1
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Soussi-Therond M, Guarin D, Razanahoera A, Zhang Y, Baudin M, Miclet E, Giraud N, Abergel D. Simultaneous Observation of the Anomerization and Reaction Rates of Enzymatic Dehydrogenation of Glucose-6-Phosphate by Dissolution DNP. J Am Chem Soc 2024; 146:34651-34660. [PMID: 39635873 DOI: 10.1021/jacs.4c12904] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/07/2024]
Abstract
The hyperpolarization of biological samples using dissolution dynamic nuclear polarization (dDNP) has become an attractive method for the monitoring of fast chemical and enzymatic reactions using NMR by taking advantage of a large signal increase. This approach is actively developing but still needs key methodological breakthroughs to be used as an analytical method for the monitoring of complex networks of simultaneous metabolic pathways. In this article, we use the deceptively simple example of glucose-6-phosphate (G6P) oxidation reaction by the enzyme G6P dehydrogenase (G6PDH) to discuss some important methodological aspects of dDNP kinetic experiments, such as its robustness and its ability to provide repeatable results as well as the capacity of this time-resolved methodology to test kinetic models and hypotheses and to provide reliable parameter estimates. To illustrate the potential of our approach, we report the first direct and quantitative evidence of selectivity of G6PDH toward the β anomer of G6P.
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Affiliation(s)
- Mehdi Soussi-Therond
- Laboratoire des biomolécules, LBM, Département de chimie, Ecole normale supérieure, CNRS, PSL University, Sorbonne Université, Paris 75005, France
| | - David Guarin
- Laboratoire des biomolécules, LBM, Département de chimie, Ecole normale supérieure, CNRS, PSL University, Sorbonne Université, Paris 75005, France
| | - Aiky Razanahoera
- Laboratoire des biomolécules, LBM, Département de chimie, Ecole normale supérieure, CNRS, PSL University, Sorbonne Université, Paris 75005, France
| | - Yongmin Zhang
- Institut Parisien de Chimie Moléculaire, CNRS, UMR 8232, Sorbonne Université, 4 Place Jussieu, Paris 75005, France
- Fuyang Institute & School of Pharmaceutical Sciences, Zhejiang Chinese Medical University, Hangzhou, Zhejiang311422, China
| | - Mathieu Baudin
- Laboratoire des biomolécules, LBM, Département de chimie, Ecole normale supérieure, CNRS, PSL University, Sorbonne Université, Paris 75005, France
- Laboratoire de Chimie et Biochimie Pharmacologiques et Toxicologiques, LCBPT UMR 8601, Université Paris Cité, 45, Rue des Saints Pères, Paris 75006 , France
| | - Emeric Miclet
- Laboratoire des biomolécules, LBM, Département de chimie, Ecole normale supérieure, CNRS, PSL University, Sorbonne Université, Paris 75005, France
| | - Nicolas Giraud
- Laboratoire de Chimie et Biochimie Pharmacologiques et Toxicologiques, LCBPT UMR 8601, Université Paris Cité, 45, Rue des Saints Pères, Paris 75006 , France
| | - Daniel Abergel
- Laboratoire des biomolécules, LBM, Département de chimie, Ecole normale supérieure, CNRS, PSL University, Sorbonne Université, Paris 75005, France
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2
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Bocquelet C, Rougier N, Le HN, Veyre L, Thieuleux C, Melzi R, Purea A, Banks D, Kempf JG, Stern Q, Vaneeckhaute E, Jannin S. Boosting 1H and 13C NMR signals by orders of magnitude on a bench. SCIENCE ADVANCES 2024; 10:eadq3780. [PMID: 39630888 PMCID: PMC11616688 DOI: 10.1126/sciadv.adq3780] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/13/2024] [Accepted: 10/29/2024] [Indexed: 12/07/2024]
Abstract
Sensitivity is often the Achilles' heel of liquid-state nuclear magnetic resonance (NMR) experiments. This problem is perhaps most pressing at the lowest fields (e.g., 80-MHz 1H frequency), with rapidly increasing access to NMR through benchtop systems, but also sometimes for higher-field NMR systems from 300 MHz to 1.2 GHz. Hyperpolarization by dissolution dynamic nuclear polarization (dDNP) can address this sensitivity limitation. However, dDNP implies massive and complex cryogenic and high-field instrumentation, which cannot be installed on the bench. We introduce here a compact helium-free 1-T tabletop polarizer as a simple and low-cost alternative. After freezing and polarizing the frozen analyte solutions at 77 K, we demonstrate 1H signal enhancement factors of 100, with rapid 1-s buildup times. The high polarization is subsequently transferred by 1H→13C cross polarization (CP) to 13C spins. Such a simple benchtop polarizer, in combination with hyperpolarizing solid matrices (HYPSOs), may open the way to replenishable hyperpolarization throughout multiple liquid-state NMR experiments.
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Affiliation(s)
- Charlotte Bocquelet
- Universite Claude Bernard Lyon 1, CNRS, ENS Lyon, CRMN UMR 5082, 69100 Villeurbanne, France
| | - Nathan Rougier
- Universite Claude Bernard Lyon 1, CNRS, ENS Lyon, CRMN UMR 5082, 69100 Villeurbanne, France
| | - Huu-Nghia Le
- Universite Claude Bernard Lyon 1, Institut de Chimie de Lyon, CP2M UMR 5128 CNRS-UCBL-CPE Lyon, 69616 Villeurbanne, France
| | - Laurent Veyre
- Universite Claude Bernard Lyon 1, Institut de Chimie de Lyon, CP2M UMR 5128 CNRS-UCBL-CPE Lyon, 69616 Villeurbanne, France
| | - Chloe Thieuleux
- Universite Claude Bernard Lyon 1, Institut de Chimie de Lyon, CP2M UMR 5128 CNRS-UCBL-CPE Lyon, 69616 Villeurbanne, France
| | - Roberto Melzi
- Bruker Italia S.r.l., Viale V. Lancetti 43, 20158 Milano, Italy
| | | | | | | | - Quentin Stern
- Universite Claude Bernard Lyon 1, CNRS, ENS Lyon, CRMN UMR 5082, 69100 Villeurbanne, France
| | - Ewoud Vaneeckhaute
- Universite Claude Bernard Lyon 1, CNRS, ENS Lyon, CRMN UMR 5082, 69100 Villeurbanne, France
| | - Sami Jannin
- Universite Claude Bernard Lyon 1, CNRS, ENS Lyon, CRMN UMR 5082, 69100 Villeurbanne, France
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3
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Stern Q, Verhaeghe G, El Daraï T, Montarnal D, Huu Le N, Veyre L, Thieuleux C, Bocquelet C, Cala O, Jannin S. Dynamic Nuclear Polarization with Conductive Polymers. Angew Chem Int Ed Engl 2024; 63:e202409510. [PMID: 39264818 DOI: 10.1002/anie.202409510] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/20/2024] [Revised: 09/11/2024] [Accepted: 09/11/2024] [Indexed: 09/14/2024]
Abstract
The low sensitivity of liquid-state nuclear magnetic resonance (NMR) can be overcome by hyperpolarizing nuclear spins by dissolution dynamic nuclear polarization (dDNP). It consists of transferring the near-unity polarization of unpaired electron spins of stable radicals to the nuclear spins of interest at liquid helium temperatures, below 2 K, before melting the sample in view of hyperpolarized liquid-state magnetic resonance experiments. Reaching such a temperature is challenging and requires complex instrumentation, which impedes the deployment of dDNP. Here, we propose organic conductive polymers such as polyaniline (PANI) as a new class of polarizing matrices and report 1H polarizations of up to 5 %. We also show that 13C spins of a host solution impregnated in porous conductive polymers can be hyperpolarized by relayed DNP. Such conductive polymers can be synthesized as chiral and display current induced spin selectivity leading to electron spin hyperpolarization close to unity without the need for low temperatures nor high magnetic fields. Our results show the feasibility of solid-state DNP in conductive polymers that are known to exhibit chirality-induced spin selectivity.
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Affiliation(s)
- Quentin Stern
- Université Claude Bernard Lyon 1, CRMN UMR-5082, CNRS, ENS Lyon, Villeurbanne, 69100, France
| | - Guillaume Verhaeghe
- Université Claude Bernard Lyon 1, CRMN UMR-5082, CNRS, ENS Lyon, Villeurbanne, 69100, France
| | - Théo El Daraï
- Université Claude Bernard Lyon 1, CRMN UMR-5082, CNRS, ENS Lyon, Villeurbanne, 69100, France
- Université de Lyon, Institut de Chimie de Lyon, Laboratory of Catalysis, Polymerization, Processes and Materials, CP2M UMR 5128 CNRS-UCB Lyon 1 CPE Lyon 43 Bd du 11 Novembre 1918, 69616, Villeurbanne, France
| | - Damien Montarnal
- Université de Lyon, Institut de Chimie de Lyon, Laboratory of Catalysis, Polymerization, Processes and Materials, CP2M UMR 5128 CNRS-UCB Lyon 1 CPE Lyon 43 Bd du 11 Novembre 1918, 69616, Villeurbanne, France
| | - Nghia Huu Le
- Université de Lyon, Institut de Chimie de Lyon, Laboratory of Catalysis, Polymerization, Processes and Materials, CP2M UMR 5128 CNRS-UCB Lyon 1 CPE Lyon 43 Bd du 11 Novembre 1918, 69616, Villeurbanne, France
| | - Laurent Veyre
- Université de Lyon, Institut de Chimie de Lyon, Laboratory of Catalysis, Polymerization, Processes and Materials, CP2M UMR 5128 CNRS-UCB Lyon 1 CPE Lyon 43 Bd du 11 Novembre 1918, 69616, Villeurbanne, France
| | - Chloé Thieuleux
- Université de Lyon, Institut de Chimie de Lyon, Laboratory of Catalysis, Polymerization, Processes and Materials, CP2M UMR 5128 CNRS-UCB Lyon 1 CPE Lyon 43 Bd du 11 Novembre 1918, 69616, Villeurbanne, France
| | - Charlotte Bocquelet
- Université Claude Bernard Lyon 1, CRMN UMR-5082, CNRS, ENS Lyon, Villeurbanne, 69100, France
| | - Olivier Cala
- Université Claude Bernard Lyon 1, CRMN UMR-5082, CNRS, ENS Lyon, Villeurbanne, 69100, France
| | - Sami Jannin
- Université Claude Bernard Lyon 1, CRMN UMR-5082, CNRS, ENS Lyon, Villeurbanne, 69100, France
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4
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Dos Santos K, Bertho G, Baudin M, Giraud N. Glutamine: A key player in human metabolism as revealed by hyperpolarized magnetic resonance. PROGRESS IN NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY 2024; 144-145:15-39. [PMID: 39645348 DOI: 10.1016/j.pnmrs.2024.05.003] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/01/2024] [Revised: 05/17/2024] [Accepted: 05/28/2024] [Indexed: 12/09/2024]
Abstract
In recent years, there has been remarkable progress in the field of dissolution dynamic nuclear polarization (D-DNP). This method has shown significant potential for enhancing nuclear polarization by over 10,000 times, resulting in a substantial increase in sensitivity. The unprecedented signal enhancements achieved with D-DNP have opened new possibilities for in vitro analysis. This method enables the monitoring of structural and enzymatic kinetics with excellent time resolution at low concentrations. Furthermore, these advances can be straightforwardly translated to in vivo magnetic resonance imaging and magnetic resonance spectroscopy (MRI and MRS) experiments. D-DNP studies have used a range of 13C labeled molecules to gain deeper insights into the cellular metabolic pathways and disease hallmarks. Over the last 15 years, D-DNP has been used to analyze glutamine, a key player in the cellular metabolism, involved in many diseases including cancer. Glutamine is the most abundant amino acid in blood plasma and the major carrier of nitrogen, and it is converted to glutamate inside the cell, where the latter is the most abundant amino acid. It has been shown that increased glutamine consumption by cells is a hallmark of tumor cancer metabolism. In this review, we first highlight the significance of glutamine in metabolism, providing an in-depth description of its use at the cellular level as well as its specific roles in various organs. Next, we present a comprehensive overview of the principles of D-DNP. Finally, we review the state of the art in D-DNP glutamine analysis and its application in oncology, neurology, and perfusion marker studies.
