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Karamanlis D, Khani MH, Schreyer HM, Zapp SJ, Mietsch M, Gollisch T. Nonlinear receptive fields evoke redundant retinal coding of natural scenes. Nature 2024:10.1038/s41586-024-08212-3. [PMID: 39567692 DOI: 10.1038/s41586-024-08212-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/11/2023] [Accepted: 10/14/2024] [Indexed: 11/22/2024]
Abstract
The role of the vertebrate retina in early vision is generally described by the efficient coding hypothesis1,2, which predicts that the retina reduces the redundancy inherent in natural scenes3 by discarding spatiotemporal correlations while preserving stimulus information4. It is unclear, however, whether the predicted decorrelation and redundancy reduction in the activity of ganglion cells, the retina's output neurons, hold under gaze shifts, which dominate the dynamics of the natural visual input5. We show here that species-specific gaze patterns in natural stimuli can drive correlated spiking responses both in and across distinct types of ganglion cells in marmoset as well as mouse retina. These concerted responses disrupt redundancy reduction to signal fixation periods with locally high spatial contrast. Model-based analyses of ganglion cell responses to natural stimuli show that the observed response correlations follow from nonlinear pooling of ganglion cell inputs. Our results indicate cell-type-specific deviations from efficient coding in retinal processing of natural gaze shifts.
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Affiliation(s)
- Dimokratis Karamanlis
- University Medical Center Göttingen, Department of Ophthalmology, Göttingen, Germany.
- Bernstein Center for Computational Neuroscience, Göttingen, Germany.
- University of Geneva, Department of Basic Neurosciences, Geneva, Switzerland.
| | - Mohammad H Khani
- University Medical Center Göttingen, Department of Ophthalmology, Göttingen, Germany
- Bernstein Center for Computational Neuroscience, Göttingen, Germany
- Institute of Molecular and Clinical Ophthalmology Basel, Basel, Switzerland
| | - Helene M Schreyer
- University Medical Center Göttingen, Department of Ophthalmology, Göttingen, Germany
- Bernstein Center for Computational Neuroscience, Göttingen, Germany
- Institute of Molecular and Clinical Ophthalmology Basel, Basel, Switzerland
| | - Sören J Zapp
- University Medical Center Göttingen, Department of Ophthalmology, Göttingen, Germany
- Bernstein Center for Computational Neuroscience, Göttingen, Germany
| | - Matthias Mietsch
- German Primate Center, Laboratory Animal Science Unit, Göttingen, Germany
- German Center for Cardiovascular Research, Partner Site Göttingen, Göttingen, Germany
| | - Tim Gollisch
- University Medical Center Göttingen, Department of Ophthalmology, Göttingen, Germany.
- Bernstein Center for Computational Neuroscience, Göttingen, Germany.
- Cluster of Excellence "Multiscale Bioimaging: from Molecular Machines to Networks of Excitable Cells" (MBExC), University of Göttingen, Göttingen, Germany.
- Else Kröner Fresenius Center for Optogenetic Therapies, University Medical Center Göttingen, Göttingen, Germany.
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2
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Ankri L, Riccitelli S, Rivlin-Etzion M. A new role for excitation in the retinal direction-selective circuit. J Physiol 2024; 602:6301-6328. [PMID: 39462912 DOI: 10.1113/jp286581] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/17/2024] [Accepted: 09/24/2024] [Indexed: 10/29/2024] Open
Abstract
A key feature of the receptive field of neurons in the visual system is their centre-surround antagonism, whereby the centre and the surround exhibit responses of opposite polarity. This organization is thought to enhance visual acuity, but whether and how such antagonism plays a role in more complex processing remains poorly understood. Here, we investigate the role of centre and surround receptive fields in retinal direction selectivity by exposing posterior-preferring On-Off direction-selective ganglion cells (pDSGCs) to adaptive light and recording their response to globally moving objects. We reveal that light adaptation leads to surround expansion in pDSGCs. The pDSGCs maintain their original directional tuning in the centre receptive field, but present the oppositely tuned response in their surround. Notably, although inhibition is the main substrate for retinal direction selectivity, we found that following light adaptation, both the centre- and surround-mediated responses originate from directionally tuned excitatory inputs. Multi-electrode array recordings show similar oppositely tuned responses in other DSGC subtypes. Together, these data attribute a new role for excitation in the direction-selective circuit. This excitation carries an antagonistic centre-surround property, possibly designed to sharpen the detection of motion direction in the retina. KEY POINTS: Receptive fields of direction-selective retinal ganglion cells expand asymmetrically following light adaptation. The increase in the surround receptive field generates a delayed spiking phase that is tuned to the null direction and is mediated by excitation. Following light adaptation, excitation rules the computation in the centre receptive field and is tuned to the preferred direction. GABAergic and glycinergic inputs modulate the null-tuned delayed response differentially. Null-tuned delayed spiking phases can be detected in all types of direction-selective retinal ganglion cells. Light adaptation exposes a hidden directional excitation in the circuit, which is tuned to opposite directions in the centre and surround receptive fields.
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Affiliation(s)
- Lea Ankri
- Department of Brain Sciences, Weizmann Institute of Science, Rehovot, Israel
| | - Serena Riccitelli
- Department of Brain Sciences, Weizmann Institute of Science, Rehovot, Israel
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3
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Bertalmío M, Durán Vizcaíno A, Malo J, Wichmann FA. Plaid masking explained with input-dependent dendritic nonlinearities. Sci Rep 2024; 14:24856. [PMID: 39438555 PMCID: PMC11496684 DOI: 10.1038/s41598-024-75471-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/27/2024] [Accepted: 10/07/2024] [Indexed: 10/25/2024] Open
Abstract
A serious obstacle for understanding early spatial vision comes from the failure of the so-called standard model (SM) to predict the perception of plaid masking. But the SM originated from a major oversimplification of single neuron computations, ignoring fundamental properties of dendrites. Here we show that a spatial vision model including computations mimicking the input-dependent nature of dendritic nonlinearities, i.e. including nonlinear neural summation, has the potential to explain plaid masking data.
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Affiliation(s)
| | | | - Jesús Malo
- Universitat de València, València, Spain
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Tucker L, Marmoy OR, Handley SE, Thompson DA. Ambient lighting alters pattern electroretinogram P50 peak time and spatial sensitivity. Doc Ophthalmol 2024; 149:77-86. [PMID: 39141280 PMCID: PMC11442543 DOI: 10.1007/s10633-024-09984-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/15/2024] [Accepted: 07/01/2024] [Indexed: 08/15/2024]
Abstract
PURPOSE Our aim was to explore the effect of ambient lighting on the pattern ERG (PERG). METHODS We compared PERGs recorded in two conditions; room lights on and room lights off. PERGs from 21 adult participants were recorded from each eye to high contrast checks of 50' side width, reversing 3rps in a large (30°) and then standard (15°) field. This was performed first in lights-ON conditions, then 2 min after the room lights were switched off. A minimum of 2 averages of 300 trials were acquired for each condition. A subset of 10 participants had PERGs recorded to a 50' check width with a range of stimulus contrasts (96-18%), also to a range of different check widths (100'-12') at high contrast in both ambient lighting conditions in a 30° field. RESULTS The lights-ON P50 median peak time (PT) was 3 ms earlier than the lights-OFF P50 from the 30° field (range 0-5 ms) and 15° field (range 0-6 ms). The earlier lights-ON P50 PT was evident at different stimulus contrasts, even after accounting for stimulus contrast reductions associated with stray ambient lighting in lights-ON conditions. Lights-OFF and lights-ON P50 PT were similar to different check widths; the lights-OFF P50 PT to a 50' check width matched the lights-ON P50 PT to a 25' check width. CONCLUSION PERG P50 PT in lights-ON ambient light conditions can be earlier than in lights-OFF ambient light conditions. The difference in P50 PT with ambient light may reflect alterations in spatial sensitivity associated with retinal adaptation. These results emphasise the clinical importance of consistent ambient lighting for PERG recording and calibration.
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Affiliation(s)
- Lisa Tucker
- Clinical and Academic Department of Ophthalmology, Tony Kriss Visual Electrophysiology Unit, Great Ormond Street Hospital for Children NHS Foundation Trust, 40-41 Queens Square, London, UK.
| | - Oliver R Marmoy
- Clinical and Academic Department of Ophthalmology, Tony Kriss Visual Electrophysiology Unit, Great Ormond Street Hospital for Children NHS Foundation Trust, 40-41 Queens Square, London, UK
- UCL Great Ormond Street Institute of Child Health, University College London, 30 Guildford Street, London, UK
| | - Siân E Handley
- Clinical and Academic Department of Ophthalmology, Tony Kriss Visual Electrophysiology Unit, Great Ormond Street Hospital for Children NHS Foundation Trust, 40-41 Queens Square, London, UK
- UCL Great Ormond Street Institute of Child Health, University College London, 30 Guildford Street, London, UK
| | - Dorothy A Thompson
- Clinical and Academic Department of Ophthalmology, Tony Kriss Visual Electrophysiology Unit, Great Ormond Street Hospital for Children NHS Foundation Trust, 40-41 Queens Square, London, UK
- UCL Great Ormond Street Institute of Child Health, University College London, 30 Guildford Street, London, UK
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Chotard V, Trapani F, Glaziou G, Sermet BS, Yger P, Marre O, Rebsam A. Altered Functional Responses of the Retina in B6 Albino Tyrc/c Mice. Invest Ophthalmol Vis Sci 2024; 65:39. [PMID: 39189994 PMCID: PMC11361382 DOI: 10.1167/iovs.65.10.39] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/29/2023] [Accepted: 08/09/2024] [Indexed: 08/28/2024] Open
Abstract
Purpose Mammals with albinism present low visual discrimination ability and different proportions of certain retinal cell subtypes. As the spatial resolution of the retina depends on the visual field sampling by retinal ganglion cells (RGCs) based on the convergence of upstream cell inputs, it could be affected in albinism and thus modify the RGC function. Methods We used the Tyrc/c line, a mouse model of oculocutaneous albinism type 1 (OCA1), carrying a tyrosinase mutation, and previously characterized by a total absence of pigment and severe visual deficits. To assess their retinal function, we recorded the light responses of hundreds of RGCs ex vivo using multi-electrode array (MEA). We estimated the receptive field (RF)-center diameter of Tyr+/c and Tyrc/c RGCs using a checkerboard stimulation before simultaneously stimulating the center and surround of RGC RFs with full-field flashes. Results Following checkerboard stimulation, the RF-center diameters of RGCs were indistinguishable between Tyrc/c and Tyr+/c retinas. Nevertheless, RGCs from Tyrc/c retinas presented more OFF responses to full-field flashes than RGCs from Tyr+/c retinas. Unlike Tyr+/c retinas, very few OFF-center RGCs switched polarity to ON or ON-OFF responses after full-field flashes in Tyrc/c retinas, suggesting a different surround suppression in these retinas. Conclusions The retinal output signal is affected in Tyrc/c retinas, despite intact RF-center diameters of their RGCs. Adaptive mechanisms during development are probably responsible for this change in RGC responses, related to the absence of ocular pigments.
