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Smith K, Strand DD, Walker BJ. Evaluating the contribution of plant metabolic pathways in the light to the ATP:NADPH demand using a meta-analysis of isotopically non-stationary metabolic flux analyses. PHOTOSYNTHESIS RESEARCH 2024; 161:177-189. [PMID: 38874662 PMCID: PMC11324800 DOI: 10.1007/s11120-024-01106-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/21/2024] [Accepted: 06/06/2024] [Indexed: 06/15/2024]
Abstract
Balancing the ATP: NADPH demand from plant metabolism with supply from photosynthesis is essential for preventing photodamage and operating efficiently, so understanding its drivers is important for integrating metabolism with the light reactions of photosynthesis and for bioengineering efforts that may radically change this demand. It is often assumed that the C3 cycle and photorespiration consume the largest amount of ATP and reductant in illuminated leaves and as a result mostly determine the ATP: NADPH demand. However, the quantitative extent to which other energy consuming metabolic processes contribute in large ways to overall ATP: NADPH demand remains unknown. Here, we used the metabolic flux networks of numerous recently published isotopically non-stationary metabolic flux analyses (INST-MFA) to evaluate flux through the C3 cycle, photorespiration, the oxidative pentose phosphate pathway, the tricarboxylic acid cycle, and starch/sucrose synthesis and characterize broad trends in the demand of energy across different pathways and compartments as well as in the overall ATP:NADPH demand. These data sets include a variety of species including Arabidopsis thaliana, Nicotiana tabacum, and Camelina sativa as well as varying environmental factors including high/low light, day length, and photorespiratory levels. Examining these datasets in aggregate reveals that ultimately the bulk of the energy flux occurred in the C3 cycle and photorespiration, however, the energy demand from these pathways did not determine the ATP: NADPH demand alone. Instead, a notable contribution was revealed from starch and sucrose synthesis which might counterbalance photorespiratory demand and result in fewer adjustments in mechanisms which balance the ATP deficit.
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Affiliation(s)
- Kaila Smith
- Michigan State Unversity - Department of Energy, Plant Research Laboratory, Michigan State University, East Lansing, MI, 48824, USA
- Department of Plant Biology, Michigan State University, East Lansing, MI, 48824, USA
- Plant Biotechnology for Health and Sustainability Program, Michigan State University, East Lansing, MI, 48824, USA
| | - Deserah D Strand
- Michigan State Unversity - Department of Energy, Plant Research Laboratory, Michigan State University, East Lansing, MI, 48824, USA
- Department of Plant Biology, Michigan State University, East Lansing, MI, 48824, USA
| | - Berkley J Walker
- Michigan State Unversity - Department of Energy, Plant Research Laboratory, Michigan State University, East Lansing, MI, 48824, USA.
- Department of Plant Biology, Michigan State University, East Lansing, MI, 48824, USA.
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2
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Didaran F, Kordrostami M, Ghasemi-Soloklui AA, Pashkovskiy P, Kreslavski V, Kuznetsov V, Allakhverdiev SI. The mechanisms of photoinhibition and repair in plants under high light conditions and interplay with abiotic stressors. JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY. B, BIOLOGY 2024; 259:113004. [PMID: 39137703 DOI: 10.1016/j.jphotobiol.2024.113004] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/09/2024] [Revised: 07/20/2024] [Accepted: 08/05/2024] [Indexed: 08/15/2024]
Abstract
This review comprehensively examines the phenomenon of photoinhibition in plants, focusing mainly on the intricate relationship between photodamage and photosystem II (PSII) repair and the role of PSII extrinsic proteins and protein phosphorylation in these processes. In natural environments, photoinhibition occurs together with a suite of concurrent stress factors, including extreme temperatures, drought and salinization. Photoinhibition, primarily caused by high irradiance, results in a critical imbalance between the rate of PSII photodamage and its repair. Central to this process is the generation of reactive oxygen species (ROS), which not only impair the photosynthetic apparatus first PSII but also play a signalling role in chloroplasts and other cellulular structures. ROS generated under stress conditions inhibit the repair of photodamaged PSII by suppressing D1 protein synthesis and affecting PSII protein phosphorylation. Furthermore, this review considers how environmental stressors exacerbate PSII damage by interfering with PSII repair primarily by reducing de novo protein synthesis. In addition to causing direct damage, these stressors also contribute to ROS production by restricting CO2 fixation, which also reduces the intensity of protein synthesis. This knowledge has significant implications for agricultural practices and crop improvement under stressful conditions.
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Affiliation(s)
- Fardad Didaran
- Department of Horticulture, Aburaihan Campus, University of Tehran, Iran
| | - Mojtaba Kordrostami
- Nuclear Agriculture Research School, Nuclear Science and Technology Research Institute (NSTRI), Karaj, Iran.
| | - Ali Akbar Ghasemi-Soloklui
- Nuclear Agriculture Research School, Nuclear Science and Technology Research Institute (NSTRI), Karaj, Iran.
| | - Pavel Pashkovskiy
- К.А. Timiryazev Institute of Plant Physiology RAS, Botanicheskaya Street 35, Moscow, 127276, Russia.
| | - Vladimir Kreslavski
- Institute of Basic Biological Problems, Russian Academy of Sciences, Pushchino, Moscow Region 142290, Russia
| | - Vladimir Kuznetsov
- К.А. Timiryazev Institute of Plant Physiology RAS, Botanicheskaya Street 35, Moscow, 127276, Russia
| | - Suleyman I Allakhverdiev
- К.А. Timiryazev Institute of Plant Physiology RAS, Botanicheskaya Street 35, Moscow, 127276, Russia
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Santanoo S, Ittipong P, Banterng P, Vorasoot N, Jogloy S, Vongcharoen K, Theerakulpisut P. Photosynthetic Performance, Carbohydrate Partitioning, Growth, and Yield among Cassava Genotypes under Full Irrigation and Early Drought Treatment in a Tropical Savanna Climate. PLANTS (BASEL, SWITZERLAND) 2024; 13:2049. [PMID: 39124167 PMCID: PMC11313790 DOI: 10.3390/plants13152049] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/06/2024] [Revised: 07/22/2024] [Accepted: 07/23/2024] [Indexed: 08/12/2024]
Abstract
In a tropical savanna climate like Thailand, cassava can be planted all year round and harvested at 8 to 12 months after planting (MAP). However, it is not clear how water limitation during the dry season without rain affects carbon assimilation, partitioning, and yield. In this field investigation, six cassava genotypes were planted in the rainy season (August 2021) under continuous irrigation (control) or subjected to drought for 60 days from 3MAP to 5MAP during the dry season (November 2021 to January 2022) with no irrigation and rainfall. After that, the plants were rewatered and continued growing until harvest at 12MAP. After 60 days of stress, there were significant reductions in the mean net photosynthesis rate (Pn), petiole, and root dry weight (DW), and slight reductions in leaf, stem, and tuber DW. The mean starch concentrations were reduced by 42% and 16% in leaves and tubers, respectively, but increased by 12% in stems. At 6MAP after 30 days of rewatering, Pn fully recovered, and stem starch was remobilized resulting in a dramatic increase in the DW of all the organs. Although the mean tuber DW of the drought plants at 6MAP was significantly lower than that of the control, it was significantly higher at 12MAP. Moreover, the mean tuber starch concentration at 12MAP of the drought plants (18.81%) was also significantly higher than that of the controls (16.46%). In the drought treatment, the high-yielding varieties, RY9, RY72, KU50, and CMR38-125-77 were similarly productive in terms of tuber DW and starch concentration while the breeding line CM523-7 produced the lowest tuber biomass and significantly lower starch content. Therefore, for cassava planted in the rainy season in the tropical savanna climate, the exposure to drought during the early growth stage was more beneficial than the continuous irrigation.
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Affiliation(s)
- Supranee Santanoo
- Department of Biology, Faculty of Science, Khon Kaen University, Khon Kaen 40002, Thailand;
| | - Passamon Ittipong
- Department of Agronomy, Faculty of Agriculture, Khon Kaen University, Khon Kaen 40002, Thailand; (P.I.); (P.B.); (N.V.); (S.J.)
| | - Poramate Banterng
- Department of Agronomy, Faculty of Agriculture, Khon Kaen University, Khon Kaen 40002, Thailand; (P.I.); (P.B.); (N.V.); (S.J.)
| | - Nimitr Vorasoot
- Department of Agronomy, Faculty of Agriculture, Khon Kaen University, Khon Kaen 40002, Thailand; (P.I.); (P.B.); (N.V.); (S.J.)
| | - Sanun Jogloy
- Department of Agronomy, Faculty of Agriculture, Khon Kaen University, Khon Kaen 40002, Thailand; (P.I.); (P.B.); (N.V.); (S.J.)
| | - Kochaphan Vongcharoen
- Faculty of Science and Health Technology, Kalasin University, Kalasin 46000, Thailand;
| | - Piyada Theerakulpisut
- Department of Biology, Faculty of Science, Khon Kaen University, Khon Kaen 40002, Thailand;
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Dou B, Li Y, Wang F, Chen L, Zhang W. Chassis engineering for high light tolerance in microalgae and cyanobacteria. Crit Rev Biotechnol 2024:1-19. [PMID: 38987975 DOI: 10.1080/07388551.2024.2357368] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/25/2024] [Accepted: 05/05/2024] [Indexed: 07/12/2024]
Abstract
Oxygenic photosynthesis in microalgae and cyanobacteria is considered an important chassis to accelerate energy transition and mitigate global warming. Currently, cultivation systems for photosynthetic microbes for large-scale applications encountered excessive light exposure stress. High light stress can: affect photosynthetic efficiency, reduce productivity, limit cell growth, and even cause cell death. Deciphering photoprotection mechanisms and constructing high-light tolerant chassis have been recent research focuses. In this review, we first briefly introduce the self-protection mechanisms of common microalgae and cyanobacteria in response to high light stress. These mechanisms mainly include: avoiding excess light absorption, dissipating excess excitation energy, quenching excessive high-energy electrons, ROS detoxification, and PSII repair. We focus on the species-specific differences in these mechanisms as well as recent advancements. Then, we review engineering strategies for creating high-light tolerant chassis, such as: reducing the size of the light-harvesting antenna, optimizing non-photochemical quenching, optimizing photosynthetic electron transport, and enhancing PSII repair. Finally, we propose a comprehensive exploration of mechanisms: underlying identified high light tolerant chassis, identification of new genes pertinent to high light tolerance using innovative methodologies, harnessing CRISPR systems and artificial intelligence for chassis engineering modification, and introducing plant photoprotection mechanisms as future research directions.
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Affiliation(s)
- Biyun Dou
- Laboratory of Synthetic Microbiology, School of Chemical Engineering and Technology, Tianjin University, Tianjin, P.R. China
- Key Laboratory of Systems Bioengineering (Ministry of Education), Tianjin University, Tianjin, P.R. China
| | - Yang Li
- Laboratory of Synthetic Microbiology, School of Chemical Engineering and Technology, Tianjin University, Tianjin, P.R. China
- Key Laboratory of Systems Bioengineering (Ministry of Education), Tianjin University, Tianjin, P.R. China
| | - Fangzhong Wang
- Laboratory of Synthetic Microbiology, School of Chemical Engineering and Technology, Tianjin University, Tianjin, P.R. China
- Key Laboratory of Systems Bioengineering (Ministry of Education), Tianjin University, Tianjin, P.R. China
- Center for Biosafety Research and Strategy, Tianjin University, Tianjin, P.R. China
| | - Lei Chen
- Laboratory of Synthetic Microbiology, School of Chemical Engineering and Technology, Tianjin University, Tianjin, P.R. China
- Key Laboratory of Systems Bioengineering (Ministry of Education), Tianjin University, Tianjin, P.R. China
| | - Weiwen Zhang
- Laboratory of Synthetic Microbiology, School of Chemical Engineering and Technology, Tianjin University, Tianjin, P.R. China
- Key Laboratory of Systems Bioengineering (Ministry of Education), Tianjin University, Tianjin, P.R. China
- Center for Biosafety Research and Strategy, Tianjin University, Tianjin, P.R. China
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Grebe S, Porcar-Castell A, Riikonen A, Paakkarinen V, Aro EM. Accounting for photosystem I photoinhibition sheds new light on seasonal acclimation strategies of boreal conifers. JOURNAL OF EXPERIMENTAL BOTANY 2024; 75:3973-3992. [PMID: 38572950 PMCID: PMC11233416 DOI: 10.1093/jxb/erae145] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/30/2023] [Accepted: 05/30/2024] [Indexed: 04/05/2024]
Abstract
The photosynthetic acclimation of boreal evergreen conifers is controlled by regulatory and photoprotective mechanisms that allow conifers to cope with extreme environmental changes. However, the underlying dynamics of photosystem II (PSII) and photosystem I (PSI) remain unresolved. Here, we investigated the dynamics of PSII and PSI during the spring recovery of photosynthesis in Pinus sylvestris and Picea abies using a combination of chlorophyll a fluorescence, P700 difference absorbance measurements, and quantification of key thylakoid protein abundances. In particular, we derived a new set of PSI quantum yield equations, correcting for the effects of PSI photoinhibition. Using the corrected equations, we found that the seasonal dynamics of PSII and PSI photochemical yields remained largely in balance, despite substantial seasonal changes in the stoichiometry of PSII and PSI core complexes driven by PSI photoinhibition. Similarly, the previously reported seasonal up-regulation of cyclic electron flow was no longer evident, after accounting for PSI photoinhibition. Overall, our results emphasize the importance of considering the dynamics of PSII and PSI to elucidate the seasonal acclimation of photosynthesis in overwintering evergreens. Beyond the scope of conifers, our corrected PSI quantum yields expand the toolkit for future studies aimed at elucidating the dynamic regulation of PSI.
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Affiliation(s)
- Steffen Grebe
- Molecular Plant Biology, Department of Life Technologies, University of Turku, 20014 Turku, Finland
- Optics of Photosynthesis Laboratory, Viikki Plant Science Center, Institute for Atmospheric and Earth System Research/Forest Sciences, University of Helsinki, 00014 Helsinki, Finland
| | - Albert Porcar-Castell
- Optics of Photosynthesis Laboratory, Viikki Plant Science Center, Institute for Atmospheric and Earth System Research/Forest Sciences, University of Helsinki, 00014 Helsinki, Finland
| | - Anu Riikonen
- Optics of Photosynthesis Laboratory, Viikki Plant Science Center, Institute for Atmospheric and Earth System Research/Forest Sciences, University of Helsinki, 00014 Helsinki, Finland
| | - Virpi Paakkarinen
- Molecular Plant Biology, Department of Life Technologies, University of Turku, 20014 Turku, Finland
| | - Eva-Mari Aro
- Molecular Plant Biology, Department of Life Technologies, University of Turku, 20014 Turku, Finland
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Wang H, Qin L, Qi W, Elshobary M, Wang W, Feng P, Wang Z, Zhu S. Harmony in detoxification: Microalgae unleashing the potential of lignocellulosic pretreatment wastewater for resource utilization. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 927:171888. [PMID: 38531442 DOI: 10.1016/j.scitotenv.2024.171888] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/22/2023] [Revised: 02/28/2024] [Accepted: 03/20/2024] [Indexed: 03/28/2024]
Abstract
Lignocellulosic biomass is a pivotal renewable resource in biorefinery process, requiring pretreatment, primarily chemical pretreatment, for effective depolymerization and subsequent transformation. This process yields solid residue for saccharification and lignocellulosic pretreatment wastewater (LPW), which comprises sugars and inhibitors such as phenols and furans. This study explored the microalgal capacity to treat LPW, focusing on two key hydrolysate inhibitors: furfural and vanillin, which impact the growth of six green microalgae. Chlorella sorokiniana exhibited higher tolerance to furfural and vanillin. However, both inhibitors hindered the growth of C. sorokiniana and disrupted algal photosynthetic system, with vanillin displaying superior inhibition. A synergistic inhibitory effect (Q < 0.85) was observed with furfural and vanillin on algal growth. Furfural transformation to low-toxic furfuryl alcohol was rapid, yet the addition of vanillin hindered this process. Vanillin stimulated carbohydrate accumulation, with 50.48 % observed in the 0.1 g/L furfural + 0.1 g/L vanillin group. Additionally, vanillin enhanced the accumulation of C16: 0 and C18: 2, reaching 21.71 % and 40.36 %, respectively, with 0.1 g/L vanillin. This study proposed a microalgae-based detoxification and resource utilization approach for LPW, enhancing the comprehensive utilization of lignocellulosic components. The observed biomass modifications also suggested potential applications for biofuel production, contributing to the evolving landscape of sustainable biorefinery processes.
