Considering the advantages complementary of different machine learning algorithms in information mining process, as well as the fusion complementary of different information, in this study, the spatial-temporal electroencephalography fusion framework using neural network is proposed for major depressive disorder detection. Since electroencephalography is a typical time series signal, we introduce recurrent neural network embedded in long short-term memory unit for extract temporal domain features to solve the problem of long-distance information dependence. To reduce the volume conductor effect, the temporal electroencephalography data are mapping into a spatial brain functional network using phase lag index, then the spatial domain features were extracted from brain functional network using 2D convolutional neural networks. Considering the complementarity between different types of features, the spatial-temporal electroencephalography features are fused to achieve data diversity. The experimental results show that spatial-temporal features fusion can improve the detection accuracy of major depressive disorder with a highest of 96.33%. In addition, our research also found that theta, alpha, and full frequency band in brain regions of left frontal, left central, right temporal are closely related to MDD detection, especially theta frequency band in left frontal region. Only using single-dimension EEG data as decision basis, it is difficult to fully explore the valuable information hidden in the data, which affects the overall detection performance of MDD. Meanwhile, different algorithms have their own advantages for different application scenarios. Ideally, different algorithms should use their respective advantages to jointly address complex problems in engineering fields. To this end, we propose a computer-aided MDD detection framework based on spatial-temporal EEG fusion using neural network, as shown in Fig. 1. The simplified process is as follows: (1) Raw EEG data acquisition and preprocessing. (2) The time series EEG data of each channel are input as recurrent neural network (RNN), and RNN is used to process and extract temporal domain (TD) features. (3) The BFN among different EEG channels is constructed, and CNN is used to process and extract the spatial domain (SD) features of the BFN. (4) Based on the theory of information complementarity, the spatial-temporal information is fused to realize efficient MDD detection. Fig. 1 MDD detection framework based on spatial-temporal EEG fusion.
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Affiliation(s)
- Bingtao Zhang
- School of Electronic and Information Engineering, Lanzhou Jiaotong University, Lanzhou, 730070, China.
- Key Laboratory of Opto-Technology and Intelligent Control Ministry of Education, Lanzhou Jiaotong University, Lanzhou, 730070, China.
- School of Information Science and Engineering, Lanzhou University, Lanzhou, 730000, China.
| | - Dan Wei
- School of Electronic and Information Engineering, Lanzhou Jiaotong University, Lanzhou, 730070, China
| | - Guanghui Yan
- School of Electronic and Information Engineering, Lanzhou Jiaotong University, Lanzhou, 730070, China
| | - Xiulan Li
- Gansu Province Big Data Center, Lanzhou, 730000, China.
| | - Yun Su
- School of Information Science and Engineering, Lanzhou University, Lanzhou, 730000, China
- College of Computer Science and Engineering, Northwest Normal University, Lanzhou, 730070, China
| | - Hanshu Cai
- School of Information Science and Engineering, Lanzhou University, Lanzhou, 730000, China
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20
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Shanmugavadivel K, Sathishkumar VE, Cho J, Subramanian M. Advancements in computer-assisted diagnosis of Alzheimer's disease: A comprehensive survey of neuroimaging methods and AI techniques for early detection. Ageing Res Rev 2023; 91:102072. [PMID: 37709055 DOI: 10.1016/j.arr.2023.102072] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/27/2023] [Revised: 09/05/2023] [Accepted: 09/10/2023] [Indexed: 09/16/2023]
Abstract
Alzheimer's Disease (AD) is a brain disorder that causes the brain to shrink and eventually causes brain cells to die. This neurological condition progressively hampers cognitive and memory functions, along with the ability to carry out fundamental tasks over time. From the symptoms it is very difficult to detect during its early stage. It has become necessary to develop a computer assisted diagnostic models for the early AD detection. This survey work, discussed about a review of 110 published AD detection methods and techniques from the year 2011 to till-date. This study lies in its comprehensive exploration of AD detection methods using a range of artificial intelligence (AI) techniques and neuroimaging modalities. By collecting and analysing 50 papers related to AD diagnosis datasets, the study provides a comprehensive understanding of the diversity of input types, subjects, and classes used in AD research. Summarizing 60 papers on methodologies gives researchers a succinct overview of various approaches that contribute to enhancing detection accuracy. From the review, data are acquired and pre-processed form multiple modalities of neuroimaging. This paper mainly focused on review of different datasets used, various feature extraction methods, parameters used in neuro images. To diagnosis the Alzheimer's disease, the existing methods utilized three most common artificial intelligence techniques such as machine learning, deep learning, and transfer learning. We conclude this survey work by providing future perspectives for AD diagnosis at early stage.
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Affiliation(s)
| | - V E Sathishkumar
- Department of Software Engineering, Jeonbuk National University, Jeonju-si, Jeollabuk-do 54896, Republic of Korea
| | - Jaehyuk Cho
- Department of Software Engineering, Jeonbuk National University, Jeonju-si, Jeollabuk-do 54896, Republic of Korea.
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21
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Klepl D, He F, Wu M, Blackburn DJ, Sarrigiannis P. Adaptive Gated Graph Convolutional Network for Explainable Diagnosis of Alzheimer's Disease Using EEG Data. IEEE Trans Neural Syst Rehabil Eng 2023; 31:3978-3987. [PMID: 37792656 DOI: 10.1109/tnsre.2023.3321634] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/06/2023]
Abstract
Graph neural network (GNN) models are increasingly being used for the classification of electroencephalography (EEG) data. However, GNN-based diagnosis of neurological disorders, such as Alzheimer's disease (AD), remains a relatively unexplored area of research. Previous studies have relied on functional connectivity methods to infer brain graph structures and used simple GNN architectures for the diagnosis of AD. In this work, we propose a novel adaptive gated graph convolutional network (AGGCN) that can provide explainable predictions. AGGCN adaptively learns graph structures by combining convolution-based node feature enhancement with a correlation-based measure of power spectral density similarity. Furthermore, the gated graph convolution can dynamically weigh the contribution of various spatial scales. The proposed model achieves high accuracy in both eyes-closed and eyes-open conditions, indicating the stability of learned representations. Finally, we demonstrate that the proposed AGGCN model generates consistent explanations of its predictions that might be relevant for further study of AD-related alterations of brain networks.
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Parsa M, Rad HY, Vaezi H, Hossein-Zadeh GA, Setarehdan SK, Rostami R, Rostami H, Vahabie AH. EEG-based classification of individuals with neuropsychiatric disorders using deep neural networks: A systematic review of current status and future directions. COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE 2023; 240:107683. [PMID: 37406421 DOI: 10.1016/j.cmpb.2023.107683] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/05/2022] [Revised: 05/23/2023] [Accepted: 06/18/2023] [Indexed: 07/07/2023]
Abstract
The use of deep neural networks for electroencephalogram (EEG) classification has rapidly progressed and gained popularity in recent years, but automatic feature extraction from EEG signals remains a challenging task. The classification of neuropsychiatric disorders demands the extraction of neuro-markers for use in automated EEG classification. Numerous advanced deep learning algorithms can be used for this purpose. In this article, we present a comprehensive review of the main factors and parameters that affect the performance of deep neural networks in classifying different neuropsychiatric disorders using EEG signals. We also analyze the EEG features used for improving classification performance. Our analysis includes 82 scientific journal papers that applied deep neural networks for subject-wise classification based on EEG signals. We extracted information on the EEG dataset and types of disorders, deep neural network structures, performance, and hyperparameters. The results show that most studies have focused on clinical classification, achieving an average accuracy of 91.83 ± 7.34, with convolutional neural networks (CNNs) being the most frequently used network architecture and resting-state EEG signals being the most commonly used data type. Additionally, the review reveals that depression (N = 18), Alzheimer's (N = 11), and schizophrenia (N = 11) were studied more frequently than other types of neuropsychiatric disorders. Our review provides insight into the performance of deep neural networks in EEG classification and highlights the importance of EEG feature extraction in improving classification accuracy. By identifying the main factors and parameters that affect deep neural network performance in EEG classification, our review can guide future research in this area. We hope that our findings will encourage further exploration of deep learning methods for EEG classification and contribute to the development of more accurate and effective methods for diagnosing and monitoring neuropsychiatric disorders using EEG signals.