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Affiliation(s)
- Karen Dos Santos
- Laboratoire de Chimie et Biochimie Pharmacologiques et Toxicologiques Université Paris Cité, 45 rue des Saints Pères, 75006 Paris, France
| | - Gildas Bertho
- Laboratoire de Chimie et Biochimie Pharmacologiques et Toxicologiques Université Paris Cité, 45 rue des Saints Pères, 75006 Paris, France
| | - Mathieu Baudin
- Laboratoire de Chimie et Biochimie Pharmacologiques et Toxicologiques Université Paris Cité, 45 rue des Saints Pères, 75006 Paris, France; Laboratoire des Biomolécules, LBM, Département de chimie, École Normale Supérieure, PSL Université, Sorbonne Université 45 rue d'Ulm, 75005 Paris, France
| | - Nicolas Giraud
- Laboratoire de Chimie et Biochimie Pharmacologiques et Toxicologiques Université Paris Cité, 45 rue des Saints Pères, 75006 Paris, France.
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5
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Silva Terra AI, Taylor DA, Halse ME. Hyperpolarised benchtop NMR spectroscopy for analytical applications. PROGRESS IN NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY 2024; 144-145:153-178. [PMID: 39645349 DOI: 10.1016/j.pnmrs.2024.10.001] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/08/2024] [Revised: 10/01/2024] [Accepted: 10/01/2024] [Indexed: 12/09/2024]
Abstract
Benchtop NMR spectrometers, with moderate magnetic field strengths (B0=1-2.4T) and sub-ppm chemical shift resolution, are an affordable and portable alternative to standard laboratory NMR (B0≥7T). However, in moving to lower magnetic field instruments, sensitivity and chemical shift resolution are significantly reduced. The sensitivity limitation can be overcome by using hyperpolarisation to boost benchtop NMR signals by orders of magnitude. Of the wide range of hyperpolarisation methods currently available, dynamic nuclear polarisation (DNP), parahydrogen-induced polarisation (PHIP) and photochemically-induced dynamic nuclear polarisation (photo-CIDNP) have, to date, shown the most promise for integration with benchtop NMR for analytical applications. In this review we provide a summary of the theory of each of these techniques and discuss examples of how they have been integrated with benchtop NMR detection. Progress towards the use of hyperpolarised benchtop NMR for analytical applications, ranging from reaction monitoring to probing biomolecular interactions, is discussed, along with perspectives for the future.
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Affiliation(s)
| | - Daniel A Taylor
- Department of Chemistry, University of York, York, YO10 5DD, UK
| | - Meghan E Halse
- Department of Chemistry, University of York, York, YO10 5DD, UK.
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6
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Meier S, Zahid ALN, Jørgensen LR, Wang KC, Jensen PR, Jensen PR. Hyperpolarized 13C NMR Reveals Pathway Regulation in Lactococcus lactis and Metabolic Similarities and Differences Across the Tree of Life. Molecules 2024; 29:4133. [PMID: 39274981 PMCID: PMC11397382 DOI: 10.3390/molecules29174133] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/09/2024] [Revised: 08/20/2024] [Accepted: 08/26/2024] [Indexed: 09/16/2024] Open
Abstract
The control of metabolic networks is incompletely understood, even for glycolysis in highly studied model organisms. Direct real-time observations of metabolic pathways can be achieved in cellular systems with 13C NMR using dissolution Dynamic Nuclear Polarization (dDNP NMR). The method relies on a short-lived boost of NMR sensitivity using a redistribution of nuclear spin states to increase the alignment of the magnetic moments by more than four orders of magnitude. This temporary boost in sensitivity allows detection of metabolism with sub-second time resolution. Here, we hypothesized that dDNP NMR would be able to investigate molecular phenotypes that are not easily accessible with more conventional methods. The use of dDNP NMR allows real-time insight into carbohydrate metabolism in a Gram-positive bacterium (Lactoccocus lactis), and comparison to other bacterial, yeast and mammalian cells shows differences in the kinetic barriers of glycolysis across the kingdoms of life. Nevertheless, the accumulation of non-toxic precursors for biomass at kinetic barriers is found to be shared across the kingdoms of life. We further find that the visualization of glycolysis using dDNP NMR reveals kinetic characteristics in transgenic strains that are not evident when monitoring the overall glycolytic rate only. Finally, dDNP NMR reveals that resting Lactococcus lactis cells use the influx of carbohydrate substrate to produce acetoin rather than lactate during the start of glycolysis. This metabolic regime can be emulated using suitably designed substrate mixtures to enhance the formation of the C4 product acetoin more than 400-fold. Overall, we find that dDNP NMR provides analytical capabilities that may help to clarify the intertwined mechanistic determinants of metabolism and the optimal usage of biotechnologically important bacteria.
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Affiliation(s)
- Sebastian Meier
- Department of Chemistry, Technical University of Denmark, 2800 Kongens Lyngby, Denmark
| | - Alexandra L N Zahid
- Department of Health Technology, Technical University of Denmark, 2800 Kongens Lyngby, Denmark
| | - Lucas Rebien Jørgensen
- Department of Health Technology, Technical University of Denmark, 2800 Kongens Lyngby, Denmark
| | - Ke-Chuan Wang
- Department of Health Technology, Technical University of Denmark, 2800 Kongens Lyngby, Denmark
| | - Peter Ruhdal Jensen
- Department of National Food Institute, Technical University of Denmark, 2800 Kongens Lyngby, Denmark
| | - Pernille Rose Jensen
- Department of Health Technology, Technical University of Denmark, 2800 Kongens Lyngby, Denmark
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7
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Fukazawa J, Mochizuki Y, Kanai S, Miura N, Negoro M, Kagawa A. Real-Time Monitoring of Hydrolysis Reactions of Pyrophosphates with Dissolution Dynamic Nuclear Polarization. J Phys Chem Lett 2024; 15:7288-7294. [PMID: 38980118 DOI: 10.1021/acs.jpclett.4c01456] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/10/2024]
Abstract
Dissolution dynamic nuclear polarization (d-DNP) has enabled applications such as the real-time monitoring of chemical reactions. Such applications are mainly for 13C and 15N spins with long spin-lattice relaxation times in the molecules of interest. However, the only applications for phosphorus using d-DNP are pH imaging and nucleation during crystallization due to the short relaxation times. Here we show that it is possible to observe enzyme reactions using d-DNP with phosphorus. Hyperpolarized 31P spins in pyrophosphate were obtained using bullet-DNP, which requires less dilution of highly polarized solid samples. Real-time monitoring of the hydrolysis reaction of pyrophosphate by inorganic pyrophosphatase from baker's yeast at physiological pH and was successfully achieved and the reaction rate was determined. This is an important reaction for a wide range of applications related to medicine, agriculture, and quantum life science.
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Affiliation(s)
- Jun Fukazawa
- Center for Quantum Information and Quantum Biology, Osaka University, Toyonaka, Osaka 560-0043, Japan
| | - Yuuki Mochizuki
- Graduate School of Engineering Science, Osaka University, Toyonaka, Osaka 560-8531, Japan
| | - Sakyo Kanai
- Graduate School of Engineering Science, Osaka University, Toyonaka, Osaka 560-8531, Japan
| | - Natsuko Miura
- Department of Applied Biological Chemistry, Graduate School of Agriculture, Osaka Metropolitan University, Sakai, Osaka 599-8231, Japan
| | - Makoto Negoro
- Center for Quantum Information and Quantum Biology, Osaka University, Toyonaka, Osaka 560-0043, Japan
- Institute for Quantum Life Science (iQLS), National Institutes for Quantum and Radiological Science and Technology (QST), Chiba 263-8555, Japan
- Premium Research Institute for Human Metaverse Medicine, Osaka University, Suita, Osaka 565-0871, Japan
| | - Akinori Kagawa
- Center for Quantum Information and Quantum Biology, Osaka University, Toyonaka, Osaka 560-0043, Japan
- Premium Research Institute for Human Metaverse Medicine, Osaka University, Suita, Osaka 565-0871, Japan
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8
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Camenisch GM, Wili N, Jeschke G, Ernst M. Pulsed dynamic nuclear polarization: a comprehensive Floquet description. Phys Chem Chem Phys 2024; 26:17666-17683. [PMID: 38868989 PMCID: PMC11202326 DOI: 10.1039/d4cp01788a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2024] [Accepted: 06/05/2024] [Indexed: 06/14/2024]
Abstract
Dynamic nuclear polarization (DNP) experiments using microwave (mw) pulse sequences are one approach to transfer the larger polarization on the electron spin to nuclear spins of interest. How the result of such experiments depends on the external magnetic field and the excitation power is part of an ongoing debate and of paramount importance for applications that require high chemical-shift resolution. To date numerical simulations using operator-based Floquet theory have been used to predict and explain experimental data. However, such numerical simulations provide only limited insight into parameters relevant for efficient polarization transfer, such as transition amplitudes or resonance offsets. Here we present an alternative method to describe pulsed DNP experiments by using matrix-based Floquet theory. This approach leads to analytical expressions for the transition amplitudes and resonance offsets. We validate the method by comparing computations by these analytical expressions to their numerical counterparts and to experimental results for the XiX, TOP and TPPM DNP sequences. Our results explain the experimental data and are in very good agreement with the numerical simulations. The analytical expressions allow for the discussion of the scaling behaviour of pulsed DNP experiments with respect to the external magnetic field. We find that the transition amplitudes scale inversely with the external magnetic field.
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Affiliation(s)
- Gian-Marco Camenisch
- Department of Chemistry and Applied Biosciences, ETH Zürich, Zürich, Switzerland.
| | - Nino Wili
- Interdisciplinary Nanoscience Center (iNANO) and Department of Chemistry, Aarhus University, Aarhus, Denmark
| | - Gunnar Jeschke
- Department of Chemistry and Applied Biosciences, ETH Zürich, Zürich, Switzerland.
| | - Matthias Ernst
- Department of Chemistry and Applied Biosciences, ETH Zürich, Zürich, Switzerland.