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Affiliation(s)
- Virginie Chotard
- Sorbonne Université, INSERM, CNRS, Institut de la Vision, Paris, France
| | - Francesco Trapani
- Sorbonne Université, INSERM, CNRS, Institut de la Vision, Paris, France
| | - Guilhem Glaziou
- Sorbonne Université, INSERM, CNRS, Institut de la Vision, Paris, France
| | | | - Pierre Yger
- Sorbonne Université, INSERM, CNRS, Institut de la Vision, Paris, France
| | - Olivier Marre
- Sorbonne Université, INSERM, CNRS, Institut de la Vision, Paris, France
| | - Alexandra Rebsam
- Sorbonne Université, INSERM, CNRS, Institut de la Vision, Paris, France
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Wendt G, Faul F. Binocular luster elicited by isoluminant chromatic stimuli relies on mechanisms similar to those in the achromatic case. J Vis 2024; 24:7. [PMID: 38536184 PMCID: PMC10985784 DOI: 10.1167/jov.24.3.7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/12/2023] [Accepted: 02/05/2024] [Indexed: 04/04/2024] Open
Abstract
The phenomenon of binocular luster can be evoked by simple dichoptic center-surround stimuli showing a luminance contrast difference between the eyes. Previous findings support the idea that this phenomenon is mediated by a low-level conflict mechanism that integrates the monocular signals from different types of contrast detector cells. Also, isoluminant stimuli with different chromatic contrasts between eyes can trigger sensations of luster. Here, we investigate whether the lustrous impression in such purely chromatic stimuli depends on interocular contrast differences and in particular on interocular contrast polarity pairings in a similar way as in the achromatic case. In our experiments, we measured the magnitude of the lustrous response using a series of isoluminant dichoptic center-ring-surround stimuli with varying ring width whose chromatic properties were varied along the red-green and blue-yellow cardinal directions. The trends in the data were very similar to those of our former study with achromatic stimuli, indicating similar mechanisms in both cases. The empirical luster data could also be predicted fairly well by a chromatic version of our interocular conflict model (with overall R2 values between 0.577 and 0.639), for which two different receptive field models were used, simulating the behavior of color-sensitive double-opponent cells in V1.
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7
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Zhu S, Xie T, Lv Z, Leng YB, Zhang YQ, Xu R, Qin J, Zhou Y, Roy VAL, Han ST. Hierarchies in Visual Pathway: Functions and Inspired Artificial Vision. ADVANCED MATERIALS (DEERFIELD BEACH, FLA.) 2024; 36:e2301986. [PMID: 37435995 DOI: 10.1002/adma.202301986] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/02/2023] [Revised: 06/28/2023] [Accepted: 07/10/2023] [Indexed: 07/13/2023]
Abstract
The development of artificial intelligence has posed a challenge to machine vision based on conventional complementary metal-oxide semiconductor (CMOS) circuits owing to its high latency and inefficient power consumption originating from the data shuffling between memory and computation units. Gaining more insights into the function of every part of the visual pathway for visual perception can bring the capabilities of machine vision in terms of robustness and generality. Hardware acceleration of more energy-efficient and biorealistic artificial vision highly necessitates neuromorphic devices and circuits that are able to mimic the function of each part of the visual pathway. In this paper, we review the structure and function of the entire class of visual neurons from the retina to the primate visual cortex within reach (Chapter 2) are reviewed. Based on the extraction of biological principles, the recent hardware-implemented visual neurons located in different parts of the visual pathway are discussed in detail in Chapters 3 and 4. Furthermore, valuable applications of inspired artificial vision in different scenarios (Chapter 5) are provided. The functional description of the visual pathway and its inspired neuromorphic devices/circuits are expected to provide valuable insights for the design of next-generation artificial visual perception systems.
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Affiliation(s)
- Shirui Zhu
- Institute of Microscale Optoelectronics, Shenzhen University, Shenzhen, 518060, P. R. China
| | - Tao Xie
- Institute of Microscale Optoelectronics, Shenzhen University, Shenzhen, 518060, P. R. China
| | - Ziyu Lv
- College of Electronics and Information Engineering, Shenzhen University, Shenzhen, 518060, P. R. China
| | - Yan-Bing Leng
- Institute of Microscale Optoelectronics, Shenzhen University, Shenzhen, 518060, P. R. China
| | - Yu-Qi Zhang
- Institute of Microscale Optoelectronics, Shenzhen University, Shenzhen, 518060, P. R. China
| | - Runze Xu
- Institute of Microscale Optoelectronics, Shenzhen University, Shenzhen, 518060, P. R. China
| | - Jingrun Qin
- Institute of Microscale Optoelectronics, Shenzhen University, Shenzhen, 518060, P. R. China
| | - Ye Zhou
- Institute for Advanced Study, Shenzhen University, Shenzhen, 518060, P. R. China
| | - Vellaisamy A L Roy
- School of Science and Technology, Hong Kong Metropolitan University, Hong Kong, 999077, P. R. China
| | - Su-Ting Han
- College of Electronics and Information Engineering, Shenzhen University, Shenzhen, 518060, P. R. China
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Leong F, Rahmani B, Psaltis D, Moser C, Ghezzi D. An actor-model framework for visual sensory encoding. Nat Commun 2024; 15:808. [PMID: 38280912 PMCID: PMC10821921 DOI: 10.1038/s41467-024-45105-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2023] [Accepted: 01/15/2024] [Indexed: 01/29/2024] Open
Abstract
A fundamental challenge in neuroengineering is determining a proper artificial input to a sensory system that yields the desired perception. In neuroprosthetics, this process is known as artificial sensory encoding, and it holds a crucial role in prosthetic devices restoring sensory perception in individuals with disabilities. For example, in visual prostheses, one key aspect of artificial image encoding is to downsample images captured by a camera to a size matching the number of inputs and resolution of the prosthesis. Here, we show that downsampling an image using the inherent computation of the retinal network yields better performance compared to learning-free downsampling methods. We have validated a learning-based approach (actor-model framework) that exploits the signal transformation from photoreceptors to retinal ganglion cells measured in explanted mouse retinas. The actor-model framework generates downsampled images eliciting a neuronal response in-silico and ex-vivo with higher neuronal reliability than the one produced by a learning-free approach. During the learning process, the actor network learns to optimize contrast and the kernel's weights. This methodological approach might guide future artificial image encoding strategies for visual prostheses. Ultimately, this framework could be applicable for encoding strategies in other sensory prostheses such as cochlear or limb.
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Affiliation(s)
- Franklin Leong
- Medtronic Chair in Neuroengineering, Center for Neuroprosthetics and Institute of Bioengineering, School of Engineering, École Polytechnique Fédérale de Lausanne, Geneva, Switzerland
| | - Babak Rahmani
- Laboratory of Applied Photonics Devices, Institute of Electrical and Micro Engineering, School of Engineering, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland
- Microsoft Research, Cambridge, UK
| | - Demetri Psaltis
- Optics Laboratory, Institute of Electrical and Micro Engineering, School of Engineering, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland
| | - Christophe Moser
- Laboratory of Applied Photonics Devices, Institute of Electrical and Micro Engineering, School of Engineering, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland
| | - Diego Ghezzi
- Medtronic Chair in Neuroengineering, Center for Neuroprosthetics and Institute of Bioengineering, School of Engineering, École Polytechnique Fédérale de Lausanne, Geneva, Switzerland.
- Ophthalmic and Neural Technologies Laboratory, Department of Ophthalmology, University of Lausanne, Hôpital ophtalmique Jules-Gonin, Fondation Asile des Aveugles, Lausanne, Switzerland.
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Gaynes JA, Budoff SA, Grybko MJ, Poleg-Polsky A. Heterogeneous presynaptic receptive fields contribute to directional tuning in starburst amacrine cells. eLife 2023; 12:RP90456. [PMID: 38149980 PMCID: PMC10752589 DOI: 10.7554/elife.90456] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2023] Open
Abstract
The processing of visual information by retinal starburst amacrine cells (SACs) involves transforming excitatory input from bipolar cells (BCs) into directional calcium output. While previous studies have suggested that an asymmetry in the kinetic properties of BCs along the soma-dendritic axes of the postsynaptic cell could enhance directional tuning at the level of individual branches, it remains unclear whether biologically relevant presynaptic kinetics contribute to direction selectivity (DS) when visual stimulation engages the entire dendritic tree. To address this question, we built multicompartmental models of the bipolar-SAC circuit and trained them to boost directional tuning. We report that despite significant dendritic crosstalk and dissimilar directional preferences along the dendrites that occur during whole-cell stimulation, the rules that guide BC kinetics leading to optimal DS are similar to the single-dendrite condition. To correlate model predictions to empirical findings, we utilized two-photon glutamate imaging to study the dynamics of bipolar release onto ON- and OFF-starburst dendrites in the murine retina. We reveal diverse presynaptic dynamics in response to motion in both BC populations; algorithms trained on the experimental data suggested that the differences in the temporal release kinetics are likely to correspond to heterogeneous receptive field properties among the different BC types, including the spatial extent of the center and surround components. In addition, we demonstrate that circuit architecture composed of presynaptic units with experimentally recorded dynamics could enhance directional drive but not to levels that replicate empirical findings, suggesting other DS mechanisms are required to explain SAC function. Our study provides new insights into the complex mechanisms underlying DS in retinal processing and highlights the potential contribution of presynaptic kinetics to the computation of visual information by SACs.
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Affiliation(s)
- John A Gaynes
- Department of Physiology and Biophysics, University of Colorado School of MedicineAuroraUnited States
| | - Samuel A Budoff
- Department of Physiology and Biophysics, University of Colorado School of MedicineAuroraUnited States
| | - Michael J Grybko
- Department of Physiology and Biophysics, University of Colorado School of MedicineAuroraUnited States
| | - Alon Poleg-Polsky
- Department of Physiology and Biophysics, University of Colorado School of MedicineAuroraUnited States
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10
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Gaynes JA, Budoff SA, Grybko MJ, Poleg-Polsky A. Heterogeneous presynaptic receptive fields contribute to directional tuning in starburst amacrine cells. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2023:2023.08.02.551732. [PMID: 37577661 PMCID: PMC10418172 DOI: 10.1101/2023.08.02.551732] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 08/15/2023]
Abstract
The processing of visual information by retinal starburst amacrine cells (SACs) involves transforming excitatory input from bipolar cells (BCs) into directional calcium output. While previous studies have suggested that an asymmetry in the kinetic properties of bipolar cells along the soma-dendritic axes of the postsynaptic cell could enhance directional tuning at the level of individual branches, it remains unclear whether biologically relevant presynaptic kinetics contribute to direction selectivity when visual stimulation engages the entire dendritic tree. To address this question, we built multicompartmental models of the bipolar-SAC circuit and trained them to boost directional tuning. We report that despite significant dendritic crosstalk and dissimilar directional preferences along the dendrites that occur during whole-cell stimulation, the rules that guide BC kinetics leading to optimal directional selectivity are similar to the single-dendrite condition. To correlate model predictions to empirical findings, we utilized two-photon glutamate imaging to study the dynamics of bipolar release onto ON- and OFF-starburst dendrites in the murine retina. We reveal diverse presynaptic dynamics in response to motion in both BC populations; algorithms trained on the experimental data suggested that the differences in the temporal release kinetics are likely to correspond to heterogeneous receptive field (RF) properties among the different BC types, including the spatial extent of the center and surround components. In addition, we demonstrate that circuit architecture composed of presynaptic units with experimentally recorded dynamics could enhance directional drive but not to levels that replicate empirical findings, suggesting other DS mechanisms are required to explain SAC function. Our study provides new insights into the complex mechanisms underlying direction selectivity in retinal processing and highlights the potential contribution of presynaptic kinetics to the computation of visual information by starburst amacrine cells.