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Affiliation(s)
- Huiying Wang
- Guangzhou Institute of Energy Conversion, Chinese Academy of Sciences, Guangzhou 510640, PR China; CAS Key Laboratory of Renewable Energy, Guangzhou 510640, PR China; Guangdong Provincial Key Laboratory of New and Renewable Energy Research and Development, Guangzhou 510640, PR China; University of Science and Technology of China, Hefei 230026, PR China
| | - Lei Qin
- Guangzhou Institute of Energy Conversion, Chinese Academy of Sciences, Guangzhou 510640, PR China; CAS Key Laboratory of Renewable Energy, Guangzhou 510640, PR China; Guangdong Provincial Key Laboratory of New and Renewable Energy Research and Development, Guangzhou 510640, PR China.
| | - Wei Qi
- Guangzhou Institute of Energy Conversion, Chinese Academy of Sciences, Guangzhou 510640, PR China; CAS Key Laboratory of Renewable Energy, Guangzhou 510640, PR China; Guangdong Provincial Key Laboratory of New and Renewable Energy Research and Development, Guangzhou 510640, PR China
| | - Mostafa Elshobary
- Botany and Microbiology Department, Faculty of Science, Tanta University, Tanta 31527, Egypt
| | - Wen Wang
- Guangzhou Institute of Energy Conversion, Chinese Academy of Sciences, Guangzhou 510640, PR China; CAS Key Laboratory of Renewable Energy, Guangzhou 510640, PR China; Guangdong Provincial Key Laboratory of New and Renewable Energy Research and Development, Guangzhou 510640, PR China
| | - Pingzhong Feng
- Guangzhou Institute of Energy Conversion, Chinese Academy of Sciences, Guangzhou 510640, PR China; CAS Key Laboratory of Renewable Energy, Guangzhou 510640, PR China; Guangdong Provincial Key Laboratory of New and Renewable Energy Research and Development, Guangzhou 510640, PR China
| | - Zhongming Wang
- Guangzhou Institute of Energy Conversion, Chinese Academy of Sciences, Guangzhou 510640, PR China; CAS Key Laboratory of Renewable Energy, Guangzhou 510640, PR China; Guangdong Provincial Key Laboratory of New and Renewable Energy Research and Development, Guangzhou 510640, PR China
| | - Shunni Zhu
- Guangzhou Institute of Energy Conversion, Chinese Academy of Sciences, Guangzhou 510640, PR China; CAS Key Laboratory of Renewable Energy, Guangzhou 510640, PR China; Guangdong Provincial Key Laboratory of New and Renewable Energy Research and Development, Guangzhou 510640, PR China.
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7
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Demircan N, Sonmez MC, Akyol TY, Ozgur R, Turkan I, Dietz KJ, Uzilday B. Alternative electron sinks in chloroplasts and mitochondria of halophytes as a safety valve for controlling ROS production during salinity. PHYSIOLOGIA PLANTARUM 2024; 176:e14397. [PMID: 38894507 DOI: 10.1111/ppl.14397] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/06/2024] [Revised: 05/07/2024] [Accepted: 05/12/2024] [Indexed: 06/21/2024]
Abstract
Electron flow through the electron transport chain (ETC) is essential for oxidative phosphorylation in mitochondria and photosynthesis in chloroplasts. Electron fluxes depend on environmental parameters, e.g., ionic and osmotic conditions and endogenous factors, and this may cause severe imbalances. Plants have evolved alternative sinks to balance the reductive load on the electron transport chains in order to avoid overreduction, generation of reactive oxygen species (ROS), and to cope with environmental stresses. These sinks act primarily as valves for electron drainage and secondarily as regulators of tolerance-related metabolism, utilizing the excess reductive energy. High salinity is an environmental stressor that stimulates the generation of ROS and oxidative stress, which affects growth and development by disrupting the redox homeostasis of plants. While glycophytic plants are sensitive to high salinity, halophytic plants tolerate, grow, and reproduce at high salinity. Various studies have examined the ETC systems of glycophytic plants, however, information about the state and regulation of ETCs in halophytes under non-saline and saline conditions is scarce. This review focuses on alternative electron sinks in chloroplasts and mitochondria of halophytic plants. In cases where information on halophytes is lacking, we examined the available knowledge on the relationship between alternative sinks and gradual salinity resilience of glycophytes. To this end, transcriptional responses of involved components of photosynthetic and respiratory ETCs were compared between the glycophyte Arabidopsis thaliana and the halophyte Schrenkiella parvula, and the time-courses of these transcripts were examined in A. thaliana. The observed regulatory patterns are discussed in the context of reactive molecular species formation in halophytes and glycophytes.
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Affiliation(s)
- Nil Demircan
- Department of Biology, Faculty of Science, Ege University, Izmir, Türkiye
| | | | - Turgut Yigit Akyol
- Department of Molecular Biology and Genetics, Aarhus University, Aarhus, Denmark
| | - Rengin Ozgur
- Department of Biology, Faculty of Science, Ege University, Izmir, Türkiye
| | - Ismail Turkan
- Department of Soil and Plant Nutrition, Faculty of Agricultural Sciences and Technologies, Yasar University, İzmir, Türkiye
| | - Karl-Josef Dietz
- Faculty of Biology, Department of Biochemistry and Physiology of Plants, University of Bielefeld, Bielefeld, Germany
| | - Baris Uzilday
- Department of Biology, Faculty of Science, Ege University, Izmir, Türkiye
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8
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Verhoeven A, Kornkven J. Differences in photoprotective strategy during winter in Eastern white pine and white spruce. TREE PHYSIOLOGY 2024; 44:tpad131. [PMID: 37861656 DOI: 10.1093/treephys/tpad131] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/30/2023] [Revised: 09/22/2023] [Accepted: 10/16/2023] [Indexed: 10/21/2023]
Abstract
Conifers growing in temperate forests utilize sustained forms of thermal dissipation during winter to protect the photosynthetic apparatus from damage, which can be monitored via pronounced reductions in photochemical efficiency (Fv/Fm) during winter. Eastern white pine (Pinus strobus L.) and white spruce (Picea glauca (Moench) Voss) are known to recover from winter stress at different rates, with pine recovering more slowly than spruce, suggesting different mechanisms for sustained dissipation in these species. Our objectives were to monitor pine and spruce throughout spring recovery in order to provide insights into key mechanisms for sustained dissipation in both species. We measured chlorophyll fluorescence, pigments, and abundance and phosphorylation status of key photosynthetic proteins. We found that both species rely on two forms of sustained dissipation involving retention of high amounts of antheraxanthin (A) + zeaxanthin (Z), one that is very slowly reversible and temperature independent and one that is more dynamic and occurs only on subzero days. Differences in protein abundance suggest that spruce, but not pine, likely upregulates cyclic or alternative pathways of electron transport involving the cytochrome b6f complex and photosystem I (PSI). Both species show an increased sustained phosphorylation of the D1 protein on subzero days, and spruce additionally shows dramatic increases in the sustained phosphorylation of light-harvesting complex II (LHCII) and other PSII core proteins on subzero days only, suggesting that a mechanism of sustained dissipation that is temperature dependent requires sustained phosphorylation of photosynthetic proteins in spruce, possibly allowing for direct energy transfer from PSII to PSI as a mechanism of photoprotection. The data suggest differences in strategy among conifers in mechanisms of sustained thermal dissipation in response to winter stress. Additionally, the flexible induction of sustained A + Z and phosphorylation of photosynthetic proteins in response to subzero temperatures during spring recovery seem to be important in providing photoprotection during transitional periods with high temperature fluctuation.
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Affiliation(s)
- Amy Verhoeven
- Biology Department (OWS352), University of St Thomas, 2115 Summit Ave, St Paul, MN 55105 USA
| | - Joan Kornkven
- Biology Department (OWS352), University of St Thomas, 2115 Summit Ave, St Paul, MN 55105 USA
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9
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Degen GE, Pastorelli F, Johnson MP. Proton Gradient Regulation 5 is required to avoid photosynthetic oscillations during light transitions. JOURNAL OF EXPERIMENTAL BOTANY 2024; 75:947-961. [PMID: 37891008 DOI: 10.1093/jxb/erad428] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/21/2023] [Accepted: 10/27/2023] [Indexed: 10/29/2023]
Abstract
The production of ATP and NADPH by the light reactions of photosynthesis and their consumption by the Calvin-Benson-Bassham (CBB) cycle and other downstream metabolic reactions requires careful regulation. Environmental shifts perturb this balance, leading to photo-oxidative stress and losses in CO2 assimilation. Imbalances in the production and consumption of ATP and NADPH manifest themselves as transient instability in the chlorophyll fluorescence, P700, electrochromic shift, and CO2 uptake signals recorded on leaves. These oscillations can be induced in wild-type plants by sudden shifts in CO2 concentration or light intensity; however, mutants exhibiting increased oscillatory behaviour have yet to be reported. This has precluded an understanding of the regulatory mechanisms employed by plants to suppress oscillations. Here we show that the Arabidopsis pgr5 mutant, which is deficient in Proton Gradient Regulation 5 (PGR5)-dependent cyclic electron transfer (CET), exhibits increased oscillatory behaviour. In contrast, mutants lacking the NADH-dehydrogenase-like-dependent CET are largely unaffected. The absence of oscillations in the hope2 mutant which, like pgr5, lacks photosynthetic control and exhibits high ATP synthase conductivity, ruled out loss of these photoprotective mechanisms as causes. Instead, we observed slower formation of the proton motive force and, by inference, ATP synthesis in pgr5 following environmental perturbation, leading to the transient reduction of the electron transfer chain and photosynthetic oscillations. PGR5-dependent CET therefore plays a major role in damping the effect of environmental perturbations on photosynthesis to avoid losses in CO2 fixation.
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Affiliation(s)
- Gustaf E Degen
- Plants, Photosynthesis & Soil, School of Biosciences, University of Sheffield, Sheffield, UK
| | - Federica Pastorelli
- Plants, Photosynthesis & Soil, School of Biosciences, University of Sheffield, Sheffield, UK
| | - Matthew P Johnson
- Plants, Photosynthesis & Soil, School of Biosciences, University of Sheffield, Sheffield, UK
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10
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Ye X, Gao Z, Xu K, Li B, Ren T, Li X, Cong R, Lu Z, Cakmak I, Lu J. Photosynthetic plasticity aggravates the susceptibility of magnesium-deficient leaf to high light in rapeseed plants: the importance of Rubisco and mesophyll conductance. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2024; 117:483-497. [PMID: 37901950 DOI: 10.1111/tpj.16504] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/10/2023] [Revised: 09/14/2023] [Accepted: 10/06/2023] [Indexed: 10/31/2023]
Abstract
Plants grown under low magnesium (Mg) soils are highly susceptible to encountering light intensities that exceed the capacity of photosynthesis (A), leading to a depression of photosynthetic efficiency and eventually to photooxidation (i.e., leaf chlorosis). Yet, it remains unclear which processes play a key role in limiting the photosynthetic energy utilization of Mg-deficient leaves, and whether the plasticity of A in acclimation to irradiance could have cross-talk with Mg, hence accelerating or mitigating the photodamage. We investigated the light acclimation responses of rapeseed (Brassica napus) grown under low- and adequate-Mg conditions. Magnesium deficiency considerably decreased rapeseed growth and leaf A, to a greater extent under high than under low light, which is associated with higher level of superoxide anion radical and more severe leaf chlorosis. This difference was mainly attributable to a greater depression in dark reaction under high light, with a higher Rubisco fallover and a more limited mesophyll conductance to CO2 (gm ). Plants grown under high irradiance enhanced the content and activity of Rubisco and gm to optimally utilize more light energy absorbed. However, Mg deficiency could not fulfill the need to activate the higher level of Rubisco and Rubisco activase in leaves of high-light-grown plants, leading to lower Rubisco activation and carboxylation rate. Additionally, Mg-deficient leaves under high light invested more carbon per leaf area to construct a compact leaf structure with smaller intercellular airspaces, lower surface area of chloroplast exposed to intercellular airspaces, and CO2 diffusion conductance through cytosol. These caused a more severe decrease in within-leaf CO2 diffusion rate and substrate availability. Taken together, plant plasticity helps to improve photosynthetic energy utilization under high light but aggravates the photooxidative damage once the Mg nutrition becomes insufficient.
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Affiliation(s)
- Xiaolei Ye
- Microelement Research Center, Huazhong Agricultural University, Wuhan, 430070, China
- Key Laboratory of Arable Land Conservation (Middle and Lower Reaches of Yangtze River), Ministry of Agriculture and Rural Affairs, Wuhan, 430070, China
| | - Ziyi Gao
- Microelement Research Center, Huazhong Agricultural University, Wuhan, 430070, China
- Key Laboratory of Arable Land Conservation (Middle and Lower Reaches of Yangtze River), Ministry of Agriculture and Rural Affairs, Wuhan, 430070, China
| | - Ke Xu
- Microelement Research Center, Huazhong Agricultural University, Wuhan, 430070, China
- Key Laboratory of Arable Land Conservation (Middle and Lower Reaches of Yangtze River), Ministry of Agriculture and Rural Affairs, Wuhan, 430070, China
| | - Binglin Li
- Microelement Research Center, Huazhong Agricultural University, Wuhan, 430070, China
- Key Laboratory of Arable Land Conservation (Middle and Lower Reaches of Yangtze River), Ministry of Agriculture and Rural Affairs, Wuhan, 430070, China
| | - Tao Ren
- Microelement Research Center, Huazhong Agricultural University, Wuhan, 430070, China
- Key Laboratory of Arable Land Conservation (Middle and Lower Reaches of Yangtze River), Ministry of Agriculture and Rural Affairs, Wuhan, 430070, China
| | - Xiaokun Li
- Microelement Research Center, Huazhong Agricultural University, Wuhan, 430070, China
- Key Laboratory of Arable Land Conservation (Middle and Lower Reaches of Yangtze River), Ministry of Agriculture and Rural Affairs, Wuhan, 430070, China
| | - Rihuan Cong
- Microelement Research Center, Huazhong Agricultural University, Wuhan, 430070, China
- Key Laboratory of Arable Land Conservation (Middle and Lower Reaches of Yangtze River), Ministry of Agriculture and Rural Affairs, Wuhan, 430070, China
| | - Zhifeng Lu
- Microelement Research Center, Huazhong Agricultural University, Wuhan, 430070, China
- Key Laboratory of Arable Land Conservation (Middle and Lower Reaches of Yangtze River), Ministry of Agriculture and Rural Affairs, Wuhan, 430070, China
| | - Ismail Cakmak
- Faculty of Engineering and Natural Sciences, Sabanci University, Istanbul, 34956, Turkey
| | - Jianwei Lu
- Microelement Research Center, Huazhong Agricultural University, Wuhan, 430070, China
- Key Laboratory of Arable Land Conservation (Middle and Lower Reaches of Yangtze River), Ministry of Agriculture and Rural Affairs, Wuhan, 430070, China
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11
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Cantrell M, Ware MA, Peers G. Characterizing compensatory mechanisms in the absence of photoprotective qE in Chlamydomonas reinhardtii. PHOTOSYNTHESIS RESEARCH 2023; 158:23-39. [PMID: 37488319 DOI: 10.1007/s11120-023-01037-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/25/2022] [Accepted: 06/26/2023] [Indexed: 07/26/2023]
Abstract
Rapid fluctuations in the quantity and quality of natural light expose photosynthetic organisms to conditions when the capacity to utilize absorbed quanta is insufficient. These conditions can result in the production of reactive oxygen species and photooxidative damage. Non-photochemical quenching (NPQ) and alternative electron transport are the two most prominent mechanisms which synergistically function to minimize the overreduction of photosystems. In the green alga Chlamydomonas reinhardtii, the stress-related light-harvesting complex (LHCSR) is a required component for the rapid induction and relaxation of NPQ in the light-harvesting antenna. Here, we use simultaneous chlorophyll fluorescence and oxygen exchange measurements to characterize the acclimation of the Chlamydomonas LHCSR-less mutant (npq4lhcsr1) to saturating light conditions. We demonstrate that, in the absence of NPQ, Chlamydomonas does not acclimate to sinusoidal light through increased light-dependent oxygen consumption. We also show that the npq4lhcsr1 mutant has an increased sink capacity downstream of PSI and this energy flow is likely facilitated by cyclic electron transport. Furthermore, we show that the timing of additions of mitochondrial inhibitors has a major influence on plastid/mitochondrial coupling experiments.
