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Hong JH, Lee JY, Dutta A, Yoon SL, Cho YU, Kim K, Kang K, Kim HW, Kim DH, Park J, Cho M, Kim K, An JB, Lee HL, Hwang D, Kim HJ, Ha Y, Lee HY, Cheng H, Yu KJ. Monolayer, open-mesh, pristine PEDOT:PSS-based conformal brain implants for fully MRI-compatible neural interfaces. Biosens Bioelectron 2024; 260:116446. [PMID: 38820722 PMCID: PMC11216815 DOI: 10.1016/j.bios.2024.116446] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/29/2024] [Revised: 05/13/2024] [Accepted: 05/27/2024] [Indexed: 06/02/2024]
Abstract
Understanding brain function is essential for advancing our comprehension of human cognition, behavior, and neurological disorders. Magnetic resonance imaging (MRI) stands out as a powerful tool for exploring brain function, providing detailed insights into its structure and physiology. Combining MRI technology with electrophysiological recording system can enhance the comprehension of brain functionality through synergistic effects. However, the integration of neural implants with MRI technology presents challenges because of its strong electromagnetic (EM) energy during MRI scans. Therefore, MRI-compatible neural implants should facilitate detailed investigation of neural activities and brain functions in real-time in high resolution, without compromising patient safety and imaging quality. Here, we introduce the fully MRI-compatible monolayer open-mesh pristine PEDOT:PSS neural interface. This approach addresses the challenges encountered while using traditional metal-based electrodes in the MRI environment such as induced heat or imaging artifacts. PEDOT:PSS has a diamagnetic property with low electrical conductivity and negative magnetic susceptibility similar to human tissues. Furthermore, by adopting the optimized open-mesh structure, the induced currents generated by EM energy are significantly diminished, leading to optimized MRI compatibility. Through simulations and experiments, our PEDOT:PSS-based open-mesh electrodes showed improved performance in reducing heat generation and eliminating imaging artifacts in an MRI environment. The electrophysiological recording capability was also validated by measuring the local field potential (LFP) from the somatosensory cortex with an in vivo experiment. The development of neural implants with maximized MRI compatibility indicates the possibility of potential tools for future neural diagnostics.
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Affiliation(s)
- Jung-Hoon Hong
- Functional Bio-integrated Electronics and Energy Management Lab, School of Electrical and Electronic Engineering, Yonsei University, 50 Yonsei-ro, Seodaemun-gu, 03722, Seoul, Republic of Korea
| | - Ju Young Lee
- Functional Bio-integrated Electronics and Energy Management Lab, School of Electrical and Electronic Engineering, Yonsei University, 50 Yonsei-ro, Seodaemun-gu, 03722, Seoul, Republic of Korea
| | - Ankan Dutta
- Department of Engineering Science and Mechanics, The Pennsylvania State University, University Park, 16802, State College, PA, USA; Center for Neural Engineering, The Pennsylvania State University, University Park, 16802, State College, PA, USA
| | - Sol Lip Yoon
- Spine & Spinal Cord Institute, Department of Neurosurgery, College of Medicine, Yonsei University, 03722, Seoul, Republic of Korea
| | - Young Uk Cho
- Functional Bio-integrated Electronics and Energy Management Lab, School of Electrical and Electronic Engineering, Yonsei University, 50 Yonsei-ro, Seodaemun-gu, 03722, Seoul, Republic of Korea; Center for Emergent Matter Science (CEMS), RIKEN, The Institute of Physical and Chemical Research, 351-0198, Saitama, Japan
| | - Kyubeen Kim
- Functional Bio-integrated Electronics and Energy Management Lab, School of Electrical and Electronic Engineering, Yonsei University, 50 Yonsei-ro, Seodaemun-gu, 03722, Seoul, Republic of Korea
| | - Kyowon Kang
- Functional Bio-integrated Electronics and Energy Management Lab, School of Electrical and Electronic Engineering, Yonsei University, 50 Yonsei-ro, Seodaemun-gu, 03722, Seoul, Republic of Korea
| | - Hyun Woo Kim
- Functional Bio-integrated Electronics and Energy Management Lab, School of Electrical and Electronic Engineering, Yonsei University, 50 Yonsei-ro, Seodaemun-gu, 03722, Seoul, Republic of Korea
| | - Dae-Hee Kim
- Avison Biomedical Research Center, College of Medicine, Yonsei University, 50-1 Yonsei-ro, Seodaemun-gu, 03722, Seoul, Republic of Korea