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Affiliation(s)
- John A. Gaynes
- Department of Physiology and Biophysics, University of Colorado School of Medicine, Aurora, CO 80045, USA
| | - Samuel A. Budoff
- Department of Physiology and Biophysics, University of Colorado School of Medicine, Aurora, CO 80045, USA
| | - Michael J. Grybko
- Department of Physiology and Biophysics, University of Colorado School of Medicine, Aurora, CO 80045, USA
| | - Alon Poleg-Polsky
- Department of Physiology and Biophysics, University of Colorado School of Medicine, Aurora, CO 80045, USA
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11
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Trapani F, Spampinato GLB, Yger P, Marre O. Differences in nonlinearities determine retinal cell types. J Neurophysiol 2023; 130:706-718. [PMID: 37584082 DOI: 10.1152/jn.00243.2022] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/15/2022] [Revised: 07/30/2023] [Accepted: 07/31/2023] [Indexed: 08/17/2023] Open
Abstract
Classifying neurons in different types is still an open challenge. In the retina, recent works have taken advantage of the ability to record from a large number of cells to classify ganglion cells into different types based on functional information. Although the first attempts in this direction used the receptive field properties of each cell to classify them, more recent approaches have proposed to cluster ganglion cells directly based on their response to stimuli. These two approaches have not been compared directly. Here, we recorded the responses of a large number of ganglion cells and compared two methods for classifying them into functional groups, one based on the receptive field properties, and the other one using directly their responses to stimuli with various temporal frequencies. We show that the response-based approach allows separation of more types than the receptive field-based method, leading to a better classification. This better granularity is due to the fact that the response-based method takes into account not only the linear part of ganglion cell function but also some of the nonlinearities. A careful characterization of nonlinear processing is thus key to allowing functional classification of sensory neurons.NEW & NOTEWORTHY In the retina, ganglion cells can be classified based on their response to visual stimuli. Although some methods are based on the modeling of receptive fields, others rely on responses to characteristic stimuli. We compared these two classes of methods and show that the latter provides a higher discrimination performance. We also show that this gain arises from the ability to account for the nonlinear behavior of neurons.
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Affiliation(s)
- Francesco Trapani
- Institut de la Vision, Sorbonne Université, INSERM, CNRS, Paris, France
| | | | - Pierre Yger
- Institut de la Vision, Sorbonne Université, INSERM, CNRS, Paris, France
| | - Olivier Marre
- Institut de la Vision, Sorbonne Université, INSERM, CNRS, Paris, France
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12
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Mani A, Yang X, Zhao TA, Leyrer ML, Schreck D, Berson DM. A circuit suppressing retinal drive to the optokinetic system during fast image motion. Nat Commun 2023; 14:5142. [PMID: 37612305 PMCID: PMC10447436 DOI: 10.1038/s41467-023-40527-z] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/14/2022] [Accepted: 07/26/2023] [Indexed: 08/25/2023] Open
Abstract
Optokinetic nystagmus (OKN) assists stabilization of the retinal image during head rotation. OKN is driven by ON direction selective retinal ganglion cells (ON DSGCs), which encode both the direction and speed of global retinal slip. The synaptic circuits responsible for the direction selectivity of ON DSGCs are well understood, but those sculpting their slow-speed preference remain enigmatic. Here, we probe this mechanism in mouse retina through patch clamp recordings, functional imaging, genetic manipulation, and electron microscopic reconstructions. We confirm earlier evidence that feedforward glycinergic inhibition is the main suppressor of ON DSGC responses to fast motion, and reveal the source for this inhibition-the VGluT3 amacrine cell, a dual neurotransmitter, excitatory/inhibitory interneuron. Together, our results identify a role for VGluT3 cells in limiting the speed range of OKN. More broadly, they suggest VGluT3 cells shape the response of many retinal cell types to fast motion, suppressing it in some while enhancing it in others.
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Affiliation(s)
- Adam Mani
- Department of Neuroscience, Brown University, Providence, RI, USA
| | - Xinzhu Yang
- Department of Neuroscience, Brown University, Providence, RI, USA
| | - Tiffany A Zhao
- Department of Neuroscience, Brown University, Providence, RI, USA
| | - Megan L Leyrer
- Department of Neuroscience, Brown University, Providence, RI, USA
| | - Daniel Schreck
- Department of Neuroscience, Brown University, Providence, RI, USA
| | - David M Berson
- Department of Neuroscience, Brown University, Providence, RI, USA.
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Gorin AS, Miao Y, Ahn S, Suresh V, Su Y, Ciftcioglu UM, Sommer FT, Hirsch JA. Local interneurons in the murine visual thalamus have diverse receptive fields and can provide feature selective inhibition to relay cells. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2023:2023.08.10.549394. [PMID: 37609295 PMCID: PMC10441385 DOI: 10.1101/2023.08.10.549394] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 08/24/2023]
Abstract
By influencing the type and quality of information that relay cells transmit, local interneurons in thalamus have a powerful impact on cortex. To define the sensory features that these inhibitory neurons encode, we mapped receptive fields of optogenetically identified cells in the murine dorsolateral geniculate nucleus. Although few in number, local interneurons had diverse types of receptive fields, like their counterpart relay cells. This result differs markedly from visual cortex, where inhibitory cells are typically less selective than excitatory cells. To explore how thalamic interneurons might converge on relay cells, we took a computational approach. Using an evolutionary algorithm to search through a library of interneuron models generated from our results, we show that aggregated output from different groups of local interneurons can simulate the inhibitory component of the relay cell's receptive field. Thus, our work provides proof-of-concept that groups of diverse interneurons can supply feature-specific inhibition to relay cells.
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14
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Krüppel S, Khani MH, Karamanlis D, Erol YC, Zapp SJ, Mietsch M, Protti DA, Rozenblit F, Gollisch T. Diversity of Ganglion Cell Responses to Saccade-Like Image Shifts in the Primate Retina. J Neurosci 2023; 43:5319-5339. [PMID: 37339877 PMCID: PMC10359029 DOI: 10.1523/jneurosci.1561-22.2023] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/16/2022] [Revised: 04/12/2023] [Accepted: 05/08/2023] [Indexed: 06/22/2023] Open
Abstract
Saccades are a fundamental part of natural vision. They interrupt fixations of the visual gaze and rapidly shift the image that falls onto the retina. These stimulus dynamics can cause activation or suppression of different retinal ganglion cells, but how they affect the encoding of visual information in different types of ganglion cells is largely unknown. Here, we recorded spiking responses to saccade-like shifts of luminance gratings from ganglion cells in isolated marmoset retinas and investigated how the activity depended on the combination of presaccadic and postsaccadic images. All identified cell types, On and Off parasol and midget cells, as well as a type of Large Off cells, displayed distinct response patterns, including particular sensitivity to either the presaccadic or the postsaccadic image or combinations thereof. In addition, Off parasol and Large Off cells, but not On cells, showed pronounced sensitivity to whether the image changed across the transition. Stimulus sensitivity of On cells could be explained based on their responses to step changes in light intensity, whereas Off cells, in particular, parasol and the Large Off cells, seem to be affected by additional interactions that are not triggered during simple light-intensity flashes. Together, our data show that ganglion cells in the primate retina are sensitive to different combinations of presaccadic and postsaccadic visual stimuli. This contributes to the functional diversity of the output signals of the retina and to asymmetries between On and Off pathways and provides evidence of signal processing beyond what is triggered by isolated steps in light intensity.SIGNIFICANCE STATEMENT Sudden eye movements (saccades) shift our direction of gaze, bringing new images in focus on our retinas. To study how retinal neurons deal with these rapid image transitions, we recorded spiking activity from ganglion cells, the output neurons of the retina, in isolated retinas of marmoset monkeys while shifting a projected image in a saccade-like fashion across the retina. We found that the cells do not just respond to the newly fixated image, but that different types of ganglion cells display different sensitivities to the presaccadic and postsaccadic stimulus patterns. Certain Off cells, for example, are sensitive to changes in the image across transitions, which contributes to differences between On and Off information channels and extends the range of encoded stimulus features.
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Affiliation(s)
- Steffen Krüppel
- Department of Ophthalmology, University Medical Center Göttingen, 37075 Göttingen, Germany
- Bernstein Center for Computational Neuroscience Göttingen, 37073 Göttingen, Germany
- Cluster of Excellence "Multiscale Bioimaging: from Molecular Machines to Networks of Excitable Cells" (MBExC), University of Göttingen, 37075 Göttingen, Germany
| | - Mohammad H Khani
- Department of Ophthalmology, University Medical Center Göttingen, 37075 Göttingen, Germany
- Bernstein Center for Computational Neuroscience Göttingen, 37073 Göttingen, Germany
- International Max Planck Research School for Neurosciences, 37077 Göttingen, Germany
| | - Dimokratis Karamanlis
- Department of Ophthalmology, University Medical Center Göttingen, 37075 Göttingen, Germany
- Bernstein Center for Computational Neuroscience Göttingen, 37073 Göttingen, Germany
- International Max Planck Research School for Neurosciences, 37077 Göttingen, Germany
| | - Yunus C Erol
- Department of Ophthalmology, University Medical Center Göttingen, 37075 Göttingen, Germany
- Bernstein Center for Computational Neuroscience Göttingen, 37073 Göttingen, Germany
- International Max Planck Research School for Neurosciences, 37077 Göttingen, Germany
| | - Sören J Zapp
- Department of Ophthalmology, University Medical Center Göttingen, 37075 Göttingen, Germany
- Bernstein Center for Computational Neuroscience Göttingen, 37073 Göttingen, Germany
| | - Matthias Mietsch
- Laboratory Animal Science Unit, German Primate Center, 37077 Göttingen, Germany
- German Center for Cardiovascular Research, 37075 Göttingen, Germany
| | - Dario A Protti
- School of Medical Sciences (Neuroscience), The University of Sydney, Sydney 2006, New South Wales, Australia
| | - Fernando Rozenblit
- Department of Ophthalmology, University Medical Center Göttingen, 37075 Göttingen, Germany
- Bernstein Center for Computational Neuroscience Göttingen, 37073 Göttingen, Germany
| | - Tim Gollisch
- Department of Ophthalmology, University Medical Center Göttingen, 37075 Göttingen, Germany
- Bernstein Center for Computational Neuroscience Göttingen, 37073 Göttingen, Germany
- Cluster of Excellence "Multiscale Bioimaging: from Molecular Machines to Networks of Excitable Cells" (MBExC), University of Göttingen, 37075 Göttingen, Germany
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15
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Wagner S, Strasser T. Impact of text contrast polarity on the retinal activity in myopes and emmetropes using modified pattern ERG. Sci Rep 2023; 13:11101. [PMID: 37423936 DOI: 10.1038/s41598-023-38192-9] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/07/2023] [Accepted: 07/05/2023] [Indexed: 07/11/2023] Open
Abstract
Environmental factors favoring myopia development are still being studied and there is accumulating evidence for a significant role of nearwork. Recently, reading standard black-on-white text was found to activate the retinal OFF pathway and induce choroidal thinning, which is associated with myopia onset. Contrarily, reading white-on-black text led to thicker choroids, being protective against myopia. Respective effects on retinal processing are yet unknown. Here, we exploratively assessed the impact of contrast polarity on the retinal activity and possible interactions with eccentricity and refractive error. We recorded pattern electroretinograms in myopic and emmetropic adults while presenting a dead leaves stimulus (DLS), overlaid by masks of different size in ring or circle shape, either filled with uniform gray or text of inverted or standard contrast. In myopes, retinal responses for DLS with standard and inverted contrast were larger when the perifovea was stimulated (6-12 deg), however, including the fovea resulted in smaller amplitudes for inverted contrast than in emmetropes. The retina of emmetropes was more sensitive to inverted contrast than to standard and gray within 12 deg, but most sensitive for gray in the perifovea. This demonstrates that the refractive error influences the sensitivity to text contrast polarity, with a special role of the peripheral retina, which is in line with previous studies about blur sensitivity. Defining whether the differences derive from retinal processing or anatomical features of a myopic eye requires further investigation. Our approach might be a first step to explain how nearwork promotes the eye's elongation.