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Affiliation(s)
- Michael Cantrell
- Department of Biology, Colorado State University, Fort Collins, CO, USA
| | - Maxwell A Ware
- Department of Biology, Colorado State University, Fort Collins, CO, USA
| | - Graham Peers
- Department of Biology, Colorado State University, Fort Collins, CO, USA.
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12
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Dumont R, Dowdell J, Song J, Li J, Wang S, Kang W, Li B. Control of charge transport in electronically active systems towards integrated biomolecular circuits (IbC). J Mater Chem B 2023; 11:8302-8314. [PMID: 37464922 DOI: 10.1039/d3tb00701d] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/20/2023]
Abstract
The miniaturization of traditional silicon-based electronics will soon reach its limitation as quantum tunneling and heat become serious problems at the several-nanometer scale. Crafting integrated circuits via self-assembly of electronically active molecules using a "bottom-up" paradigm provides a potential solution to these technological challenges. In particular, integrated biomolecular circuits (IbC) offer promising advantages to achieve this goal, as nature offers countless examples of functionalities entailed by self-assembly and examples of controlling charge transport at the molecular level within the self-assembled structures. To this end, the review summarizes the progress in understanding how charge transport is regulated in biosystems and the key redox-active amino acids that enable the charge transport. In addition, charge transport mechanisms at different length scales are also reviewed, offering key insights for controlling charge transport in IbC in the future.
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Affiliation(s)
- Ryan Dumont
- Department of Mechanical Engineering, Kennesaw State University, Marietta, GA, USA.
| | - Juwaan Dowdell
- Department of Mechanical Engineering, Kennesaw State University, Marietta, GA, USA.
| | - Jisoo Song
- Department of Mechanical Engineering, Kennesaw State University, Marietta, GA, USA.
| | - Jiani Li
- State Key Laboratory of Fine Chemicals, Frontiers Science Centre for Smart Materials Oriented Chemical Engineering, School of Bioengineering, Dalian University of Technology, Dalian, China.
| | - Suwan Wang
- State Key Laboratory of Fine Chemicals, Frontiers Science Centre for Smart Materials Oriented Chemical Engineering, School of Bioengineering, Dalian University of Technology, Dalian, China.
| | - Wei Kang
- State Key Laboratory of Fine Chemicals, Frontiers Science Centre for Smart Materials Oriented Chemical Engineering, School of Bioengineering, Dalian University of Technology, Dalian, China.
- Ningbo Institute of Dalian University of Technology, Ningbo, China
| | - Bo Li
- Department of Mechanical Engineering, Kennesaw State University, Marietta, GA, USA.
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13
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Sun Y, Gu L, Wen J, van der Tol C, Porcar-Castell A, Joiner J, Chang CY, Magney T, Wang L, Hu L, Rascher U, Zarco-Tejada P, Barrett CB, Lai J, Han J, Luo Z. From remotely sensed solar-induced chlorophyll fluorescence to ecosystem structure, function, and service: Part I-Harnessing theory. GLOBAL CHANGE BIOLOGY 2023; 29:2926-2952. [PMID: 36799496 DOI: 10.1111/gcb.16634] [Citation(s) in RCA: 6] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/09/2022] [Accepted: 11/08/2022] [Indexed: 05/03/2023]
Abstract
Solar-induced chlorophyll fluorescence (SIF) is a remotely sensed optical signal emitted during the light reactions of photosynthesis. The past two decades have witnessed an explosion in availability of SIF data at increasingly higher spatial and temporal resolutions, sparking applications in diverse research sectors (e.g., ecology, agriculture, hydrology, climate, and socioeconomics). These applications must deal with complexities caused by tremendous variations in scale and the impacts of interacting and superimposing plant physiology and three-dimensional vegetation structure on the emission and scattering of SIF. At present, these complexities have not been overcome. To advance future research, the two companion reviews aim to (1) develop an analytical framework for inferring terrestrial vegetation structures and function that are tied to SIF emission, (2) synthesize progress and identify challenges in SIF research via the lens of multi-sector applications, and (3) map out actionable solutions to tackle these challenges and offer our vision for research priorities over the next 5-10 years based on the proposed analytical framework. This paper is the first of the two companion reviews, and theory oriented. It introduces a theoretically rigorous yet practically applicable analytical framework. Guided by this framework, we offer theoretical perspectives on three overarching questions: (1) The forward (mechanism) question-How are the dynamics of SIF affected by terrestrial ecosystem structure and function? (2) The inference question: What aspects of terrestrial ecosystem structure, function, and service can be reliably inferred from remotely sensed SIF and how? (3) The innovation question: What innovations are needed to realize the full potential of SIF remote sensing for real-world applications under climate change? The analytical framework elucidates that process complexity must be appreciated in inferring ecosystem structure and function from the observed SIF; this framework can serve as a diagnosis and inference tool for versatile applications across diverse spatial and temporal scales.
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Affiliation(s)
- Ying Sun
- School of Integrative Plant Science, Soil and Crop Sciences Section, Cornell University, Ithaca, New York, USA
| | - Lianhong Gu
- Environmental Sciences Division and Climate Change Science Institute, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA
| | - Jiaming Wen
- School of Integrative Plant Science, Soil and Crop Sciences Section, Cornell University, Ithaca, New York, USA
| | - Christiaan van der Tol
- Affiliation Faculty of Geo-Information Science and Earth Observation (ITC), University of Twente, Enschede, The Netherlands
| | - Albert Porcar-Castell
- Optics of Photosynthesis Laboratory, Institute for Atmospheric and Earth System Research (INAR)/Forest Sciences, Viikki Plant Science Center (ViPS), University of Helsinki, Helsinki, Finland
| | - Joanna Joiner
- National Aeronautics and Space Administration (NASA) Goddard Space Flight Center (GSFC), Greenbelt, Maryland, USA
| | - Christine Y Chang
- US Department of Agriculture, Agricultural Research Service, Adaptive Cropping Systems Laboratory, Beltsville, Maryland, USA
| | - Troy Magney
- Department of Plant Sciences, University of California, Davis, Davis, California, USA
| | - Lixin Wang
- Department of Earth Sciences, Indiana University-Purdue University Indianapolis (IUPUI), Indianapolis, Indiana, USA
| | - Leiqiu Hu
- Department of Atmospheric and Earth Science, University of Alabama in Huntsville, Huntsville, Alabama, USA
| | - Uwe Rascher
- Institute of Bio- and Geosciences, Forschungszentrum Jülich GmbH, Jülich, Germany
| | - Pablo Zarco-Tejada
- School of Agriculture and Food (SAF-FVAS) and Faculty of Engineering and Information Technology (IE-FEIT), University of Melbourne, Melbourne, Victoria, Australia
| | - Christopher B Barrett
- Charles H. Dyson School of Applied Economics and Management, Cornell University, Ithaca, New York, USA
| | - Jiameng Lai
- School of Integrative Plant Science, Soil and Crop Sciences Section, Cornell University, Ithaca, New York, USA
| | - Jimei Han
- School of Integrative Plant Science, Soil and Crop Sciences Section, Cornell University, Ithaca, New York, USA
| | - Zhenqi Luo
- School of Integrative Plant Science, Soil and Crop Sciences Section, Cornell University, Ithaca, New York, USA
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14
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Degen GE, Jackson PJ, Proctor MS, Zoulias N, Casson SA, Johnson MP. High cyclic electron transfer via the PGR5 pathway in the absence of photosynthetic control. PLANT PHYSIOLOGY 2023; 192:370-386. [PMID: 36774530 PMCID: PMC10152662 DOI: 10.1093/plphys/kiad084] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/25/2022] [Accepted: 01/24/2023] [Indexed: 05/03/2023]
Abstract
The light reactions of photosynthesis couple electron and proton transfers across the thylakoid membrane, generating NADPH, and proton motive force (pmf) that powers the endergonic synthesis of ATP by ATP synthase. ATP and NADPH are required for CO2 fixation into carbohydrates by the Calvin-Benson-Bassham cycle. The dominant ΔpH component of the pmf also plays a photoprotective role in regulating photosystem II light harvesting efficiency through nonphotochemical quenching (NPQ) and photosynthetic control via electron transfer from cytochrome b6f (cytb6f) to photosystem I. ΔpH can be adjusted by increasing the proton influx into the thylakoid lumen via upregulation of cyclic electron transfer (CET) or decreasing proton efflux via downregulation of ATP synthase conductivity (gH+). The interplay and relative contributions of these two elements of ΔpH control to photoprotection are not well understood. Here, we showed that an Arabidopsis (Arabidopsis thaliana) ATP synthase mutant hunger for oxygen in photosynthetic transfer reaction 2 (hope2) with 40% higher proton efflux has supercharged CET. Double crosses of hope2 with the CET-deficient proton gradient regulation 5 and ndh-like photosynthetic complex I lines revealed that PROTON GRADIENT REGULATION 5 (PGR5)-dependent CET is the major pathway contributing to higher proton influx. PGR5-dependent CET allowed hope2 to maintain wild-type levels of ΔpH, CO2 fixation and NPQ, however photosynthetic control remained absent and PSI was prone to photoinhibition. Therefore, high CET in the absence of ATP synthase regulation is insufficient for PSI photoprotection.
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Affiliation(s)
- Gustaf E Degen
- Plants, Photosynthesis and Soil, School of Biosciences, University of Sheffield, Firth Court, Western Bank, Sheffield S10 2TN, UK
| | - Philip J Jackson
- Plants, Photosynthesis and Soil, School of Biosciences, University of Sheffield, Firth Court, Western Bank, Sheffield S10 2TN, UK
- Department of Chemical and Biological Engineering, University of Sheffield, Sheffield S1 4NL, UK
| | - Matthew S Proctor
- Plants, Photosynthesis and Soil, School of Biosciences, University of Sheffield, Firth Court, Western Bank, Sheffield S10 2TN, UK
| | - Nicholas Zoulias
- Plants, Photosynthesis and Soil, School of Biosciences, University of Sheffield, Firth Court, Western Bank, Sheffield S10 2TN, UK
| | - Stuart A Casson
- Plants, Photosynthesis and Soil, School of Biosciences, University of Sheffield, Firth Court, Western Bank, Sheffield S10 2TN, UK
| | - Matthew P Johnson
- Plants, Photosynthesis and Soil, School of Biosciences, University of Sheffield, Firth Court, Western Bank, Sheffield S10 2TN, UK
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15
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Strand DD, Walker BJ. Energetic considerations for engineering novel biochemistries in photosynthetic organisms. FRONTIERS IN PLANT SCIENCE 2023; 14:1116812. [PMID: 36814754 PMCID: PMC9939686 DOI: 10.3389/fpls.2023.1116812] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/05/2022] [Accepted: 01/23/2023] [Indexed: 06/18/2023]
Abstract
Humans have been harnessing biology to make valuable compounds for generations. From beer and biofuels to pharmaceuticals, biology provides an efficient alternative to industrial processes. With the continuing advancement of molecular tools to genetically modify organisms, biotechnology is poised to solve urgent global problems related to environment, increasing population, and public health. However, the light dependent reactions of photosynthesis are constrained to produce a fixed stoichiometry of ATP and reducing equivalents that may not match the newly introduced synthetic metabolism, leading to inefficiency or damage. While photosynthetic organisms have evolved several ways to modify the ATP/NADPH output from their thylakoid electron transport chain, it is unknown if the native energy balancing mechanisms grant enough flexibility to match the demands of the synthetic metabolism. In this review we discuss the role of photosynthesis in the biotech industry, and the energetic considerations of using photosynthesis to power synthetic biology.
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Affiliation(s)
- Deserah D. Strand
- U. S. Department of Energy (DOE) Plant Research Laboratory, Michigan State University, East Lansing, MI, United States
| | - Berkley J. Walker
- U. S. Department of Energy (DOE) Plant Research Laboratory, Michigan State University, East Lansing, MI, United States
- Department of Plant Biology, Michigan State University, East Lansing, MI, United States
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16
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Cheng J, Zhang K, Li J, Hou Y. Using δF IP as a potential biomarker for risk assessment of environmental pollutants in aquatic ecosystem: A case study of marine cyanobacterium Synechococcus sp. PCC7002. CHEMOSPHERE 2023; 313:137621. [PMID: 36566796 DOI: 10.1016/j.chemosphere.2022.137621] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/25/2022] [Revised: 12/19/2022] [Accepted: 12/20/2022] [Indexed: 06/17/2023]
Abstract
Increased hazardous substances application causes more environmental pollution and risks for human health. Microalgae are the important biological groups in marine ecosystem, and considered to be sensitive to environmental pollutants. Therefore, toxicity test on marine microalgae could provide the most efficient method for aquatic toxicity assessment, and could also be used as the early warning signals in aquatic ecosystem. In view of this, our study aimed at investigating the toxicity potential of two typical organic compounds, and screening out novel photosynthetic indicators for the risk assessment of environmental pollutants. In this study, benzyl alcohol and 2-phenylethanol were chosen as the target organic compounds, and preliminary toxicity mechanism of these organic compounds on marine cyanobacterium Synechococcus sp. PCC7002 was investigated with chlorophyll fluorescence technology. Results showed that PCC7002 could be affected by benzyl alcohol or 2-phenylethanol stress, and the toxicity effect was concentration-dependent. And external benzyl alcohol and 2-phenylethanol stress damaged the oxygen evolving complex, and suppressed electron transport at the donor and receptor sides of photosystem II (PSII), influencing the absorption, transfer, and application of light energy. Furthermore, potential biomarkers were screened by half maximal inhibitory concentration (IC50) on the basis of pearson correlation coefficient analysis, and fluorescence intensity difference between the I-step and P-step of OJIP curve (δFIP) seems to be the most sensitive indicator for external stress. This study would be of significant interest to the biomarker community, and pave the way for the practical resource for marine pollution monitoring and assessment.