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Affiliation(s)
- Mohsen Parsa
- School of Electrical and Computer Engineering, College of Engineering, University of Tehran, North Kargar St., P.O. Box 14395/515, Tehran, Iran; School of Cognitive Sciences, Institute for Research in Fundamental Sciences, Artesh Highway, P.O. Box 19568-36484, Tehran, Iran
| | - Habib Yousefi Rad
- School of Electrical and Computer Engineering, College of Engineering, University of Tehran, North Kargar St., P.O. Box 14395/515, Tehran, Iran; School of Cognitive Sciences, Institute for Research in Fundamental Sciences, Artesh Highway, P.O. Box 19568-36484, Tehran, Iran
| | - Hadi Vaezi
- School of Electrical and Computer Engineering, College of Engineering, University of Tehran, North Kargar St., P.O. Box 14395/515, Tehran, Iran; School of Cognitive Sciences, Institute for Research in Fundamental Sciences, Artesh Highway, P.O. Box 19568-36484, Tehran, Iran
| | - Gholam-Ali Hossein-Zadeh
- Control and Intelligent Processing Center of Excellence, Faculty of Electrical and Computer Engineering, University of Tehran, North Kargar St., P.O. Box 14395/515, Tehran, Iran
| | - Seyed Kamaledin Setarehdan
- Control and Intelligent Processing Center of Excellence, Faculty of Electrical and Computer Engineering, University of Tehran, North Kargar St., P.O. Box 14395/515, Tehran, Iran
| | - Reza Rostami
- Faculty of Psychology and Education, University of Tehran, Jalal-Al-e-Ahmed, P.O. Box 14155-6456, Tehran, Iran
| | - Hana Rostami
- ACNC, Atieh Clinical Neuroscience Center, Valiasr St., P.O. Box 19697-13663, Tehran, Iran
| | - Abdol-Hossein Vahabie
- Faculty of Psychology and Education, University of Tehran, Jalal-Al-e-Ahmed, P.O. Box 14155-6456, Tehran, Iran; Cognitive Systems Laboratory, Control and Intelligent Processing Center of Excellence (CIPCE), School of Electrical and Computer Engineering, College of Engineering, University of Tehran, P.O. Box 14395/515, Tehran, Iran; Pasargad Institute for Advanced Innovative Solutions (PIAIS), Tehran, Iran.
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Trinh TT, Liu YH, Wu CT, Peng WH, Hou CL, Weng CH, Lee CY. PLI-Based Connectivity in Resting-EEG is a Robust and Generalizable Feature for Detecting MCI and AD: A Validation on a Diverse Multisite Clinical Dataset. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2023; 2023:1-6. [PMID: 38083569 DOI: 10.1109/embc40787.2023.10340854] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/18/2023]
Abstract
The high prevalence rate of Alzheimer's disease (AD) and mild cognitive impairment (MCI) has been a serious public health threat to the modern society. Recently, many studies have demonstrated the potential of using non-invasive electroencephalography (EEG) and machine learning to assist the diagnosis of AD/MCI. However, the majority of these research recorded EEG signals from a single center, leading to significant concerns regarding the generalizability of the findings in clinical settings. The current study aims to reevaluate the effectiveness of EEG-based machine learning model for the detection of AD/MCI in the case of a relatively large and diverse data set. We collected resting-state EEG data from 150 participants across six hospitals and examined the classification performances of Linear Discriminative Analysis (LDA) classifiers on the phase lag index (PLI) feature. We also compared the performance of PLI over the other commonly-used EEG features and other classifiers. The model was first tested on a training set to select the feature subset and then further validated with an independent test set. The results demonstrate that PLI performs the best compared to other features. The LDA classifier trained with the optimal PLI features can provide 82.50% leave-one-participant-out cross-validation (LOPO-CV) accuracy on the training set and maintain a good enough performance with 75.00% accuracy on the test set. Our results suggest that PLI-based functional connectivity could be considered as a reliable bio-maker to detect AD/MCI in the real-world clinical settings.
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Zhang J, Xia J, Liu X, Olichney J. Machine Learning on Visibility Graph Features Discriminates the Cognitive Event-Related Potentials of Patients with Early Alzheimer's Disease from Healthy Aging. Brain Sci 2023; 13:770. [PMID: 37239242 PMCID: PMC10216358 DOI: 10.3390/brainsci13050770] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/20/2023] [Revised: 05/02/2023] [Accepted: 05/04/2023] [Indexed: 05/28/2023] Open
Abstract
We present a framework for electroencephalography (EEG)-based classification between patients with Alzheimer's Disease (AD) and robust normal elderly (RNE) via a graph theory approach using visibility graphs (VGs). This EEG VG approach is motivated by research that has demonstrated differences between patients with early stage AD and RNE using various features of EEG oscillations or cognitive event-related potentials (ERPs). In the present study, EEG signals recorded during a word repetition experiment were wavelet decomposed into 5 sub-bands (δ,θ,α,β,γ). The raw and band-specific signals were then converted to VGs for analysis. Twelve graph features were tested for differences between the AD and RNE groups, and t-tests employed for feature selection. The selected features were then tested for classification using traditional machine learning and deep learning algorithms, achieving a classification accuracy of 100% with linear and non-linear classifiers. We further demonstrated that the same features can be generalized to the classification of mild cognitive impairment (MCI) converters, i.e., prodromal AD, against RNE with a maximum accuracy of 92.5%. Code is released online to allow others to test and reuse this framework.
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Affiliation(s)
- Jesse Zhang
- Computer Science Department, University of Southern California, Los Angeles, CA 90089, USA;
| | - Jiangyi Xia
- UC Davis Center for Mind and Brain, Davis, CA 95618, USA;
| | - Xin Liu
- UC Davis Computer Science Department, Davis, CA 95616, USA;
| | - John Olichney
- UC Davis Center for Mind and Brain, Davis, CA 95618, USA;
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Xia W, Zhang R, Zhang X, Usman M. A novel method for diagnosing Alzheimer's disease using deep pyramid CNN based on EEG signals. Heliyon 2023; 9:e14858. [PMID: 37025794 PMCID: PMC10070085 DOI: 10.1016/j.heliyon.2023.e14858] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/06/2022] [Revised: 03/07/2023] [Accepted: 03/20/2023] [Indexed: 03/28/2023] Open
Abstract
Background The diagnosis of Alzheimer's disease (AD) using electroencephalography (EEG) has garnered more attention recently. New methods In this paper, we present a novel approach for the diagnosis of AD, in terms of classifying the resting-state EEG of AD, mild cognitive impairment (MCI), and healthy control (HC). To overcome the hurdles of limited data available and the over-fitting problem of the deep learning models, we studied overlapping sliding windows to augment the one-dimensional EEG data of 100 subjects (including 49 AD subjects, 37 MCI subjects and 14 HC subjects). After constructing the appropriate dataset, the modified DPCNN was used to classify the augmented EEG. Furthermore, the model performance was evaluated by 5 times of 5-fold cross-validation and the confusion matrix has been obtained. Results The average accuracy rate of the model for classifying AD, MCI, and HC is 97.10%, and the F1 score of the three-class classification model is 97.11%, which further proves the model's excellent performance. Conclusions Therefore, the DPCNN proposed in this paper can accurately classify the one-dimensional EEG of AD and is worthy of reference for the diagnosis of the disease.