| | - Jaejin Park
- Functional Bio-integrated Electronics and Energy Management Lab, School of Electrical and Electronic Engineering, Yonsei University, 50 Yonsei-ro, Seodaemun-gu, 03722, Seoul, Republic of Korea
| | - Myeongki Cho
- Functional Bio-integrated Electronics and Energy Management Lab, School of Electrical and Electronic Engineering, Yonsei University, 50 Yonsei-ro, Seodaemun-gu, 03722, Seoul, Republic of Korea
| | - Kiho Kim
- Functional Bio-integrated Electronics and Energy Management Lab, School of Electrical and Electronic Engineering, Yonsei University, 50 Yonsei-ro, Seodaemun-gu, 03722, Seoul, Republic of Korea
| | - Jong Bin An
- Electronic Device Laboratory, School of Electrical and Electronic Engineering, Yonsei University, 50 Yonsei-ro, Seodaemun-gu, 03722, Seoul, Republic of Korea
| | - Hye-Lan Lee
- Spine & Spinal Cord Institute, Department of Neurosurgery, College of Medicine, Yonsei University, 03722, Seoul, Republic of Korea
| | - Dosik Hwang
- School of Electrical and Electronic Engineering, Yonsei University, 50 Yonsei-ro, Seodaemun-gu, 03722, Seoul, Republic of Korea
| | - Hyun Jae Kim
- Electronic Device Laboratory, School of Electrical and Electronic Engineering, Yonsei University, 50 Yonsei-ro, Seodaemun-gu, 03722, Seoul, Republic of Korea
| | - Yoon Ha
- Spine & Spinal Cord Institute, Department of Neurosurgery, College of Medicine, Yonsei University, 03722, Seoul, Republic of Korea; POSTECH Biotech Center, Pohang University of Science and Technology (POSTECH), 37673, Pohang, Republic of Korea
| | - Hye Yeong Lee
- Spine & Spinal Cord Institute, Department of Neurosurgery, College of Medicine, Yonsei University, 03722, Seoul, Republic of Korea.
| | - Huanyu Cheng
- Department of Engineering Science and Mechanics, The Pennsylvania State University, University Park, 16802, State College, PA, USA; Center for Neural Engineering, The Pennsylvania State University, University Park, 16802, State College, PA, USA.
| | - Ki Jun Yu
- Functional Bio-integrated Electronics and Energy Management Lab, School of Electrical and Electronic Engineering, Yonsei University, 50 Yonsei-ro, Seodaemun-gu, 03722, Seoul, Republic of Korea; Department of Electrical and Electronic Engineering, YU-Korea Institute of Science and Technology (KIST) Institute, Yonsei University, 50, Yonsei-ro, Seodaemun-gu, 03722, Seoul, Republic of Korea.
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Pupil Dynamics-derived Sleep Stage Classification of a Head-fixed Mouse Using a Recurrent Neural Network. Keio J Med 2023. [PMID: 36740272 DOI: 10.2302/kjm.2022-0020-oa] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Abstract
The standard method for sleep state classification is thresholding the amplitudes of electroencephalography (EEG) and electromyography (EMG) data, followed by manual correction by an expert. Although popular, this method has some shortcomings: (1) the time-consuming manual correction by human experts is sometimes a bottleneck hindering sleep studies, (2) EEG electrodes on the skull interfere with wide-field imaging of the cortical activity of a head-fixed mouse under a microscope, (3) invasive surgery to fix the electrodes on the thin mouse skull risks brain tissue injury, and (4) metal electrodes for EEG and EMG recording are difficult to apply to some experimental apparatus such as that for functional magnetic resonance imaging. To overcome these shortcomings, we propose a pupil dynamics-based vigilance state classification method for a head-fixed mouse using a long short-term memory (LSTM) model, a variant of a recurrent neural network, for multi-class labeling of NREM, REM, and WAKE states. For supervisory hypnography, EEG and EMG recording were performed on head-fixed mice. This setup was combined with left eye pupillometry using a USB camera and a markerless tracking toolbox, DeepLabCut. Our open-source LSTM model with feature inputs of pupil diameter, pupil location, pupil velocity, and eyelid opening for 10 s at a 10 Hz sampling rate achieved vigilance state estimation with a higher classification performance (macro F1 score, 0.77; accuracy, 86%) than a feed-forward neural network. Findings from a diverse range of pupillary dynamics implied possible subdivision of the vigilance states defined by EEG and EMG. Pupil dynamics-based hypnography can expand the scope of alternatives for sleep stage scoring of head-fixed mice.