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Affiliation(s)
- Jie Cheng
- School of Life Sciences, Liaocheng University, Liaocheng, 252000, China; State Key Laboratory of Marine Environmental Science, College of Ocean and Earth Sciences, Xiamen University, Xiamen, 361102, China.
| | - Kaidian Zhang
- State Key Laboratory of Marine Resource Utilization in South China Sea, Hainan Aquaculture Breeding Engineering Research Center, Hainan University, Haikou, 570100, China; State Key Laboratory of Marine Environmental Science, College of Ocean and Earth Sciences, Xiamen University, Xiamen, 361102, China
| | - Jiashun Li
- State Key Laboratory of Marine Environmental Science, College of Ocean and Earth Sciences, Xiamen University, Xiamen, 361102, China
| | - Yuyong Hou
- Key Laboratory of Systems Microbial Biotechnology, Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, 300308, China.
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17
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Zhang S, Zou B, Cao P, Su X, Xie F, Pan X, Li M. Structural insights into photosynthetic cyclic electron transport. MOLECULAR PLANT 2023; 16:187-205. [PMID: 36540023 DOI: 10.1016/j.molp.2022.12.014] [Citation(s) in RCA: 9] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/01/2022] [Revised: 12/17/2022] [Accepted: 12/18/2022] [Indexed: 06/17/2023]
Abstract
During photosynthesis, light energy is utilized to drive sophisticated biochemical chains of electron transfers, converting solar energy into chemical energy that feeds most life on earth. Cyclic electron transfer/flow (CET/CEF) plays an essential role in efficient photosynthesis, as it balances the ATP/NADPH ratio required in various regulatory and metabolic pathways. Photosystem I, cytochrome b6f, and NADH dehydrogenase (NDH) are large multisubunit protein complexes embedded in the thylakoid membrane of the chloroplast and key players in NDH-dependent CEF pathway. Furthermore, small mobile electron carriers serve as shuttles for electrons between these membrane protein complexes. Efficient electron transfer requires transient interactions between these electron donors and acceptors. Structural biology has been a powerful tool to advance our knowledge of this important biological process. A number of structures of the membrane-embedded complexes, soluble electron carrier proteins, and transient complexes composed of both have now been determined. These structural data reveal detailed interacting patterns of these electron donor-acceptor pairs, thus allowing us to visualize the different parts of the electron transfer process. This review summarizes the current state of structural knowledge of three membrane complexes and their interaction patterns with mobile electron carrier proteins.
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Affiliation(s)
- Shumeng Zhang
- National Laboratory of Biomacromolecules, CAS Center for Excellence in Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing, China
| | - Baohua Zou
- National Laboratory of Biomacromolecules, CAS Center for Excellence in Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing, China; University of Chinese Academy of Sciences, Beijing, China
| | - Peng Cao
- Faculty of Environment and Life, Beijing University of Technology, Beijing, China
| | - Xiaodong Su
- National Laboratory of Biomacromolecules, CAS Center for Excellence in Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing, China; University of Chinese Academy of Sciences, Beijing, China
| | - Fen Xie
- National Laboratory of Biomacromolecules, CAS Center for Excellence in Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing, China; University of Chinese Academy of Sciences, Beijing, China
| | - Xiaowei Pan
- College of Life Science, Capital Normal University, Beijing, China
| | - Mei Li
- National Laboratory of Biomacromolecules, CAS Center for Excellence in Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing, China.
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18
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Thiers KLL, da Silva JHM, Vasconcelos DCA, Aziz S, Noceda C, Arnholdt-Schmitt B, Costa JH. Polymorphisms in alternative oxidase genes from ecotypes of Arabidopsis and rice revealed an environment-induced linkage to altitude and rainfall. PHYSIOLOGIA PLANTARUM 2023; 175:e13847. [PMID: 36562612 DOI: 10.1111/ppl.13847] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/16/2021] [Revised: 12/07/2022] [Accepted: 12/19/2022] [Indexed: 06/17/2023]
Abstract
We investigated SNPs in alternative oxidase (AOX) genes and their connection to ecotype origins (climate, altitude, and rainfall) by using genomic data sets of Arabidopsis and rice populations from 1190 and 90 ecotypes, respectively. Parameters were defined to detect non-synonymous SNPs in the AOX ORF, which revealed amino acid (AA) changes in AOX1c, AOX1d, and AOX2 from Arabidopsis and AOX1c from rice in comparison to AOX references from Columbia-0 and Japonica ecotypes, respectively. Among these AA changes, Arabidopsis AOX1c_A161E&G165R and AOX1c_R242S revealed a link to high rainfall and high altitude, respectively, while all other changes in Arabidopsis and rice AOX was connected to high altitude and rainfall. Comparative 3D modeling showed that all mutant AOX presented structural differences in relation to the respective references. Molecular docking analysis uncovered lower binding affinity values between AOX and the substrate ubiquinol for most of the identified structures compared to their reference, indicating better enzyme-substrate binding affinities. Thus, our in silico data suggest that the majority of the AA changes found in the available ecotypes will confer better enzyme-subtract interactions and thus indicate environment-related, more efficient AOX activity.
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Affiliation(s)
- Karine Leitão Lima Thiers
- Functional Genomics and Bioinformatics, Department of Biochemistry and Molecular Biology, Federal University of Ceara, Fortaleza, Brazil
- Non-Institutional Competence Focus (NICFocus) 'Functional Cell Reprogramming and Organism Plasticity' (FunCROP), coordinated from Foros de Vale de Figueira, Alentejo, Portugal
| | | | | | - Shahid Aziz
- Functional Genomics and Bioinformatics, Department of Biochemistry and Molecular Biology, Federal University of Ceara, Fortaleza, Brazil
- Non-Institutional Competence Focus (NICFocus) 'Functional Cell Reprogramming and Organism Plasticity' (FunCROP), coordinated from Foros de Vale de Figueira, Alentejo, Portugal
| | - Carlos Noceda
- Non-Institutional Competence Focus (NICFocus) 'Functional Cell Reprogramming and Organism Plasticity' (FunCROP), coordinated from Foros de Vale de Figueira, Alentejo, Portugal
- Cell and Molecular Biology of Plants (BIOCEMP)/Industrial Biotechnology and Bioproducts, Departamento de Ciencias de la Vida y de la Agricultura, Universidad de las Fuerzas Armadas-ESPE, Sangolquí, Ecuador
- Facultad de Ciencias de la ingeniería, Universidad Estatal de Milagro, Milagro, Ecuador
| | - Birgit Arnholdt-Schmitt
- Functional Genomics and Bioinformatics, Department of Biochemistry and Molecular Biology, Federal University of Ceara, Fortaleza, Brazil
- Non-Institutional Competence Focus (NICFocus) 'Functional Cell Reprogramming and Organism Plasticity' (FunCROP), coordinated from Foros de Vale de Figueira, Alentejo, Portugal
| | - José Hélio Costa
- Functional Genomics and Bioinformatics, Department of Biochemistry and Molecular Biology, Federal University of Ceara, Fortaleza, Brazil
- Non-Institutional Competence Focus (NICFocus) 'Functional Cell Reprogramming and Organism Plasticity' (FunCROP), coordinated from Foros de Vale de Figueira, Alentejo, Portugal
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19
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Sandoval-Gil JM, Ruiz JM, Marín-Guirao L. Advances in understanding multilevel responses of seagrasses to hypersalinity. MARINE ENVIRONMENTAL RESEARCH 2023; 183:105809. [PMID: 36435174 DOI: 10.1016/j.marenvres.2022.105809] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/22/2022] [Revised: 11/07/2022] [Accepted: 11/08/2022] [Indexed: 06/16/2023]
Abstract
Human- and nature-induced hypersaline conditions in coastal systems can lead to profound alterations of the structure and vitality of seagrass meadows and their socio-ecological benefits. In the last two decades, recent research efforts (>50 publications) have contributed significantly to unravel the physiological basis underlying the seagrass-hypersalinity interactions, although most (∼70%) are limited to few species (e.g. Posidonia oceanica, Zostera marina, Thalassia testudinum, Cymodocea nodosa). Variables related to photosynthesis and carbon metabolism are among the most prevalent in the literature, although other key metabolic processes such as plant water relations and responses at molecular (i.e. gene expression) and ultrastructure level are attracting attention. This review emphasises all these latest insights, offering an integrative perspective on the interplay among biological responses across different functional levels (from molecular to clonal structure), and their interaction with biotic/abiotic factors including those related to climate change. Other issues such as the role of salinity in driving the evolutionary trajectory of seagrasses, their acclimation mechanisms to withstand salinity increases or even the adaptive properties of populations that have historically lived under hypersaline conditions are also included. The pivotal role of the costs and limits of phenotypic plasticity in the successful acclimation of marine plants to hypersalinity is also discussed. Finally, some lines of research are proposed to fill the remaining knowledge gaps.
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Affiliation(s)
- Jose Miguel Sandoval-Gil
- Universidad Autónoma de Baja California (UABC), Instituto de Investigaciones Oceanológicas (IIO), Marine Botany Research Group, Ensenada, Baja California, 22860, Mexico
| | - Juan M Ruiz
- Seagrass Ecology Group, Spanish Institute of Oceanography (IEO-CSIC), C/ Varadero s/n, 30740 San Pedro del Pinatar, Murcia, Spain
| | - Lázaro Marín-Guirao
- Seagrass Ecology Group, Spanish Institute of Oceanography (IEO-CSIC), C/ Varadero s/n, 30740 San Pedro del Pinatar, Murcia, Spain.
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20
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Penzler JF, Marino G, Reiter B, Kleine T, Naranjo B, Leister D. Commonalities and specialties in photosynthetic functions of PROTON GRADIENT REGULATION5 variants in Arabidopsis. PLANT PHYSIOLOGY 2022; 190:1866-1882. [PMID: 35946785 PMCID: PMC9614465 DOI: 10.1093/plphys/kiac362] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/19/2022] [Accepted: 07/13/2022] [Indexed: 05/19/2023]
Abstract
The PROTON GRADIENT REGULATION5 (PGR5) protein is required for trans-thylakoid proton gradient formation and acclimation to fluctuating light (FL). PGR5 functionally interacts with two other thylakoid proteins, PGR5-like 1 (PGRL1) and 2 (PGRL2); however, the molecular details of these interactions are largely unknown. In the Arabidopsis (Arabidopsis thaliana) pgr5-1 mutant, the PGR5G130S protein accumulates in only small amounts. In this work, we generated a knockout allele of PGR5 (pgr5-Cas) using CRISPR-Cas9 technology. Like pgr5-1, pgr5-Cas is seedling-lethal under FL, but photosynthesis and particularly cyclic electron flow, as well as chlorophyll content, are less severely affected in both pgr5-Cas and pgrl1ab (which lacks PGRL1 and PGR5) than in pgr5-1. These differences are associated with changes in the levels of 260 proteins, including components of the Calvin-Benson cycle, photosystems II and I, and the NDH complex, in pgr5-1 relative to the wild type (WT), pgr5-Cas, and pgrl1ab. Some of the differences between pgr5-1 and the other mutant lines could be tentatively assigned to second-site mutations in the pgr5-1 line, identified by whole-genome sequencing. However, others, particularly the more pronounced photosynthetic defects and PGRL1 depletion (compared to pgr5-Cas), are clearly due to specific negative effects of the amino-acid substitution in PGR5G130S, as demonstrated by complementation analysis. Moreover, pgr5-1 and pgr5-Cas plants are less tolerant to long-term exposure to high light than pgrl1ab plants. These results imply that, in addition to the previously reported necessity of PGRL1 for optimal PGR5 function, PGR5 is required alongside PGRL1 to avoid harmful effects on plant performance.
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Affiliation(s)
| | | | - Bennet Reiter
- Plant Molecular Biology, Faculty of Biology, Ludwig-Maximilians-Universität München, D-82152 Planegg-Martinsried, Germany
| | - Tatjana Kleine
- Plant Molecular Biology, Faculty of Biology, Ludwig-Maximilians-Universität München, D-82152 Planegg-Martinsried, Germany
| | | | - Dario Leister
- Plant Molecular Biology, Faculty of Biology, Ludwig-Maximilians-Universität München, D-82152 Planegg-Martinsried, Germany
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21
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Lazár D, Niu Y, Nedbal L. Insights on the regulation of photosynthesis in pea leaves exposed to oscillating light. JOURNAL OF EXPERIMENTAL BOTANY 2022; 73:6380-6393. [PMID: 36036782 PMCID: PMC9578350 DOI: 10.1093/jxb/erac283] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/28/2022] [Accepted: 08/26/2022] [Indexed: 06/15/2023]
Abstract
Plants growing in nature often experience fluctuating irradiance. However, in the laboratory, the dynamics of photosynthesis are usually explored by instantaneously exposing dark-adapted plants to constant light and examining the dark-to-light transition, which is a poor approximation of natural phenomena. With the aim creating a better approximation, we exposed leaves of pea (Pisum sativum) to oscillating light and measured changes in the functioning of PSI and PSII, and of the proton motive force at the thylakoid membrane. We found that the dynamics depended on the oscillation period, revealing information about the underlying regulatory networks. As demonstrated for a selected oscillation period of 60 s, the regulation tries to keep the reaction centers of PSI and PSII open. We present an evaluation of the data obtained, and discuss the involvement of particular processes in the regulation of photosynthesis. The forced oscillations provided an information-rich fingerprint of complex regulatory networks. We expect future progress in understanding these networks from experiments involving chemical interventions and plant mutants, and by using mathematical modeling and systems identification and control tools.
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Affiliation(s)
- Dušan Lazár
- Department of Biophysics, Faculty of Science, Palacký University, Šlechtitelů 27, 783 71 Olomouc, Czech Republic
| | - Yuxi Niu
- Institute of Bio- and Geosciences/Plant Sciences (IBG-2), Forschungszentrum Jülich, Wilhelm-Johnen-Straße, D-52428 Jülich, Germany
| | - Ladislav Nedbal
- Department of Biophysics, Faculty of Science, Palacký University, Šlechtitelů 27, 783 71 Olomouc, Czech Republic
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22
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Gu L, Grodzinski B, Han J, Marie T, Zhang Y, Song YC, Sun Y. Granal thylakoid structure and function: explaining an enduring mystery of higher plants. THE NEW PHYTOLOGIST 2022; 236:319-329. [PMID: 35832001 PMCID: PMC9805053 DOI: 10.1111/nph.18371] [Citation(s) in RCA: 14] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/19/2022] [Accepted: 07/07/2022] [Indexed: 05/11/2023]
Abstract
In higher plants, photosystems II and I are found in grana stacks and unstacked stroma lamellae, respectively. To connect them, electron carriers negotiate tortuous multi-media paths and are subject to macromolecular blocking. Why does evolution select an apparently unnecessary, inefficient bipartition? Here we systematically explain this perplexing phenomenon. We propose that grana stacks, acting like bellows in accordions, increase the degree of ultrastructural control on photosynthesis through thylakoid swelling/shrinking induced by osmotic water fluxes. This control coordinates with variations in stomatal conductance and the turgor of guard cells, which act like an accordion's air button. Thylakoid ultrastructural dynamics regulate macromolecular blocking/collision probability, direct diffusional pathlengths, division of function of Cytochrome b6 f complex between linear and cyclic electron transport, luminal pH via osmotic water fluxes, and the separation of pH dynamics between granal and lamellar lumens in response to environmental variations. With the two functionally asymmetrical photosystems located distantly from each other, the ultrastructural control, nonphotochemical quenching, and carbon-reaction feedbacks maximally cooperate to balance electron transport with gas exchange, provide homeostasis in fluctuating light environments, and protect photosystems in drought. Grana stacks represent a dry/high irradiance adaptation of photosynthetic machinery to improve fitness in challenging land environments. Our theory unifies many well-known but seemingly unconnected phenomena of thylakoid structure and function in higher plants.