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9
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Singh K, Frydman L. Single-Scan Heteronuclear 13C- 15N J-Coupling NMR Observations Enhanced by Dissolution Dynamic Nuclear Polarization. J Phys Chem Lett 2024; 15:5659-5664. [PMID: 38767577 PMCID: PMC11145644 DOI: 10.1021/acs.jpclett.4c01190] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/23/2024] [Revised: 05/10/2024] [Accepted: 05/14/2024] [Indexed: 05/22/2024]
Abstract
Heteronuclear 13C-15N couplings were measured in single-scan nuclear magnetic resonance (NMR) experiments for a variety of nitrogen-containing chemical compounds with varied structural characteristics, by using a one-dimensional (1D) 13C-15N multiple-quantum (MQ)-filtered experiment. Sensitivity limitations of the MQ filtering were overcome by the combined use of 15N labeling and dissolution dynamic nuclear polarization (dDNP), performed at cryogenic conditions and followed by quick and optimized sample melting and transfer procedures. Coupling information could thus be obtained from nucleotide bases, amino acids, urea, and aliphatic and aromatic amides, including the measurement of relatively small J-couplings directly from the 1D filtered spectra. This experiment could pave the way for NMR-based analytical applications that investigate structural and stereochemical insights into nitrogen-containing compounds, including dipeptides and proteins, while relying on heteronuclear couplings and nuclear hyperpolarization.
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Affiliation(s)
- Kawarpal Singh
- Department
of Chemical and Biological Physics, Weizmann
Institute of Science, 7610001 Rehovot, Israel
- Yusuf
Hamied Department of Chemistry, University
of Cambridge, Lensfield Road, CB2 1EW Cambridge, United Kingdom
| | - Lucio Frydman
- Department
of Chemical and Biological Physics, Weizmann
Institute of Science, 7610001 Rehovot, Israel
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10
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Inukai M, Sato H, Miyanishi K, Negoro M, Kagawa A, Hori Y, Shigeta Y, Kurihara T, Nakamura K. Cocrystalline Matrices for Hyperpolarization at Room Temperature Using Photoexcited Electrons. J Am Chem Soc 2024; 146:14539-14545. [PMID: 38754971 DOI: 10.1021/jacs.4c01050] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/18/2024]
Abstract
We propose using cocrystals as effective polarization matrices for triplet dynamic nuclear polarization (DNP) at room temperature. The polarization source can be uniformly doped into cocrystals formed through acid-acid, amide-amide, and acid-amide synthons. The dense-packing crystal structures, facilitated by multiple hydrogen bonding and π-π interactions, result in extended T1 relaxation times, enabling efficient polarization diffusion within the crystals. Our study demonstrates the successful polarization of a DNP-magnetic resonance imaging molecular probe, such as urea, within a cocrystal matrix at room temperature using triplet-DNP.
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Affiliation(s)
- Munehiro Inukai
- Graduate School of Technology, Industrial and Social Sciences, Tokushima University, Tokushima 770-8506, Japan
| | - Haruki Sato
- Graduate School of Science and Technology for Innovation, Tokushima University, Tokushima 770-8506, Japan
| | - Koichiro Miyanishi
- Graduate School of Engineering Science, Osaka University, Toyonaka, Osaka 560-8531, Japan
- Center for Quantum Information and Quantum Biology, Osaka University, Toyonaka, Osaka 560-8531, Japan
| | - Makoto Negoro
- Center for Quantum Information and Quantum Biology, Osaka University, Toyonaka, Osaka 560-8531, Japan
- Institute for Quantum Life Science, National Institutes for Quantum and Radiological Science and Technology, Inage-Ku, Chiba 263-8555, Japan
- Premium Research Institute for Human Metaverse Medicine, Osaka University, Toyonaka, Osaka 560-0043, Japan
| | - Akinori Kagawa
- Center for Quantum Information and Quantum Biology, Osaka University, Toyonaka, Osaka 560-8531, Japan
- Premium Research Institute for Human Metaverse Medicine, Osaka University, Toyonaka, Osaka 560-0043, Japan
| | - Yuta Hori
- Center for Computational Sciences, University of Tsukuba, Tsukuba 305-8577, Japan
| | - Yasuteru Shigeta
- Center for Computational Sciences, University of Tsukuba, Tsukuba 305-8577, Japan
| | - Takuya Kurihara
- Division of Material Chemistry, Graduate School of Natural Science and Technology, Kanazawa University, Kanazawa, Ishikawa 920-1192, Japan
| | - Koichi Nakamura
- Graduate School of Technology, Industrial and Social Sciences, Tokushima University, Tokushima 770-8506, Japan
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11
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Salnikov OG, Trofimov IA, Bender ZT, Trepakova AI, Xu J, Wibbels GL, Shchepin RV, Koptyug IV, Barskiy DA. Parahydrogen-Induced Polarization of 14N Nuclei. Angew Chem Int Ed Engl 2024; 63:e202402877. [PMID: 38523072 DOI: 10.1002/anie.202402877] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/08/2024] [Revised: 03/22/2024] [Accepted: 03/22/2024] [Indexed: 03/26/2024]
Abstract
Hyperpolarization techniques provide a dramatic increase in sensitivity of nuclear magnetic resonance spectroscopy and imaging. In spite of the outstanding progress in solution-state hyperpolarization of spin-1/2 nuclei, hyperpolarization of quadrupolar nuclei remains challenging. Here, hyperpolarization of quadrupolar 14N nuclei with natural isotopic abundance of >99 % is demonstrated. This is achieved via pairwise addition of parahydrogen to tetraalkylammonium salts with vinyl or allyl unsaturated moieties followed by a subsequent polarization transfer from 1H to 14N nuclei at high magnetic field using PH-INEPT or PH-INEPT+ radiofrequency pulse sequence. Catalyst screening identified water-soluble rhodium complex [Rh(P(m-C6H4SO3Na)3)3Cl] as the most efficient catalyst for hyperpolarization of the substrates under study, providing up to 1.3 % and up to 6.6 % 1H polarization in the cases of vinyl and allyl precursors, respectively. The performance of PH-INEPT and PH-INEPT+ pulse sequences was optimized with respect to interpulse delays, and the resultant experimental dependences were in good agreement with simulations. As a result, 14N NMR signal enhancement of up to 760-fold at 7.05 T (corresponding to 0.15 % 14N polarization) was obtained.
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Affiliation(s)
- Oleg G Salnikov
- International Tomography Center SB RAS, 3 A Institutskaya St., Novosibirsk, 630090, Russia
| | - Ivan A Trofimov
- International Tomography Center SB RAS, 3 A Institutskaya St., Novosibirsk, 630090, Russia
- Current affiliation, Division of Medical Physics, Department of Diagnostic and Interventional Radiology, Faculty of Medicine, University of Freiburg, University Medical Center Freiburg, Freiburg, 79106, Germany
| | - Zachary T Bender
- South Dakota School of Mines & Technology, Rapid City, South Dakota, 57701, United States
| | - Alexandra I Trepakova
- International Tomography Center SB RAS, 3 A Institutskaya St., Novosibirsk, 630090, Russia
| | - Jingyan Xu
- Helmholtz Institute Mainz, GSI Helmholtz Center for Heavy Ion Research GmbH, and, Institute of Physics, Johannes Gutenberg-Universität, Mainz, 55128, Germany
| | - Garrett L Wibbels
- South Dakota School of Mines & Technology, Rapid City, South Dakota, 57701, United States
| | - Roman V Shchepin
- South Dakota School of Mines & Technology, Rapid City, South Dakota, 57701, United States
| | - Igor V Koptyug
- International Tomography Center SB RAS, 3 A Institutskaya St., Novosibirsk, 630090, Russia
| | - Danila A Barskiy
- Helmholtz Institute Mainz, GSI Helmholtz Center for Heavy Ion Research GmbH, and, Institute of Physics, Johannes Gutenberg-Universität, Mainz, 55128, Germany
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12
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Zhan H, Chen Y, Cui Y, Zeng Y, Feng X, Tan C, Huang C, Lin E, Huang Y, Chen Z. Pure-Shift-Based Proton Magnetic Resonance Spectroscopy for High-Resolution Studies of Biological Samples. Int J Mol Sci 2024; 25:4698. [PMID: 38731917 PMCID: PMC11083948 DOI: 10.3390/ijms25094698] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2024] [Revised: 04/18/2024] [Accepted: 04/23/2024] [Indexed: 05/13/2024] Open
Abstract
Proton magnetic resonance spectroscopy (1H MRS) presents a powerful tool for revealing molecular-level metabolite information, complementary to the anatomical insight delivered by magnetic resonance imaging (MRI), thus playing a significant role in in vivo/in vitro biological studies. However, its further applications are generally confined by spectral congestion caused by numerous biological metabolites contained within the limited proton frequency range. Herein, we propose a pure-shift-based 1H localized MRS method as a proof of concept for high-resolution studies of biological samples. Benefitting from the spectral simplification from multiplets to singlet peaks, this method addresses the challenge of spectral congestion encountered in conventional MRS experiments and facilitates metabolite analysis from crowded NMR resonances. The performance of the proposed pure-shift 1H MRS method is demonstrated on different kinds of samples, including brain metabolite phantom and in vitro biological samples of intact pig brain tissue and grape tissue, using a 7.0 T animal MRI scanner. This proposed MRS method is readily implemented in common commercial NMR/MRI instruments because of its generally adopted pulse-sequence modules. Therefore, this study takes a meaningful step for MRS studies toward potential applications in metabolite analysis and disease diagnosis.