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Lee JH, Liu Q, Dadgar-Kiani E. Solving brain circuit function and dysfunction with computational modeling and optogenetic fMRI. Science 2022; 378:493-499. [PMID: 36327349 PMCID: PMC10543742 DOI: 10.1126/science.abq3868] [Citation(s) in RCA: 11] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/31/2023]
Abstract
Can we construct a model of brain function that enables an understanding of whole-brain circuit mechanisms underlying neurological disease and use it to predict the outcome of therapeutic interventions? How are pathologies in neurological disease, some of which are observed to have spatial spreading mechanisms, associated with circuits and brain function? In this review, we discuss approaches that have been used to date and future directions that can be explored to answer these questions. By combining optogenetic functional magnetic resonance imaging (fMRI) with computational modeling, cell type-specific, large-scale brain circuit function and dysfunction are beginning to be quantitatively parameterized. We envision that these developments will pave the path for future therapeutics developments based on a systems engineering approach aimed at directly restoring brain function.
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Affiliation(s)
- Jin Hyung Lee
- Department of Neurology and Neurological Sciences, Stanford University, Stanford, CA 94305, USA
- Department of Bioengineering, Stanford University, Stanford, CA 94305, USA
- Department of Neurosurgery, Stanford University, Stanford, CA 94305, USA
- Department of Electrical Engineering, Stanford University, CA 94305, USA
| | - Qin Liu
- Department of Neurology and Neurological Sciences, Stanford University, Stanford, CA 94305, USA
| | - Ehsan Dadgar-Kiani
- Department of Neurology and Neurological Sciences, Stanford University, Stanford, CA 94305, USA
- Department of Bioengineering, Stanford University, Stanford, CA 94305, USA
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Lopez-Castro A, Angeles-Valdez D, Rojas-Piloni G, Garza-Villarreal EA. Focal electrical stimulation on an alcohol disorder model using magnetic resonance imaging-compatible chronic neural monopolar carbon fiber electrodes. Front Neurosci 2022; 16:945594. [PMID: 36248656 PMCID: PMC9558902 DOI: 10.3389/fnins.2022.945594] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/16/2022] [Accepted: 09/05/2022] [Indexed: 11/13/2022] Open
Abstract
Neuromodulation interventions, such as Deep Brain Stimulation (DBS) and repeated transcranial magnetic stimulation (rTMS), are proposed as possible new complementary therapies to treat substance use disorders (SUD) such as alcohol use disorder (AUD). It is hypothesized that neuromodulation may induce neural plasticity in the reward and frontostriatal systems via electrical field induction, possibly reducing symptoms. Preclinical self-administration rodent models of AUD may help us gain insight into the effects of neuromodulation therapies on different pathology, as well as the neural mechanisms behind the positive effects. DBS, or any type of brain stimulation using intracranial electrodes in rodents, would benefit from the use of magnetic resonance imaging (MRI) to study the longitudinal effects and mechanisms of stimulation as well as novel targets, as it is a non-invasive technique that allows the analysis of structural and functional changes in the brain. To do this, there is a need for MRI-compatible electrodes that allow for MRI acquisition with minimal distortion of the magnetic field. In this protocol, we present a method for the construction and surgery of chronically implantable monopolar carbon electrodes for use in rats. Unlike conventional electrodes, carbon electrodes are resistant to high temperatures, flexible, and generate fewer artifacts in MRI compared to conventional ones. We validated its use by using a focal electrical stimulation high-frequency (20 Hz) protocol that lasted ∼10 sessions. We propose that this technique can also be used for the research of the neurophysiological bases of the neuromodulatory treatment in other preclinical substance use disorders (SUD) models.