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Affiliation(s)
- Lianhong Gu
- Environmental Sciences Division and Climate Change Science InstituteOak Ridge National LaboratoryOak RidgeTN37831USA
| | - Bernard Grodzinski
- Department of Plant AgricultureUniversity of GuelphGuelphONN1G 2W1Canada
| | - Jimei Han
- School of Integrative Plant ScienceCornell UniversityIthacaNY14853USA
| | - Telesphore Marie
- Department of Plant AgricultureUniversity of GuelphGuelphONN1G 2W1Canada
| | | | - Yang C. Song
- Department of Hydrology and Atmospheric SciencesUniversity of ArizonaTucsonAZ85721USA
| | - Ying Sun
- School of Integrative Plant ScienceCornell UniversityIthacaNY14853USA
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23
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Physiological and Proteomic Responses of Cassava to Short-Term Extreme Cool and Hot Temperature. PLANTS 2022; 11:plants11172307. [PMID: 36079689 PMCID: PMC9460903 DOI: 10.3390/plants11172307] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/07/2022] [Revised: 08/26/2022] [Accepted: 08/31/2022] [Indexed: 11/17/2022]
Abstract
Temperature is one of the most critical factors affecting cassava metabolism and growth. This research was conducted to investigate the effects of short-term exposure to extreme cool (15 °C) and hot (45 °C) temperature on photosynthesis, biochemical and proteomics changes in potted plants of two cassava cultivars, namely Rayong 9 and Kasetsart 50. One-month-old plants were exposed to 15, 30, and 45 °C for 60 min in a temperature chamber under light intensity of 700 μmol m−2 s−1. Compared to the optimum temperature (30 °C), exposure to 15 °C resulted in 28% reduction in stomatal conductance (gs) and 62% reduction in net photosynthesis rate (Pn). In contrast, gs under 45 °C increased 2.61 folds, while Pn was reduced by 50%. The lower Pn but higher electron transport rate (ETR) of the cold-stressed plants indicated that a greater proportion of electrons was transported via alternative pathways to protect chloroplast from being damaged by reactive oxygen species (ROS). Moreover, malondialdehyde (MDA) contents, a marker related to the amount of ROS, were significantly higher at low temperature. Proteomics analysis revealed some interesting differentially expressed proteins (DEPs) including annexin, a multi-functional protein functioning in early events of heat stress signaling. In response to low-temperature stress, AP2/ERF domain-containing protein (a cold-related transcription factor) and glutaredoxin domain-containing protein (a component of redox signaling network under cold stress) were detected. Taken together, both cultivars were more sensitive to low than high temperature. Moreover, Rayong 9 displayed higher Pn under both temperature stresses, and was more efficient in controlling ROS under cold stress than Kasetsart 50.
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24
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Smolinski SL, Lubner CE, Guo Z, Artz JH, Brown KA, Mulder DW, King PW. The influence of electron utilization pathways on photosystem I photochemistry in Synechocystis sp. PCC 6803. RSC Adv 2022; 12:14655-14664. [PMID: 35702219 PMCID: PMC9109680 DOI: 10.1039/d2ra01295b] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/25/2022] [Accepted: 05/06/2022] [Indexed: 01/24/2023] Open
Abstract
The capacity of cyanobacteria to adapt to highly dynamic photon flux and nutrient availability conditions results from controlled management and use of reducing power, and is a major contributing factor to the efficiency of photosynthesis in aquatic environments. The response to changing conditions includes modulating gene expression and protein-protein interactions that serve to adjust the use of electron flux and mechanisms that control photosynthetic electron transport (PET). In this regard, the photochemical activity of photosystem I (PSI) reaction centers can support balancing of cyclic (CEF) and linear electron flow (LEF), and the coupling of redox carriers for use by electron utilization pathways. Therefore, changes in the utilization of reducing power might be expected to result in compensating changes at PSI as a means to support balance of electron flux. To understand this functional relationship, we investigated the properties of PSI and its photochemical activity in cells that lack flavodiiron 1 catalyzed oxygen reduction activity (ORR1). In the absence of ORR1, the oxygen evolution and consumption rates declined together with a shift in the oligomeric form of PSI towards monomers. The effect of these changes on PSI energy and electron transfer properties was examined in isolated trimer and monomer fractions of PSI reaction centers. Collectively, the results demonstrate that PSI photochemistry is modulated through coordination with the depletion of electron demand in the absence of ORR1.
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Affiliation(s)
- Sharon L. Smolinski
- National Renewable Energy Laboratory15013 Denver West ParkwayGoldenCO80401USA
| | - Carolyn E. Lubner
- National Renewable Energy Laboratory15013 Denver West ParkwayGoldenCO80401USA
| | - Zhanjun Guo
- National Renewable Energy Laboratory15013 Denver West ParkwayGoldenCO80401USA
| | - Jacob H. Artz
- National Renewable Energy Laboratory15013 Denver West ParkwayGoldenCO80401USA
| | - Katherine A. Brown
- National Renewable Energy Laboratory15013 Denver West ParkwayGoldenCO80401USA
| | - David W. Mulder
- National Renewable Energy Laboratory15013 Denver West ParkwayGoldenCO80401USA
| | - Paul W. King
- National Renewable Energy Laboratory15013 Denver West ParkwayGoldenCO80401USA
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25
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Dao O, Kuhnert F, Weber APM, Peltier G, Li-Beisson Y. Physiological functions of malate shuttles in plants and algae. TRENDS IN PLANT SCIENCE 2022; 27:488-501. [PMID: 34848143 DOI: 10.1016/j.tplants.2021.11.007] [Citation(s) in RCA: 21] [Impact Index Per Article: 10.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/25/2021] [Revised: 11/02/2021] [Accepted: 11/04/2021] [Indexed: 06/13/2023]
Abstract
Subcellular compartmentalization confers evolutionary advantage to eukaryotic cells but entails the need for efficient interorganelle communication. Malate functions as redox carrier and metabolic intermediate. It can be shuttled across membranes through translocators. The interconversion of malate and oxaloacetate mediated by malate dehydrogenases requires oxidation/reduction of NAD(P)H/NAD(P)+; therefore, malate trafficking serves to transport reducing equivalents and this is termed the 'malate shuttle'. Although the term 'malate shuttle' was coined more than 50 years ago, novel functions are still emerging. This review highlights recent findings on the functions of malate shuttles in photorespiration, fatty acid β-oxidation, interorganelle signaling and its putative role in CO2-concentrating mechanisms. We compare and contrast knowledge in plants and algae, thereby providing an evolutionary perspective on redox trafficking in photosynthetic eukaryotes.
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Affiliation(s)
- Ousmane Dao
- Aix Marseille Univ, CEA, CNRS, BIAM, Institut de Biosciences et Biotechnologies Aix-Marseille, CEA Cadarache, Saint Paul-Lez-Durance 13108, France
| | - Franziska Kuhnert
- Institute of Plant Biochemistry, Cluster of Excellence on Plant Science (CEPLAS), Heinrich Heine University, 40225 Düsseldorf, Germany
| | - Andreas P M Weber
- Institute of Plant Biochemistry, Cluster of Excellence on Plant Science (CEPLAS), Heinrich Heine University, 40225 Düsseldorf, Germany
| | - Gilles Peltier
- Aix Marseille Univ, CEA, CNRS, BIAM, Institut de Biosciences et Biotechnologies Aix-Marseille, CEA Cadarache, Saint Paul-Lez-Durance 13108, France
| | - Yonghua Li-Beisson
- Aix Marseille Univ, CEA, CNRS, BIAM, Institut de Biosciences et Biotechnologies Aix-Marseille, CEA Cadarache, Saint Paul-Lez-Durance 13108, France.
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26
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Blanco NE, Gollan PJ, Mengin V, Nikkanen L, Fusari CM. Editorial: A Novel Perspective for Photosystem I: An Emerging Hub for the Functional Integration of Photosynthesis and Metabolism. FRONTIERS IN PLANT SCIENCE 2022; 13:871623. [PMID: 35498689 PMCID: PMC9039663 DOI: 10.3389/fpls.2022.871623] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/08/2022] [Accepted: 03/14/2022] [Indexed: 06/14/2023]
Affiliation(s)
- Nicolás E. Blanco
- Centre of Photosynthetic and Biochemical Studies (CEFOBI-CONICET-UNR), Rosario, Argentina
| | - Peter J. Gollan
- Molecular Plant Biology, Department of Life Technologies, University of Turku, Turku, Finland
| | - Virginie Mengin
- Schools of Life Sciences, University of Essex, Colchester, United Kingdom
| | - Lauri Nikkanen
- Molecular Plant Biology, Department of Life Technologies, University of Turku, Turku, Finland
| | - Corina M. Fusari
- Centre of Photosynthetic and Biochemical Studies (CEFOBI-CONICET-UNR), Rosario, Argentina
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27
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Yang YJ, Shi Q, Sun H, Mei RQ, Huang W. Differential Response of the Photosynthetic Machinery to Fluctuating Light in Mature and Young Leaves of Dendrobium officinale. FRONTIERS IN PLANT SCIENCE 2022; 12:829783. [PMID: 35185969 PMCID: PMC8850366 DOI: 10.3389/fpls.2021.829783] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/06/2021] [Accepted: 12/27/2021] [Indexed: 06/14/2023]
Abstract
A key component of photosynthetic electron transport chain, photosystem I (PSI), is susceptible to the fluctuating light (FL) in angiosperms. Cyclic electron flow (CEF) around PSI and water-water cycle (WWC) are both used by the epiphytic orchid Dendrobium officinale to protect PSI under FL. This study examined whether the ontogenetic stage of leaf has an impact on the photoprotective mechanisms dealing with FL. Thus, chlorophyll fluorescence and P700 signals under FL were measured in D. officinale young and mature leaves. Upon transition from dark to actinic light, a rapid re-oxidation of P700 was observed in mature leaves but disappeared in young leaves, indicating that WWC existed in mature leaves but was lacking in young leaves. After shifting from low to high light, PSI over-reduction was clearly missing in mature leaves. By comparison, young leaves showed a transient PSI over-reduction within the first 30 s, which was accompanied with highly activation of CEF. Therefore, the effect of FL on PSI redox state depends on the leaf ontogenetic stage. In mature leaves, WWC is employed to avoid PSI over-reduction. In young leaves, CEF around PSI is enhanced to compensate for the lack of WWC and thus to prevent an uncontrolled PSI over-reduction induced by FL.
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Affiliation(s)
- Ying-Jie Yang
- Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, China
| | - Qi Shi
- Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, China
- University of Chinese Academy of Sciences, Beijing, China
| | - Hu Sun
- Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, China
- University of Chinese Academy of Sciences, Beijing, China
| | - Ren-Qiang Mei
- Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, China
| | - Wei Huang
- Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, China
- Bio-Innovation Center of DR PLANT, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, China
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28
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Microalgae-Based Fluorimetric Bioassays for Studying Interferences on Photosynthesis Induced by Environmentally Relevant Concentrations of the Herbicide Diuron. BIOSENSORS 2022; 12:bios12020067. [PMID: 35200329 PMCID: PMC8869104 DOI: 10.3390/bios12020067] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/27/2021] [Revised: 01/15/2022] [Accepted: 01/19/2022] [Indexed: 11/28/2022]
Abstract
The widespread agricultural use of the phenylurea herbicide Diuron (DCMU) requires the investigation of ecotoxicological risk in freshwater and soil ecosystems in light of potential effects on non-target primary producers and a heavier effect on higher trophic levels. We used microalgae-based fluorimetric bioassays for studying the interferences on the photosynthesis of a freshwater and soil model green microalga (Chlamydomonas reinhardtii) induced by environmentally relevant concentrations of the herbicide DCMU. Measurements of steady-state chlorophyll a (Chl-a) fluorescence emission spectra were performed; as well, the kinetics of the Chl-a fluorescence transient were recorded. Percentage indexes of interference on photosynthesis were calculated after comparison of steady-state and kinetic Chl-a fluorescence measurements of DCMU-exposed and control C. reinhardtii cell suspensions. The results obtained after 30 min exposure to the herbicide DCMU confirmed a significant inhibitory effect of DCMU 2 μg/L, and no significant differences between %ι values for DCMU 0.2 μg/L and 0.02 μg/L exposures. Positive %ε values from kinetic measurements of the Chl-a fluorescence transient confirmed the same interfering effect of 2 μg/L DCMU on PSII photochemistry in the exposed C. reinhardtii cell suspensions. Negative values of %ε observed for 0.2 and 0.02 μg/L DCMU exposures could be attributable to a presumptive ‘stimulatory-like’ effect in the photochemistry of photosynthesis. Short-term exposure to sub-μg/L DCMU concentration (≤0.2 μg/L) affects the photosynthetic process of the model microalga C. reinhardtii. Similar environmental exposures could affect natural communities of unicellular autotrophs, with hardly predictable cascading secondary effects on higher trophic levels.
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29
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Wang C, O'Hagan MP, Willner B, Willner I. Bioinspired Artificial Photosynthetic Systems. Chemistry 2021; 28:e202103595. [PMID: 34854505 DOI: 10.1002/chem.202103595] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/05/2021] [Indexed: 12/18/2022]
Abstract
Mimicking photosynthesis using artificial systems, as a means for solar energy conversion and green fuel generation, is one of the holy grails of modern science. This perspective presents recent advances towards developing artificial photosynthetic systems. In one approach, native photosystems are interfaced with electrodes to yield photobioelectrochemical cells that transform light energy into electrical power. This is exemplified by interfacing photosystem I (PSI) and photosystem II (PSII) as an electrically contacted assembly mimicking the native Z-scheme, and by the assembly of an electrically wired PSI/glucose oxidase biocatalytic conjugate on an electrode support. Illumination of the functionalized electrodes led to light-induced generation of electrical power, or to the generation of photocurrents using glucose as the fuel. The second approach introduces supramolecular photosensitizer nucleic acid/electron acceptor complexes as functional modules for effective photoinduced electron transfer stimulating the subsequent biocatalyzed generation of NADPH or the Pt-nanoparticle-catalyzed evolution of molecular hydrogen. Application of the DNA machineries for scaling-up the photosystems is demonstrated. A third approach presents the integration of artificial photosynthetic modules into dynamic nucleic acid networks undergoing reversible reconfiguration or dissipative transient operation in the presence of auxiliary triggers. Control over photoinduced electron transfer reactions and photosynthetic transformations by means of the dynamic networks is demonstrated.
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Affiliation(s)
- Chen Wang
- Institute of Chemistry, The Minerva Centre for Bio-Hybrid Complex Systems, The Hebrew University of Jerusalem, Jerusalem, Israel
| | - Michael P O'Hagan
- Institute of Chemistry, The Minerva Centre for Bio-Hybrid Complex Systems, The Hebrew University of Jerusalem, Jerusalem, Israel
| | - Bilha Willner
- Institute of Chemistry, The Minerva Centre for Bio-Hybrid Complex Systems, The Hebrew University of Jerusalem, Jerusalem, Israel
| | - Itamar Willner
- Institute of Chemistry, The Minerva Centre for Bio-Hybrid Complex Systems, The Hebrew University of Jerusalem, Jerusalem, Israel
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30
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Lima-Melo Y, Kılıç M, Aro EM, Gollan PJ. Photosystem I Inhibition, Protection and Signalling: Knowns and Unknowns. FRONTIERS IN PLANT SCIENCE 2021; 12:791124. [PMID: 34925429 PMCID: PMC8671627 DOI: 10.3389/fpls.2021.791124] [Citation(s) in RCA: 18] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/07/2021] [Accepted: 11/11/2021] [Indexed: 05/22/2023]
Abstract
Photosynthesis is the process that harnesses, converts and stores light energy in the form of chemical energy in bonds of organic compounds. Oxygenic photosynthetic organisms (i.e., plants, algae and cyanobacteria) employ an efficient apparatus to split water and transport electrons to high-energy electron acceptors. The photosynthetic system must be finely balanced between energy harvesting and energy utilisation, in order to limit generation of dangerous compounds that can damage the integrity of cells. Insight into how the photosynthetic components are protected, regulated, damaged, and repaired during changing environmental conditions is crucial for improving photosynthetic efficiency in crop species. Photosystem I (PSI) is an integral component of the photosynthetic system located at the juncture between energy-harnessing and energy consumption through metabolism. Although the main site of photoinhibition is the photosystem II (PSII), PSI is also known to be inactivated by photosynthetic energy imbalance, with slower reactivation compared to PSII; however, several outstanding questions remain about the mechanisms of damage and repair, and about the impact of PSI photoinhibition on signalling and metabolism. In this review, we address the knowns and unknowns about PSI activity, inhibition, protection, and repair in plants. We also discuss the role of PSI in retrograde signalling pathways and highlight putative signals triggered by the functional status of the PSI pool.