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Kim MJ, Youn YC, Paik J. Deep learning-based EEG analysis to classify normal, mild cognitive impairment, and dementia: algorithms and dataset. Neuroimage 2023; 272:120054. [PMID: 36997138 DOI: 10.1016/j.neuroimage.2023.120054] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/28/2022] [Revised: 03/17/2023] [Accepted: 03/24/2023] [Indexed: 03/31/2023] Open
Abstract
For automatic EEG diagnosis, this paper presents a new EEG data set with well-organized clinical annotations called Chung-Ang University Hospital EEG (CAUEEG), which has event history, patient's age, and corresponding diagnosis labels. We also designed two reliable evaluation tasks for the low-cost, non-invasive diagnosis to detect brain disorders: i) CAUEEG-Dementia with normal, mci, and dementia diagnostic labels and ii) CAUEEG-Abnormal with normal and abnormal. Based on the CAUEEG dataset, this paper proposes a new fully end-to-end deep learning model, called the CAUEEG End-to-end Deep neural Network (CEEDNet). CEEDNet pursues to bring all the functional elements for the EEG analysis in a seamless learnable fashion while restraining non-essential human intervention. Extensive experiments showed that our CEEDNet significantly improves the accuracy compared with existing methods, such as machine learning methods and Ieracitano-CNN (Ieracitano et al., 2019), due to taking full advantage of end-to-end learning. The high ROC-AUC scores of 0.9 on CAUEEG-Dementia and 0.86 on CAUEEG-Abnormal recorded by our CEEDNet models demonstrate that our method can lead potential patients to early diagnosis through automatic screening.
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Sadegh-Zadeh SA, Fakhri E, Bahrami M, Bagheri E, Khamsehashari R, Noroozian M, Hajiyavand AM. An Approach toward Artificial Intelligence Alzheimer's Disease Diagnosis Using Brain Signals. Diagnostics (Basel) 2023; 13:diagnostics13030477. [PMID: 36766582 PMCID: PMC9913919 DOI: 10.3390/diagnostics13030477] [Citation(s) in RCA: 12] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/23/2022] [Revised: 01/23/2023] [Accepted: 01/23/2023] [Indexed: 01/31/2023] Open
Abstract
BACKGROUND Electroencephalography (EEG) signal analysis is a rapid, low-cost, and practical method for diagnosing the early stages of dementia, including mild cognitive impairment (MCI) and Alzheimer's disease (AD). The extraction of appropriate biomarkers to assess a subject's cognitive impairment has attracted a lot of attention in recent years. The aberrant progression of AD leads to cortical detachment. Due to the interaction of several brain areas, these disconnections may show up as abnormalities in functional connectivity and complicated behaviors. METHODS This work suggests a novel method for differentiating between AD, MCI, and HC in two-class and three-class classifications based on EEG signals. To solve the class imbalance, we employ EEG data augmentation techniques, such as repeating minority classes using variational autoencoders (VAEs), as well as traditional noise-addition methods and hybrid approaches. The power spectrum density (PSD) and temporal data employed in this study's feature extraction from EEG signals were combined, and a support vector machine (SVM) classifier was used to distinguish between three categories of problems. RESULTS Insufficient data and unbalanced datasets are two common problems in AD datasets. This study has shown that it is possible to generate comparable data using noise addition and VAE, train the model using these data, and, to some extent, overcome the aforementioned issues with an increase in classification accuracy of 2 to 7%. CONCLUSION In this work, using EEG data, we were able to successfully detect three classes: AD, MCI, and HC. In comparison to the pre-augmentation stage, the accuracy gained in the classification of the three classes increased by 3% when the VAE model added additional data. As a result, it is clear how useful EEG data augmentation methods are for classes with smaller sample numbers.
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Affiliation(s)
- Seyed-Ali Sadegh-Zadeh
- Department of Computing, School of Digital, Technologies and Arts, Staffordshire University, Stoke-on-Trent ST4 2DE, UK
- Correspondence: (S.-A.S.-Z.); (A.M.H.)
| | - Elham Fakhri
- Department of Computing, School of Digital, Technologies and Arts, Staffordshire University, Stoke-on-Trent ST4 2DE, UK
| | - Mahboobe Bahrami
- Behavioral Sciences Research Center, School of Medicine, Isfahan University of Medical Sciences, Isfahan 8174533871, Iran
| | - Elnaz Bagheri
- Department of Computing, School of Digital, Technologies and Arts, Staffordshire University, Stoke-on-Trent ST4 2DE, UK
| | | | - Maryam Noroozian
- Cognitive Neurology and Neuropsychiatry Division, Department of Psychiatry, Tehran University of Medical Sciences, Tehran 1416634793, Iran
| | - Amir M. Hajiyavand
- Department of Mechanical Engineering, School of Engineering, University of Birmingham, Birmingham B15 2SQ, UK
- Correspondence: (S.-A.S.-Z.); (A.M.H.)
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28
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Morabito FC, Ieracitano C, Mammone N. An explainable Artificial Intelligence approach to study MCI to AD conversion via HD-EEG processing. Clin EEG Neurosci 2023; 54:51-60. [PMID: 34889152 DOI: 10.1177/15500594211063662] [Citation(s) in RCA: 12] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
An explainable Artificial Intelligence (xAI) approach is proposed to longitudinally monitor subjects affected by Mild Cognitive Impairment (MCI) by using high-density electroencephalography (HD-EEG). To this end, a group of MCI patients was enrolled at IRCCS Centro Neurolesi Bonino Pulejo of Messina (Italy) within a follow-up protocol that included two evaluations steps: T0 (first evaluation) and T1 (three months later). At T1, four MCI patients converted to Alzheimer's Disease (AD) and were included in the analysis as the goal of this work was to use xAI to detect individual changes in EEGs possibly related to the degeneration from MCI to AD. The proposed methodology consists in mapping segments of HD-EEG into channel-frequency maps by means of the power spectral density. Such maps are used as input to a Convolutional Neural Network (CNN), trained to label the maps as "T0" (MCI state) or "T1" (AD state). Experimental results reported high intra-subject classification performance (accuracy rate up to 98.97% (95% confidence interval: 98.68-99.26)). Subsequently, the explainability of the proposed CNN is explored via a Grad-CAM approach. The procedure detected which EEG-channels (i.e., head region) and range of frequencies (i.e., sub-bands) were more active in the progression to AD. The xAI analysis showed that the main information is included in the delta sub-band and that, limited to the analyzed dataset, the highest relevant areas are: the left-temporal and central-frontal lobe for Sb01, the parietal lobe for Sb02, the left-frontal lobe for Sb03 and the left-frontotemporal region for Sb04.
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Affiliation(s)
- Francesco Carlo Morabito
- DICEAM, 19009University Mediterranea of Reggio Calabria, Via Graziella Feo di Vito, 89124, Reggio Calabria, Italy
| | - Cosimo Ieracitano
- DICEAM, 19009University Mediterranea of Reggio Calabria, Via Graziella Feo di Vito, 89124, Reggio Calabria, Italy
| | - Nadia Mammone
- DICEAM, 19009University Mediterranea of Reggio Calabria, Via Graziella Feo di Vito, 89124, Reggio Calabria, Italy
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29
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Jiang S, Chen W, Ren Z, Zhu H. EEG-based analysis for pilots' at-risk cognitive competency identification using RF-CNN algorithm. Front Neurosci 2023; 17:1172103. [PMID: 37152589 PMCID: PMC10160375 DOI: 10.3389/fnins.2023.1172103] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/23/2023] [Accepted: 04/03/2023] [Indexed: 05/09/2023] Open
Abstract
Cognitive competency is an essential complement to the existing ship pilot screening system that should be focused on. Situation awareness (SA), as the cognitive foundation of unsafe behaviors, is susceptible to influencing piloting performance. To address this issue, this paper develops an identification model based on random forest- convolutional neural network (RF-CNN) method for detecting at-risk cognitive competency (i.e., low SA level) using wearable EEG signal acquisition technology. In the poor visibility scene, the pilots' SA levels were correlated with EEG frequency metrics in frontal (F) and central (C) regions, including α/β (p = 0.071 < 0.1 in F and p = 0.042 < 0.05 in C), θ/(α + θ) (p = 0.048 < 0.05 in F and p = 0.026 < 0.05 in C) and (α + θ)/β (p = 0.046 < 0.05 in F and p = 0.012 < 0.05 in C), and then a total of 12 correlation features were obtained based on a 5 s sliding time window. Using the RF algorithm developed by principal component analysis (PCA) for further feature combination, these salient combinations are used as input sets to obtain the CNN algorithm with optimal parameters for identification. The comparative results of the proposed RF-CNN (accuracy is 84.8%) against individual RF (accuracy is 78.1%) and CNN (accuracy is 81.6%) methods demonstrate that the RF-CNN with feature optimization provides the best identification of at-risk cognitive competency (accuracy increases 6.7%). Overall, the results of this paper provide key technical support for the development of an adaptive evaluation system of pilots' cognitive competency based on intelligent technology, and lay the foundation and framework for monitoring the cognitive process and competency of ship piloting operation in China.