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Affiliation(s)
- Sandra Wagner
- Institute for Ophthalmic Research, University of Tuebingen, Elfriede-Aulhorn-Str. 7, 72076, Tuebingen, Germany.
| | - Torsten Strasser
- Institute for Ophthalmic Research, University of Tuebingen, Elfriede-Aulhorn-Str. 7, 72076, Tuebingen, Germany
- University Eye Hospital Tuebingen, Elfriede-Aulhorn-Str. 7, 72076, Tuebingen, Germany
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16
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Ketkar MD, Shao S, Gjorgjieva J, Silies M. Multifaceted luminance gain control beyond photoreceptors in Drosophila. Curr Biol 2023:S0960-9822(23)00619-X. [PMID: 37285845 DOI: 10.1016/j.cub.2023.05.024] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/03/2023] [Revised: 05/10/2023] [Accepted: 05/11/2023] [Indexed: 06/09/2023]
Abstract
Animals navigating in natural environments must handle vast changes in their sensory input. Visual systems, for example, handle changes in luminance at many timescales, from slow changes across the day to rapid changes during active behavior. To maintain luminance-invariant perception, visual systems must adapt their sensitivity to changing luminance at different timescales. We demonstrate that luminance gain control in photoreceptors alone is insufficient to explain luminance invariance at both fast and slow timescales and reveal the algorithms that adjust gain past photoreceptors in the fly eye. We combined imaging and behavioral experiments with computational modeling to show that downstream of photoreceptors, circuitry taking input from the single luminance-sensitive neuron type L3 implements gain control at fast and slow timescales. This computation is bidirectional in that it prevents the underestimation of contrasts in low luminance and overestimation in high luminance. An algorithmic model disentangles these multifaceted contributions and shows that the bidirectional gain control occurs at both timescales. The model implements a nonlinear interaction of luminance and contrast to achieve gain correction at fast timescales and a dark-sensitive channel to improve the detection of dim stimuli at slow timescales. Together, our work demonstrates how a single neuronal channel performs diverse computations to implement gain control at multiple timescales that are together important for navigation in natural environments.
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Affiliation(s)
- Madhura D Ketkar
- Institute of Developmental and Neurobiology, Johannes-Gutenberg University Mainz, Hanns-Dieter-Hüsch-Weg 15, 55128 Mainz, Germany
| | - Shuai Shao
- Max Planck Institute for Brain Research, Max-von-Laue-Straße 4, 60438 Frankfurt am Main, Germany; Department of Neurophysiology, Radboud University, Heyendaalseweg 135, 6525 EN Nijmegen, the Netherlands
| | - Julijana Gjorgjieva
- Max Planck Institute for Brain Research, Max-von-Laue-Straße 4, 60438 Frankfurt am Main, Germany; School of Life Sciences, Technical University Munich, Maximus-von-Imhof-Forum 3, 85354 Freising, Germany.
| | - Marion Silies
- Institute of Developmental and Neurobiology, Johannes-Gutenberg University Mainz, Hanns-Dieter-Hüsch-Weg 15, 55128 Mainz, Germany.
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17
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Bhoi JD, Goel M, Ribelayga CP, Mangel SC. Circadian clock organization in the retina: From clock components to rod and cone pathways and visual function. Prog Retin Eye Res 2023; 94:101119. [PMID: 36503722 PMCID: PMC10164718 DOI: 10.1016/j.preteyeres.2022.101119] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/31/2020] [Revised: 08/22/2022] [Accepted: 08/25/2022] [Indexed: 12/13/2022]
Abstract
Circadian (24-h) clocks are cell-autonomous biological oscillators that orchestrate many aspects of our physiology on a daily basis. Numerous circadian rhythms in mammalian and non-mammalian retinas have been observed and the presence of an endogenous circadian clock has been demonstrated. However, how the clock and associated rhythms assemble into pathways that support and control retina function remains largely unknown. Our goal here is to review the current status of our knowledge and evaluate recent advances. We describe many previously-observed retinal rhythms, including circadian rhythms of morphology, biochemistry, physiology, and gene expression. We evaluate evidence concerning the location and molecular machinery of the retinal circadian clock, as well as consider findings that suggest the presence of multiple clocks. Our primary focus though is to describe in depth circadian rhythms in the light responses of retinal neurons with an emphasis on clock control of rod and cone pathways. We examine evidence that specific biochemical mechanisms produce these daily light response changes. We also discuss evidence for the presence of multiple circadian retinal pathways involving rhythms in neurotransmitter activity, transmitter receptors, metabolism, and pH. We focus on distinct actions of two dopamine receptor systems in the outer retina, a dopamine D4 receptor system that mediates circadian control of rod/cone gap junction coupling and a dopamine D1 receptor system that mediates non-circadian, light/dark adaptive regulation of gap junction coupling between horizontal cells. Finally, we evaluate the role of circadian rhythmicity in retinal degeneration and suggest future directions for the field of retinal circadian biology.
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Affiliation(s)
- Jacob D Bhoi
- Ruiz Department of Ophthalmology and Visual Science, McGovern Medical School, UTHEALTH-The University of Texas Health Science Center at Houston, Houston, TX, USA; Neuroscience Honors Research Program, William Marsh Rice University, Houston, TX, USA
| | - Manvi Goel
- Department of Neuroscience, Wexner Medical Center, College of Medicine, The Ohio State University, Columbus, OH, USA
| | - Christophe P Ribelayga
- Ruiz Department of Ophthalmology and Visual Science, McGovern Medical School, UTHEALTH-The University of Texas Health Science Center at Houston, Houston, TX, USA; Neuroscience Honors Research Program, William Marsh Rice University, Houston, TX, USA.
| | - Stuart C Mangel
- Department of Neuroscience, Wexner Medical Center, College of Medicine, The Ohio State University, Columbus, OH, USA.
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18
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Wang C, Fang C, Zou Y, Yang J, Sawan M. Artificial intelligence techniques for retinal prostheses: a comprehensive review and future direction. J Neural Eng 2023; 20. [PMID: 36634357 DOI: 10.1088/1741-2552/acb295] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/20/2022] [Accepted: 01/12/2023] [Indexed: 01/14/2023]
Abstract
Objective. Retinal prostheses are promising devices to restore vision for patients with severe age-related macular degeneration or retinitis pigmentosa disease. The visual processing mechanism embodied in retinal prostheses play an important role in the restoration effect. Its performance depends on our understanding of the retina's working mechanism and the evolvement of computer vision models. Recently, remarkable progress has been made in the field of processing algorithm for retinal prostheses where the new discovery of the retina's working principle and state-of-the-arts computer vision models are combined together.Approach. We investigated the related research on artificial intelligence techniques for retinal prostheses. The processing algorithm in these studies could be attributed to three types: computer vision-related methods, biophysical models, and deep learning models.Main results. In this review, we first illustrate the structure and function of the normal and degenerated retina, then demonstrate the vision rehabilitation mechanism of three representative retinal prostheses. It is necessary to summarize the computational frameworks abstracted from the normal retina. In addition, the development and feature of three types of different processing algorithms are summarized. Finally, we analyze the bottleneck in existing algorithms and propose our prospect about the future directions to improve the restoration effect.Significance. This review systematically summarizes existing processing models for predicting the response of the retina to external stimuli. What's more, the suggestions for future direction may inspire researchers in this field to design better algorithms for retinal prostheses.
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Affiliation(s)
- Chuanqing Wang
- Center of Excellence in Biomedical Research on Advanced Integrated-on-chips Neurotechnologies, School of Engineering, Westlake University, Hangzhou 310030, People's Republic of China
| | - Chaoming Fang
- Center of Excellence in Biomedical Research on Advanced Integrated-on-chips Neurotechnologies, School of Engineering, Westlake University, Hangzhou 310030, People's Republic of China
| | - Yong Zou
- Beijing Institute of Radiation Medicine, Beijing, People's Republic of China
| | - Jie Yang
- Center of Excellence in Biomedical Research on Advanced Integrated-on-chips Neurotechnologies, School of Engineering, Westlake University, Hangzhou 310030, People's Republic of China
| | - Mohamad Sawan
- Center of Excellence in Biomedical Research on Advanced Integrated-on-chips Neurotechnologies, School of Engineering, Westlake University, Hangzhou 310030, People's Republic of China
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19
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Mesoscopic Mapping of Visual Pathway in a Female 5XFAD Mouse Model of Alzheimer's Disease. Cells 2022; 11:cells11233901. [PMID: 36497159 PMCID: PMC9740259 DOI: 10.3390/cells11233901] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/22/2022] [Revised: 11/25/2022] [Accepted: 12/01/2022] [Indexed: 12/11/2022] Open
Abstract
Amyloid-β (Aβ) deposition and Aβ-induced neurodegeneration appear in the retina and retinorecipient areas in the early stages of Alzheimer's disease (AD). Although these Aβ-related changes in the retina cause damage to the visual functions, no studies have yet revealed the alterations in the visual pathways of AD. Therefore, we investigated the alterations of visual circuits in the AD mouse model using anterograde tracer cholera toxin β subunits (CTβ). Moreover, we investigated the Aβ accumulation in the retina and retinorecipient areas and the neuronal loss, and synaptic degeneration in retinorecipient areas by immunofluorescent staining of 4- and 12-month-old female 5XFAD transgenic mice. Our results demonstrated that Aβ accumulation and neurodegeneration occurred in the retina and retinorecipient regions of early and late stages of the 5XFAD mice. Retinal efferents to the suprachiasmatic nucleus and lateral geniculate nucleus were impaired in the early stage of AD. Moreover, retinal connections to the dorsal lateral geniculate nucleus and superior colliculus were degenerated in the late-stage of AD. These findings reveal the Aβ-related pathology induced visual circuit disturbances at the mesoscale level in both the early and late stages of AD and provide anatomical and functional insights into the visual circuitry of AD.
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20
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Li L, Feng X, Fang F, Miller DA, Zhang S, Zhuang P, Huang H, Liu P, Liu J, Sredar N, Liu L, Sun Y, Duan X, Goldberg JL, Zhang HF, Hu Y. Longitudinal in vivo Ca 2+ imaging reveals dynamic activity changes of diseased retinal ganglion cells at the single-cell level. Proc Natl Acad Sci U S A 2022; 119:e2206829119. [PMID: 36409915 PMCID: PMC9889883 DOI: 10.1073/pnas.2206829119] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/19/2022] [Accepted: 10/05/2022] [Indexed: 11/22/2022] Open
Abstract
Retinal ganglion cells (RGCs) are heterogeneous projection neurons that convey distinct visual features from the retina to brain. Here, we present a high-throughput in vivo RGC activity assay in response to light stimulation using noninvasive Ca2+ imaging of thousands of RGCs simultaneously in living mice. Population and single-cell analyses of longitudinal RGC Ca2+ imaging reveal distinct functional responses of RGCs and unprecedented individual RGC activity conversions during traumatic and glaucomatous degeneration. This study establishes a foundation for future in vivo RGC function classifications and longitudinal activity evaluations using more advanced imaging techniques and visual stimuli under normal, disease, and neural repair conditions. These analyses can be performed at both the population and single-cell levels using temporal and spatial information, which will be invaluable for understanding RGC pathophysiology and identifying functional biomarkers for diverse optic neuropathies.