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Affiliation(s)
- Yugo Lima-Melo
- Post-graduation Programme in Cellular and Molecular Biology (PPGBCM), Department of Botany, Federal University of Rio Grande do Sul, Porto Alegre, Brazil
| | - Mehmet Kılıç
- Molecular Plant Biology, Department of Life Technologies, University of Turku, Turku, Finland
| | - Eva-Mari Aro
- Molecular Plant Biology, Department of Life Technologies, University of Turku, Turku, Finland
| | - Peter J. Gollan
- Molecular Plant Biology, Department of Life Technologies, University of Turku, Turku, Finland
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31
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Saadat NP, Nies T, van Aalst M, Hank B, Demirtas B, Ebenhöh O, Matuszyńska A. Computational Analysis of Alternative Photosynthetic Electron Flows Linked With Oxidative Stress. FRONTIERS IN PLANT SCIENCE 2021; 12:750580. [PMID: 34745183 PMCID: PMC8569387 DOI: 10.3389/fpls.2021.750580] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/30/2021] [Accepted: 09/21/2021] [Indexed: 06/13/2023]
Abstract
During photosynthesis, organisms respond to their energy demand and ensure the supply of energy and redox equivalents that sustain metabolism. Hence, the photosynthetic apparatus can, and in fact should, be treated as an integrated supply-demand system. Any imbalance in the energy produced and consumed can lead to adverse reactions, such as the production of reactive oxygen species (ROS). Reaction centres of both photosystems are known sites of ROS production. Here, we investigate in particular the central role of Photosystem I (PSI) in this tightly regulated system. Using a computational approach we have expanded a previously published mechanistic model of C3 photosynthesis by including ROS producing and scavenging reactions around PSI. These include two water to water reactions mediated by Plastid terminal oxidase (PTOX) and Mehler and the ascorbate-glutathione (ASC-GSH) cycle, as a main non-enzymatic antioxidant. We have used this model to predict flux distributions through alternative electron pathways under various environmental stress conditions by systematically varying light intensity and enzymatic activity of key reactions. In particular, we studied the link between ROS formation and activation of pathways around PSI as potential scavenging mechanisms. This work shines light on the role of alternative electron pathways in photosynthetic acclimation and investigates the effect of environmental perturbations on PSI activity in the context of metabolic productivity.
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Affiliation(s)
- Nima P. Saadat
- Institute of Quantitative and Theoretical Biology, Heinrich Heine University Düsseldorf, Düsseldorf, Germany
| | - Tim Nies
- Institute of Quantitative and Theoretical Biology, Heinrich Heine University Düsseldorf, Düsseldorf, Germany
| | - Marvin van Aalst
- Institute of Quantitative and Theoretical Biology, Heinrich Heine University Düsseldorf, Düsseldorf, Germany
| | - Brandon Hank
- Institute of Quantitative and Theoretical Biology, Heinrich Heine University Düsseldorf, Düsseldorf, Germany
| | - Büsra Demirtas
- Institute of Quantitative and Theoretical Biology, Heinrich Heine University Düsseldorf, Düsseldorf, Germany
| | - Oliver Ebenhöh
- Institute of Quantitative and Theoretical Biology, Heinrich Heine University Düsseldorf, Düsseldorf, Germany
- CEPLAS - Cluster of Excellence on Plant Sciences, Heinrich Heine University Düsseldorf, Düsseldorf, Germany
| | - Anna Matuszyńska
- Institute of Quantitative and Theoretical Biology, Heinrich Heine University Düsseldorf, Düsseldorf, Germany
- CEPLAS - Cluster of Excellence on Plant Sciences, Heinrich Heine University Düsseldorf, Düsseldorf, Germany
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32
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Krämer M, Kunz HH. Indirect Export of Reducing Equivalents From the Chloroplast to Resupply NADP for C 3 Photosynthesis-Growing Importance for Stromal NAD(H)? FRONTIERS IN PLANT SCIENCE 2021; 12:719003. [PMID: 34745158 PMCID: PMC8564385 DOI: 10.3389/fpls.2021.719003] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/01/2021] [Accepted: 09/23/2021] [Indexed: 05/06/2023]
Abstract
Plant productivity greatly relies on a flawless concerted function of the two photosystems (PS) in the chloroplast thylakoid membrane. While damage to PSII can be rapidly resolved, PSI repair is complex and time-consuming. A major threat to PSI integrity is acceptor side limitation e.g., through a lack of stromal NADP ready to accept electrons from PSI. This situation can occur when oscillations in growth light and temperature result in a drop of CO2 fixation and concomitant NADPH consumption. Plants have evolved a plethora of pathways at the thylakoid membrane but also in the chloroplast stroma to avoid acceptor side limitation. For instance, reduced ferredoxin can be recycled in cyclic electron flow or reducing equivalents can be indirectly exported from the organelle via the malate valve, a coordinated effort of stromal malate dehydrogenases and envelope membrane transporters. For a long time, the NADP(H) was assumed to be the only nicotinamide adenine dinucleotide coenzyme to participate in diurnal chloroplast metabolism and the export of reductants via this route. However, over the last years several independent studies have indicated an underappreciated role for NAD(H) in illuminated leaf plastids. In part, it explains the existence of the light-independent NAD-specific malate dehydrogenase in the stroma. We review the history of the malate valve and discuss the potential role of stromal NAD(H) for the plant survival under adverse growth conditions as well as the option to utilize the stromal NAD(H) pool to mitigate PSI damage.
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Affiliation(s)
| | - Hans-Henning Kunz
- Department I, Plant Biochemistry and Physiology, Ludwig-Maximilians-University Munich, Munich, Germany
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33
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Wakao S, Niyogi KK. Chlamydomonas as a model for reactive oxygen species signaling and thiol redox regulation in the green lineage. PLANT PHYSIOLOGY 2021; 187:687-698. [PMID: 35237823 PMCID: PMC8491031 DOI: 10.1093/plphys/kiab355] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/27/2021] [Accepted: 07/13/2021] [Indexed: 05/15/2023]
Abstract
One-sentence summary: Advances in proteomic and transcriptomic studies have made Chlamydomonas a powerful research model in redox and reactive oxygen species regulation with unique and overlapping mechanisms with plants.
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Affiliation(s)
- Setsuko Wakao
- Division of Molecular Biophysics and Integrated Bioimaging, Lawrence Berkeley National Laboratory, Berkeley, California 94720, USA
- Department of Plant and Microbial Biology, University of California, Berkeley, California 94720, USA
- Author for communication: Senior author
| | - Krishna K. Niyogi
- Division of Molecular Biophysics and Integrated Bioimaging, Lawrence Berkeley National Laboratory, Berkeley, California 94720, USA
- Department of Plant and Microbial Biology, University of California, Berkeley, California 94720, USA
- Howard Hughes Medical Institute, University of California, Berkeley, California 94720, USA
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34
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Wang C, Zhou Z, Ouyang Y, Wang J, Neumann E, Nechushtai R, Willner I. Gated Dissipative Dynamic Artificial Photosynthetic Model Systems. J Am Chem Soc 2021; 143:12120-12128. [PMID: 34338509 DOI: 10.1021/jacs.1c04097] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Abstract
Gated dissipative artificial photosynthetic systems modeling dynamically modulated environmental effects on the photosynthetic apparatus are presented. Two photochemical systems composed of a supramolecular duplex scaffold, a photosensitizer-functionalized strand (photosensitizer is Zn(II)protoporphyrin IX, Zn(II)PPIX, or pyrene), an electron acceptor bipyridinium (V2+)-modified strand, and a nicking enzyme (Nt.BbvCI) act as functional assemblies driving transient photosynthetic-like processes. In the presence of a fuel strand, the transient electron transfer quenching of the photosensitizers, in each of the photochemical systems, is activated. In the presence of a sacrificial electron donor (mercaptoethanol) and continuous irradiation, the resulting electron transfer process in the Zn(II)PPIX/V2+ photochemical module leads to the transient accumulation and depletion of the bipyridinium radical-cation (V·+) product, and in the presence of ferredoxin-NADP+ reductase and NADP+, to the kinetically modulated photosynthesis of NADPH. By subjecting the mixture of two photochemical modules to one of two inhibitors, the gated transient photoinduced electron transfer in the two modules is demonstrated. Such gated dissipative process highlights its potential as an important pathway to protect artificial photosynthetic module against overdose of irradiance and to minimize photodamage.
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Affiliation(s)
- Chen Wang
- Institute of Chemistry, The Minerva Center for Bio-hybrid Complex Systems, The Hebrew University of Jerusalem, Jerusalem 91904, Israel
| | - Zhixin Zhou
- Institute of Chemistry, The Minerva Center for Bio-hybrid Complex Systems, The Hebrew University of Jerusalem, Jerusalem 91904, Israel
| | - Yu Ouyang
- Institute of Chemistry, The Minerva Center for Bio-hybrid Complex Systems, The Hebrew University of Jerusalem, Jerusalem 91904, Israel
| | - Jianbang Wang
- Institute of Chemistry, The Minerva Center for Bio-hybrid Complex Systems, The Hebrew University of Jerusalem, Jerusalem 91904, Israel
| | - Ehud Neumann
- Institute of Life Science, The Hebrew University of Jerusalem, Jerusalem 91904, Israel
| | - Rachel Nechushtai
- Institute of Life Science, The Hebrew University of Jerusalem, Jerusalem 91904, Israel
| | - Itamar Willner
- Institute of Chemistry, The Minerva Center for Bio-hybrid Complex Systems, The Hebrew University of Jerusalem, Jerusalem 91904, Israel
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Cruz JA, Avenson TJ. Photosynthesis: a multiscopic view. JOURNAL OF PLANT RESEARCH 2021; 134:665-682. [PMID: 34170422 DOI: 10.1007/s10265-021-01321-4] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/29/2021] [Accepted: 06/11/2021] [Indexed: 06/13/2023]
Abstract
A recurring analogy for photosynthesis research is the fable of the blind men and the elephant. Photosynthesis has many complex working parts, which has driven the need to study each of them individually, with an inherent understanding that a more complete picture will require systematic integration of these views. However, unlike the blind men, who are limited to using their hands, researchers have developed over the past decades a repertoire of methods for studying these components, many of which capitalize on unique features intrinsic to each. More recent concerns about food security and clean, renewable energy have increased support for applied photosynthesis research, with the idea of either improving photosynthetic performance as a desired trait in select species or using photosynthetic measurements as a phenotyping tool in breeding efforts or for high precision crop management. In this review, we spotlight the migration of approaches for studying photosynthesis from the laboratory into field environments, highlight some recent advances and speculate on areas where further development would be fruitful, with an eye towards how applied photosynthesis research can have impacts at local and global scales.
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Affiliation(s)
- Jeffrey A Cruz
- Plant Research Laboratories, Michigan State University, 612 Wilson Road, MI, S-206, Lansing, USA.
- Department of Biochemistry and Molecular Biology, Michigan State University, Lansing, MI, USA.
| | - Thomas J Avenson
- Department of Plant Sciences, University of Cambridge, CB2 9EW, Cambridge, UK
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PGRL2 triggers degradation of PGR5 in the absence of PGRL1. Nat Commun 2021; 12:3941. [PMID: 34168134 PMCID: PMC8225790 DOI: 10.1038/s41467-021-24107-7] [Citation(s) in RCA: 25] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/01/2020] [Accepted: 06/01/2021] [Indexed: 12/01/2022] Open
Abstract
In plants, inactivation of either of the thylakoid proteins PGR5 and PGRL1 impairs cyclic electron flow (CEF) around photosystem I. Because PGR5 is unstable in the absence of the redox-active PGRL1, but not vice versa, PGRL1 is thought to be essential for CEF. However, we show here that inactivation of PGRL2, a distant homolog of PGRL1, relieves the need for PGRL1 itself. Conversely, high levels of PGRL2 destabilize PGR5 even when PGRL1 is present. In the absence of both PGRL1 and PGRL2, PGR5 alters thylakoid electron flow and impairs plant growth. Consequently, PGR5 can operate in CEF on its own, and is the target of the CEF inhibitor antimycin A, but its activity must be modulated by PGRL1. We conclude that PGRL1 channels PGR5 activity, and that PGRL2 triggers the degradation of PGR5 when the latter cannot productively interact with PGRL1. It is currently thought that the thylakoid proteins PGRL1 and PGR5 form a complex to mediate cyclic electron flow (CEF) around photosystem I. Here the authors show that CEF can in fact be mediated by PGR5 alone and that PGRL1 and the homologous PGRL2 modify the process by modulating PGR5 activity and stability.
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Höhner R, Day PM, Zimmermann SE, Lopez LS, Krämer M, Giavalisco P, Correa Galvis V, Armbruster U, Schöttler MA, Jahns P, Krueger S, Kunz HH. Stromal NADH supplied by PHOSPHOGLYCERATE DEHYDROGENASE3 is crucial for photosynthetic performance. PLANT PHYSIOLOGY 2021; 186:142-167. [PMID: 33779763 PMCID: PMC8154072 DOI: 10.1093/plphys/kiaa117] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/28/2020] [Accepted: 12/17/2020] [Indexed: 05/22/2023]
Abstract
During photosynthesis, electrons travel from light-excited chlorophyll molecules along the electron transport chain to the final electron acceptor nicotinamide adenine dinucleotide phosphate (NADP) to form NADPH, which fuels the Calvin-Benson-Bassham cycle (CBBC). To allow photosynthetic reactions to occur flawlessly, a constant resupply of the acceptor NADP is mandatory. Several known stromal mechanisms aid in balancing the redox poise, but none of them utilizes the structurally highly similar coenzyme NAD(H). Using Arabidopsis (Arabidopsis thaliana) as a C3-model, we describe a pathway that employs the stromal enzyme PHOSPHOGLYCERATE DEHYDROGENASE 3 (PGDH3). We showed that PGDH3 exerts high NAD(H)-specificity and is active in photosynthesizing chloroplasts. PGDH3 withdrew its substrate 3-PGA directly from the CBBC. As a result, electrons become diverted from NADPH via the CBBC into the separate NADH redox pool. pgdh3 loss-of-function mutants revealed an overreduced NADP(H) redox pool but a more oxidized plastid NAD(H) pool compared to wild-type plants. As a result, photosystem I acceptor side limitation increased in pgdh3. Furthermore, pgdh3 plants displayed delayed CBBC activation, changes in nonphotochemical quenching, and altered proton motive force partitioning. Our fluctuating light-stress phenotyping data showed progressing photosystem II damage in pgdh3 mutants, emphasizing the significance of PGDH3 for plant performance under natural light environments. In summary, this study reveals an NAD(H)-specific mechanism in the stroma that aids in balancing the chloroplast redox poise. Consequently, the stromal NAD(H) pool may provide a promising target to manipulate plant photosynthesis.