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Affiliation(s)
- Shaoqi Jiang
- College of Information Engineering, Jinhua Polytechnic, Jinhua, Zhejiang, China
- College of Environment and Engineering, Shanghai Maritime University, Shanghai, China
- *Correspondence: Shaoqi Jiang,
| | - Weijiong Chen
- College of Environment and Engineering, Shanghai Maritime University, Shanghai, China
- College of Merchant Marine, Shanghai Maritime University, Shanghai, China
| | - Zhenzhen Ren
- College of Merchant Marine, Shanghai Maritime University, Shanghai, China
| | - He Zhu
- College of Information Engineering, Jinhua Polytechnic, Jinhua, Zhejiang, China
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30
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Sholeyan AE, Rahatabad FN, Setarehdan SK. Designing an Automatic Sleep Staging System Using Deep Convolutional Neural Network Fed by Nonlinear Dynamic Transformation. J Med Biol Eng 2022. [DOI: 10.1007/s40846-022-00771-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
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31
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Wang C, Xu T, Yu W, Li T, Han H, Zhang M, Tao M. Early diagnosis of Alzheimer's disease and mild cognitive impairment based on electroencephalography: From the perspective of event related potentials and deep learning. Int J Psychophysiol 2022; 182:182-189. [DOI: 10.1016/j.ijpsycho.2022.10.010] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/29/2022] [Revised: 10/21/2022] [Accepted: 10/24/2022] [Indexed: 11/06/2022]
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32
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Lo Giudice M, Ferlazzo E, Mammone N, Gasparini S, Cianci V, Pascarella A, Mammì A, Mandic D, Morabito FC, Aguglia U. Convolutional Neural Network Classification of Rest EEG Signals among People with Epilepsy, Psychogenic Non Epileptic Seizures and Control Subjects. INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH 2022; 19:15733. [PMID: 36497808 PMCID: PMC9738351 DOI: 10.3390/ijerph192315733] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/31/2022] [Revised: 11/19/2022] [Accepted: 11/24/2022] [Indexed: 06/17/2023]
Abstract
Identifying subjects with epileptic seizures or psychogenic non-epileptic seizures from healthy subjects via interictal EEG analysis can be a very challenging issue. Indeed, at visual inspection, EEG can be normal in both cases. This paper proposes an automatic diagnosis approach based on deep learning to differentiate three classes: subjects with epileptic seizures (ES), subjects with non-epileptic psychogenic seizures (PNES) and control subjects (CS), analyzed by non-invasive low-density interictal scalp EEG recordings. The EEGs of 42 patients with new-onset ES, 42 patients with PNES video recorded and 19 patients with CS all with normal interictal EEG on visual inspection, were analyzed in the study; none of them was taking psychotropic drugs before registration. The processing pipeline applies empirical mode decomposition (EMD) to 5s EEG segments of 19 channels in order to extract enhanced features learned automatically from the customized convolutional neural network (CNN). The resulting CNN has been shown to perform well during classification, with an accuracy of 85.7%; these results encourage the use of deep processing systems to assist clinicians in difficult clinical settings.
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Affiliation(s)
- Michele Lo Giudice
- Department of Information Engineering, Infrastructure and Sustainable Energy (DIIES), University “Mediterranea” of Reggio Calabria, 89100 Reggio Calabria, Italy
- Department of Science Medical and Surgery, University of Catanzaro, 88100 Catanzaro, Italy
| | - Edoardo Ferlazzo
- Department of Science Medical and Surgery, University of Catanzaro, 88100 Catanzaro, Italy
- Regional Epilepsy Center, Great Metropolitan Hospital “Bianchi-Melacrino-Morelli” of Reggio Calabria, 89100 Reggio Calabria, Italy
| | - Nadia Mammone
- Department of Civil, Energy, Environmental and Material Engineering (DICEAM), University “Mediterranea” of Reggio Calabria, 89100 Reggio Calabria, Italy
| | - Sara Gasparini
- Department of Science Medical and Surgery, University of Catanzaro, 88100 Catanzaro, Italy
- Regional Epilepsy Center, Great Metropolitan Hospital “Bianchi-Melacrino-Morelli” of Reggio Calabria, 89100 Reggio Calabria, Italy
| | - Vittoria Cianci
- Regional Epilepsy Center, Great Metropolitan Hospital “Bianchi-Melacrino-Morelli” of Reggio Calabria, 89100 Reggio Calabria, Italy
| | - Angelo Pascarella
- Department of Science Medical and Surgery, University of Catanzaro, 88100 Catanzaro, Italy
| | - Anna Mammì
- Department of Science Medical and Surgery, University of Catanzaro, 88100 Catanzaro, Italy
| | - Danilo Mandic
- Department of Electrical and Electronic Engineering, Imperial College London, London SW7 2AZ, UK
| | - Francesco Carlo Morabito
- Department of Civil, Energy, Environmental and Material Engineering (DICEAM), University “Mediterranea” of Reggio Calabria, 89100 Reggio Calabria, Italy
| | - Umberto Aguglia
- Department of Science Medical and Surgery, University of Catanzaro, 88100 Catanzaro, Italy
- Regional Epilepsy Center, Great Metropolitan Hospital “Bianchi-Melacrino-Morelli” of Reggio Calabria, 89100 Reggio Calabria, Italy
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Classification System of National Music Rhythm Spectrogram Based on Biological Neural Network. COMPUTATIONAL INTELLIGENCE AND NEUROSCIENCE 2022; 2022:2047576. [PMID: 36275983 PMCID: PMC9581626 DOI: 10.1155/2022/2047576] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/01/2022] [Revised: 09/15/2022] [Accepted: 09/28/2022] [Indexed: 11/23/2022]
Abstract
National music is a treasure of Chinese traditional culture. It contains the cultural characteristics of various regions and reflects the core value of Chinese traditional culture. Classification technology classifies a large number of unorganized drama documents, which are not labeled, and to some extent, it helps folk music better enter the lives of ordinary people. Simulate folk music of different spectrum and record corresponding music audio under laboratory conditions Through Fourier transform and other methods, music audio is converted into spectrogram, and a total of 2608 two-dimensional spectrogram images are obtained as datasets. The sonogram dataset is imported into the deep convolution neural network GoogLeNet for music type recognition, and the test accuracy is 99.6%. In addition, the parallel GoogLeNet technology based on inverse autoregressive flow is used. The unique improvement is that acoustic features can be quickly converted into corresponding speech time-domain waveforms, reaching the real-time level, improving the efficiency of model training and loading, and outputting speech with higher naturalness. In order to further prove the reliability of the experimental results, the spectrogram datasets are imported into Resnet18 and Shufflenet for training, and the test accuracy of 99.2% is obtained. The results show that this method can effectively classify and recognize music. The experimental results show that this scheme can achieve more accurate classification. The research realizes the recognition of national music through deep learning spectrogram classification for the first time, which is an intelligent and fast new method of classification and recognition.