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Affiliation(s)
- Haolin Zhan
- Department of Electronic Science, Fujian Provincial Key Laboratory of Plasma and Magnetic Resonance, State Key Laboratory of Physical Chemistry of Solid Surfaces, Xiamen University, Xiamen 361005, China
- Department of Biomedical Engineering, Anhui Provincial Engineering Research Center of Semiconductor Inspection Technology and Instrument, Anhui Province Key Laboratory of Measuring Theory and Precision Instrument, Hefei University of Technology, Hefei 230009, China
| | - Yulei Chen
- Department of Electronic Science, Fujian Provincial Key Laboratory of Plasma and Magnetic Resonance, State Key Laboratory of Physical Chemistry of Solid Surfaces, Xiamen University, Xiamen 361005, China
| | - Yinping Cui
- Department of Electronic Science, Fujian Provincial Key Laboratory of Plasma and Magnetic Resonance, State Key Laboratory of Physical Chemistry of Solid Surfaces, Xiamen University, Xiamen 361005, China
| | - Yunsong Zeng
- Department of Electronic Science, Fujian Provincial Key Laboratory of Plasma and Magnetic Resonance, State Key Laboratory of Physical Chemistry of Solid Surfaces, Xiamen University, Xiamen 361005, China
| | - Xiaozhen Feng
- Department of Electronic Science, Fujian Provincial Key Laboratory of Plasma and Magnetic Resonance, State Key Laboratory of Physical Chemistry of Solid Surfaces, Xiamen University, Xiamen 361005, China
| | - Chunhua Tan
- Department of Electronic Science, Fujian Provincial Key Laboratory of Plasma and Magnetic Resonance, State Key Laboratory of Physical Chemistry of Solid Surfaces, Xiamen University, Xiamen 361005, China
| | - Chengda Huang
- Department of Electronic Science, Fujian Provincial Key Laboratory of Plasma and Magnetic Resonance, State Key Laboratory of Physical Chemistry of Solid Surfaces, Xiamen University, Xiamen 361005, China
| | - Enping Lin
- Department of Electronic Science, Fujian Provincial Key Laboratory of Plasma and Magnetic Resonance, State Key Laboratory of Physical Chemistry of Solid Surfaces, Xiamen University, Xiamen 361005, China
| | - Yuqing Huang
- Department of Electronic Science, Fujian Provincial Key Laboratory of Plasma and Magnetic Resonance, State Key Laboratory of Physical Chemistry of Solid Surfaces, Xiamen University, Xiamen 361005, China
| | - Zhong Chen
- Department of Electronic Science, Fujian Provincial Key Laboratory of Plasma and Magnetic Resonance, State Key Laboratory of Physical Chemistry of Solid Surfaces, Xiamen University, Xiamen 361005, China
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13
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Římal V, Bunyatova EI, Štěpánková H. Efficient Scavenging of TEMPOL Radical by Ascorbic Acid in Solution and Related Prolongation of 13C and 1H Nuclear Spin Relaxation Times of the Solute. Molecules 2024; 29:738. [PMID: 38338481 PMCID: PMC10856727 DOI: 10.3390/molecules29030738] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2023] [Revised: 01/28/2024] [Accepted: 01/28/2024] [Indexed: 02/12/2024] Open
Abstract
Dynamic nuclear polarization for nuclear magnetic resonance (NMR) spectroscopy and imaging uses free radicals to strongly enhance the NMR signal of a compound under investigation. At the same time, the radicals shorten significantly its nuclear spin relaxation times which reduces the time window available for the experiments. Radical scavenging can overcome this drawback. Our work presents a detailed study of the reduction of the TEMPOL radical by ascorbic acid in solution by high-resolution NMR. Carbon-13 and hydrogen-1 nuclear spin relaxations are confirmed to be restored to their values without TEMPOL. Reaction mechanism, kinetics, and the influence of pD and viscosity are thoroughly discussed. The detailed investigation conducted in this work should help with choosing suitable concentrations in the samples for dynamic nuclear polarization and optimizing the measurement protocols.
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Affiliation(s)
- Václav Římal
- Faculty of Mathematics and Physics, Charles University, V Holešovičkách 2, 18000 Prague 8, Czech Republic;
| | | | - Helena Štěpánková
- Faculty of Mathematics and Physics, Charles University, V Holešovičkách 2, 18000 Prague 8, Czech Republic;
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14
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Kuhn LT, Weber S, Bargon J, Parella T, Pérez-Trujillo M. Hyperpolarization-Enhanced NMR Spectroscopy of Unaltered Biofluids Using Photo-CIDNP. Anal Chem 2024; 96:102-109. [PMID: 38109875 PMCID: PMC10782414 DOI: 10.1021/acs.analchem.3c03215] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/21/2023] [Revised: 11/28/2023] [Accepted: 11/29/2023] [Indexed: 12/20/2023]
Abstract
The direct and unambiguous detection and identification of individual metabolite molecules present in complex biological mixtures constitute a major challenge in (bio)analytical research. In this context, nuclear magnetic resonance (NMR) spectroscopy has proven to be particularly powerful owing to its ability to provide both qualitative and quantitative atomic-level information on multiple analytes simultaneously in a noninvasive manner. Nevertheless, NMR suffers from a low inherent sensitivity and, moreover, lacks selectivity regarding the number of individual analytes to be studied in a mixture of a myriad of structurally and chemically very different molecules, e.g., metabolites in a biofluid. Here, we describe a method that circumvents these shortcomings via performing selective, photochemically induced dynamic nuclear polarization (photo-CIDNP) enhanced NMR spectroscopy on unmodified complex biological mixtures, i.e., human urine and serum, which yields a single, background-free one-dimensional NMR spectrum. In doing this, we demonstrate that photo-CIDNP experiments on unmodified complex mixtures of biological origin are feasible, can be performed straightforwardly in the native aqueous medium at physiological metabolite concentrations, and act as a spectral filter, facilitating the analysis of NMR spectra of complex biofluids. Due to its noninvasive nature, the method is fully compatible with state-of-the-art metabolomic protocols providing direct spectroscopic information on a small, carefully selected subset of clinically relevant metabolites. We anticipate that this approach, which, in addition, can be combined with existing high-throughput/high-sensitivity NMR methodology, holds great promise for further in-depth studies and development for use in metabolomics and many other areas of analytical research.
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Affiliation(s)
- Lars T. Kuhn
- Institut
für Physikalische Chemie, Albert-Ludwigs-Universität
Freiburg, Albertstr. 21, 79104 Freiburg i. Br., Germany
| | - Stefan Weber
- Institut
für Physikalische Chemie, Albert-Ludwigs-Universität
Freiburg, Albertstr. 21, 79104 Freiburg i. Br., Germany
| | - Joachim Bargon
- Institut
für Physikalische und Theoretische Chemie, Rheinische Friedrich-Wilhelms-Universität Bonn, Wegelerstr. 12, 53115 Bonn, Germany
| | - Teodor Parella
- Servei
de Ressonància Magnètica Nuclear, Facultat de Ciències
i Biosciències, Universitat Autònoma
de Barcelona, 08193 Cerdanyola del Vallès, Catalonia, Spain
| | - Míriam Pérez-Trujillo
- Servei
de Ressonància Magnètica Nuclear, Facultat de Ciències
i Biosciències, Universitat Autònoma
de Barcelona, 08193 Cerdanyola del Vallès, Catalonia, Spain
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15
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Stern Q, Reynard-Feytis Q, Elliott SJ, Ceillier M, Cala O, Ivanov K, Jannin S. Rapid and Simple 13C-Hyperpolarization by 1H Dissolution Dynamic Nuclear Polarization Followed by an Inline Magnetic Field Inversion. J Am Chem Soc 2023; 145:27576-27586. [PMID: 38054954 DOI: 10.1021/jacs.3c09209] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/07/2023]
Abstract
Dissolution dynamic nuclear polarization (dDNP) is a method of choice for preparing hyperpolarized 13C metabolites such as 1-13C-pyruvate used for in vivo applications, including the real-time monitoring of cancer cell metabolism in human patients. The approach consists of transferring the high polarization of electron spins to nuclear spins via microwave irradiation at low temperatures (1.0-1.5 K) and moderate magnetic fields (3.3-7 T). The solid sample is then dissolved and transferred to an NMR spectrometer or MRI scanner for detection in the liquid state. Common dDNP protocols use direct hyperpolarization of 13C spins reaching polarizations of >50% in ∼1-2 h. Alternatively, 1H spins are polarized before transferring their polarization to 13C spins using cross-polarization, reaching polarization levels similar to those of direct DNP in only ∼20 min. However, it relies on more complex instrumentation, requiring highly skilled personnel. Here, we explore an alternative route using 1H dDNP followed by inline adiabatic magnetic field inversion in the liquid state during the transfer. 1H polarizations of >70% in the solid state are obtained in ∼5-10 min. As the hyperpolarized sample travels from the dDNP polarizer to the NMR spectrometer, it goes through a field inversion chamber, which causes the 1H → 13C polarization transfer. This transfer is made possible by the J-coupling between the heteronuclei, which mixes the Zeeman states at zero-field and causes an antilevel crossing. We report liquid-state 13C polarization up to ∼17% for 3-13C-pyruvate and 13C-formate. The instrumentation needed to perform this experiment in addition to a conventional dDNP polarizer is simple and readily assembled.
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Affiliation(s)
- Quentin Stern
- Université Claude Bernard Lyon 1, CRMN UMR-5082, CNRS, ENS Lyon, Villeurbanne 69100 France
| | - Quentin Reynard-Feytis
- Université Claude Bernard Lyon 1, CRMN UMR-5082, CNRS, ENS Lyon, Villeurbanne 69100 France
| | - Stuart J Elliott
- Université Claude Bernard Lyon 1, CRMN UMR-5082, CNRS, ENS Lyon, Villeurbanne 69100 France
- Molecular Sciences Research Hub, Imperial College London, London W12 0BZ, United Kingdom
| | - Morgan Ceillier
- Université Claude Bernard Lyon 1, CRMN UMR-5082, CNRS, ENS Lyon, Villeurbanne 69100 France
| | - Olivier Cala
- Université Claude Bernard Lyon 1, CRMN UMR-5082, CNRS, ENS Lyon, Villeurbanne 69100 France
| | - Konstantin Ivanov
- International Tomography Center, Siberian Branch of the Russian Academy of Science, Novosibirsk 630090, Russia
- Novosibirsk State University, Novosibirsk 630090, Russia
| | - Sami Jannin
- Université Claude Bernard Lyon 1, CRMN UMR-5082, CNRS, ENS Lyon, Villeurbanne 69100 France
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16
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Praud C, Ribay V, Dey A, Charrier B, Mandral J, Farjon J, Dumez JN, Giraudeau P. Optimization of heteronuclear ultrafast 2D NMR for the study of complex mixtures hyperpolarized by dynamic nuclear polarization. ANALYTICAL METHODS : ADVANCING METHODS AND APPLICATIONS 2023; 15:6209-6219. [PMID: 37942549 DOI: 10.1039/d3ay01681a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/10/2023]
Abstract
Hyperpolarized 13C NMR at natural abundance, based on dissolution dynamic nuclear polarization (d-DNP), provides rich, sensitive and repeatable 13C NMR fingerprints of complex mixtures. However, the sensitivity enhancement is associated with challenges such as peak overlap and the difficulty to assign hyperpolarized 13C signals. Ultrafast (UF) 2D NMR spectroscopy makes it possible to record heteronuclear 2D maps of d-DNP hyperpolarized samples. Heteronuclear UF 2D NMR can provide correlation peaks that link quaternary carbons and protons through long-range scalar couplings. Here, we report the analytical assessment of an optimized UF long-range HETCOR pulse sequence, applied to the detection of metabolic mixtures at natural abundance and hyperpolarized by d-DNP, based on repeatability and sensitivity considerations. We show that metabolite-dependent limits of quantification in the range of 1-50 mM (in the sample before dissolution) can be achieved, with a repeatability close to 10% and a very good linearity. We provide a detailed comparison of such analytical performance in two different dissolution solvents, D2O and MeOD. The reported pulse sequence appears as an useful analytical tool to facilitate the assignment and integration of metabolite signals in hyperpolarized complex mixtures.
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Affiliation(s)
- Clément Praud
- Nantes Université, CNRS, CEISAM, UMR 6230, F-44000 Nantes, France.
| | - Victor Ribay
- Nantes Université, CNRS, CEISAM, UMR 6230, F-44000 Nantes, France.
| | - Arnab Dey
- Nantes Université, CNRS, CEISAM, UMR 6230, F-44000 Nantes, France.
| | - Benoît Charrier
- Nantes Université, CNRS, CEISAM, UMR 6230, F-44000 Nantes, France.
| | - Joris Mandral
- Nantes Université, CNRS, CEISAM, UMR 6230, F-44000 Nantes, France.
| | - Jonathan Farjon
- Nantes Université, CNRS, CEISAM, UMR 6230, F-44000 Nantes, France.