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Affiliation(s)
- Ricarda Höhner
- School of Biological Sciences, Washington State University, Pullman, WA 99164-4236, USA
| | - Philip M Day
- School of Biological Sciences, Washington State University, Pullman, WA 99164-4236, USA
| | - Sandra E Zimmermann
- Biocenter University of Cologne, Institute for Plant Science, Cologne 50674, Germany
| | - Laura S Lopez
- School of Biological Sciences, Washington State University, Pullman, WA 99164-4236, USA
| | - Moritz Krämer
- School of Biological Sciences, Washington State University, Pullman, WA 99164-4236, USA
| | | | - Viviana Correa Galvis
- Max Planck Institute of Molecular Plant Physiology, Wissenschaftspark Golm, Potsdam 14476, Germany
| | - Ute Armbruster
- Max Planck Institute of Molecular Plant Physiology, Wissenschaftspark Golm, Potsdam 14476, Germany
| | - Mark Aurel Schöttler
- Max Planck Institute of Molecular Plant Physiology, Wissenschaftspark Golm, Potsdam 14476, Germany
| | - Peter Jahns
- Plant Biochemistry, Heinrich-Heine-University Düsseldorf, Düsseldorf D-40225, Germany
| | - Stephan Krueger
- Biocenter University of Cologne, Institute for Plant Science, Cologne 50674, Germany
| | - Hans-Henning Kunz
- School of Biological Sciences, Washington State University, Pullman, WA 99164-4236, USA
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Milrad Y, Schweitzer S, Feldman Y, Yacoby I. Bi-directional electron transfer between H2 and NADPH mitigates light fluctuation responses in green algae. PLANT PHYSIOLOGY 2021; 186:168-179. [PMID: 33793951 PMCID: PMC8154092 DOI: 10.1093/plphys/kiab051] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/04/2021] [Accepted: 01/21/2021] [Indexed: 05/05/2023]
Abstract
The metabolism of green algae has been the focus of much research over the last century. These photosynthetic organisms can thrive under various conditions and adapt quickly to changing environments by concomitant usage of several metabolic apparatuses. The main electron coordinator in their chloroplasts, nicotinamide adenine dinucleotide phosphate (NADPH), participates in many enzymatic activities and is also responsible for inter-organellar communication. Under anaerobic conditions, green algae also accumulate molecular hydrogen (H2), a promising alternative for fossil fuels. However, to scale-up its accumulation, a firm understanding of its integration in the photosynthetic apparatus is still required. While it is generally accepted that NADPH metabolism correlates to H2 accumulation, the mechanism of this collaboration is still vague and relies on indirect measurements. Here, we investigated this connection in Chlamydomonas reinhardtii using simultaneous measurements of both dissolved gases concentration, NADPH fluorescence and electrochromic shifts at 520-546 nm. Our results indicate that energy transfer between H2 and NADPH is bi-directional and crucial for the maintenance of redox balance under light fluctuations. At light onset, NADPH consumption initially eventuates in H2 evolution, which initiates the photosynthetic electron flow. Later on, as illumination continues the majority of NADPH is diverted to the Calvin-Benson-Bassham cycle. Dark onset triggers re-assimilation of H2, which produces NADPH and so, enables initiation of dark fermentative metabolism.
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Affiliation(s)
- Yuval Milrad
- School of Plant Sciences and Food Security, The George S. Wise Faculty of Life Sciences, Tel Aviv University, Ramat Aviv, Tel Aviv 69978, Israel
| | - Shira Schweitzer
- School of Plant Sciences and Food Security, The George S. Wise Faculty of Life Sciences, Tel Aviv University, Ramat Aviv, Tel Aviv 69978, Israel
| | - Yael Feldman
- School of Plant Sciences and Food Security, The George S. Wise Faculty of Life Sciences, Tel Aviv University, Ramat Aviv, Tel Aviv 69978, Israel
| | - Iftach Yacoby
- School of Plant Sciences and Food Security, The George S. Wise Faculty of Life Sciences, Tel Aviv University, Ramat Aviv, Tel Aviv 69978, Israel
- Author for communication: (I.Y.)
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Fernández-Marín B, Roach T, Verhoeven A, García-Plazaola JI. Shedding light on the dark side of xanthophyll cycles. THE NEW PHYTOLOGIST 2021; 230:1336-1344. [PMID: 33452715 DOI: 10.1111/nph.17191] [Citation(s) in RCA: 25] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/06/2020] [Accepted: 01/12/2021] [Indexed: 06/12/2023]
Abstract
Xanthophyll cycles are broadly important in photoprotection, and the reversible de-epoxidation of xanthophylls typically occurs in excess light conditions. However, as presented in this review, compiling evidence in a wide range of photosynthetic eukaryotes shows that xanthophyll de-epoxidation also occurs under diverse abiotic stress conditions in darkness. Light-driven photochemistry usually leads to the pH changes that activate de-epoxidases (e.g. violaxanthin de-epoxidase), but in darkness alternative electron transport pathways and luminal domains enriched in monogalactosyl diacyl glycerol (which enhance de-epoxidase activity) likely enable de-epoxidation. Another 'dark side' to sustaining xanthophyll de-epoxidation is inactivation and/or degradation of epoxidases (e.g. zeaxanthin epoxidase). There are obvious benefits of such activity regarding stress tolerance, and indeed this phenomenon has only been reported in stressful conditions. However, more research is required to unravel the mechanisms and understand the physiological roles of dark-induced formation of zeaxanthin. Notably, the de-epoxidation of violaxanthin to antheraxanthin and zeaxanthin in darkness is still a frequently ignored process, perhaps because it questions a previous paradigm. With that in mind, this review seeks to shed some light on the dark side of xanthophyll de-epoxidation, and point out areas for future work.
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Affiliation(s)
- Beatriz Fernández-Marín
- Department of Botany, Ecology and Plant Physiology, University of La Laguna (ULL), Tenerife, 38200, Spain
| | - Thomas Roach
- Department of Botany, University of Innsbruck and Center for Molecular Biosciences Innsbruck (CMBI), Sternwartestrasse 15, Innsbruck, 6020, Austria
| | - Amy Verhoeven
- Department of Biology, University of St Thomas, 2115 Summit Ave, St Paul, MN, 55105, USA
| | - José Ignacio García-Plazaola
- Department of Plant Biology and Ecology, University of the Basque Country (UPV/EHU), Barrio Sarriena s/n, Leioa, 48940, Spain
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40
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Ferroni L, Brestič M, Živčak M, Cantelli R, Pancaldi S. Increased photosynthesis from a deep-shade to high-light regime occurs by enhanced CO 2 diffusion into the leaf of Selaginella martensii. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2021; 160:143-154. [PMID: 33486204 DOI: 10.1016/j.plaphy.2021.01.012] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/31/2020] [Accepted: 01/11/2021] [Indexed: 06/12/2023]
Abstract
The current understanding of photosynthesis across land plant phylogeny strongly indicates that ancient vascular plants are mainly limited by strong constitutive CO2 diffusional constraints, particularly low stomatal and mesophyll conductance. Considering that the lycophyte Selaginella martensii can demonstrate long-term light acclimation, this study addresses the regulation extent of CO2 assimilation in this species cultivated under contrasting light regimes of deep shade, medium shade and high light. Comparative analyses of photosynthetic traits, CO2 conductance and leaf morpho-anatomy revealed acclimation plasticity similar to that of seed plants, though occurring in the context of an inherently low photosynthetic capacity typical of lycophytes. Specific modulations of the stomatal density and aperture, chloroplast surface exposed to mesophyll airspaces and cell wall thickness sustained a marked improvement in CO2 diffusion from deep shade to high light. However, the maximum carboxylation rate was comparatively less effectively upregulated, leading to a greater incidence of biochemical limitations of photosynthesis. Because of a low carboxylation capacity under any light regime, a lycophyte prevents potential photodamage to the chloroplast by not only exploiting the thermal dissipation of excess absorbed energy but also diverting a large fraction of photosynthetic electrons to sinks alternative to carboxylation.
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Affiliation(s)
- Lorenzo Ferroni
- Department of Life Sciences and Biotechnology, University of Ferrara, Corso Ercole I d'Este 32, 44121, Ferrara, Italy; Department of Plant Physiology, Slovak University of Agriculture, Tr. A. Hlinku 2, 949 01, Nitra, Slovakia.
| | - Marián Brestič
- Department of Plant Physiology, Slovak University of Agriculture, Tr. A. Hlinku 2, 949 01, Nitra, Slovakia.
| | - Marek Živčak
- Department of Plant Physiology, Slovak University of Agriculture, Tr. A. Hlinku 2, 949 01, Nitra, Slovakia
| | - Riccardo Cantelli
- Department of Life Sciences and Biotechnology, University of Ferrara, Corso Ercole I d'Este 32, 44121, Ferrara, Italy
| | - Simonetta Pancaldi
- Department of Life Sciences and Biotechnology, University of Ferrara, Corso Ercole I d'Este 32, 44121, Ferrara, Italy
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Sarewicz M, Pintscher S, Pietras R, Borek A, Bujnowicz Ł, Hanke G, Cramer WA, Finazzi G, Osyczka A. Catalytic Reactions and Energy Conservation in the Cytochrome bc1 and b6f Complexes of Energy-Transducing Membranes. Chem Rev 2021; 121:2020-2108. [PMID: 33464892 PMCID: PMC7908018 DOI: 10.1021/acs.chemrev.0c00712] [Citation(s) in RCA: 61] [Impact Index Per Article: 20.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/07/2020] [Indexed: 12/16/2022]
Abstract
This review focuses on key components of respiratory and photosynthetic energy-transduction systems: the cytochrome bc1 and b6f (Cytbc1/b6f) membranous multisubunit homodimeric complexes. These remarkable molecular machines catalyze electron transfer from membranous quinones to water-soluble electron carriers (such as cytochromes c or plastocyanin), coupling electron flow to proton translocation across the energy-transducing membrane and contributing to the generation of a transmembrane electrochemical potential gradient, which powers cellular metabolism in the majority of living organisms. Cytsbc1/b6f share many similarities but also have significant differences. While decades of research have provided extensive knowledge on these enzymes, several important aspects of their molecular mechanisms remain to be elucidated. We summarize a broad range of structural, mechanistic, and physiological aspects required for function of Cytbc1/b6f, combining textbook fundamentals with new intriguing concepts that have emerged from more recent studies. The discussion covers but is not limited to (i) mechanisms of energy-conserving bifurcation of electron pathway and energy-wasting superoxide generation at the quinol oxidation site, (ii) the mechanism by which semiquinone is stabilized at the quinone reduction site, (iii) interactions with substrates and specific inhibitors, (iv) intermonomer electron transfer and the role of a dimeric complex, and (v) higher levels of organization and regulation that involve Cytsbc1/b6f. In addressing these topics, we point out existing uncertainties and controversies, which, as suggested, will drive further research in this field.
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Affiliation(s)
- Marcin Sarewicz
- Department
of Molecular Biophysics, Faculty of Biochemistry, Biophysics and Biotechnology, Jagiellonian University, 30-387 Kraków, Poland
| | - Sebastian Pintscher
- Department
of Molecular Biophysics, Faculty of Biochemistry, Biophysics and Biotechnology, Jagiellonian University, 30-387 Kraków, Poland
| | - Rafał Pietras
- Department
of Molecular Biophysics, Faculty of Biochemistry, Biophysics and Biotechnology, Jagiellonian University, 30-387 Kraków, Poland
| | - Arkadiusz Borek
- Department
of Molecular Biophysics, Faculty of Biochemistry, Biophysics and Biotechnology, Jagiellonian University, 30-387 Kraków, Poland
| | - Łukasz Bujnowicz
- Department
of Molecular Biophysics, Faculty of Biochemistry, Biophysics and Biotechnology, Jagiellonian University, 30-387 Kraków, Poland
| | - Guy Hanke
- School
of Biological and Chemical Sciences, Queen
Mary University of London, London E1 4NS, U.K.
| | - William A. Cramer
- Department
of Biological Sciences, Purdue University, West Lafayette, Indiana 47907 United States
| | - Giovanni Finazzi
- Laboratoire
de Physiologie Cellulaire et Végétale, Université Grenoble Alpes, Centre National Recherche Scientifique,
Commissariat Energie Atomique et Energies Alternatives, Institut National
Recherche l’agriculture, l’alimentation et l’environnement, 38054 Grenoble Cedex 9, France
| | - Artur Osyczka
- Department
of Molecular Biophysics, Faculty of Biochemistry, Biophysics and Biotechnology, Jagiellonian University, 30-387 Kraków, Poland
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Divergence of photosynthetic strategies amongst marine diatoms. PLoS One 2020; 15:e0244252. [PMID: 33370327 PMCID: PMC7769462 DOI: 10.1371/journal.pone.0244252] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/29/2020] [Accepted: 12/07/2020] [Indexed: 11/19/2022] Open
Abstract
Marine phytoplankton, and in particular diatoms, are responsible for almost half of all primary production on Earth. Diatom species thrive from polar to tropical waters and across light environments that are highly complex to relatively benign, and so have evolved highly divergent strategies for regulating light capture and utilization. It is increasingly well established that diatoms have achieved such successful ecosystem dominance by regulating excitation energy available for generating photosynthetic energy via highly flexible light harvesting strategies. However, how different light harvesting strategies and downstream pathways for oxygen production and consumption interact to balance excitation pressure remains unknown. We therefore examined the responses of three diatom taxa adapted to inherently different light climates (estuarine Thalassioisira weissflogii, coastal Thalassiosira pseudonana and oceanic Thalassiosira oceanica) during transient shifts from a moderate to high growth irradiance (85 to 1200 μmol photons m-2 s-1). Transient high light exposure caused T. weissflogii to rapidly downregulate PSII with substantial nonphotochemical quenching, protecting PSII from inactivation or damage, and obviating the need for induction of O2 consuming (light-dependent respiration, LDR) pathways. In contrast, T. oceanica retained high excitation pressure on PSII, but with little change in RCII photochemical turnover, thereby requiring moderate repair activity and greater reliance on LDR. T. pseudonana exhibited an intermediate response compared to the other two diatom species, exhibiting some downregulation and inactivation of PSII, but high repair of PSII and induction of reversible PSII nonphotochemical quenching, with some LDR. Together, these data demonstrate a range of strategies for balancing light harvesting and utilization across diatom species, which reflect their adaptation to sustain photosynthesis under environments with inherently different light regimes.
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Havaux M. Plastoquinone In and Beyond Photosynthesis. TRENDS IN PLANT SCIENCE 2020; 25:1252-1265. [PMID: 32713776 DOI: 10.1016/j.tplants.2020.06.011] [Citation(s) in RCA: 41] [Impact Index Per Article: 10.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/10/2020] [Revised: 06/24/2020] [Accepted: 06/25/2020] [Indexed: 05/13/2023]
Abstract
Plastoquinone-9 (PQ-9) is an essential component of photosynthesis that carries electrons in the linear and alternative electron transport chains, and is also a redox sensor that regulates state transitions and gene expression. However, a large fraction of the PQ pool is located outside the thylakoid membranes, in the plastoglobules and the chloroplast envelopes, reflecting a wider range of functions beyond electron transport. This review describes new functions of PQ in photoprotection, as a potent antioxidant, and in chloroplast metabolism as a cofactor in the biosynthesis of chloroplast metabolites. It also focuses on the essential need for tight environmental control of PQ biosynthesis and for active exchange of this compound between the thylakoid membranes and the plastoglobules. Through its multiple functions, PQ connects photosynthesis with metabolism, light acclimation, and stress tolerance.
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Affiliation(s)
- Michel Havaux
- Aix-Marseille University, Commissariat à l'Energie Atomique et aux Energies Alternatives (CEA), Centre National de la Recherche Scientifique (CNRS) Unité Mixte de Recherche (UMR) 7265, Biosciences and Biotechnologies Institute of Aix-Marseille, CEA/Cadarache, F-13108 Saint-Paul-lez-Durance, France.