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Chen T, Su P, Shen Y, Chen L, Mahmud M, Zhao Y, Antoniou G. A dominant set-informed interpretable fuzzy system for automated diagnosis of dementia. Front Neurosci 2022; 16:867664. [PMID: 35979331 PMCID: PMC9376621 DOI: 10.3389/fnins.2022.867664] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/01/2022] [Accepted: 07/05/2022] [Indexed: 11/13/2022] Open
Abstract
Dementia is an incurable neurodegenerative disease primarily affecting the older population, for which the World Health Organisation has set to promoting early diagnosis and timely management as one of the primary goals for dementia care. While a range of popular machine learning algorithms and their variants have been applied for dementia diagnosis, fuzzy systems, which have been known effective in dealing with uncertainty and offer to explicitly reason how a diagnosis can be inferred, sporadically appear in recent literature. Given the advantages of a fuzzy rule-based model, which could potentially result in a clinical decision support system that offers understandable rules and a transparent inference process to support dementia diagnosis, this paper proposes a novel fuzzy inference system by adapting the concept of dominant sets that arise from the study of graph theory. A peeling-off strategy is used to iteratively extract from the constructed edge-weighted graph a collection of dominant sets. Each dominant set is further converted into a parameterized fuzzy rule, which is finally optimized in a supervised adaptive network-based fuzzy inference framework. An illustrative example is provided that demonstrates the interpretable rules and the transparent reasoning process of reaching a decision. Further systematic experiments conducted on data from the Open Access Series of Imaging Studies (OASIS) repository, also validate its superior performance over alternative methods.
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Affiliation(s)
- Tianhua Chen
- Department of Computer Science, School of Computing and Engineering, University of Huddersfield, Huddersfield, United Kingdom
| | - Pan Su
- School of Control and Computer Engineering, North China Electric Power University, Beijing, China
| | - Yinghua Shen
- School of Economics and Business Administration, Chongqing University, Chongqing, China
| | - Lu Chen
- Institute of Big Data Science and Industry, Shanxi University, Taiyuan, China
| | - Mufti Mahmud
- Department of Computer Science, Nottingham Trent University, Nottingham, United Kingdom
| | - Yitian Zhao
- Cixi Institute of Biomedical Engineering, Ningbo Institute of Materials Technology and Engineering, Chinese Academy of Sciences, Ningbo, China
| | - Grigoris Antoniou
- Department of Computer Science, School of Computing and Engineering, University of Huddersfield, Huddersfield, United Kingdom
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Khojaste-Sarakhsi M, Haghighi SS, Ghomi SF, Marchiori E. Deep learning for Alzheimer's disease diagnosis: A survey. Artif Intell Med 2022; 130:102332. [PMID: 35809971 DOI: 10.1016/j.artmed.2022.102332] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/25/2020] [Revised: 04/29/2022] [Accepted: 05/30/2022] [Indexed: 11/28/2022]
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36
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Li X, Liu Y, Kang J, Sun Y, Xu Y, Yuan Y, Han Y, Xie P. Identifying Amnestic Mild Cognitive Impairment With Convolutional Neural Network Adapted to the Spectral Entropy Heat Map of the Electroencephalogram. Front Hum Neurosci 2022; 16:924222. [PMID: 35874151 PMCID: PMC9298556 DOI: 10.3389/fnhum.2022.924222] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/20/2022] [Accepted: 06/20/2022] [Indexed: 11/13/2022] Open
Abstract
Mild cognitive impairment (MCI) is a preclinical stage of Alzheimer's disease (AD), and early diagnosis and intervention may delay its deterioration. However, the electroencephalogram (EEG) differences between patients with amnestic mild cognitive impairment (aMCI) and healthy controls (HC) subjects are not as significant compared to those with AD. This study addresses this situation by proposing a computer-aided diagnostic method that also aims to improve model performance and assess the sensitive areas of the subject's brain. The EEG data of 46 subjects (20HC/26aMCI) were enhanced with windowed moving segmentation and transformed from 1D temporal data to 2D spectral entropy images to measure the efficient information in the time-frequency domain from the point of view of information entropy; A novel convolution module is devised, which considerably reduces the number of model learning parameters and saves computing resources on the premise of ensuring diagnostic performance; One more thing, the cognitive diagnostic contribution of the corresponding channels in each brain region was measured by the weight coefficient of the input and convolution unit. Our results showed that when the segmental window overlap rate was increased from 0 to 75%, the corresponding generalization accuracy increased from 91.673 ± 0.9578% to 94.642 ± 0.4035%; Approximately 35% reduction in model learnable parameters by optimizing the network structure while maintaining accuracy; The top four channels were FP1, F7, T5, and F4, corresponding to the frontal and temporal lobes, in descending order of the mean value of the weight coefficients. This paper proposes a novel method based on spectral entropy image and convolutional neural network (CNN), which provides a new perspective for the identifying of aMCI based on EEG.
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Affiliation(s)
- Xin Li
- Key Laboratory of Measurement Technology and Instrumentation of Hebei Province, Institute of Electric Engineering, Yanshan University, Qinhuangdao, China
| | - Yi Liu
- Key Laboratory of Measurement Technology and Instrumentation of Hebei Province, Institute of Electric Engineering, Yanshan University, Qinhuangdao, China
| | - Jiannan Kang
- College of Electronic and Information Engineering, Hebei University, Baoding, China
| | - Yu Sun
- China-Japan Friendship Hospital, Beijing, China
| | - Yonghong Xu
- Key Laboratory of Measurement Technology and Instrumentation of Hebei Province, Institute of Electric Engineering, Yanshan University, Qinhuangdao, China
| | - Yi Yuan
- Key Laboratory of Measurement Technology and Instrumentation of Hebei Province, Institute of Electric Engineering, Yanshan University, Qinhuangdao, China
| | - Ying Han
- Department of Neurology, Xuanwu Hospital of Capital Medical University, Beijing, China
| | - Ping Xie
- Key Laboratory of Measurement Technology and Instrumentation of Hebei Province, Institute of Electric Engineering, Yanshan University, Qinhuangdao, China
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Perez-Valero E, Morillas C, Lopez-Gordo MA, Carrera-Muñoz I, López-Alcalde S, Vílchez-Carrillo RM. An Automated Approach for the Detection of Alzheimer's Disease From Resting State Electroencephalography. Front Neuroinform 2022; 16:924547. [PMID: 35898959 PMCID: PMC9309796 DOI: 10.3389/fninf.2022.924547] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/20/2022] [Accepted: 06/20/2022] [Indexed: 12/05/2022] Open
Abstract
Early detection is crucial to control the progression of Alzheimer's disease and to postpone intellectual decline. Most current detection techniques are costly, inaccessible, or invasive. Furthermore, they require laborious analysis, what delays the start of medical treatment. To overcome this, researchers have recently investigated AD detection based on electroencephalography, a non-invasive neurophysiology technique, and machine learning algorithms. However, these approaches typically rely on manual procedures such as visual inspection, that requires additional personnel for the analysis, or on cumbersome EEG acquisition systems. In this paper, we performed a preliminary evaluation of a fully-automated approach for AD detection based on a commercial EEG acquisition system and an automated classification pipeline. For this purpose, we recorded the resting state brain activity of 26 participants from three groups: mild AD, mild cognitive impairment (MCI-non-AD), and healthy controls. First, we applied automated data-driven algorithms to reject EEG artifacts. Then, we obtained spectral, complexity, and entropy features from the preprocessed EEG segments. Finally, we assessed two binary classification problems: mild AD vs. controls, and MCI-non-AD vs. controls, through leave-one-subject-out cross-validation. The preliminary results that we obtained are comparable to the best reported in literature, what suggests that AD detection could be automatically detected through automated processing and commercial EEG systems. This is promising, since it may potentially contribute to reducing costs related to AD screening, and to shortening detection times, what may help to advance medical treatment.