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Affiliation(s)
- Liang Li
- Spencer Center for Vision Research, Department of Ophthalmology, Byers Eye Institute at Stanford University School of Medicine, Palo Alto, CA94304
| | - Xue Feng
- Spencer Center for Vision Research, Department of Ophthalmology, Byers Eye Institute at Stanford University School of Medicine, Palo Alto, CA94304
| | - Fang Fang
- Spencer Center for Vision Research, Department of Ophthalmology, Byers Eye Institute at Stanford University School of Medicine, Palo Alto, CA94304
- Department of Ophthalmology, The Second Xiangya Hospital, Central South University, Changsha410011, China
| | - David A. Miller
- Department of Biomedical Engineering, Northwestern University, Evanston, IL60208
| | - Shaobo Zhang
- Department of Ophthalmology, University of California San Francisco, San Francisco, CA94143
| | - Pei Zhuang
- Spencer Center for Vision Research, Department of Ophthalmology, Byers Eye Institute at Stanford University School of Medicine, Palo Alto, CA94304
| | - Haoliang Huang
- Spencer Center for Vision Research, Department of Ophthalmology, Byers Eye Institute at Stanford University School of Medicine, Palo Alto, CA94304
| | - Pingting Liu
- Spencer Center for Vision Research, Department of Ophthalmology, Byers Eye Institute at Stanford University School of Medicine, Palo Alto, CA94304
| | - Junting Liu
- Spencer Center for Vision Research, Department of Ophthalmology, Byers Eye Institute at Stanford University School of Medicine, Palo Alto, CA94304
| | - Nripun Sredar
- Spencer Center for Vision Research, Department of Ophthalmology, Byers Eye Institute at Stanford University School of Medicine, Palo Alto, CA94304
| | - Liang Liu
- Spencer Center for Vision Research, Department of Ophthalmology, Byers Eye Institute at Stanford University School of Medicine, Palo Alto, CA94304
| | - Yang Sun
- Spencer Center for Vision Research, Department of Ophthalmology, Byers Eye Institute at Stanford University School of Medicine, Palo Alto, CA94304
| | - Xin Duan
- Department of Ophthalmology, University of California San Francisco, San Francisco, CA94143
| | - Jeffrey L. Goldberg
- Spencer Center for Vision Research, Department of Ophthalmology, Byers Eye Institute at Stanford University School of Medicine, Palo Alto, CA94304
| | - Hao F. Zhang
- Department of Biomedical Engineering, Northwestern University, Evanston, IL60208
| | - Yang Hu
- Spencer Center for Vision Research, Department of Ophthalmology, Byers Eye Institute at Stanford University School of Medicine, Palo Alto, CA94304
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21
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Stöckl AL, Foster JJ. Night skies through animals' eyes-Quantifying night-time visual scenes and light pollution as viewed by animals. Front Cell Neurosci 2022; 16:984282. [PMID: 36274987 PMCID: PMC9582234 DOI: 10.3389/fncel.2022.984282] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/01/2022] [Accepted: 09/09/2022] [Indexed: 11/13/2022] Open
Abstract
A large proportion of animal species enjoy the benefits of being active at night, and have evolved the corresponding optical and neural adaptations to cope with the challenges of low light intensities. However, over the past century electric lighting has introduced direct and indirect light pollution into the full range of terrestrial habitats, changing nocturnal animals' visual worlds dramatically. To understand how these changes affect nocturnal behavior, we here propose an animal-centered analysis method based on environmental imaging. This approach incorporates the sensitivity and acuity limits of individual species, arriving at predictions of photon catch relative to noise thresholds, contrast distributions, and the orientation cues nocturnal species can extract from visual scenes. This analysis relies on just a limited number of visual system parameters known for each species. By accounting for light-adaptation in our analysis, we are able to make more realistic predictions of the information animals can extract from nocturnal visual scenes under different levels of light pollution. With this analysis method, we aim to provide context for the interpretation of behavioral findings, and to allow researchers to generate specific hypotheses for the behavior of nocturnal animals in observed light-polluted scenes.
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Affiliation(s)
- Anna Lisa Stöckl
- Department of Biology, University of Konstanz, Konstanz, Germany
- Centre for the Advanced Study of Collective Behaviour, University of Konstanz, Konstanz, Germany
- Zukunftskolleg, Universität Konstanz, Konstanz, Germany
| | - James Jonathan Foster
- Department of Biology, University of Konstanz, Konstanz, Germany
- Centre for the Advanced Study of Collective Behaviour, University of Konstanz, Konstanz, Germany
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22
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Strauss S, Korympidou MM, Ran Y, Franke K, Schubert T, Baden T, Berens P, Euler T, Vlasits AL. Center-surround interactions underlie bipolar cell motion sensitivity in the mouse retina. Nat Commun 2022; 13:5574. [PMID: 36163124 PMCID: PMC9513071 DOI: 10.1038/s41467-022-32762-7] [Citation(s) in RCA: 19] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2021] [Accepted: 08/16/2022] [Indexed: 11/09/2022] Open
Abstract
Motion sensing is a critical aspect of vision. We studied the representation of motion in mouse retinal bipolar cells and found that some bipolar cells are radially direction selective, preferring the origin of small object motion trajectories. Using a glutamate sensor, we directly observed bipolar cells synaptic output and found that there are radial direction selective and non-selective bipolar cell types, the majority being selective, and that radial direction selectivity relies on properties of the center-surround receptive field. We used these bipolar cell receptive fields along with connectomics to design biophysical models of downstream cells. The models and additional experiments demonstrated that bipolar cells pass radial direction selective excitation to starburst amacrine cells, which contributes to their directional tuning. As bipolar cells provide excitation to most amacrine and ganglion cells, their radial direction selectivity may contribute to motion processing throughout the visual system.
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Affiliation(s)
- Sarah Strauss
- Institute for Ophthalmic Research, University of Tübingen, Tübingen, Germany
- Centre for Integrative Neuroscience, University of Tübingen, Tübingen, Germany
- Tübingen AI Center, University of Tübingen, Tübingen, Germany
| | - Maria M Korympidou
- Institute for Ophthalmic Research, University of Tübingen, Tübingen, Germany
- Centre for Integrative Neuroscience, University of Tübingen, Tübingen, Germany
| | - Yanli Ran
- Institute for Ophthalmic Research, University of Tübingen, Tübingen, Germany
- Centre for Integrative Neuroscience, University of Tübingen, Tübingen, Germany
| | - Katrin Franke
- Institute for Ophthalmic Research, University of Tübingen, Tübingen, Germany
- Centre for Integrative Neuroscience, University of Tübingen, Tübingen, Germany
| | - Timm Schubert
- Institute for Ophthalmic Research, University of Tübingen, Tübingen, Germany
- Centre for Integrative Neuroscience, University of Tübingen, Tübingen, Germany
| | - Tom Baden
- Institute for Ophthalmic Research, University of Tübingen, Tübingen, Germany
- School of Life Sciences, University of Sussex, Brighton, UK
| | - Philipp Berens
- Institute for Ophthalmic Research, University of Tübingen, Tübingen, Germany
- Centre for Integrative Neuroscience, University of Tübingen, Tübingen, Germany
- Tübingen AI Center, University of Tübingen, Tübingen, Germany
| | - Thomas Euler
- Institute for Ophthalmic Research, University of Tübingen, Tübingen, Germany.
- Centre for Integrative Neuroscience, University of Tübingen, Tübingen, Germany.
| | - Anna L Vlasits
- Institute for Ophthalmic Research, University of Tübingen, Tübingen, Germany.
- Centre for Integrative Neuroscience, University of Tübingen, Tübingen, Germany.
- Department of Neurobiology, Northwestern University, Evanston, IL, USA.
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23
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Wendt G, Faul F. A simple model of binocular luster. J Vis 2022; 22:6. [PMID: 36074478 PMCID: PMC9469037 DOI: 10.1167/jov.22.10.6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022] Open
Abstract
The dichoptic combination of simple center–surround stimuli showing a contrast difference between eyes can trigger a lustrous impression in the fused percept, particularly when the contrast polarities in the two input images are of opposite sign. Recent developments suggest that the phenomenon of binocular luster results from a neural conflict between ON and OFF visual pathways at an early binocular level. Support for this idea was found in a previous study in which the empirical luster judgments strongly correlated with the predictions of an interocular conflict model which was based on such ON–OFF pairings. However, our original model could not account for the fact that weaker lustrous sensations can also be evoked by stimuli showing contrast polarities of same sign between eyes. In the present study we present an improved model that also includes ON–ON and OFF–OFF pairings. The predictive power of this model was tested in a series of four experiments, using a total of about 500 different center–ring–surround configurations as test stimuli. We found that, overall, our modified version accounts for more than 80% of the variance in the empirical luster judgments and that the former problems could be largely resolved. Our results further suggest a nonlinear transducer function for the binocular conflict signals.
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Affiliation(s)
- Gunnar Wendt
- Institut für Psychologie, Universität Kiel, Kiel, Germany.,
| | - Franz Faul
- Institut für Psychologie, Universität Kiel, Kiel, Germany.,
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24
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Goetz J, Jessen ZF, Jacobi A, Mani A, Cooler S, Greer D, Kadri S, Segal J, Shekhar K, Sanes JR, Schwartz GW. Unified classification of mouse retinal ganglion cells using function, morphology, and gene expression. Cell Rep 2022; 40:111040. [PMID: 35830791 PMCID: PMC9364428 DOI: 10.1016/j.celrep.2022.111040] [Citation(s) in RCA: 81] [Impact Index Per Article: 27.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/10/2021] [Revised: 01/27/2022] [Accepted: 06/13/2022] [Indexed: 11/24/2022] Open
Abstract
Classification and characterization of neuronal types are critical for understanding their function and dysfunction. Neuronal classification schemes typically rely on measurements of electrophysiological, morphological, and molecular features, but aligning such datasets has been challenging. Here, we present a unified classification of mouse retinal ganglion cells (RGCs), the sole retinal output neurons. We use visually evoked responses to classify 1,859 mouse RGCs into 42 types. We also obtain morphological or transcriptomic data from subsets and use these measurements to align the functional classification to publicly available morphological and transcriptomic datasets. We create an online database that allows users to browse or download the data and to classify RGCs from their light responses using a machine learning algorithm. This work provides a resource for studies of RGCs, their upstream circuits in the retina, and their projections in the brain, and establishes a framework for future efforts in neuronal classification and open data distribution.
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Affiliation(s)
- Jillian Goetz
- Department of Ophthalmology, Feinberg School of Medicine, Northwestern University, Chicago, IL, USA
| | - Zachary F Jessen
- Department of Ophthalmology, Feinberg School of Medicine, Northwestern University, Chicago, IL, USA; Northwestern University Interdepartmental Neuroscience Program, Northwestern University, Evanston, IL, USA; Medical Scientist Training Program, Northwestern University, Chicago, IL, USA
| | - Anne Jacobi
- F.M. Kirby Neurobiology Center, Department of Neurology, Boston Children's Hospital, Harvard Medical School, Boston, MA 02115, USA; Center for Brain Science and Department of Molecular and Cellular Biology, Harvard University, Cambridge, MA, USA
| | - Adam Mani
- Department of Ophthalmology, Feinberg School of Medicine, Northwestern University, Chicago, IL, USA
| | - Sam Cooler
- Northwestern University Interdepartmental Neuroscience Program, Northwestern University, Evanston, IL, USA
| | - Devon Greer
- Department of Ophthalmology, Feinberg School of Medicine, Northwestern University, Chicago, IL, USA; Northwestern University Interdepartmental Neuroscience Program, Northwestern University, Evanston, IL, USA
| | - Sabah Kadri
- Department of Pathology, Pritzker School of Medicine, University of Chicago, Chicago, IL, USA
| | - Jeremy Segal
- Department of Pathology, Pritzker School of Medicine, University of Chicago, Chicago, IL, USA
| | - Karthik Shekhar
- Department of Chemical and Biomolecular Engineering and Helen Wills Neuroscience Institute, University of California Berkeley, Berkeley, CA, USA
| | - Joshua R Sanes
- Center for Brain Science and Department of Molecular and Cellular Biology, Harvard University, Cambridge, MA, USA
| | - Gregory W Schwartz
- Department of Ophthalmology, Feinberg School of Medicine, Northwestern University, Chicago, IL, USA; Department of Physiology, Feinberg School of Medicine, Northwestern University, Chicago, IL, USA; Department of Neurobiology, Weinberg College of Arts and Sciences, Northwestern University, Evanston, IL, USA.