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17
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Dos Santos K, Bertho G, Caradeuc C, Baud V, Montagne A, Abergel D, Giraud N, Baudin M. A Toolbox for Glutamine Use in Dissolution Dynamic Nuclear Polarization: from Enzymatic Reaction Monitoring to the Study of Cellular Metabolic Pathways and Imaging. Chemphyschem 2023; 24:e202300151. [PMID: 36973178 DOI: 10.1002/cphc.202300151] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2023] [Revised: 03/25/2023] [Accepted: 03/27/2023] [Indexed: 03/29/2023]
Abstract
Glutamine is under scrutiny regarding its metabolic deregulation linked to energetic reprogramming in cancer cells. Many analytical techniques have been used to better understand the impact of the metabolism of amino acids on biological processes, however only a few are suited to work with complex samples. Here, we report the use of a general dissolution dynamic nuclear polarization (D-DNP) formulation using an unexpensive radical as a multipurpose tool to study glutamine, with insights from enzymatic modelling to complex metabolic networks and fast imaging. First, hyperpolarized [5-13 C] glutamine is used as molecular probe to study the kinetic action of two enzymes: L-asparaginase that has been used as an anti-metabolic treatment for cancer, and glutaminase. These results are also compared with those acquired with another hyperpolarized amino acid, [1,4-13 C] asparagine. Second, we explored the use of hyperpolarized (HP) substrates to probe metabolic pathways by monitoring metabolic profiles arising from hyperpolarized glutamine in E. coli extracts. Finally, a highly concentrated sample formulation is proposed for the purpose of fast imaging applications. We think that this approach can be extended to formulate other amino acids as well as other metabolites and provide complementary insights into the analysis of metabolic networks.
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Affiliation(s)
- Karen Dos Santos
- Laboratoire de Chimie et Biochimie Pharmacologiques et Toxicologiques, Université Paris Cité, 45, Rue des Saints Pères, 75006, Paris, France
| | - Gildas Bertho
- Laboratoire de Chimie et Biochimie Pharmacologiques et Toxicologiques, Université Paris Cité, 45, Rue des Saints Pères, 75006, Paris, France
| | - Cédric Caradeuc
- Laboratoire de Chimie et Biochimie Pharmacologiques et Toxicologiques, Université Paris Cité, 45, Rue des Saints Pères, 75006, Paris, France
| | - Véronique Baud
- Laboratoire NF-κB, Différenciation et Cancer, Université Paris Cité, 24, Rue du faubourg Saint Jacques, 75014, Paris, France
| | - Aurélie Montagne
- Laboratoire NF-κB, Différenciation et Cancer, Université Paris Cité, 24, Rue du faubourg Saint Jacques, 75014, Paris, France
| | - Daniel Abergel
- Laboratoire des Biomolécules, LBM, Département de chimie, École Normale Supérieure, PSL Université, Sorbonne Université, 45 Rue d'Ulm, 75005, Paris, France
| | - Nicolas Giraud
- Laboratoire de Chimie et Biochimie Pharmacologiques et Toxicologiques, Université Paris Cité, 45, Rue des Saints Pères, 75006, Paris, France
| | - Mathieu Baudin
- Laboratoire de Chimie et Biochimie Pharmacologiques et Toxicologiques, Université Paris Cité, 45, Rue des Saints Pères, 75006, Paris, France
- Laboratoire des Biomolécules, LBM, Département de chimie, École Normale Supérieure, PSL Université, Sorbonne Université, 45 Rue d'Ulm, 75005, Paris, France
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18
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Stevanato G, Ding Y, Mamone S, Jagtap AP, Korchak S, Glöggler S. Real-Time Pyruvate Chemical Conversion Monitoring Enabled by PHIP. J Am Chem Soc 2023; 145:5864-5871. [PMID: 36857108 PMCID: PMC10021011 DOI: 10.1021/jacs.2c13198] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/02/2023]
Abstract
In recent years, parahydrogen-induced polarization side arm hydrogenation (PHIP-SAH) has been applied to hyperpolarize [1-13C]pyruvate and map its metabolic conversion to [1-13C]lactate in cancer cells. Developing on our recent MINERVA pulse sequence protocol, in which we have achieved 27% [1-13C]pyruvate carbon polarization, we demonstrate the hyperpolarization of [1,2-13C]pyruvate (∼7% polarization on each 13C spin) via PHIP-SAH. By altering a single parameter in the pulse sequence, MINERVA enables the signal enhancement of C1 and/or C2 in [1,2-13C]pyruvate with the opposite phase, which allows for the simultaneous monitoring of different chemical reactions with enhanced spectral contrast or for the same reaction via different carbon sites. We first demonstrate the ability to monitor the same enzymatic pyruvate to lactate conversion at 7T in an aqueous solution, in vitro, and in-cell (HeLa cells) via different carbon sites. In a second set of experiments, we use the C1 and C2 carbon positions as spectral probes for simultaneous chemical reactions: the production of acetate, carbon dioxide, bicarbonate, and carbonate by reacting [1,2-13C]pyruvate with H2O2 at a high temperature (55 °C). Importantly, we detect and characterize the intermediate 2-hydroperoxy-2-hydroxypropanoate in real time and at high temperature.
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Affiliation(s)
- Gabriele Stevanato
- NMR Signal Enhancement Group, Max Planck Institute for Multidisciplinary Sciences, Am Fassberg 11, 37077 Göttingen, Germany.,Center for Biostructural Imaging of Neurodegeneration of the University Medical Center Göttingen, Von-Siebold-Street 3A, 37075 Göttingen, Germany
| | - Yonghong Ding
- NMR Signal Enhancement Group, Max Planck Institute for Multidisciplinary Sciences, Am Fassberg 11, 37077 Göttingen, Germany.,Center for Biostructural Imaging of Neurodegeneration of the University Medical Center Göttingen, Von-Siebold-Street 3A, 37075 Göttingen, Germany
| | - Salvatore Mamone
- NMR Signal Enhancement Group, Max Planck Institute for Multidisciplinary Sciences, Am Fassberg 11, 37077 Göttingen, Germany.,Center for Biostructural Imaging of Neurodegeneration of the University Medical Center Göttingen, Von-Siebold-Street 3A, 37075 Göttingen, Germany
| | - Anil P Jagtap
- NMR Signal Enhancement Group, Max Planck Institute for Multidisciplinary Sciences, Am Fassberg 11, 37077 Göttingen, Germany.,Center for Biostructural Imaging of Neurodegeneration of the University Medical Center Göttingen, Von-Siebold-Street 3A, 37075 Göttingen, Germany
| | - Sergey Korchak
- NMR Signal Enhancement Group, Max Planck Institute for Multidisciplinary Sciences, Am Fassberg 11, 37077 Göttingen, Germany.,Center for Biostructural Imaging of Neurodegeneration of the University Medical Center Göttingen, Von-Siebold-Street 3A, 37075 Göttingen, Germany
| | - Stefan Glöggler
- NMR Signal Enhancement Group, Max Planck Institute for Multidisciplinary Sciences, Am Fassberg 11, 37077 Göttingen, Germany.,Center for Biostructural Imaging of Neurodegeneration of the University Medical Center Göttingen, Von-Siebold-Street 3A, 37075 Göttingen, Germany
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19
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Eills J, Budker D, Cavagnero S, Chekmenev EY, Elliott SJ, Jannin S, Lesage A, Matysik J, Meersmann T, Prisner T, Reimer JA, Yang H, Koptyug IV. Spin Hyperpolarization in Modern Magnetic Resonance. Chem Rev 2023; 123:1417-1551. [PMID: 36701528 PMCID: PMC9951229 DOI: 10.1021/acs.chemrev.2c00534] [Citation(s) in RCA: 91] [Impact Index Per Article: 91.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2022] [Indexed: 01/27/2023]
Abstract
Magnetic resonance techniques are successfully utilized in a broad range of scientific disciplines and in various practical applications, with medical magnetic resonance imaging being the most widely known example. Currently, both fundamental and applied magnetic resonance are enjoying a major boost owing to the rapidly developing field of spin hyperpolarization. Hyperpolarization techniques are able to enhance signal intensities in magnetic resonance by several orders of magnitude, and thus to largely overcome its major disadvantage of relatively low sensitivity. This provides new impetus for existing applications of magnetic resonance and opens the gates to exciting new possibilities. In this review, we provide a unified picture of the many methods and techniques that fall under the umbrella term "hyperpolarization" but are currently seldom perceived as integral parts of the same field. Specifically, before delving into the individual techniques, we provide a detailed analysis of the underlying principles of spin hyperpolarization. We attempt to uncover and classify the origins of hyperpolarization, to establish its sources and the specific mechanisms that enable the flow of polarization from a source to the target spins. We then give a more detailed analysis of individual hyperpolarization techniques: the mechanisms by which they work, fundamental and technical requirements, characteristic applications, unresolved issues, and possible future directions. We are seeing a continuous growth of activity in the field of spin hyperpolarization, and we expect the field to flourish as new and improved hyperpolarization techniques are implemented. Some key areas for development are in prolonging polarization lifetimes, making hyperpolarization techniques more generally applicable to chemical/biological systems, reducing the technical and equipment requirements, and creating more efficient excitation and detection schemes. We hope this review will facilitate the sharing of knowledge between subfields within the broad topic of hyperpolarization, to help overcome existing challenges in magnetic resonance and enable novel applications.