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Affiliation(s)
- Eduardo Perez-Valero
- Department of Computers Architecture and Technology, University of Granada, Granada, Spain
- Brain Computer Interface Laboratory, Research Center for Information and Communications Technologies, University of Granada, Granada, Spain
| | - Christian Morillas
- Department of Computers Architecture and Technology, University of Granada, Granada, Spain
- Brain Computer Interface Laboratory, Research Center for Information and Communications Technologies, University of Granada, Granada, Spain
| | - Miguel A. Lopez-Gordo
- Brain Computer Interface Laboratory, Research Center for Information and Communications Technologies, University of Granada, Granada, Spain
- Department of Signal Theory, Telematics, and Communications, University of Granada, Granada, Spain
- *Correspondence: Miguel A. Lopez-Gordo
| | - Ismael Carrera-Muñoz
- Cognitive Neurology Group, Hospital Universitario Virgen de las Nieves, Granada, Spain
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Drage R, Escudero J, Parra MA, Scally B, Anghinah R, De Araujo AVL, Basile LF, Abasolo D. A novel deep learning approach using AlexNet for the classification of electroencephalograms in Alzheimer's Disease and Mild Cognitive Impairment. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2022; 2022:3175-3178. [PMID: 36085668 DOI: 10.1109/embc48229.2022.9871497] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/15/2023]
Abstract
Alzheimer's Disease (AD) is the most common form of dementia. Mild Cognitive Impairment (MCI) is the term given to the stage describing prodromal AD and represents a 'risk factor' in early-stage AD diagnosis from normal cognitive decline due to ageing. The electroencephalogram (EEG) has been studied extensively for AD characterization, but reliable early-stage diagnosis continues to present a challenge. The aim of this study was to introduce a novel way of classifying between AD patients, MCI subjects, and age-matched healthy control (HC) subjects using EEG-derived feature images and deep learning techniques. The EEG recordings of 141 age-matched subjects (52 AD, 37 MCI, 52 HC) were converted into 2D greyscale images representing the Pearson correlation coefficients and the distance Lempel-Ziv Complexity (dLZC) between the 21 EEG channels. Each feature type was computed from EEG epochs of 1s, 2s, 5s and 10s segmented from the original recording. The CNN architecture AlexNet was modified and employed for this three-way classification task and a 70/30 split was used for training and validation with each of the different epoch lengths and EEG-derived images. Whilst a maximum classification accuracy of 73.49% was obtained using dLZC-derived images from 10s epochs as input to the model, the classification accuracy reached 98.13% using the images obtained from Pearson correlation coefficients and 5s epochs. Clinical Relevance- The preliminary findings from this study show that deep learning applied to the analysis of the EEG can classify subjects with accuracies close to 100.
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Gkenios G, Latsiou K, Diamantaras K, Chouvarda I, Tsolaki M. Diagnosis of Alzheimer's disease and Mild Cognitive Impairment using EEG and Recurrent Neural Networks. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2022; 2022:3179-3182. [PMID: 36086481 DOI: 10.1109/embc48229.2022.9871302] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/15/2023]
Abstract
Alzheimer's disease (AD) is the main cause of dementia and Mild cognitive impairment (MCI) is a prodromal stage of AD whose early detection is considered crucial as it can contribute in slowing the progression of AD. In our study we attempted to classify a subject into AD, MCI, or Healthy Control (HC) groups with the use of electroencephalogram (EEG) data. Due to the time-series nature of EEG we exper-imented with the powerful recurrent neural network (RNN) classifiers and more specifically with models including basic or bidirectional Long Short-Term Memory (LSTM) modules. The EEG signals from 17 channels were preprocessed using a 0.1-32 Hz band-pass filter and then segmented into 2-second epochs during which, the subject had closed eyes. Finally, on each segment Fast Fourier Transform (FFT) was applied. To evaluate our models we studied four different classification problems: problem 1: separating subject into three classes (HC, MCI, AD) and problems 2-4: pairwise classifications AD vs. MCI, AD vs. HC and MCI vs. HC. For each problem we employed two different cross-validation approaches ( a) by segment and (b) by patient. In the first one, segments from a subject EEG may exist in both training and validations set, while in the second one, all the EEG segments of a subject can only exist in either the training or the validation set. In the AD-MCI-HC classification we achieved an accuracy of 99% by segment cross-validation, which was an improvement to earlier studies that utilized recurrent neural network models. In the pairwise classification problems we achieved over 90% accuracy by segment and over 80% by subject.
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40
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Shan X, Cao J, Huo S, Chen L, Sarrigiannis PG, Zhao Y. Spatial-temporal graph convolutional network for Alzheimer classification based on brain functional connectivity imaging of electroencephalogram. Hum Brain Mapp 2022; 43:5194-5209. [PMID: 35751844 PMCID: PMC9812255 DOI: 10.1002/hbm.25994] [Citation(s) in RCA: 15] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/06/2022] [Revised: 05/19/2022] [Accepted: 06/08/2022] [Indexed: 01/15/2023] Open
Abstract
Functional connectivity of the human brain, representing statistical dependence of information flow between cortical regions, significantly contributes to the study of the intrinsic brain network and its functional mechanism. To fully explore its potential in the early diagnosis of Alzheimer's disease (AD) using electroencephalogram (EEG) recordings, this article introduces a novel dynamical spatial-temporal graph convolutional neural network (ST-GCN) for better classification performance. Different from existing studies that are based on either topological brain function characteristics or temporal features of EEG, the proposed ST-GCN considers both the adjacency matrix of functional connectivity from multiple EEG channels and corresponding dynamics of signal EEG channel simultaneously. Different from the traditional graph convolutional neural networks, the proposed ST-GCN makes full use of the constrained spatial topology of functional connectivity and the discriminative dynamic temporal information represented by the 1D convolution. We conducted extensive experiments on the clinical EEG data set of AD patients and Healthy Controls. The results demonstrate that the proposed method achieves better classification performance (92.3%) than the state-of-the-art methods. This approach can not only help diagnose AD but also better understand the effect of normal ageing on brain network characteristics before we can accurately diagnose the condition based on resting-state EEG.
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Affiliation(s)
- Xiaocai Shan
- Institute of Geology and GeophysicsChinese Academy of SciencesBeijingChina,School of Aerospace, Transport and ManufacturingCranfield UniversityCranfieldUK
| | - Jun Cao
- School of Aerospace, Transport and ManufacturingCranfield UniversityCranfieldUK
| | - Shoudong Huo
- Institute of Geology and GeophysicsChinese Academy of SciencesBeijingChina
| | - Liangyu Chen
- Department of NeurosurgeryShengjing Hospital of China Medical UniversityShenyangChina
| | | | - Yifan Zhao
- School of Aerospace, Transport and ManufacturingCranfield UniversityCranfieldUK
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41
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Tang T, Li H, Zhou G, Gu X, Xue J. Discriminant Subspace Low-Rank Representation Algorithm for Electroencephalography-Based Alzheimer’s Disease Recognition. Front Aging Neurosci 2022; 14:943436. [PMID: 35813948 PMCID: PMC9263439 DOI: 10.3389/fnagi.2022.943436] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/13/2022] [Accepted: 06/06/2022] [Indexed: 11/30/2022] Open
Abstract
Alzheimer’s disease (AD) is a chronic progressive neurodegenerative disease that often occurs in the elderly. Electroencephalography (EEG) signals have a strong correlation with neuropsychological test results and brain structural changes. It has become an effective aid in the early diagnosis of AD by exploiting abnormal brain activity. Because the original EEG has the characteristics of weak amplitude, strong background noise and randomness, the research on intelligent AD recognition based on machine learning is still in the exploratory stage. This paper proposes the discriminant subspace low-rank representation (DSLRR) algorithm for EEG-based AD and mild cognitive impairment (MCI) recognition. The subspace learning and low-rank representation are flexibly integrated into a feature representation model. On the one hand, based on the low-rank representation, the graph discriminant embedding is introduced to constrain the representation coefficients, so that the robust representation coefficients can preserve the local manifold structure of the EEG data. On the other hand, the least squares regression, principle component analysis, and global graph embedding are introduced into the subspace learning, to make the model more discriminative. The objective function of DSLRR is solved by the inexact augmented Lagrange multiplier method. The experimental results show that the DSLRR algorithm has good classification performance, which is helpful for in-depth research on AD and MCI recognition.