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Affiliation(s)
- Alejandra Lopez-Castro
- Instituto de Neurobiología, Universidad Nacional Autónoma de México, Querétaro, Mexico
- *Correspondence: Alejandra Lopez-Castro,
| | - Diego Angeles-Valdez
- Instituto de Neurobiología, Universidad Nacional Autónoma de México, Querétaro, Mexico
- Department of Biomedical Sciences of Cells and Systems, Cognitive Neuroscience Center, University Medical Center Groningen, University of Groningen, Groningen, Netherlands
| | - Gerardo Rojas-Piloni
- Instituto de Neurobiología, Universidad Nacional Autónoma de México, Querétaro, Mexico
| | - Eduardo A. Garza-Villarreal
- Instituto de Neurobiología, Universidad Nacional Autónoma de México, Querétaro, Mexico
- Eduardo A. Garza-Villarreal,
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Zhang Y, Le S, Li H, Ji B, Wang MH, Tao J, Liang JQ, Zhang XY, Kang XY. MRI magnetic compatible electrical neural interface: From materials to application. Biosens Bioelectron 2021; 194:113592. [PMID: 34507098 DOI: 10.1016/j.bios.2021.113592] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2021] [Accepted: 08/24/2021] [Indexed: 01/07/2023]
Abstract
Neural electrical interfaces are important tools for local neural stimulation and recording, which potentially have wide application in the diagnosis and treatment of neural diseases, as well as in the transmission of neural activity for brain-computer interface (BCI) systems. At the same time, magnetic resonance imaging (MRI) is one of the effective and non-invasive techniques for recording whole-brain signals, providing details of brain structures and also activation pattern maps. Simultaneous recording of extracellular neural signals and MRI combines two expressions of the same neural activity and is believed to be of great importance for the understanding of brain function. However, this combination makes requests on the magnetic and electronic performance of neural interface devices. MRI-compatibility refers here to a technological approach to simultaneous MRI and electrode recording or stimulation without artifacts in imaging. Trade-offs between materials magnetic susceptibility selection and electrical function should be considered. Herein, prominent trends in selecting materials of suitable magnetic properties are analyzed and material design, function and application of neural interfaces are outlined together with the remaining challenge to fabricate MRI-compatible neural interface.
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Affiliation(s)
- Yuan Zhang
- Laboratory for Neural Interface and Brain Computer Interface, Institute of AI and Robotics, Academy for Engineering and Technology, FUDAN University, 220 Handan Rd., Yangpu District, Shanghai, 200433, China; Ji Hua Laboratory, 28 Island Ring South Rd., Foshan City, 528200, China; Engineering Research Center of AI & Robotics, Ministry of Education, Shanghai Engineering Research Center of AI & Robotics, MOE Frontiers Center for Brain Science, Shanghai 200433, China; Research Center for Intelligent Sensing, Zhejiang Lab, Hangzhou, 311100, China; Yiwu Research Institute of Fudan University, Chengbei Road, Yiwu City, 322000, Zhejiang, China
| | - Song Le
- Laboratory for Neural Interface and Brain Computer Interface, Institute of AI and Robotics, Academy for Engineering and Technology, FUDAN University, 220 Handan Rd., Yangpu District, Shanghai, 200433, China; Ji Hua Laboratory, 28 Island Ring South Rd., Foshan City, 528200, China; Engineering Research Center of AI & Robotics, Ministry of Education, Shanghai Engineering Research Center of AI & Robotics, MOE Frontiers Center for Brain Science, Shanghai 200433, China; Research Center for Intelligent Sensing, Zhejiang Lab, Hangzhou, 311100, China; Yiwu Research Institute of Fudan University, Chengbei Road, Yiwu City, 322000, Zhejiang, China
| | - Hui Li
- Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, 1068 Xueyuan Avenue, Shenzhen University Town, Shenzhen, 518055, China
| | - Bowen Ji
- Unmanned System Research Institute; Ministry of Education Key Laboratory of Micro/Nano Systems for Aerospace, School of Mechanical Engineering, Northwestern Polytechnical University, Xi'an, 710072, China