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Affiliation(s)
- James Eills
- Institute
for Bioengineering of Catalonia, Barcelona
Institute of Science and Technology, 08028Barcelona, Spain
| | - Dmitry Budker
- Johannes
Gutenberg-Universität Mainz, 55128Mainz, Germany
- Helmholtz-Institut,
GSI Helmholtzzentrum für Schwerionenforschung, 55128Mainz, Germany
- Department
of Physics, UC Berkeley, Berkeley, California94720, United States
| | - Silvia Cavagnero
- Department
of Chemistry, University of Wisconsin, Madison, Madison, Wisconsin53706, United States
| | - Eduard Y. Chekmenev
- Department
of Chemistry, Integrative Biosciences (IBio), Karmanos Cancer Institute
(KCI), Wayne State University, Detroit, Michigan48202, United States
- Russian
Academy of Sciences, Moscow119991, Russia
| | - Stuart J. Elliott
- Molecular
Sciences Research Hub, Imperial College
London, LondonW12 0BZ, United Kingdom
| | - Sami Jannin
- Centre
de RMN à Hauts Champs de Lyon, Université
de Lyon, CNRS, ENS Lyon, Université Lyon 1, 69100Villeurbanne, France
| | - Anne Lesage
- Centre
de RMN à Hauts Champs de Lyon, Université
de Lyon, CNRS, ENS Lyon, Université Lyon 1, 69100Villeurbanne, France
| | - Jörg Matysik
- Institut
für Analytische Chemie, Universität
Leipzig, Linnéstr. 3, 04103Leipzig, Germany
| | - Thomas Meersmann
- Sir
Peter Mansfield Imaging Centre, University Park, School of Medicine, University of Nottingham, NottinghamNG7 2RD, United Kingdom
| | - Thomas Prisner
- Institute
of Physical and Theoretical Chemistry and Center of Biomolecular Magnetic
Resonance, Goethe University Frankfurt, , 60438Frankfurt
am Main, Germany
| | - Jeffrey A. Reimer
- Department
of Chemical and Biomolecular Engineering, UC Berkeley, and Materials Science Division, Lawrence Berkeley National
Laboratory, Berkeley, California94720, United States
| | - Hanming Yang
- Department
of Chemistry, University of Wisconsin, Madison, Madison, Wisconsin53706, United States
| | - Igor V. Koptyug
- International Tomography Center, Siberian
Branch of the Russian Academy
of Sciences, 630090Novosibirsk, Russia
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20
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Nishimura K, Yabuki R, Hamachi T, Kimizuka N, Tateishi K, Uesaka T, Yanai N. Dynamic Electron Polarization Lasting More Than 10 μs by Hybridizing Porphyrin and TEMPO with Flexible Linkers. J Phys Chem B 2023; 127:1219-1228. [PMID: 36717096 DOI: 10.1021/acs.jpcb.2c07936] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
Abstract
Dynamic electron polarization (DEP), induced by quenching of photoexcited species by stable radicals, can hyperpolarize electron spins in solution at room temperature. Recently, development of technologies based on electron spin polarization such as dynamic nuclear polarization (DNP) has been progressing, where it is important to design molecules that achieve long-lasting DEP in addition to high DEP. Hybridization by linking dyes and radicals is a promising approach for efficient DEP, but strong interactions between neighboring dyes and radicals often result in the rapid decay of DEP. In this study, we introduce a flexible linker into the hybrid system of porphyrin and TEMPO to achieve both efficient DEP and long-lasting DEP. The structural flexibility of the linker switches the interaction between the radical and the triplet, which promotes the DEP process by bringing the radical and the triplet into close proximity, while avoiding abrupt relaxation due to strong interactions. As a result, the new hybridized system exhibits a larger DEP than the unlinked system, while at the same time achieving a DEP lasting more than 10 μs.
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Affiliation(s)
- Koki Nishimura
- Department of Chemistry and Biochemistry, Graduate School of Engineering, Center for Molecular Systems (CMS), Kyushu University, 744 Moto-oka, Nishi-ku, Fukuoka819-0395, Japan
| | - Reiya Yabuki
- Department of Chemistry and Biochemistry, Graduate School of Engineering, Center for Molecular Systems (CMS), Kyushu University, 744 Moto-oka, Nishi-ku, Fukuoka819-0395, Japan
| | - Tomoyuki Hamachi
- Department of Chemistry and Biochemistry, Graduate School of Engineering, Center for Molecular Systems (CMS), Kyushu University, 744 Moto-oka, Nishi-ku, Fukuoka819-0395, Japan
| | - Nobuo Kimizuka
- Department of Chemistry and Biochemistry, Graduate School of Engineering, Center for Molecular Systems (CMS), Kyushu University, 744 Moto-oka, Nishi-ku, Fukuoka819-0395, Japan
| | - Kenichiro Tateishi
- Cluster for Pioneering Research, RIKEN, RIKEN Nishina Center for Accelerator-Based Science, 2-1 Hirosawa, Wako, Saitama351-0198, Japan
| | - Tomohiro Uesaka
- Cluster for Pioneering Research, RIKEN, RIKEN Nishina Center for Accelerator-Based Science, 2-1 Hirosawa, Wako, Saitama351-0198, Japan
| | - Nobuhiro Yanai
- Department of Chemistry and Biochemistry, Graduate School of Engineering, Center for Molecular Systems (CMS), Kyushu University, 744 Moto-oka, Nishi-ku, Fukuoka819-0395, Japan
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21
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Picazo-Frutos R, Stern Q, Blanchard JW, Cala O, Ceillier M, Cousin SF, Eills J, Elliott SJ, Jannin S, Budker D. Zero- to Ultralow-Field Nuclear Magnetic Resonance Enhanced with Dissolution Dynamic Nuclear Polarization. Anal Chem 2023; 95:720-729. [PMID: 36563171 DOI: 10.1021/acs.analchem.2c02649] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Abstract
Zero- to ultralow-field nuclear magnetic resonance is a modality of magnetic resonance experiment which does not require strong superconducting magnets. Contrary to conventional high-field nuclear magnetic resonance, it has the advantage of allowing high-resolution detection of nuclear magnetism through metal as well as within heterogeneous media. To achieve high sensitivity, it is common to couple zero-field nuclear magnetic resonance with hyperpolarization techniques. To date, the most common technique is parahydrogen-induced polarization, which is only compatible with a small number of compounds. In this article, we establish dissolution dynamic nuclear polarization as a versatile method to enhance signals in zero-field nuclear magnetic resonance experiments on sample mixtures of [13C]sodium formate, [1-13C]glycine, and [2-13C]sodium acetate, and our technique is immediately extendable to a broad range of molecules with >1 s relaxation times. We find signal enhancements of up to 11,000 compared with thermal prepolarization in a 2 T permanent magnet. To increase the signal in future experiments, we investigate the relaxation effects of the TEMPOL radicals used for the hyperpolarization process at zero- and ultralow-fields.
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Affiliation(s)
- Román Picazo-Frutos
- Helmholtz-Institut Mainz, GSI Helmholtzzentrum für Schwerionenforschung, Mainz55128, Germany.,Johannes Gutenberg-Universität Mainz, Mainz55128, Germany
| | - Quentin Stern
- Univ Lyon, CNRS, ENS Lyon, UCBL, Université de Lyon, CRMN UMR 5280, 69100Villeurbanne, France
| | - John W Blanchard
- Helmholtz-Institut Mainz, GSI Helmholtzzentrum für Schwerionenforschung, Mainz55128, Germany
| | - Olivier Cala
- Univ Lyon, CNRS, ENS Lyon, UCBL, Université de Lyon, CRMN UMR 5280, 69100Villeurbanne, France
| | - Morgan Ceillier
- Univ Lyon, CNRS, ENS Lyon, UCBL, Université de Lyon, CRMN UMR 5280, 69100Villeurbanne, France
| | | | - James Eills
- Helmholtz-Institut Mainz, GSI Helmholtzzentrum für Schwerionenforschung, Mainz55128, Germany.,Johannes Gutenberg-Universität Mainz, Mainz55128, Germany.,Institute for Bioengineering of Catalonia, Baldiri Reixac 10-12, Barcelona08028, Spain
| | - Stuart J Elliott
- Univ Lyon, CNRS, ENS Lyon, UCBL, Université de Lyon, CRMN UMR 5280, 69100Villeurbanne, France.,Molecular Sciences Research Hub, Imperial College London, LondonW12 0BZ, U.K
| | - Sami Jannin
- Univ Lyon, CNRS, ENS Lyon, UCBL, Université de Lyon, CRMN UMR 5280, 69100Villeurbanne, France
| | - Dmitry Budker
- Helmholtz-Institut Mainz, GSI Helmholtzzentrum für Schwerionenforschung, Mainz55128, Germany.,Johannes Gutenberg-Universität Mainz, Mainz55128, Germany
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22
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Dumez JN. NMR methods for the analysis of mixtures. Chem Commun (Camb) 2022; 58:13855-13872. [PMID: 36458684 PMCID: PMC9753098 DOI: 10.1039/d2cc05053f] [Citation(s) in RCA: 17] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/13/2022] [Accepted: 10/19/2022] [Indexed: 07/31/2023]
Abstract
NMR spectroscopy is a powerful approach for the analysis of mixtures. Its usefulness arises in large part from the vast landscape of methods, and corresponding pulse sequences, that have been and are being designed to tackle the specific properties of mixtures of small molecules. This feature article describes a selection of methods that aim to address the complexity, the low concentrations, and the changing nature that mixtures can display. These notably include pure-shift and diffusion NMR methods, hyperpolarisation methods, and fast 2D NMR methods such as ultrafast 2D NMR and non-uniform sampling. Examples or applications are also described, in fields such as reaction monitoring and metabolomics, to illustrate the relevance and limitations of different methods.
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23
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Jurkutat M, Kouřilová H, Peat D, Kouřil K, Khan AS, Horsewill AJ, MacDonald JF, Owers-Bradley J, Meier B. Radical-Induced Low-Field 1H Relaxation in Solid Pyruvic Acid Doped with Trityl-OX063. J Phys Chem Lett 2022; 13:10370-10376. [PMID: 36316011 PMCID: PMC9661535 DOI: 10.1021/acs.jpclett.2c02357] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/29/2022] [Accepted: 09/30/2022] [Indexed: 06/16/2023]
Abstract
In dynamic nuclear polarization (DNP), radicals such as trityl provide a source for high nuclear spin polarization. Conversely, during the low-field transfer of hyperpolarized solids, the radicals' dipolar or Non-Zeeman reservoir may act as a powerful nuclear polarization sink. Here, we report the low-temperature proton spin relaxation in pyruvic acid doped with trityl, for fields from 5 mT to 2 T. We estimate the heat capacity of the radical Non-Zeeman reservoir experimentally and show that a recent formalism by Wenckebach yields a parameter-free, yet quantitative model for the entire field range.
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Affiliation(s)
- Michael Jurkutat
- Institute
of Biological Interfaces 4, Karlsruhe Institute
of Technology, Eggenstein-Leopoldshafen76344, Germany
| | - Hana Kouřilová
- Institute
of Biological Interfaces 4, Karlsruhe Institute
of Technology, Eggenstein-Leopoldshafen76344, Germany
| | - David Peat
- School
of Physics and Astronomy, University of
Nottingham, NottinghamNG7 2RD, U.K.
| | - Karel Kouřil
- Institute
of Biological Interfaces 4, Karlsruhe Institute
of Technology, Eggenstein-Leopoldshafen76344, Germany
| | - Alixander S. Khan
- School
of Physics and Astronomy, University of
Nottingham, NottinghamNG7 2RD, U.K.
| | - Anthony J. Horsewill
- School
of Physics and Astronomy, University of
Nottingham, NottinghamNG7 2RD, U.K.
| | - James F. MacDonald
- School
of Physics and Astronomy, University of
Nottingham, NottinghamNG7 2RD, U.K.
| | - John Owers-Bradley
- School
of Physics and Astronomy, University of
Nottingham, NottinghamNG7 2RD, U.K.
| | - Benno Meier
- Institute
of Biological Interfaces 4, Karlsruhe Institute
of Technology, Eggenstein-Leopoldshafen76344, Germany
- Institute
of Physical Chemistry, Karlsruhe Institute
of Technology, Karlsruhe76131, Germany
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24
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Theillet FX, Luchinat E. In-cell NMR: Why and how? PROGRESS IN NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY 2022; 132-133:1-112. [PMID: 36496255 DOI: 10.1016/j.pnmrs.2022.04.002] [Citation(s) in RCA: 20] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/15/2021] [Revised: 04/19/2022] [Accepted: 04/27/2022] [Indexed: 06/17/2023]
Abstract
NMR spectroscopy has been applied to cells and tissues analysis since its beginnings, as early as 1950. We have attempted to gather here in a didactic fashion the broad diversity of data and ideas that emerged from NMR investigations on living cells. Covering a large proportion of the periodic table, NMR spectroscopy permits scrutiny of a great variety of atomic nuclei in all living organisms non-invasively. It has thus provided quantitative information on cellular atoms and their chemical environment, dynamics, or interactions. We will show that NMR studies have generated valuable knowledge on a vast array of cellular molecules and events, from water, salts, metabolites, cell walls, proteins, nucleic acids, drugs and drug targets, to pH, redox equilibria and chemical reactions. The characterization of such a multitude of objects at the atomic scale has thus shaped our mental representation of cellular life at multiple levels, together with major techniques like mass-spectrometry or microscopies. NMR studies on cells has accompanied the developments of MRI and metabolomics, and various subfields have flourished, coined with appealing names: fluxomics, foodomics, MRI and MRS (i.e. imaging and localized spectroscopy of living tissues, respectively), whole-cell NMR, on-cell ligand-based NMR, systems NMR, cellular structural biology, in-cell NMR… All these have not grown separately, but rather by reinforcing each other like a braided trunk. Hence, we try here to provide an analytical account of a large ensemble of intricately linked approaches, whose integration has been and will be key to their success. We present extensive overviews, firstly on the various types of information provided by NMR in a cellular environment (the "why", oriented towards a broad readership), and secondly on the employed NMR techniques and setups (the "how", where we discuss the past, current and future methods). Each subsection is constructed as a historical anthology, showing how the intrinsic properties of NMR spectroscopy and its developments structured the accessible knowledge on cellular phenomena. Using this systematic approach, we sought i) to make this review accessible to the broadest audience and ii) to highlight some early techniques that may find renewed interest. Finally, we present a brief discussion on what may be potential and desirable developments in the context of integrative studies in biology.