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Affiliation(s)
- Tusheng Tang
- School of Computer Science and Information Engineering, Changzhou Institute of Technology, Changzhou, China
| | - Hui Li
- School of Computer Science and Information Engineering, Changzhou Institute of Technology, Changzhou, China
| | - Guohua Zhou
- School of Information Engineering, Changzhou Institute of Industry Technology, Changzhou, China
- School of Computer Science and Artificial Intelligence, Changzhou University, Changzhou, China
| | - Xiaoqing Gu
- School of Computer Science and Artificial Intelligence, Changzhou University, Changzhou, China
| | - Jing Xue
- Department of Nephrology, The Affiliated Wuxi People’s Hospital of Nanjing Medical University, Wuxi, China
- *Correspondence: Jing Xue,
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Liu Y, Tang K, Cai W, Chen A, Zhou G, Li L, Liu R. MPC-STANet: Alzheimer's Disease Recognition Method Based on Multiple Phantom Convolution and Spatial Transformation Attention Mechanism. Front Aging Neurosci 2022; 14:918462. [PMID: 35754963 PMCID: PMC9226438 DOI: 10.3389/fnagi.2022.918462] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/12/2022] [Accepted: 05/04/2022] [Indexed: 11/13/2022] Open
Abstract
Alzheimer's disease (AD) is a progressive neurodegenerative disease with insidious and irreversible onset. The recognition of the disease stage of AD and the administration of effective interventional treatment are important to slow down and control the progression of the disease. However, due to the unbalanced distribution of the acquired data volume, the problem that the features change inconspicuously in different disease stages of AD, and the scattered and narrow areas of the feature areas (hippocampal region, medial temporal lobe, etc.), the effective recognition of AD remains a critical unmet need. Therefore, we first employ class-balancing operation using data expansion and Synthetic Minority Oversampling Technique (SMOTE) to avoid the AD MRI dataset being affected by classification imbalance in the training. Subsequently, a recognition network based on Multi-Phantom Convolution (MPC) and Space Conversion Attention Mechanism (MPC-STANet) with ResNet50 as the backbone network is proposed for the recognition of the disease stages of AD. In this study, we propose a Multi-Phantom Convolution in the way of convolution according to the channel direction and integrate it with the average pooling layer into two basic blocks of ResNet50: Conv Block and Identity Block to propose the Multi-Phantom Residual Block (MPRB) including Multi-Conv Block and Multi-Identity Block to better recognize the scattered and tiny disease features of Alzheimer's disease. Meanwhile, the weight coefficients are extracted from both vertical and horizontal directions using the Space Conversion Attention Mechanism (SCAM) to better recognize subtle structural changes in the AD MRI images. The experimental results show that our proposed method achieves an average recognition accuracy of 96.25%, F1 score of 95%, and mAP of 93%, and the number of parameters is only 1.69 M more than ResNet50.
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Affiliation(s)
- Yujian Liu
- College of Computer and Information Engineering, Central South University of Forestry and Technology, Changsha, China
| | - Kun Tang
- College of Computer and Information Engineering, Central South University of Forestry and Technology, Changsha, China
| | - Weiwei Cai
- School of Artificial Intelligence and Computer Science, Jiangnan University, Wuxi, China
- AiTech Artificial Intelligence Research Institute, Changsha, China
| | - Aibin Chen
- College of Computer and Information Engineering, Central South University of Forestry and Technology, Changsha, China
| | - Guoxiong Zhou
- College of Computer and Information Engineering, Central South University of Forestry and Technology, Changsha, China
| | - Liujun Li
- Department of Civil, Architectural and Environmental Engineering, Missouri University of Science and Technology, Rolla, MO, United States
| | - Runmin Liu
- Department of Civil, Architectural and Environmental Engineering, Missouri University of Science and Technology, Rolla, MO, United States
- College of Sports Engineering and Information Technology, Wuhan Sports University, Wuhan, China
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43
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Fouladi S, Safaei AA, Mammone N, Ghaderi F, Ebadi MJ. Efficient Deep Neural Networks for Classification of Alzheimer’s Disease and Mild Cognitive Impairment from Scalp EEG Recordings. Cognit Comput 2022. [DOI: 10.1007/s12559-022-10033-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
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44
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Perez-Valero E, Lopez-Gordo MÁ, Gutiérrez CM, Carrera-Muñoz I, Vílchez-Carrillo RM. A self-driven approach for multi-class discrimination in Alzheimer's disease based on wearable EEG. COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE 2022; 220:106841. [PMID: 35523023 DOI: 10.1016/j.cmpb.2022.106841] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/15/2022] [Revised: 03/25/2022] [Accepted: 04/25/2022] [Indexed: 06/14/2023]
Abstract
Early detection is critical to control Alzheimer's disease (AD) progression and postpone cognitive decline. Traditional medical procedures such as magnetic resonance imaging are costly, involve long waiting lists, and require complex analysis. Alternatively, for the past years, researchers have successfully evaluated AD detection approaches based on machine learning and electroencephalography (EEG). Nonetheless, these approaches frequently rely upon manual processing or involve non-portable EEG hardware. These aspects are suboptimal regarding automated diagnosis, since they require additional personnel and hinder portability. In this work, we report the preliminary evaluation of a self-driven AD multi-class discrimination approach based on a commercial EEG acquisition system using sixteen channels. For this purpose, we recorded the EEG of three groups of participants: mild AD, mild cognitive impairment (MCI) non-AD, and controls, and we implemented a self-driven analysis pipeline to discriminate the three groups. First, we applied automated artifact rejection algorithms to the EEG recordings. Then, we extracted power, entropy, and complexity features from the preprocessed epochs. Finally, we evaluated a multi-class classification problem using a multi-layer perceptron through leave-one-subject-out cross-validation. The preliminary results that we obtained are comparable to the best in literature (0.88 F1-score), what suggests that AD can potentially be detected through a self-driven approach based on commercial EEG and machine learning. We believe this work and further research could contribute to opening the door for the detection of AD in a single consultation session, therefore reducing the costs associated to AD screening and potentially advancing medical treatment.
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Affiliation(s)
- Eduardo Perez-Valero
- Department of Computer Architecture and Technology, University of Granada, Spain; Brain-Computer Interfaces Laboratory, Research Centre for Information and Communications Technologies, University of Granada, Spain
| | - Miguel Ángel Lopez-Gordo
- Department of Signal Theory, Telematics and Communications, University of Granada, Spain; Brain-Computer Interfaces Laboratory, Research Centre for Information and Communications Technologies, University of Granada, Spain.
| | - Christian Morillas Gutiérrez
- Department of Computer Architecture and Technology, University of Granada, Spain; Brain-Computer Interfaces Laboratory, Research Centre for Information and Communications Technologies, University of Granada, Spain
| | - Ismael Carrera-Muñoz
- Cognitive Neurology Group, Neurology Unit, Hospital Universitario Virgen de las Nieves, Granada, Spain
| | - Rosa M Vílchez-Carrillo
- Cognitive Neurology Group, Neurology Unit, Hospital Universitario Virgen de las Nieves, Granada, Spain
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45
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Mental Workload Classification Method Based on EEG Cross-Session Subspace Alignment. MATHEMATICS 2022. [DOI: 10.3390/math10111875] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Electroencephalogram (EEG) signals are sensitive to the level of Mental Workload (MW). However, the random non-stationarity of EEG signals will lead to low accuracy and a poor generalization ability for cross-session MW classification. To solve this problem of the different marginal distribution of EEG signals in different time periods, an MW classification method based on EEG Cross-Session Subspace Alignment (CSSA) is presented to identify the level of MW induced in visual manipulation tasks. The Independent Component Analysis (ICA) method is used to obtain the Independent Components (ICs) of labeled and unlabeled EEG signals. The energy features of ICs are extracted as source domains and target domains, respectively. The marginal distributions of source subspace base vectors are aligned with the target subspace base vectors based on the linear mapping. The Kullback–Leibler (KL) divergences between the two domains are calculated to select approximately similar transformed base vectors of source subspace. The energy features in all selected vectors are trained to build a new classifier using the Support Vector Machine (SVM). Then it can realize MW classification using the cross-session EEG signals, and has good classification accuracy.