| | - Ming-Hao Wang
- The MOE Engineering Research Center of Smart Microsensors and Microsystems, School of Electronics & Information, Hangzhou Dianzi University, Hangzhou, 310018, China
| | - Jin Tao
- State Key Laboratory of Applied Optics, Changchun Institute of Optics, Fine Mechanics and Physics, Chinese Academy of Sciences, Changchun, Jilin, 130033, China
| | - Jing-Qiu Liang
- State Key Laboratory of Applied Optics, Changchun Institute of Optics, Fine Mechanics and Physics, Chinese Academy of Sciences, Changchun, Jilin, 130033, China
| | - Xiao-Yong Zhang
- Institute of Science and Technology for Brain-inspired Intelligence, FUDAN University, Shanghai, 200433, China; Key Laboratory of Computational Neuroscience and Brain-Inspired Intelligence (Fudan University), Ministry of Education, Shanghai 200433, China
| | - Xiao-Yang Kang
- Laboratory for Neural Interface and Brain Computer Interface, Institute of AI and Robotics, Academy for Engineering and Technology, FUDAN University, 220 Handan Rd., Yangpu District, Shanghai, 200433, China; Ji Hua Laboratory, 28 Island Ring South Rd., Foshan City, 528200, China; Engineering Research Center of AI & Robotics, Ministry of Education, Shanghai Engineering Research Center of AI & Robotics, MOE Frontiers Center for Brain Science, Shanghai 200433, China; Research Center for Intelligent Sensing, Zhejiang Lab, Hangzhou, 311100, China; Yiwu Research Institute of Fudan University, Chengbei Road, Yiwu City, 322000, Zhejiang, China.
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Devi M, Vomero M, Fuhrer E, Castagnola E, Gueli C, Nimbalkar S, Hirabayashi M, Kassegne S, Stieglitz T, Sharma S. Carbon-based neural electrodes: promises and challenges. J Neural Eng 2021; 18. [PMID: 34404037 DOI: 10.1088/1741-2552/ac1e45] [Citation(s) in RCA: 17] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/27/2021] [Accepted: 08/17/2021] [Indexed: 01/01/2023]
Abstract
Neural electrodes are primary functional elements of neuroelectronic devices designed to record neural activity based on electrochemical signals. These electrodes may also be utilized for electrically stimulating the neural cells, such that their response can be simultaneously recorded. In addition to being medically safe, the electrode material should be electrically conductive and electrochemically stable under harsh biological environments. Mechanical flexibility and conformability, resistance to crack formation and compatibility with common microfabrication techniques are equally desirable properties. Traditionally, (noble) metals have been the preferred for neural electrode applications due to their proven biosafety and a relatively high electrical conductivity. Carbon is a recent addition to this list, which is far superior in terms of its electrochemical stability and corrosion resistance. Carbon has also enabled 3D electrode fabrication as opposed to the thin-film based 2D structures. One of carbon's peculiar aspects is its availability in a wide range of allotropes with specialized properties that render it highly versatile. These variations, however, also make it difficult to understand carbon itself as a unique material, and thus, each allotrope is often regarded independently. Some carbon types have already shown promising results in bioelectronic medicine, while many others remain potential candidates. In this topical review, we first provide a broad overview of the neuroelectronic devices and the basic requirements of an electrode material. We subsequently discuss the carbon family of materials and their properties that are useful in neural applications. Examples of devices fabricated using bulk and nano carbon materials are reviewed and critically compared. We then summarize the challenges, future prospects and next-generation carbon technology that can be helpful in the field of neural sciences. The article aims at providing a common platform to neuroscientists, electrochemists, biologists, microsystems engineers and carbon scientists to enable active and comprehensive efforts directed towards carbon-based neuroelectronic device fabrication.