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25
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Wienbar S, Schwartz GW. Differences in spike generation instead of synaptic inputs determine the feature selectivity of two retinal cell types. Neuron 2022; 110:2110-2123.e4. [PMID: 35508174 PMCID: PMC9262831 DOI: 10.1016/j.neuron.2022.04.012] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/20/2021] [Revised: 03/21/2022] [Accepted: 04/11/2022] [Indexed: 12/19/2022]
Abstract
Retinal ganglion cells (RGCs) are the spiking projection neurons of the eye that encode different features of the visual environment. The circuits providing synaptic input to different RGC types to drive feature selectivity have been studied extensively, but there has been less research aimed at understanding the intrinsic properties and how they impact feature selectivity. We introduce an RGC type in the mouse, the Bursty Suppressed-by-Contrast (bSbC) RGC, and compared it to the OFF sustained alpha (OFFsA). Differences in their contrast response functions arose from differences not in synaptic inputs but in their intrinsic properties. Spike generation was the key intrinsic property behind this functional difference; the bSbC RGC undergoes depolarization block while the OFFsA RGC maintains a high spike rate. Our results demonstrate that differences in intrinsic properties allow these two RGC types to detect and relay distinct features of an identical visual stimulus to the brain.
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Affiliation(s)
- Sophia Wienbar
- Department of Ophthalmology, Feinberg School of Medicine, Northwestern University, Chicago, IL 60611, USA; Northwestern University Interdepartmental Neuroscience Program, Northwestern University, Evanston, IL 60208, USA
| | - Gregory William Schwartz
- Department of Ophthalmology, Feinberg School of Medicine, Northwestern University, Chicago, IL 60611, USA; Department of Neuroscience, Feinberg School of Medicine, Northwestern University, Chicago, IL 60611, USA; Department of Neurobiology, Weinberg College of Arts and Sciences, Northwestern University, Evanston, IL 60208, USA.
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26
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Liu JK, Karamanlis D, Gollisch T. Simple model for encoding natural images by retinal ganglion cells with nonlinear spatial integration. PLoS Comput Biol 2022; 18:e1009925. [PMID: 35259159 PMCID: PMC8932571 DOI: 10.1371/journal.pcbi.1009925] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/02/2021] [Revised: 03/18/2022] [Accepted: 02/14/2022] [Indexed: 01/05/2023] Open
Abstract
A central goal in sensory neuroscience is to understand the neuronal signal processing involved in the encoding of natural stimuli. A critical step towards this goal is the development of successful computational encoding models. For ganglion cells in the vertebrate retina, the development of satisfactory models for responses to natural visual scenes is an ongoing challenge. Standard models typically apply linear integration of visual stimuli over space, yet many ganglion cells are known to show nonlinear spatial integration, in particular when stimulated with contrast-reversing gratings. We here study the influence of spatial nonlinearities in the encoding of natural images by ganglion cells, using multielectrode-array recordings from isolated salamander and mouse retinas. We assess how responses to natural images depend on first- and second-order statistics of spatial patterns inside the receptive field. This leads us to a simple extension of current standard ganglion cell models. We show that taking not only the weighted average of light intensity inside the receptive field into account but also its variance over space can partly account for nonlinear integration and substantially improve response predictions of responses to novel images. For salamander ganglion cells, we find that response predictions for cell classes with large receptive fields profit most from including spatial contrast information. Finally, we demonstrate how this model framework can be used to assess the spatial scale of nonlinear integration. Our results underscore that nonlinear spatial stimulus integration translates to stimulation with natural images. Furthermore, the introduced model framework provides a simple, yet powerful extension of standard models and may serve as a benchmark for the development of more detailed models of the nonlinear structure of receptive fields. For understanding how sensory systems operate in the natural environment, an important goal is to develop models that capture neuronal responses to natural stimuli. For retinal ganglion cells, which connect the eye to the brain, current standard models often fail to capture responses to natural visual scenes. This shortcoming is at least partly rooted in the fact that ganglion cells may combine visual signals over space in a nonlinear fashion. We here show that a simple model, which not only considers the average light intensity inside a cell’s receptive field but also the variance of light intensity over space, can partly account for these nonlinearities and thereby improve current standard models. This provides an easy-to-obtain benchmark for modeling ganglion cell responses to natural images.
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Affiliation(s)
- Jian K. Liu
- University Medical Center Göttingen, Department of Ophthalmology, Göttingen, Germany
- Bernstein Center for Computational Neuroscience Göttingen, Göttingen, Germany
- School of Computing, University of Leeds, Leeds, United Kingdom
| | - Dimokratis Karamanlis
- University Medical Center Göttingen, Department of Ophthalmology, Göttingen, Germany
- Bernstein Center for Computational Neuroscience Göttingen, Göttingen, Germany
- International Max Planck Research School for Neurosciences, Göttingen, Germany
| | - Tim Gollisch
- University Medical Center Göttingen, Department of Ophthalmology, Göttingen, Germany
- Bernstein Center for Computational Neuroscience Göttingen, Göttingen, Germany
- Cluster of Excellence “Multiscale Bioimaging: from Molecular Machines to Networks of Excitable Cells” (MBExC), University of Göttingen, Göttingen, Germany
- * E-mail:
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27
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Yang JW, Chen CY, Yu ZY, Chung JH, Liu X, Wu CY, Chen GY. An electroactive hybrid biointerface for enhancing neuronal differentiation and axonal outgrowth on bio-subretinal chip. Mater Today Bio 2022; 14:100253. [PMID: 35464741 PMCID: PMC9018446 DOI: 10.1016/j.mtbio.2022.100253] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/10/2022] [Revised: 03/14/2022] [Accepted: 03/31/2022] [Indexed: 12/20/2022] Open
Abstract
Retinal prostheses offer viable vision restoration therapy for patients with blindness. However, a critical requirement for maintaining the stable performance of electrical stimulation and signal transmission is the biocompatibility of the electrode interface. Here, we demonstrated a functionalized electrode-neuron biointerface composed of an annealed graphene oxide-collagen (aGO-COL) composite and neuronal cells. The aGO-COL exhibited an electroactive 3D crumpled surface structure and enhanced the differentiation efficiency of PC-12 cells. It is integrated into a photovoltaic self-powered retinal chip to develop a biohybrid retinal implant that facilitates biocompatibility and tissue regeneration. Moreover, aGO-COL micropatterns fabricated via 3D bioprinting can be used to create neuronal cell microarrays, which supports the possibility of retaining the high spatial resolution achieved through electrical stimulation of the retinal chip. This study paves the way for the next generation of biohybrid retinal implants based on biointerfaces.
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Affiliation(s)
- Jia-Wei Yang
- Institute of Biomedical Engineering, College of Electrical and Computer Engineering, National Yang Ming Chiao Tung University, Hsinchu, 300093, Taiwan
- Department of Electronics and Electrical Engineering, College of Electrical and Computer Engineering, National Yang Ming Chiao Tung University, Hsinchu, 300093, Taiwan
| | - Chong-You Chen
- Institute of Biomedical Engineering, College of Electrical and Computer Engineering, National Yang Ming Chiao Tung University, Hsinchu, 300093, Taiwan
- Department of Electronics and Electrical Engineering, College of Electrical and Computer Engineering, National Yang Ming Chiao Tung University, Hsinchu, 300093, Taiwan
| | - Zih-Yu Yu
- Institute of Biomedical Engineering, College of Electrical and Computer Engineering, National Yang Ming Chiao Tung University, Hsinchu, 300093, Taiwan
| | - Johnson H.Y. Chung
- ARC Centre of Excellence for Electromaterials Science, Intelligent Polymer Research Institute, University of Wollongong, Wollongong, NSW 2500, Australia
| | - Xiao Liu
- ARC Centre of Excellence for Electromaterials Science, Intelligent Polymer Research Institute, University of Wollongong, Wollongong, NSW 2500, Australia
| | - Chung-Yu Wu
- Institute of Electronics, National Yang Ming Chiao Tung University, Hsinchu, 300093, Taiwan
| | - Guan-Yu Chen
- Institute of Biomedical Engineering, College of Electrical and Computer Engineering, National Yang Ming Chiao Tung University, Hsinchu, 300093, Taiwan
- Department of Electronics and Electrical Engineering, College of Electrical and Computer Engineering, National Yang Ming Chiao Tung University, Hsinchu, 300093, Taiwan
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28
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Wendt G, Faul F. Binocular luster - A review. Vision Res 2022; 194:108008. [PMID: 35182893 DOI: 10.1016/j.visres.2022.108008] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/07/2021] [Revised: 12/20/2021] [Accepted: 12/29/2021] [Indexed: 11/30/2022]
Abstract
Binocular luster is a visual phenomenon that can be elicited by dichoptic stimuli showing an interocular difference in color or luminance contrast. For instance, when the two eyes are presented with simple center-surround stimuli in which the center patch in one eye is brighter and in the other eye darker than the common surround, the center patch in the fused percept assumes a lustrous appearance reminiscent of metal or graphite. Soon after the discovery of this phenomenon in the mid-19th century, it was intensively studied and several explanations were proposed. After this initial phase, however, research interest waned significantly. Stimulated by new insights into related phenomena and the underlying physiological mechanisms, the last 20 years have seen an increase in research activity in this field, which has considerably expanded our understanding of binocular luster. In this paper, we provide a detailed review of research on binocular luster over the past 170 years. We present and discuss the existing findings in a number of separate sections, dealing with 1) the phenomenology of binocular luster, 2) different theories that have been proposed, 3) several factors influencing the lustrous impression, 4) the relationship between binocular luster and binocular rivalry, 5) the current understanding of its neural basis, and 6) potential applications based on binocular luster.
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29
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Tesmer AL, Fields NP, Robles E. Input from torus longitudinalis drives binocularity and spatial summation in zebrafish optic tectum. BMC Biol 2022; 20:24. [PMID: 35073895 PMCID: PMC8788132 DOI: 10.1186/s12915-021-01222-x] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/02/2021] [Accepted: 12/23/2021] [Indexed: 11/29/2022] Open
Abstract
Background A continued effort in neuroscience aims to understand the way brain circuits consisting of diverse neuronal types generate complex behavior following sensory input. A common feature of vertebrate visual systems is that lower-order and higher-order visual areas are reciprocally connected. Feedforward projections confer visual responsiveness to higher-order visual neurons while feedback projections likely serve to modulate responses of lower-order visual neurons in a context-dependent manner. Optic tectum is the largest first-order visual brain area in zebrafish and is reciprocally connected with the torus longitudinalis (TL), a second-order visual brain area that does not receive retinal input. A functional role for feedback projections from TL to tectum has not been identified. Here we aim to understand how this feedback contributes to visual processing. Results In this study, we demonstrate that TL feedback projections to tectum drive binocular integration and spatial summation in a defined tectal circuit. We performed genetically targeted, cell type-specific functional imaging in tectal pyramidal neurons (PyrNs) and their two input neuron populations: retinal ganglion cells (RGCs) and neurons in TL. We find that PyrNs encode gradual changes in scene luminance using a complement of three distinct response classes that encode different light intensity ranges. Functional imaging of RGC inputs to tectum suggest that these response classes originate in the retina and RGC input specifies PyrN functional classes. In contrast, TL input serves to endow PyrNs with large, compound receptive fields that span both retinal hemifields. Conclusions These findings reveal a novel role for the zebrafish TL in driving binocular integration and spatial summation in tectal PyrNs. The neural circuit we describe generates a population of tectal neurons with large receptive fields tailored for detecting changes in the visual scene. Supplementary Information The online version contains supplementary material available at 10.1186/s12915-021-01222-x.