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Affiliation(s)
- Francois-Xavier Theillet
- Université Paris-Saclay, CEA, CNRS, Institute for Integrative Biology of the Cell (I2BC), 91198 Gif-sur-Yvette, France.
| | - Enrico Luchinat
- Dipartimento di Scienze e Tecnologie Agro-Alimentari, Alma Mater Studiorum - Università di Bologna, Piazza Goidanich 60, 47521 Cesena, Italy; CERM - Magnetic Resonance Center, and Neurofarba Department, Università degli Studi di Firenze, 50019 Sesto Fiorentino, Italy
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25
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Dey A, Charrier B, Lemaitre K, Ribay V, Eshchenko D, Schnell M, Melzi R, Stern Q, Cousin S, Kempf J, Jannin S, Dumez JN, Giraudeau P. Fine optimization of a dissolution dynamic nuclear polarization experimental setting for 13C NMR of metabolic samples. MAGNETIC RESONANCE (GOTTINGEN, GERMANY) 2022; 3:183-202. [PMID: 37904870 PMCID: PMC10583282 DOI: 10.5194/mr-3-183-2022] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/12/2022] [Accepted: 09/16/2022] [Indexed: 11/01/2023]
Abstract
NMR-based analysis of metabolite mixtures provides crucial information on biological systems but mostly relies on 1D 1 H experiments for maximizing sensitivity. However, strong peak overlap of 1 H spectra often is a limitation for the analysis of inherently complex biological mixtures. Dissolution dynamic nuclear polarization (d-DNP) improves NMR sensitivity by several orders of magnitude, which enables 13 C NMR-based analysis of metabolites at natural abundance. We have recently demonstrated the successful introduction of d-DNP into a full untargeted metabolomics workflow applied to the study of plant metabolism. Here we describe the systematic optimization of d-DNP experimental settings for experiments at natural 13 C abundance and show how the resolution, sensitivity, and ultimately the number of detectable signals improve as a result. We have systematically optimized the parameters involved (in a semi-automated prototype d-DNP system, from sample preparation to signal detection, aiming at providing an optimization guide for potential users of such a system, who may not be experts in instrumental development). The optimization procedure makes it possible to detect previously inaccessible protonated 13 C signals of metabolites at natural abundance with at least 4 times improved line shape and a high repeatability compared to a previously reported d-DNP-enhanced untargeted metabolomic study. This extends the application scope of hyperpolarized 13 C NMR at natural abundance and paves the way to a more general use of DNP-hyperpolarized NMR in metabolomics studies.
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Affiliation(s)
- Arnab Dey
- Nantes Université, CNRS, CEISAM UMR 6230, 44000 Nantes, France
| | - Benoît Charrier
- Nantes Université, CNRS, CEISAM UMR 6230, 44000 Nantes, France
| | - Karine Lemaitre
- Nantes Université, CNRS, CEISAM UMR 6230, 44000 Nantes, France
| | - Victor Ribay
- Nantes Université, CNRS, CEISAM UMR 6230, 44000 Nantes, France
| | - Dmitry Eshchenko
- Bruker Biospin, Industriestrasse 26, 8117 Fällanden, Switzerland
| | - Marc Schnell
- Bruker Biospin, Industriestrasse 26, 8117 Fällanden, Switzerland
| | - Roberto Melzi
- Bruker Biospin, Viale V. Lancetti 43, 20158 Milan, Italy
| | - Quentin Stern
- Université de Lyon, CNRS, Université Claude Bernard Lyon 1,
ENS de Lyon, Centre de RMN à Très Hauts Champs (CRMN), UMR5082,
69100 Villeurbanne, France
| | | | | | - Sami Jannin
- Université de Lyon, CNRS, Université Claude Bernard Lyon 1,
ENS de Lyon, Centre de RMN à Très Hauts Champs (CRMN), UMR5082,
69100 Villeurbanne, France
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26
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Ferrari A, Peters J, Anikeeva M, Pravdivtsev A, Ellermann F, Them K, Will O, Peschke E, Yoshihara H, Jansen O, Hövener JB. Performance and reproducibility of 13C and 15N hyperpolarization using a cryogen-free DNP polarizer. Sci Rep 2022; 12:11694. [PMID: 35803961 PMCID: PMC9270333 DOI: 10.1038/s41598-022-15380-7] [Citation(s) in RCA: 14] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2022] [Accepted: 06/23/2022] [Indexed: 12/02/2022] Open
Abstract
The setup, operational procedures and performance of a cryogen-free device for producing hyperpolarized contrast agents using dissolution dynamic nuclear polarization (dDNP) in a preclinical imaging center is described. The polarization was optimized using the solid-state, DNP-enhanced NMR signal to calibrate the sample position, microwave and NMR frequency and power and flip angle. The polarization of a standard formulation to yield ~ 4 mL, 60 mM 1-13C-pyruvic acid in an aqueous solution was quantified in five experiments to P(13C) = (38 ± 6) % (19 ± 1) s after dissolution. The mono-exponential time constant of the build-up of the solid-state polarization was quantified to (1032 ± 22) s. We achieved a duty cycle of 1.5 h that includes sample loading, monitoring the polarization build-up, dissolution and preparation for the next run. After injection of the contrast agent in vivo, pyruvate, pyruvate hydrate, lactate, and alanine were observed, by measuring metabolite maps. Based on this work sequence, hyperpolarized 15N urea was obtained (P(15N) = (5.6 ± 0.8) % (30 ± 3) s after dissolution).
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Affiliation(s)
- Arianna Ferrari
- Section Biomedical Imaging, MOIN CC, Department of Radiology and Neuroradiology, University Medical Center Schleswig-Holstein, Kiel University, Kiel, Germany.
| | - Josh Peters
- Section Biomedical Imaging, MOIN CC, Department of Radiology and Neuroradiology, University Medical Center Schleswig-Holstein, Kiel University, Kiel, Germany
| | - Mariia Anikeeva
- Section Biomedical Imaging, MOIN CC, Department of Radiology and Neuroradiology, University Medical Center Schleswig-Holstein, Kiel University, Kiel, Germany
| | - Andrey Pravdivtsev
- Section Biomedical Imaging, MOIN CC, Department of Radiology and Neuroradiology, University Medical Center Schleswig-Holstein, Kiel University, Kiel, Germany
| | - Frowin Ellermann
- Section Biomedical Imaging, MOIN CC, Department of Radiology and Neuroradiology, University Medical Center Schleswig-Holstein, Kiel University, Kiel, Germany
| | - Kolja Them
- Section Biomedical Imaging, MOIN CC, Department of Radiology and Neuroradiology, University Medical Center Schleswig-Holstein, Kiel University, Kiel, Germany
| | - Olga Will
- Section Biomedical Imaging, MOIN CC, Department of Radiology and Neuroradiology, University Medical Center Schleswig-Holstein, Kiel University, Kiel, Germany
| | - Eva Peschke
- Section Biomedical Imaging, MOIN CC, Department of Radiology and Neuroradiology, University Medical Center Schleswig-Holstein, Kiel University, Kiel, Germany
| | - Hikari Yoshihara
- Laboratory for Functional and Metabolic Imaging, Institute of Physics, EPFL (École polytechnique fédérale de Lausanne), Lausanne, Switzerland
| | - Olav Jansen
- Department of Radiology and Neuroradiology, University Medical Center Schleswig-Holstein, Kiel University, Kiel, Germany
| | - Jan-Bernd Hövener
- Section Biomedical Imaging, MOIN CC, Department of Radiology and Neuroradiology, University Medical Center Schleswig-Holstein, Kiel University, Kiel, Germany.
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27
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Koptyug IV, Stern Q, Jannin S, Elliott SJ. Frozen water NMR lineshape analysis enables absolute polarization quantification. Phys Chem Chem Phys 2022; 24:5956-5964. [PMID: 35195621 DOI: 10.1039/d1cp05127j] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Typical magnetic resonance experiments are routinely limited by weak signal responses. In some cases, the low intrinsic sensitivity can be alleviated by the implementation of hyperpolarization technologies. Dissolution-dynamic nuclear polarization offers a means of hyperpolarizing small molecules. Hyperpolarized water is employed in several dynamic nuclear polarization studies, and hence accurate and rapid quantification of the 1H polarization level is of utmost importance. The solid-state nuclear magnetic resonance spectrum of water acquired under dissolution-dynamic nuclear polarization conditions has revealed lineshapes which become asymmetric at high levels of 1H polarization, which is an interesting fundamental problem in itself, but also complicates data interpretation and can prevent correct estimations of polarization levels achieved. In previous studies, attempts to simulate the 1H spectral lineshape of water as a function of the 1H polarization led to significant disagreement with the experimental results. Here we propose and demonstrate that such simulations, and therefore polarization quantification, can be implemented accurately, in particular by taking into account the detector dead time during 1H signal acquisition that can lead to severe spectral distortions. Based on these findings, we employed an echo-based radiofrequency pulse sequence to achieve distortion-free 1H spectra of hyperpolarized water, and adequate simulations of these echo-based spectra were implemented to extract the absolute 1H polarization level from the hyperpolarized water signal only, thus alleviating the need for lengthy and insensitive measurements of thermal equilibrium signals.
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Affiliation(s)
- Igor V Koptyug
- International Tomography Center, SB RAS, 3A Institutskaya St., Novosibirsk, 630090, Russia
| | - Quentin Stern
- Univ. Lyon, CNRS, ENS Lyon, UCBL, Université de Lyon, CRMN UMR 5280, 69100 Villeurbanne, France.
| | - Sami Jannin
- Univ. Lyon, CNRS, ENS Lyon, UCBL, Université de Lyon, CRMN UMR 5280, 69100 Villeurbanne, France.
| | - Stuart J Elliott
- Univ. Lyon, CNRS, ENS Lyon, UCBL, Université de Lyon, CRMN UMR 5280, 69100 Villeurbanne, France.