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Affiliation(s)
- Mamta Devi
- School of Engineering, Indian Institute of Technology Mandi, Kamand, Himachal Pradesh 175075, India
| | - Maria Vomero
- Bioelectronic Systems Laboratory, Columbia University, 500 West 120th Street, New York, NY 10027, United States of America
| | - Erwin Fuhrer
- School of Computing and Electrical Engineering, Indian Institute of Technology Mandi, Kamand, Himachal Pradesh 175075 India
| | - Elisa Castagnola
- Department of Bioengineering, University of Pittsburgh, Pittsburgh, PA 15213, United States of America
| | - Calogero Gueli
- Laboratory for Biomedical Microtechnology, Department of Microsystems Engineering-IMTEK, University of Freiburg, Georges-Koehler-Allee 080, 79110 Freiburg, Germany
| | - Surabhi Nimbalkar
- NanoFAB.SDSU Research Lab, Department of Mechanical Engineering, San Diego State University and NSF-ERC Center for Neurotechnology (CNT), 5500 Campanile Drive, San Diego, CA 92182, United States of America
| | - Mieko Hirabayashi
- NanoFAB.SDSU Research Lab, Department of Mechanical Engineering, San Diego State University and NSF-ERC Center for Neurotechnology (CNT), 5500 Campanile Drive, San Diego, CA 92182, United States of America
| | - Sam Kassegne
- NanoFAB.SDSU Research Lab, Department of Mechanical Engineering, San Diego State University and NSF-ERC Center for Neurotechnology (CNT), 5500 Campanile Drive, San Diego, CA 92182, United States of America
| | - Thomas Stieglitz
- Laboratory for Biomedical Microtechnology, Department of Microsystems Engineering-IMTEK, University of Freiburg, Georges-Koehler-Allee 080, 79110 Freiburg, Germany.,BrainLinks-BrainTools Center, University of Freiburg, Georges-Koehler-Allee 080, 79110 Freiburg, Germany.,Bernstein Center Freiburg, University of Freiburg, Hansastr. 9a, 79104 Freiburg, Germany
| | - Swati Sharma
- School of Engineering, Indian Institute of Technology Mandi, Kamand, Himachal Pradesh 175075, India
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Intracortical Microelectrode Array Unit Yield under Chronic Conditions: A Comparative Evaluation. MICROMACHINES 2021; 12:mi12080972. [PMID: 34442594 PMCID: PMC8400387 DOI: 10.3390/mi12080972] [Citation(s) in RCA: 15] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/21/2021] [Revised: 08/10/2021] [Accepted: 08/12/2021] [Indexed: 01/01/2023]
Abstract
While microelectrode arrays (MEAs) offer the promise of elucidating functional neural circuitry and serve as the basis for a cortical neuroprosthesis, the challenge of designing and demonstrating chronically reliable technology remains. Numerous studies report “chronic” data but the actual time spans and performance measures corresponding to the experimental work vary. In this study, we reviewed the experimental durations that constitute chronic studies across a range of MEA types and animal species to gain an understanding of the widespread variability in reported study duration. For rodents, which are the most commonly used animal model in chronic studies, we examined active electrode yield (AEY) for different array types as a means to contextualize the study duration variance, as well as investigate and interpret the performance of custom devices in comparison to conventional MEAs. We observed wide-spread variance within species for the chronic implantation period and an AEY that decayed linearly in rodent models that implanted commercially-available devices. These observations provide a benchmark for comparing the performance of new technologies and highlight the need for consistency in chronic MEA studies. Additionally, to fully derive performance under chronic conditions, the duration of abiotic failure modes, biological processes induced by indwelling probes, and intended application of the device are key determinants.