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30
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Ezra-Tsur E, Amsalem O, Ankri L, Patil P, Segev I, Rivlin-Etzion M. Realistic retinal modeling unravels the differential role of excitation and inhibition to starburst amacrine cells in direction selectivity. PLoS Comput Biol 2021; 17:e1009754. [PMID: 34968385 PMCID: PMC8754344 DOI: 10.1371/journal.pcbi.1009754] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2021] [Revised: 01/12/2022] [Accepted: 12/14/2021] [Indexed: 11/19/2022] Open
Abstract
Retinal direction-selectivity originates in starburst amacrine cells (SACs), which display a centrifugal preference, responding with greater depolarization to a stimulus expanding from soma to dendrites than to a collapsing stimulus. Various mechanisms were hypothesized to underlie SAC centrifugal preference, but dissociating them is experimentally challenging and the mechanisms remain debatable. To address this issue, we developed the Retinal Stimulation Modeling Environment (RSME), a multifaceted data-driven retinal model that encompasses detailed neuronal morphology and biophysical properties, retina-tailored connectivity scheme and visual input. Using a genetic algorithm, we demonstrated that spatiotemporally diverse excitatory inputs-sustained in the proximal and transient in the distal processes-are sufficient to generate experimentally validated centrifugal preference in a single SAC. Reversing these input kinetics did not produce any centrifugal-preferring SAC. We then explored the contribution of SAC-SAC inhibitory connections in establishing the centrifugal preference. SAC inhibitory network enhanced the centrifugal preference, but failed to generate it in its absence. Embedding a direction selective ganglion cell (DSGC) in a SAC network showed that the known SAC-DSGC asymmetric connectivity by itself produces direction selectivity. Still, this selectivity is sharpened in a centrifugal-preferring SAC network. Finally, we use RSME to demonstrate the contribution of SAC-SAC inhibitory connections in mediating direction selectivity and recapitulate recent experimental findings. Thus, using RSME, we obtained a mechanistic understanding of SACs' centrifugal preference and its contribution to direction selectivity.
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Affiliation(s)
- Elishai Ezra-Tsur
- Department of Brain Sciences, Weizmann Institute of Science, Rehovot, Israel
- Department of Mathematics and Computer Science, The Open University of Israel, Ra’anana, Israel
| | - Oren Amsalem
- Department of Neurobiology, Hebrew University of Jerusalem, Jerusalem, Israel
| | - Lea Ankri
- Department of Brain Sciences, Weizmann Institute of Science, Rehovot, Israel
| | - Pritish Patil
- Department of Brain Sciences, Weizmann Institute of Science, Rehovot, Israel
| | - Idan Segev
- Department of Neurobiology, Hebrew University of Jerusalem, Jerusalem, Israel
- Edmond and Lily Safra Center for Brain Sciences, Hebrew University of Jerusalem, Jerusalem, Israel
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31
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Flood MD, Eggers ED. Dopamine D1 and D4 receptors contribute to light adaptation in ON-sustained retinal ganglion cells. J Neurophysiol 2021; 126:2039-2052. [PMID: 34817291 PMCID: PMC8715048 DOI: 10.1152/jn.00218.2021] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/11/2021] [Revised: 11/08/2021] [Accepted: 11/19/2021] [Indexed: 01/21/2023] Open
Abstract
The adaptation of ganglion cells to increasing light levels is a crucial property of the retina. The retina must respond to light intensities that vary by 10-12 orders of magnitude, but the dynamic range of ganglion cell responses covers only ∼3 orders of magnitude. Dopamine is a crucial neuromodulator for light adaptation and activates receptors in the D1 and D2 families. Dopamine type D1 receptors (D1Rs) are expressed on horizontal cells and some bipolar, amacrine, and ganglion cells. In the D2 family, D2Rs are expressed on dopaminergic amacrine cells and D4Rs are primarily expressed on photoreceptors. However, the roles of activating these receptors to modulate the synaptic properties of the inputs to ganglion cells are not yet clear. Here, we used single-cell retinal patch-clamp recordings from the mouse retina to determine how activating D1Rs and D4Rs changed the light-evoked and spontaneous excitatory inputs to ON-sustained (ON-s) ganglion cells. We found that both D1R and D4R activation decrease the light-evoked excitatory inputs to ON-s ganglion cells, but that only the sum of the peak response decrease due to activating the two receptors was similar to the effect of light adaptation to a rod-saturating background. The largest effects on spontaneous excitatory activity of both D1R and D4R agonists was on the frequency of events, suggesting that both D1Rs and D4Rs are acting upstream of the ganglion cells.NEW & NOTEWORTHY Dopamine by bright light conditions allows retinal neurons to reduce sensitivity to adapt to bright light conditions. It is not clear how and why dopamine receptors modulate retinal ganglion cell signaling. We found that both D1 and D4 dopamine receptors in photoreceptors and inner retinal neurons contribute significantly to the reduction in sensitivity of ganglion cells with light adaptation. However, light adaptation also requires dopamine-independent mechanisms that could reflect inherent sensitivity changes in photoreceptors.
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Affiliation(s)
- Michael D Flood
- Department of Physiology, University of Arizona, Tucson, Arizona
- Department Biomedical Engineering, University of Arizona, Tucson, Arizona
| | - Erika D Eggers
- Department of Physiology, University of Arizona, Tucson, Arizona
- Department Biomedical Engineering, University of Arizona, Tucson, Arizona
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32
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Cao J, Mangel SC. Interactions of cone cannabinoid CB1 and dopamine D4 receptors increase day/night difference in rod-cone gap junction coupling in goldfish retina. J Physiol 2021; 599:4085-4100. [PMID: 34252195 DOI: 10.1113/jp281308] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/30/2020] [Accepted: 06/30/2021] [Indexed: 01/16/2023] Open
Abstract
KEY POINTS Although cone and rod photoreceptor cells in the retina have a type of cannabinoid receptor called a CB1 receptor, little is known about how cannabinoids, the active component in marijuana, affect retinal function. Studies have shown that a circadian (24-h) clock in the retina uses dopamine receptors, which are also on photoreceptors, to regulate gap junctions (a type of cell-to-cell communication) between rods and cones, so that they are functional (open) at night but closed in the day. We show that CB1 receptors have opposite effects on rod-cone gap junctions in day and night, decreasing communication in the day when dopamine receptors are active and increasing communication when dopamine receptors are inactive. CB1 and dopamine receptors thus work together to enhance the day/night difference in rod-cone gap junction communication. The increased rod-cone communication at night due to cannabinoid CB1 receptors may help improve night vision. ABSTRACT Cannabinoid CB1 receptors and dopamine D4 receptors in the brain form receptor complexes that interact but the physiological function of these interactions in intact tissue remains unclear. In vertebrate retina, rods and cones, which are connected by gap junctions, express both CB1 and D4 receptors. Because the retinal circadian clock uses cone D4 receptors to decrease rod-cone gap junction coupling in the day and to increase it at night, we studied whether an interaction between cone CB1 and D4 receptors increases the day/night difference in rod-cone coupling compared to D4 receptors acting alone. Using electrical recording and injections of Neurobiotin tracer into individual cones in intact goldfish retinas, we found that SR141716A (a CB1 receptor antagonist) application alone in the day increased both the extent of rod-cone tracer coupling and rod input to cones, which reaches cones via open gap junctions. Conversely, SR141716A application alone at night or SR141716A application in the day following 30-min spiperone (a D4 receptor antagonist) application decreased both rod-cone tracer coupling and rod input to cones. These results show that endogenous activation of cone CB1 receptors decreases rod-cone coupling in the day when D4 receptors are activated but increases it at night when D4 receptors are not activated. Therefore, the D4 receptor-dependent day/night switch in the effects of CB1 receptor activation results in an enhancement of the day/night difference in rod-cone coupling. This synergistic interaction increases detection of very dim large objects at night and fine spatial details in the day.
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Affiliation(s)
- Jiexin Cao
- Division of Pharmaceutics and Pharmacology, College of Pharmacy, Ohio State University, Columbus, OH, USA.,Department of Neuroscience, Ohio State University College of Medicine, Columbus, OH, USA
| | - Stuart C Mangel
- Division of Pharmaceutics and Pharmacology, College of Pharmacy, Ohio State University, Columbus, OH, USA.,Department of Neuroscience, Ohio State University College of Medicine, Columbus, OH, USA
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33
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Tao Y, Hu B, Ma Z, Li H, Du E, Wang G, Xing B, Ma J, Song Z. Intravitreous delivery of melatonin affects the retinal neuron survival and visual signal transmission: in vivo and ex vivo study. Drug Deliv 2021; 27:1386-1396. [PMID: 33016801 PMCID: PMC7580852 DOI: 10.1080/10717544.2020.1818882] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023] Open
Abstract
Intravitreal delivery can maximize the intensity of therapeutic agents and extend their residence time within ocular tissue. Melatonin is a lipophilic molecule that crosses freely biological barriers and cell membranes. This study intends to investigate the effects of intravitreally delivered melatonin on mouse retina. The visual function of administered mice is assessed by electrophysiological and behavior examinations three weeks after intravitreal delivery. Moreover, multi-electrode array (MEA) was used to assess the electrical activities of retinal ganglion cells (RGCs). We found that intravitreal delivery of high dosage melatonin (400-500 µg/kg) destroyed the retinal architecture and impaired the visual function of mice. Conversely, the melatonin administration at low dose (100-300 µg/kg) did not have any significant effects on the photoreceptor survival or visual function. As shown in the MEA recording, the photoreceptors activity of the central region was more severely disturbed by the high dose melatonin. A pronounced augment of the spontaneous firing frequency was recorded in these mice received high dosage melatonin, indicating that intravitreal delivery of high dosage melatonin would affect the electrical activity of RGCs. Immunostaining assay showed that the vitality of cone photoreceptor was impaired by high dose melatonin. These findings suggest that intravitreal melatonin is not always beneficial for ocular tissues, especially when it is administered at high dosage. These data add new perspectives to current knowledge about melatonin delivery at the ocular level. Further therapeutic strategies should take into consideration of these risks that caused by delivery approach.