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D'Alessandro S, Beaugelin I, Havaux M. Tanned or Sunburned: How Excessive Light Triggers Plant Cell Death. MOLECULAR PLANT 2020; 13:1545-1555. [PMID: 32992028 DOI: 10.1016/j.molp.2020.09.023] [Citation(s) in RCA: 21] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/25/2020] [Revised: 08/23/2020] [Accepted: 09/24/2020] [Indexed: 06/11/2023]
Abstract
Plants often encounter light intensities exceeding the capacity of photosynthesis (excessive light) mainly due to biotic and abiotic factors, which lower CO2 fixation and reduce light energy sinks. Under excessive light, the photosynthetic electron transport chain generates damaging molecules, hence leading to photooxidative stress and eventually to cell death. In this review, we summarize the mechanisms linking the excessive absorption of light energy in chloroplasts to programmed cell death in plant leaves. We highlight the importance of reactive carbonyl species generated by lipid photooxidation, their detoxification, and the integrating role of the endoplasmic reticulum in the adoption of phototolerance or cell-death pathways. Finally, we invite the scientific community to standardize the conditions of excessive light treatments.
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Affiliation(s)
- Stefano D'Alessandro
- Aix-Marseille University, CEA, CNRS, UMR7265, BIAM, Institute of Biosciences and Biotechnologies of Aix Marseille, 13108 Saint-Paul-lez-Durance, France.
| | - Inès Beaugelin
- Singapore-CEA Alliance for Research in Circular Economy (SCARCE), School of Chemical and Biomedical Engineering, 62 Nanyang Drive, Singapore 637459, Republic of Singapore
| | - Michel Havaux
- Aix-Marseille University, CEA, CNRS, UMR7265, BIAM, Institute of Biosciences and Biotechnologies of Aix Marseille, 13108 Saint-Paul-lez-Durance, France.
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Stirbet A, Lazár D, Guo Y, Govindjee G. Photosynthesis: basics, history and modelling. ANNALS OF BOTANY 2020; 126:511-537. [PMID: 31641747 PMCID: PMC7489092 DOI: 10.1093/aob/mcz171] [Citation(s) in RCA: 91] [Impact Index Per Article: 22.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/08/2019] [Revised: 09/06/2019] [Accepted: 10/21/2019] [Indexed: 05/02/2023]
Abstract
BACKGROUND With limited agricultural land and increasing human population, it is essential to enhance overall photosynthesis and thus productivity. Oxygenic photosynthesis begins with light absorption, followed by excitation energy transfer to the reaction centres, primary photochemistry, electron and proton transport, NADPH and ATP synthesis, and then CO2 fixation (Calvin-Benson cycle, as well as Hatch-Slack cycle). Here we cover some of the discoveries related to this process, such as the existence of two light reactions and two photosystems connected by an electron transport 'chain' (the Z-scheme), chemiosmotic hypothesis for ATP synthesis, water oxidation clock for oxygen evolution, steps for carbon fixation, and finally the diverse mechanisms of regulatory processes, such as 'state transitions' and 'non-photochemical quenching' of the excited state of chlorophyll a. SCOPE In this review, we emphasize that mathematical modelling is a highly valuable tool in understanding and making predictions regarding photosynthesis. Different mathematical models have been used to examine current theories on diverse photosynthetic processes; these have been validated through simulation(s) of available experimental data, such as chlorophyll a fluorescence induction, measured with fluorometers using continuous (or modulated) exciting light, and absorbance changes at 820 nm (ΔA820) related to redox changes in P700, the reaction centre of photosystem I. CONCLUSIONS We highlight here the important role of modelling in deciphering and untangling complex photosynthesis processes taking place simultaneously, as well as in predicting possible ways to obtain higher biomass and productivity in plants, algae and cyanobacteria.
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Affiliation(s)
| | - Dušan Lazár
- Department of Biophysics, Center of the Region Haná for Biotechnological and Agricultural Research, Faculty of Science, Palacký University, Šlechtitelů 27, 783 71 Olomouc, Czech Republic
| | - Ya Guo
- Key Laboratory of Advanced Process Control for Light Industry (Ministry of Education), Jiangnan University, Wuxi, China
- University of Missouri, Columbia, MO, USA
| | - Govindjee Govindjee
- Department of Biochemistry, Department of Plant Biology, and Center of Biophysics & Quantitative Biology, University of Illinois at Urbana-Champaign, Urbana, IL, USA
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Wolf BC, Isaacson T, Tiwari V, Dangoor I, Mufkadi S, Danon A. Redox regulation of PGRL1 at the onset of low light intensity. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2020; 103:715-725. [PMID: 32259361 DOI: 10.1111/tpj.14764] [Citation(s) in RCA: 19] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/20/2019] [Revised: 03/16/2020] [Accepted: 03/24/2020] [Indexed: 05/11/2023]
Abstract
PGR5-LIKE PHOTOSYNTHETIC PHENOTYPE1 (PGRL1) regulates photosystem I cyclic electron flow which transiently activates non-photochemical quenching at the onset of light. Here, we show that a disulfide-based mechanism of PGRL1 regulated this process in vivo at the onset of low light levels. We found that PGRL1 regulation depended on active formation of key regulatory disulfides in the dark, and that PGR5 was required for this activity. The disulfide state of PGRL1 was modulated in plants by counteracting reductive and oxidative components and reached a balanced state that depended on the light level. We propose that the redox regulation of PGRL1 fine-tunes a timely activation of photosynthesis at the onset of low light.
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Affiliation(s)
- Bat-Chen Wolf
- Department of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot, 76100, Israel
| | - Tal Isaacson
- Newe Ya'ar Research Center, Agricultural Research Organization, Ramat Yishay, 30095, Israel
| | - Vivekanand Tiwari
- Department of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot, 76100, Israel
| | - Inbal Dangoor
- Department of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot, 76100, Israel
| | - Sapir Mufkadi
- Department of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot, 76100, Israel
| | - Avihai Danon
- Department of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot, 76100, Israel
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Ueno Y, Shimakawa G, Aikawa S, Miyake C, Akimoto S. Photoprotection mechanisms under different CO 2 regimes during photosynthesis in a green alga Chlorella variabilis. PHOTOSYNTHESIS RESEARCH 2020; 144:397-407. [PMID: 32377933 DOI: 10.1007/s11120-020-00757-4] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/27/2019] [Accepted: 04/23/2020] [Indexed: 05/28/2023]
Abstract
Oxygenic photosynthesis converts light energy into chemical energy via electron transport and assimilates CO2 in the Calvin-Benson cycle with the chemical energy. Thus, high light and low CO2 conditions induce the accumulation of electrons in the photosynthetic electron transport system, resulting in the formation of reactive oxygen species. To prevent the accumulation of electrons, oxygenic photosynthetic organisms have developed photoprotection mechanisms, including non-photochemical quenching (NPQ) and alternative electron flow (AEF). There are diverse molecular mechanisms underlying NPQ and AEF, and the corresponding molecular actors have been identified and characterized using a model green alga Chlamydomonas reinhardtii. In contrast, detailed information about the photoprotection mechanisms is lacking for other green algal species. In the current study, we examined the photoprotection mechanisms responsive to CO2 in the green alga Chlorella variabilis by combining the analyses of pulse-amplitude-modulated fluorescence, O2 evolution, and the steady-state and time-resolved fluorescence spectra. Under the CO2-limited condition, ΔpH-dependent NPQ occurred in photosystems I and II. Moreover, O2-dependent AEF was also induced. Under the CO2-limited condition with carbon supplementation, NPQ was relaxed and light-harvesting chlorophyll-protein complex II was isolated from both photosystems. In C. variabilis, the O2-dependent AEF and the mechanisms that instantly convert the light-harvesting functions of both photosystems may be important for maintaining efficient photosynthetic activities under various CO2 conditions.
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Affiliation(s)
- Yoshifumi Ueno
- Graduate School of Science, Kobe University, Kobe, 657-8501, Japan.
| | - Ginga Shimakawa
- Graduate School of Agricultural Science, Kobe University, Kobe, 657-8501, Japan
- Institute for Integrative Biology of the Cell, CEA, CNRS, Université Paris-Sud, Université Paris-Saclay, 91198, Gif-sur-Yvette cedex, France
| | - Shimpei Aikawa
- Japan International Research Center for Agricultural Sciences, Tsukuba, 305-8686, Japan
| | - Chikahiro Miyake
- Graduate School of Agricultural Science, Kobe University, Kobe, 657-8501, Japan
| | - Seiji Akimoto
- Graduate School of Science, Kobe University, Kobe, 657-8501, Japan.
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Sun C, Xu Y, Hu N, Ma J, Sun S, Cao W, Klobučar G, Hu C, Zhao Y. To evaluate the toxicity of atrazine on the freshwater microalgae Chlorella sp. using sensitive indices indicated by photosynthetic parameters. CHEMOSPHERE 2020; 244:125514. [PMID: 31812061 DOI: 10.1016/j.chemosphere.2019.125514] [Citation(s) in RCA: 58] [Impact Index Per Article: 14.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/18/2019] [Revised: 11/26/2019] [Accepted: 11/28/2019] [Indexed: 06/10/2023]
Abstract
Atrazine is a widely-applied herbicide used primarily to control weeds, which can persist in the ecosystem and exert potential toxicity to phytoplankton in the aquatic environment. In this study, acute toxicity of atrazine on microalgae Chlorella sp. was investigated with different initial cell densities (1 × 105 and 1 × 106 cells mL-1) and exposure periods (4 d and 8 d). Both growth rate and photosynthetic parameters of the microalgae in response of atrazine stress were determined to find out the sensitive indices and toxicological mechanisms. Because of the independence of initial cell density as well as the high sensitivity and reliability, the performance index PIABS was verified as the most convincing photosynthetic parameter for indicating IC50 of atrazine on Chlorella sp., being superior to the traditional parameters of growth rate and FV/FM. The IP amplitude (ΔFIP, fluorescence amplitude of the I-to-P-rise in the OJIP curve) was another sensitive biomarker to reflect atrazine stress. Results from chlorophyll fluorescence transient revealed that atrazine damaged the photosystem II (PS II) reaction center, suppressed the electron transport at the donor and receptor sides, and acted on the absorption, transfer, and utilization of light energy. Our results provide confirmatory references for understanding the toxicity and mechanisms of atrazine on freshwater microalgae.
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Affiliation(s)
- Chen Sun
- College of Biological, Chemical Science and Engineering, Jiaxing University, Jiaxing, 314001, PR China
| | - Yinfeng Xu
- College of Biological, Chemical Science and Engineering, Jiaxing University, Jiaxing, 314001, PR China
| | - Naitao Hu
- School of Chemical and Material Engineering, Jiangnan University, Wuxi, 214122, PR China
| | - Jun Ma
- College of Biological, Chemical Science and Engineering, Jiaxing University, Jiaxing, 314001, PR China
| | - Shiqing Sun
- College of Biological, Chemical Science and Engineering, Jiaxing University, Jiaxing, 314001, PR China
| | - Weixing Cao
- College of Biological, Chemical Science and Engineering, Jiaxing University, Jiaxing, 314001, PR China
| | - Göran Klobučar
- Department of Biology, Faculty of Science, University of Zagreb, Croatia
| | - Changwei Hu
- College of Biological, Chemical Science and Engineering, Jiaxing University, Jiaxing, 314001, PR China.
| | - Yongjun Zhao
- College of Biological, Chemical Science and Engineering, Jiaxing University, Jiaxing, 314001, PR China.
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49
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Walker BJ, Kramer DM, Fisher N, Fu X. Flexibility in the Energy Balancing Network of Photosynthesis Enables Safe Operation under Changing Environmental Conditions. PLANTS (BASEL, SWITZERLAND) 2020; 9:E301. [PMID: 32121540 PMCID: PMC7154899 DOI: 10.3390/plants9030301] [Citation(s) in RCA: 36] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/17/2020] [Revised: 02/13/2020] [Accepted: 02/15/2020] [Indexed: 12/11/2022]
Abstract
Given their ability to harness chemical energy from the sun and generate the organic compounds necessary for life, photosynthetic organisms have the unique capacity to act simultaneously as their own power and manufacturing plant. This dual capacity presents many unique challenges, chiefly that energy supply must be perfectly balanced with energy demand to prevent photodamage and allow for optimal growth. From this perspective, we discuss the energy balancing network using recent studies and a quantitative framework for calculating metabolic ATP and NAD(P)H demand using measured leaf gas exchange and assumptions of metabolic demand. We focus on exploring how the energy balancing network itself is structured to allow safe and flexible energy supply. We discuss when the energy balancing network appears to operate optimally and when it favors high capacity instead. We also present the hypothesis that the energy balancing network itself can adapt over longer time scales to a given metabolic demand and how metabolism itself may participate in this energy balancing.
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Affiliation(s)
- Berkley J. Walker
- Plant Research Laboratory, Michigan State University, East Lansing, MI 48823, USA; (D.M.K.); (N.F.); (X.F.)
- Department of Plant Biology, Michigan State University, East Lansing, MI 48823, USA
| | - David M. Kramer
- Plant Research Laboratory, Michigan State University, East Lansing, MI 48823, USA; (D.M.K.); (N.F.); (X.F.)
- Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, MI 48823, USA
| | - Nicholas Fisher
- Plant Research Laboratory, Michigan State University, East Lansing, MI 48823, USA; (D.M.K.); (N.F.); (X.F.)
| | - Xinyu Fu
- Plant Research Laboratory, Michigan State University, East Lansing, MI 48823, USA; (D.M.K.); (N.F.); (X.F.)
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Bjerkelund Røkke G, Hohmann-Marriott MF, Almaas E. An adjustable algal chloroplast plug-and-play model for genome-scale metabolic models. PLoS One 2020; 15:e0229408. [PMID: 32092117 PMCID: PMC7039451 DOI: 10.1371/journal.pone.0229408] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/25/2019] [Accepted: 02/05/2020] [Indexed: 01/25/2023] Open
Abstract
The chloroplast is a central part of plant cells, as this is the organelle where the photosynthesis, fixation of inorganic carbon, and other key functions related to fatty acid synthesis and amino acid synthesis occur. Since this organelle should be an integral part of any genome-scale metabolic model for a microalgae or a higher plant, it is of great interest to generate a detailed and standardized chloroplast model. Additionally, we see the need for a novel type of sub-model template, or organelle model, which could be incorporated into a larger, less specific genome-scale metabolic model, while allowing for minor differences between chloroplast-containing organisms. The result of this work is the very first standardized chloroplast model, iGR774, consisting of 788 reactions, 764 metabolites, and 774 genes. The model is currently able to run in three different modes, mimicking the chloroplast metabolism of three photosynthetic microalgae-Nannochloropsis gaditana, Chlamydomonas reinhardtii and Phaeodactylum tricornutum. In addition to developing the chloroplast metabolic network reconstruction, we have developed multiple software tools for working with this novel type of sub-model in the COBRA Toolbox for MATLAB, including tools for connecting the chloroplast model to a genome-scale metabolic reconstruction in need of a chloroplast, for switching the model between running in different organism modes, and for expanding it by introducing more reactions either related to one of the current organisms included in the model, or to a new organism.
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Affiliation(s)
- Gunvor Bjerkelund Røkke
- Department of Biotechnology and Food Science, The Norwegian University of Science and Technology, Trondheim, Norway
| | | | - Eivind Almaas
- Department of Biotechnology and Food Science, The Norwegian University of Science and Technology, Trondheim, Norway
- K. G. Jebsen Center for Genetic Epidemiology, The Norwegian University of Science and Technology, Trondheim, Norway
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