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28
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Elliott SJ, Stern Q, Cala O, Jannin S. Protonation tuned dipolar order mediated 1H→ 13C cross-polarization for dissolution-dynamic nuclear polarization experiments. SOLID STATE NUCLEAR MAGNETIC RESONANCE 2021; 116:101762. [PMID: 34823210 DOI: 10.1016/j.ssnmr.2021.101762] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/18/2021] [Revised: 10/12/2021] [Accepted: 10/13/2021] [Indexed: 06/13/2023]
Abstract
A strategy of dipolar order mediated nuclear spin polarization transfer has recently been combined with dissolution-dynamic nuclear polarization (dDNP) and improved by employing optimized shaped radiofrequency pulses and suitable molecular modifications. In the context of dDNP experiments, this offers a promising means of transferring polarization from high-gamma 1H spins to insensitive 13C spins with lower peak power and lower energy compared with state-of-the-art cross-polarization schemes. The role of local molecular groups and the glassing matrix protonation level are both postulated to play a key role in the polarization transfer pathway via an intermediary reservoir of dipolar spin order. To gain appreciation of the mechanisms involved in the dipolar order mediated polarization transfer under dDNP conditions, we investigate herein the influence of the pivotal characteristics of the sample makeup: (i) revising the protonation level for the constituents of the DNP glass; and (ii) utilizing deuterated molecular derivatives. Experimental demonstrations are presented for the case of [1-13C]sodium acetate. We find that the proton sample molarity has a large impact on both the optimal parameters and the performance of the dipolar order mediated cross-polarization sequence, with the 13C signal build-up time drastically shortened in the case of high solvent protonation levels. In the case of a deuterated molecular derivative, we observe that the nearby 2H substituted methyl group is deleterious to the 1H→13C transfer phenomenon (particularly at low levels of sample protonation). Overall, increased solvent protonation makes the dipolar order governed polarization transfer significantly faster and more efficient. This study sheds light on the influential sample formulation traits which govern the dipolar order-controlled transfer of polarization and indicates that the polarization transfer efficiencies of deuterated molecules can be boosted and reach high performances simply by adequate solvent protonation.
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Affiliation(s)
- Stuart J Elliott
- Univ. Lyon, CNRS, ENS Lyon, UCBL, Université de Lyon, CRMN UMR 5280, 69100, Villeurbanne, France.
| | - Quentin Stern
- Univ. Lyon, CNRS, ENS Lyon, UCBL, Université de Lyon, CRMN UMR 5280, 69100, Villeurbanne, France
| | - Olivier Cala
- Univ. Lyon, CNRS, ENS Lyon, UCBL, Université de Lyon, CRMN UMR 5280, 69100, Villeurbanne, France
| | - Sami Jannin
- Univ. Lyon, CNRS, ENS Lyon, UCBL, Université de Lyon, CRMN UMR 5280, 69100, Villeurbanne, France
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29
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Elliott S, Stern Q, Jannin S. Solid-state 1H spin polarimetry by 13CH 3 nuclear magnetic resonance. MAGNETIC RESONANCE (GOTTINGEN, GERMANY) 2021; 2:643-652. [PMID: 37905218 PMCID: PMC10539844 DOI: 10.5194/mr-2-643-2021] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/26/2021] [Accepted: 08/02/2021] [Indexed: 11/01/2023]
Abstract
Dissolution dynamic nuclear polarization is used to prepare nuclear spin polarizations approaching unity. At present, 1 H polarization quantification in the solid state remains fastidious due to the requirement of measuring thermal equilibrium signals. Line shape polarimetry of solid-state nuclear magnetic resonance spectra is used to determine several useful properties regarding the spin system under investigation. In the case of highly polarized nuclear spins, such as those prepared under the conditions of dissolution dynamic nuclear polarization experiments, the absolute polarization of a particular isotopic species within the sample may be directly inferred from the characteristics of the corresponding resonance line shape. In situations where direct measurements of polarization are complicated by deleterious phenomena, indirect estimates of polarization using coupled heteronuclear spins prove informative. We present a simple analysis of the 13 C spectral line shape of [2-13 C]sodium acetate based on the normalized deviation of the centre of gravity of the 13 C peaks, which can be used to indirectly evaluate the proton polarization of the methyl group moiety and very likely the entire sample in the case of rapid and homogeneous 1 H-1 H spin diffusion. For the case of positive microwave irradiation, 1 H polarization was found to increase with an increasing normalized centre of gravity deviation. These results suggest that, as a dopant, [2-13 C]sodium acetate could be used to indirectly gauge 1 H polarizations in standard sample formulations, which is potentially advantageous for (i) samples polarized in commercial dissolution dynamic nuclear polarization devices that lack 1 H radiofrequency hardware, (ii) measurements that are deleteriously influenced by radiation damping or complicated by the presence of large background signals and (iii) situations where the acquisition of a thermal equilibrium spectrum is not feasible.
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Affiliation(s)
- Stuart J. Elliott
- Centre de Résonance Magnétique Nucléaire à Très
Hauts Champs – FRE 2034 Université de Lyon/CNRS/Université
Claude Bernard Lyon 1/ENS de Lyon, 5 Rue de la Doua, 69100 Villeurbanne,
France
- current address: Department of Chemistry, University of Liverpool, Liverpool L69 7ZD, United Kingdom
| | - Quentin Stern
- Centre de Résonance Magnétique Nucléaire à Très
Hauts Champs – FRE 2034 Université de Lyon/CNRS/Université
Claude Bernard Lyon 1/ENS de Lyon, 5 Rue de la Doua, 69100 Villeurbanne,
France
| | - Sami Jannin
- Centre de Résonance Magnétique Nucléaire à Très
Hauts Champs – FRE 2034 Université de Lyon/CNRS/Université
Claude Bernard Lyon 1/ENS de Lyon, 5 Rue de la Doua, 69100 Villeurbanne,
France
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30
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Singh K, Jacquemmoz C, Giraudeau P, Frydman L, Dumez JN. Ultrafast 2D 1H- 1H NMR spectroscopy of DNP-hyperpolarised substrates for the analysis of mixtures. Chem Commun (Camb) 2021; 57:8035-8038. [PMID: 34291258 PMCID: PMC8477446 DOI: 10.1039/d1cc03079e] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/10/2021] [Accepted: 07/15/2021] [Indexed: 01/22/2023]
Abstract
We show that TOCSY and multiple-quantum (MQ) 2D NMR spectra can be obtained for mixtures of substrates hyperpolarised by dissolution dynamic nuclear polarisation (D-DNP). This is achieved by combining optimised transfer settings for D-DNP, with ultrafast 2D NMR experiments based on spatiotemporal encoding. TOCSY and MQ experiments are particularly well suited for mixture analysis, and this approach opens the way to significant sensitivity gains for analytical applications of NMR, such as authentication and metabolomics.
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Affiliation(s)
- Kawarpal Singh
- Department of Chemical and Biological Physics, Weizmann Institute of Science, Rehovot, 7610001, Israel.
| | | | | | - Lucio Frydman
- Department of Chemical and Biological Physics, Weizmann Institute of Science, Rehovot, 7610001, Israel.
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31
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El Daraï T, Cousin SF, Stern Q, Ceillier M, Kempf J, Eshchenko D, Melzi R, Schnell M, Gremillard L, Bornet A, Milani J, Vuichoud B, Cala O, Montarnal D, Jannin S. Porous functionalized polymers enable generating and transporting hyperpolarized mixtures of metabolites. Nat Commun 2021; 12:4695. [PMID: 34349114 PMCID: PMC8338986 DOI: 10.1038/s41467-021-24279-2] [Citation(s) in RCA: 19] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2021] [Accepted: 06/03/2021] [Indexed: 02/07/2023] Open
Abstract
Hyperpolarization by dissolution dynamic nuclear polarization (dDNP) has enabled promising applications in spectroscopy and imaging, but remains poorly widespread due to experimental complexity. Broad democratization of dDNP could be realized by remote preparation and distribution of hyperpolarized samples from dedicated facilities. Here we show the synthesis of hyperpolarizing polymers (HYPOPs) that can generate radical- and contaminant-free hyperpolarized samples within minutes with lifetimes exceeding hours in the solid state. HYPOPs feature tunable macroporous porosity, with porous volumes up to 80% and concentration of nitroxide radicals grafted in the bulk matrix up to 285 μmol g-1. Analytes can be efficiently impregnated as aqueous/alcoholic solutions and hyperpolarized up to P(13C) = 25% within 8 min, through the combination of 1H spin diffusion and 1H → 13C cross polarization. Solutions of 13C-analytes of biological interest hyperpolarized in HYPOPs display a very long solid-state 13C relaxation times of 5.7 h at 3.8 K, thus prefiguring transportation over long distances.
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Affiliation(s)
- Théo El Daraï
- Université de Lyon, Centre de RMN à Très Hauts Champs de Lyon, UMR5082 - CNRS/UCBL/ENS de Lyon, Villeurbanne, France
- Université de Lyon, CPE Lyon, CNRS, Catalyse, Chimie, Polymères et Procédés, UMR 5265, Lyon, France
| | - Samuel F Cousin
- Université de Lyon, Centre de RMN à Très Hauts Champs de Lyon, UMR5082 - CNRS/UCBL/ENS de Lyon, Villeurbanne, France.
| | - Quentin Stern
- Université de Lyon, Centre de RMN à Très Hauts Champs de Lyon, UMR5082 - CNRS/UCBL/ENS de Lyon, Villeurbanne, France
| | - Morgan Ceillier
- Université de Lyon, Centre de RMN à Très Hauts Champs de Lyon, UMR5082 - CNRS/UCBL/ENS de Lyon, Villeurbanne, France
| | | | | | | | | | - Laurent Gremillard
- Université de Lyon, INSA Lyon, MATEIS UMR CNRS 5510, Bât. Blaise Pascal, Villeurbanne, France
| | - Aurélien Bornet
- Université de Lyon, Centre de RMN à Très Hauts Champs de Lyon, UMR5082 - CNRS/UCBL/ENS de Lyon, Villeurbanne, France
| | - Jonas Milani
- Université de Lyon, Centre de RMN à Très Hauts Champs de Lyon, UMR5082 - CNRS/UCBL/ENS de Lyon, Villeurbanne, France
| | - Basile Vuichoud
- Université de Lyon, Centre de RMN à Très Hauts Champs de Lyon, UMR5082 - CNRS/UCBL/ENS de Lyon, Villeurbanne, France
| | - Olivier Cala
- Université de Lyon, Centre de RMN à Très Hauts Champs de Lyon, UMR5082 - CNRS/UCBL/ENS de Lyon, Villeurbanne, France
| | - Damien Montarnal
- Université de Lyon, CPE Lyon, CNRS, Catalyse, Chimie, Polymères et Procédés, UMR 5265, Lyon, France.
| | - Sami Jannin
- Université de Lyon, Centre de RMN à Très Hauts Champs de Lyon, UMR5082 - CNRS/UCBL/ENS de Lyon, Villeurbanne, France
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