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46
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Mushtaq E, Zameer A, Umer M, Abbasi AA. A two-stage intrusion detection system with auto-encoder and LSTMs. Appl Soft Comput 2022. [DOI: 10.1016/j.asoc.2022.108768] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/02/2022]
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47
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Wen D, Li R, Tang H, Liu Y, Wan X, Dong X, Saripan MI, Lan X, Song H, Zhou Y. Task-state EEG signal classification for spatial cognitive evaluation based on multi-scale high-density convolutional neural network. IEEE Trans Neural Syst Rehabil Eng 2022; 30:1041-1051. [PMID: 35404820 DOI: 10.1109/tnsre.2022.3166224] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Abstract
In this study, a multi-scale high-density convolutional neural network (MHCNN) classification method for spatial cognitive ability assessment was proposed, aiming at achieving the binary classification of task-state EEG signals before and after spatial cognitive training. Besides, the multi-dimensional conditional mutual information method was used to extract the frequency band features of the EEG data. And the coupling features under the combination of multi-frequency bands were transformed into multi-spectral images. At the same time, the idea of Densenet was introduced to improve the multi-scale convolutional neural network. Firstly, according to the discreteness of multispectral EEG image features, two-scale convolution kernels were used to calculate and learn useful channel and frequency band feature information in multispectral image data. Secondly, to enhance feature propagation and reduce the number of parameters, the dense network was connected after the multi-scale convolutional network, and the learning rate change function of the stochastic gradient descent algorithm was optimized to objectively evaluate the training effect. The experimental results showed that compared with the classical convolution neural network (CNN) and multi-scale convolution neural network, the proposed MHCNN had better classification performance in the six frequency band combinations with the highest accuracy of 98%: Theta-Alpha2-Gamma, Alpha2-Beta2-Gamma, Beta1-Beta2-Gamma, Theta-Beta2-Gamma, Theta-Alpha1-Gamma, and Alpha1-Alpha2-Gamma. By comparing the classification results of six frequency band combinations, it was found that the combination of the Theta-Beta2-Gamma band had the best classification effect. The MHCNN classification method proposed in this research could be used as an effective biological indicator of spatial cognitive training effect and could be extended to other brain function evaluations.
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48
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Li F, Matsumori S, Egawa N, Yoshimoto S, Yamashiro K, Mizutani H, Uchida N, Kokuryu A, Kuzuya A, Kojima R, Hayashi Y, Takahashi R. Predictive Diagnostic Approach to Dementia and Dementia Subtypes Using Wireless and Mobile Electroencephalography: A Pilot Study. Bioelectricity 2022; 4:3-11. [PMID: 39372226 PMCID: PMC11450329 DOI: 10.1089/bioe.2021.0030] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
Background Developing a screening method for mild cognitive impairment in the aging population and intervening early in the progression of dementia based on such a method, remains challenging. Electroencephalography (EEG) is a noninvasive and sensitive tool to assess the functional activity of the brain, and wireless and mobile EEG (wmEEG) could serve as an alternative screening technique that is widely tolerable in patients with dementia from the preclinical to severe stage. Materials and Methods Using wmEEG, we recorded bioelectrical activity (BA) from the forehead in 101 individuals with dementia and nondementia controls (NCs) during 4 tasks and investigated which task could differentiate dementia from NC. Results We found significant differences in three power spectra of the time-frequency analysis (3-4, 5-7, and 17-23 Hz) between dementia and NC under an eyes-open condition and a significant consistent difference in a specific slow alpha power spectrum (6-8 Hz) between Alzheimer's disease (AD) and dementia with Lewy bodies (DLB) under an eyes-closed condition. These results were confirmed by classification analysis using a deep learning method based on the whole wmEEG data sets, in which the accuracy of discriminating dementia from NC under the eyes-open condition was higher than that under the eyes-closed condition (0.71 vs. 0.52, respectively). Moreover, the accuracy of discriminating AD from DLB under the eyes-closed condition was higher than that under the eyes-open condition (0.77 vs. 0.64, respectively). Conclusion The result of this pilot study suggests that wmEEG can be a useful tool for recording BA, and that analyzing BA may help to detect early dementia and discriminate dementia subtypes effectively and objectively.
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Affiliation(s)
- Fangzhou Li
- Department of Neurology, Kyoto University Graduate School of Medicine, Kyoto, Japan
| | | | - Naohiro Egawa
- Department of Neurology, Kyoto University Graduate School of Medicine, Kyoto, Japan
| | | | | | | | - Noriko Uchida
- Department of Neurology, Kyoto University Graduate School of Medicine, Kyoto, Japan
| | - Atsuko Kokuryu
- Department of Neurology, Kyoto University Graduate School of Medicine, Kyoto, Japan
| | - Akira Kuzuya
- Department of Neurology, Kyoto University Graduate School of Medicine, Kyoto, Japan
| | - Ryosuke Kojima
- Department of Human Health Sciences, Kyoto University Graduate School of Medicine, Kyoto, Japan
| | - Yu Hayashi
- Department of Human Health Sciences, Kyoto University Graduate School of Medicine, Kyoto, Japan
| | - Ryosuke Takahashi
- Department of Neurology, Kyoto University Graduate School of Medicine, Kyoto, Japan
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Intra-group and inter-group electrocardiograph coding image fusion and classification based on multi-scale group convolution feature fusion network. Biomed Signal Process Control 2022. [DOI: 10.1016/j.bspc.2021.103374] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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50
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Permutation Entropy-Based Interpretability of Convolutional Neural Network Models for Interictal EEG Discrimination of Subjects with Epileptic Seizures vs. Psychogenic Non-Epileptic Seizures. ENTROPY 2022; 24:e24010102. [PMID: 35052128 PMCID: PMC8775069 DOI: 10.3390/e24010102] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/06/2021] [Revised: 01/01/2022] [Accepted: 01/04/2022] [Indexed: 02/01/2023]
Abstract
The differential diagnosis of epileptic seizures (ES) and psychogenic non-epileptic seizures (PNES) may be difficult, due to the lack of distinctive clinical features. The interictal electroencephalographic (EEG) signal may also be normal in patients with ES. Innovative diagnostic tools that exploit non-linear EEG analysis and deep learning (DL) could provide important support to physicians for clinical diagnosis. In this work, 18 patients with new-onset ES (12 males, 6 females) and 18 patients with video-recorded PNES (2 males, 16 females) with normal interictal EEG at visual inspection were enrolled. None of them was taking psychotropic drugs. A convolutional neural network (CNN) scheme using DL classification was designed to classify the two categories of subjects (ES vs. PNES). The proposed architecture performs an EEG time-frequency transformation and a classification step with a CNN. The CNN was able to classify the EEG recordings of subjects with ES vs. subjects with PNES with 94.4% accuracy. CNN provided high performance in the assigned binary classification when compared to standard learning algorithms (multi-layer perceptron, support vector machine, linear discriminant analysis and quadratic discriminant analysis). In order to interpret how the CNN achieved this performance, information theoretical analysis was carried out. Specifically, the permutation entropy (PE) of the feature maps was evaluated and compared in the two classes. The achieved results, although preliminary, encourage the use of these innovative techniques to support neurologists in early diagnoses.
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