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Lu HY, Lorenc ES, Zhu H, Kilmarx J, Sulzer J, Xie C, Tobler PN, Watrous AJ, Orsborn AL, Lewis-Peacock J, Santacruz SR. Multi-scale neural decoding and analysis. J Neural Eng 2021; 18. [PMID: 34284369 PMCID: PMC8840800 DOI: 10.1088/1741-2552/ac160f] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/08/2020] [Accepted: 07/20/2021] [Indexed: 12/15/2022]
Abstract
Objective. Complex spatiotemporal neural activity encodes rich information related to behavior and cognition. Conventional research has focused on neural activity acquired using one of many different measurement modalities, each of which provides useful but incomplete assessment of the neural code. Multi-modal techniques can overcome tradeoffs in the spatial and temporal resolution of a single modality to reveal deeper and more comprehensive understanding of system-level neural mechanisms. Uncovering multi-scale dynamics is essential for a mechanistic understanding of brain function and for harnessing neuroscientific insights to develop more effective clinical treatment. Approach. We discuss conventional methodologies used for characterizing neural activity at different scales and review contemporary examples of how these approaches have been combined. Then we present our case for integrating activity across multiple scales to benefit from the combined strengths of each approach and elucidate a more holistic understanding of neural processes. Main results. We examine various combinations of neural activity at different scales and analytical techniques that can be used to integrate or illuminate information across scales, as well the technologies that enable such exciting studies. We conclude with challenges facing future multi-scale studies, and a discussion of the power and potential of these approaches. Significance. This roadmap will lead the readers toward a broad range of multi-scale neural decoding techniques and their benefits over single-modality analyses. This Review article highlights the importance of multi-scale analyses for systematically interrogating complex spatiotemporal mechanisms underlying cognition and behavior.
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Affiliation(s)
- Hung-Yun Lu
- The University of Texas at Austin, Biomedical Engineering, Austin, TX, United States of America
| | - Elizabeth S Lorenc
- The University of Texas at Austin, Psychology, Austin, TX, United States of America.,The University of Texas at Austin, Institute for Neuroscience, Austin, TX, United States of America
| | - Hanlin Zhu
- Rice University, Electrical and Computer Engineering, Houston, TX, United States of America
| | - Justin Kilmarx
- The University of Texas at Austin, Mechanical Engineering, Austin, TX, United States of America
| | - James Sulzer
- The University of Texas at Austin, Mechanical Engineering, Austin, TX, United States of America.,The University of Texas at Austin, Institute for Neuroscience, Austin, TX, United States of America
| | - Chong Xie
- Rice University, Electrical and Computer Engineering, Houston, TX, United States of America
| | - Philippe N Tobler
- University of Zurich, Neuroeconomics and Social Neuroscience, Zurich, Switzerland
| | - Andrew J Watrous
- The University of Texas at Austin, Neurology, Austin, TX, United States of America
| | - Amy L Orsborn
- University of Washington, Electrical and Computer Engineering, Seattle, WA, United States of America.,University of Washington, Bioengineering, Seattle, WA, United States of America.,Washington National Primate Research Center, Seattle, WA, United States of America
| | - Jarrod Lewis-Peacock
- The University of Texas at Austin, Psychology, Austin, TX, United States of America.,The University of Texas at Austin, Institute for Neuroscience, Austin, TX, United States of America
| | - Samantha R Santacruz
- The University of Texas at Austin, Biomedical Engineering, Austin, TX, United States of America.,The University of Texas at Austin, Institute for Neuroscience, Austin, TX, United States of America
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9
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Abstract
BACKGROUND The application of nanotechnology in medicine encompasses an interdisciplinary field of sciences for the diagnosis, treatment, and monitoring of medical conditions. This study aims to systematically review and summarize the advances of nanotechnology applicable to neurosurgery. METHODS We performed a PubMed advanced search of reports exploring the advances of nanotechnology and nanomedicine relating to diagnosis, treatment, or both, in neurosurgery, for the last decade. The search was performed according to PRISMA guidelines, and the following data were extracted from each paper: title; authors; article type; PMID; DOI; year of publication; in vitro, in vivo model; nanomedical, nanotechnological material; nanofield; neurosurgical field; the application of the system; and main conclusions of the study. RESULTS A total of 78 original studies were included in this review. The results were organized into the following categories: functional neurosurgery, head trauma, neurodegenerative diseases, neuro-oncology, spinal surgery and peripheral nerves, vascular neurosurgery, and studies that apply to more than one field. A further categorization applied in terms of nanomedical field such as neuroimaging, neuro-nanotechnology, neuroregeneration, theranostics, and neuro-nanotherapy. CONCLUSION In reviewing the literature, significant advances in imaging and treatment of central nervous system diseases are underway and are expected to reach clinical practice in the next decade by the application of the rapidly evolving nanotechnology techniques.
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