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Affiliation(s)
- Ye Tao
- Department of Ophthalmology, People's hospital of Zhengzhou University, Zhengzhou, PR China.,Department of physiology and neuroscience, Basic college of medicine, Zhengzhou University Zhengzhou, PR China
| | - Bang Hu
- Department of Colorectal Surgery, The Sixth Affiliated Hospital, Sun Yat-sen University, Guangzhou, PR China
| | - Zhao Ma
- Department of Neurosurgery, Central Hospital of Wuhan, Tongji Medical College, Huazhong University of Science and Technology, Wu Han, PR China
| | - Haijun Li
- Department of Ophthalmology, People's hospital of Zhengzhou University, Zhengzhou, PR China.,Department of physiology and neuroscience, Basic college of medicine, Zhengzhou University Zhengzhou, PR China
| | - Enming Du
- Department of Ophthalmology, People's hospital of Zhengzhou University, Zhengzhou, PR China.,Department of physiology and neuroscience, Basic college of medicine, Zhengzhou University Zhengzhou, PR China
| | - Gang Wang
- Department of Ophthalmology, People's hospital of Zhengzhou University, Zhengzhou, PR China.,Department of physiology and neuroscience, Basic college of medicine, Zhengzhou University Zhengzhou, PR China
| | - Biao Xing
- Department of Neurosurgery, Central Hospital of Wuhan, Tongji Medical College, Huazhong University of Science and Technology, Wu Han, PR China
| | - Jie Ma
- Department of Neurosurgery, Central Hospital of Wuhan, Tongji Medical College, Huazhong University of Science and Technology, Wu Han, PR China
| | - Zongming Song
- Department of Ophthalmology, People's hospital of Zhengzhou University, Zhengzhou, PR China.,Department of physiology and neuroscience, Basic college of medicine, Zhengzhou University Zhengzhou, PR China
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34
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Antagonistic Center-Surround Mechanisms for Direction Selectivity in the Retina. Cell Rep 2021; 31:107608. [PMID: 32375036 PMCID: PMC7221349 DOI: 10.1016/j.celrep.2020.107608] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/07/2019] [Revised: 01/22/2020] [Accepted: 04/13/2020] [Indexed: 12/29/2022] Open
Abstract
An antagonistic center-surround receptive field is a key feature in sensory processing, but how it contributes to specific computations such as direction selectivity is often unknown. Retinal On-starburst amacrine cells (SACs), which mediate direction selectivity in direction-selective ganglion cells (DSGCs), exhibit antagonistic receptive field organization: depolarizing to light increments and decrements in their center and surround, respectively. We find that a repetitive stimulation exhausts SAC center and enhances its surround and use it to study how center-surround responses contribute to direction selectivity. Center, but not surround, activation induces direction-selective responses in SACs. Nevertheless, both SAC center and surround elicited direction-selective responses in DSGCs, but to opposite directions. Physiological and modeling data suggest that the opposing direction selectivity can result from inverted temporal balance between excitation and inhibition in DSGCs, implying that SAC's response timing dictates direction selectivity. Our findings reveal antagonistic center-surround mechanisms for direction selectivity and demonstrate how context-dependent receptive field reorganization enables flexible computations.
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35
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Schottdorf M, Lee BB. A quantitative description of macaque ganglion cell responses to natural scenes: the interplay of time and space. J Physiol 2021; 599:3169-3193. [PMID: 33913164 DOI: 10.1113/jp281200] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/09/2020] [Accepted: 04/20/2021] [Indexed: 11/08/2022] Open
Abstract
KEY POINTS Responses to natural scenes are the business of the retina. We find primate ganglion cell responses to such scenes consistent with those to simpler stimuli. A biophysical model confirmed this and predicted ganglion cell responses with close to retinal reliability. Primate ganglion cell responses to natural scenes were driven by temporal variations in colour and luminance over the receptive field centre caused by eye movements, and little influenced by interaction of centre and surround with structure in the scene. We discuss implications in the context of efficient coding of the visual environment. Much information in a higher spatiotemporal frequency band is concentrated in the magnocellular pathway. ABSTRACT Responses of visual neurons to natural scenes provide a link between classical descriptions of receptive field structure and visual perception of the natural environment. A natural scene video with a movement pattern resembling that of primate eye movements was used to evoke responses from macaque ganglion cells. Cell responses were well described through known properties of cell receptive fields. Different analyses converge to show that responses primarily derive from the temporal pattern of stimulation derived from eye movements, rather than spatial receptive field structure beyond centre size and position. This was confirmed using a model that predicted ganglion cell responses close to retinal reliability, with only a small contribution of the surround relative to the centre. We also found that the spatiotemporal spectrum of the stimulus is modified in ganglion cell responses, and this can reduce redundancy in the retinal signal. This is more pronounced in the magnocellular pathway, which is much better suited to transmit the detailed structure of natural scenes than the parvocellular pathway. Whitening is less important for chromatic channels. Taken together, this shows how a complex interplay across space, time and spectral content sculpts ganglion cell responses.
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Affiliation(s)
- Manuel Schottdorf
- Max Planck Institute for Dynamics and Self-Organization, Göttingen, D-37077, Germany.,Max Planck Institute of Experimental Medicine, Göttingen, D-37075, Germany.,Princeton Neuroscience Institute, Princeton, NJ, 08544, USA
| | - Barry B Lee
- Graduate Center for Vision Research, Department of Biological Sciences, SUNY College of Optometry, 33 West 42nd St., New York, NY, 10036, USA.,Department of Neurobiology, Max Planck Institute for Biophysical Chemistry, Göttingen, D-37077, Germany
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36
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Goel M, Mangel SC. Dopamine-Mediated Circadian and Light/Dark-Adaptive Modulation of Chemical and Electrical Synapses in the Outer Retina. Front Cell Neurosci 2021; 15:647541. [PMID: 34025356 PMCID: PMC8131545 DOI: 10.3389/fncel.2021.647541] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/30/2020] [Accepted: 04/06/2021] [Indexed: 12/17/2022] Open
Abstract
The vertebrate retina, like most other brain regions, undergoes relatively slow alterations in neural signaling in response to gradual changes in physiological conditions (e.g., activity changes to rest), or in response to gradual changes in environmental conditions (e.g., day changes into night). As occurs elsewhere in the brain, the modulatory processes that mediate slow adaptation in the retina are driven by extrinsic signals (e.g., changes in ambient light level) and/or by intrinsic signals such as those of the circadian (24-h) clock in the retina. This review article describes and discusses the extrinsic and intrinsic modulatory processes that enable neural circuits in the retina to optimize their visual performance throughout day and night as the ambient light level changes by ~10 billion-fold. In the first synaptic layer of the retina, cone photoreceptor cells form gap junctions with rods and signal cone-bipolar and horizontal cells (HCs). Distinct extrinsic and intrinsic modulatory processes in this synaptic layer are mediated by long-range feedback of the neuromodulator dopamine. Dopamine is released by dopaminergic cells, interneurons whose cell bodies are located in the second synaptic layer of the retina. Distinct actions of dopamine modulate chemical and electrical synapses in day and night. The retinal circadian clock increases dopamine release in the day compared to night, activating high-affinity dopamine D4 receptors on cones. This clock effect controls electrical synapses between rods and cones so that rod-cone electrical coupling is minimal in the day and robust at night. The increase in rod-cone coupling at night improves the signal-to-noise ratio and the reliability of very dim multi-photon light responses, thereby enhancing detection of large dim objects on moonless nights.Conversely, maintained (30 min) bright illumination in the day compared to maintained darkness releases sufficient dopamine to activate low-affinity dopamine D1 receptors on cone-bipolar cell dendrites. This non-circadian light/dark adaptive process regulates the function of GABAA receptors on ON-cone-bipolar cell dendrites so that the receptive field (RF) surround of the cells is strong following maintained bright illumination but minimal following maintained darkness. The increase in surround strength in the day following maintained bright illumination enhances the detection of edges and fine spatial details.
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Affiliation(s)
- Manvi Goel
- Department of Neuroscience, Ohio State University College of Medicine, Columbus, OH, United States
| | - Stuart C Mangel
- Department of Neuroscience, Ohio State University College of Medicine, Columbus, OH, United States
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Nonlinear Spatial Integration Underlies the Diversity of Retinal Ganglion Cell Responses to Natural Images. J Neurosci 2021; 41:3479-3498. [PMID: 33664129 PMCID: PMC8051676 DOI: 10.1523/jneurosci.3075-20.2021] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/07/2020] [Revised: 02/05/2021] [Accepted: 02/09/2021] [Indexed: 02/06/2023] Open
Abstract
How neurons encode natural stimuli is a fundamental question for sensory neuroscience. In the early visual system, standard encoding models assume that neurons linearly filter incoming stimuli through their receptive fields, but artificial stimuli, such as contrast-reversing gratings, often reveal nonlinear spatial processing. We investigated to what extent such nonlinear processing is relevant for the encoding of natural images in retinal ganglion cells in mice of either sex. How neurons encode natural stimuli is a fundamental question for sensory neuroscience. In the early visual system, standard encoding models assume that neurons linearly filter incoming stimuli through their receptive fields, but artificial stimuli, such as contrast-reversing gratings, often reveal nonlinear spatial processing. We investigated to what extent such nonlinear processing is relevant for the encoding of natural images in retinal ganglion cells in mice of either sex. We found that standard linear receptive field models yielded good predictions of responses to flashed natural images for a subset of cells but failed to capture the spiking activity for many others. Cells with poor model performance displayed pronounced sensitivity to fine spatial contrast and local signal rectification as the dominant nonlinearity. By contrast, sensitivity to high-frequency contrast-reversing gratings, a classical test for nonlinear spatial integration, was not a good predictor of model performance and thus did not capture the variability of nonlinear spatial integration under natural images. In addition, we also observed a class of nonlinear ganglion cells with inverse tuning for spatial contrast, responding more strongly to spatially homogeneous than to spatially structured stimuli. These findings highlight the diversity of receptive field nonlinearities as a crucial component for understanding early sensory encoding in the context of natural stimuli. SIGNIFICANCE STATEMENT Experiments with artificial visual stimuli have revealed that many types of retinal ganglion cells pool spatial input signals nonlinearly. However, it is still unclear how relevant this nonlinear spatial integration is when the input signals are natural images. Here we analyze retinal responses to natural scenes in large populations of mouse ganglion cells. We show that nonlinear spatial integration strongly influences responses to natural images for some ganglion cells, but not for others. Cells with nonlinear spatial integration were sensitive to spatial structure inside their receptive fields, and a small group of cells displayed a surprising sensitivity to spatially homogeneous stimuli. Traditional analyses with contrast-reversing gratings did not predict this variability of nonlinear spatial integration under natural images.
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38
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Farzanfar A, Shayegh F, Nazari B, Sadri S. Physiological constraints of visual pathway lead to more efficient coding of information in retina. J Theor Biol 2020; 506:110418. [PMID: 32738265 DOI: 10.1016/j.jtbi.2020.110418] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/31/2019] [Revised: 06/11/2020] [Accepted: 07/18/2020] [Indexed: 10/23/2022]
Abstract
Nowadays, numerous studies have investigated the modeling of efficient neural encoding processes in the retina of the eye to encode the sensory data. Retina, as the innermost coat of the eye, is the first and the most important area of the visual neural system of mammalians, which is responsible for neural processes. Retina encodes the information of light intensity into a sequence of spikes, and sends them to retinal ganglion cells (RGCs) for further processing. An appropriate retinal encoding model should be adapted to the real retina as much as possible by considering the physiological constraints of the visual pathway to transfer most of the information of the input signal to the brain without too much redundancy of the channel. In this paper, inspired from the existing linear models of retinal encoding process, which have employed input noise and the spatial locality of the RGCs receptive fields (RFs) in the calculation of the encoding matrix, two extra physiological constraints, adapted from the real retina are taken into account so as to achieve a more realistic model for themammalian retina. These new constraints that are the correlation between RGCs and the spatial locality of the photoreceptors' projective fields (PFs), are modeled in a mathematical form and analyzed in detail. To quantify fidelity of the proposed encoding matrix and prove its superiority over existing models, various parameters of the models are calculated and presented in this paper: mean square error between the original and reconstructed image (MSE), the redundancy of the channel, the amount of information transferred through the channel, and the amount of wasted capacity for carrying input noise, to name a few. The results of these calculations show that the proposed model transfers input information with less redundancy of the channel. In other words, it reduces a portion of channel capacity which is wasted for carrying the input noise in comparison to the existing models. Also, due to considering extra physiological constraints in the proposed model, it is acceptable to have a slightly higher amount of MSE value in order to become similar to the real retina.
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Affiliation(s)
- Arezoo Farzanfar
- Department of Electrical and Computer Engineering, Isfahan University of Technology, Isfahan 84156-83111, Iran
| | - Farzaneh Shayegh
- Department of Electrical and Computer Engineering, Isfahan University of Technology, Isfahan 84156-83111, Iran
| | - Behzad Nazari
- Department of Electrical and Computer Engineering, Isfahan University of Technology, Isfahan 84156-83111, Iran.
| | - Saeid Sadri
- Department of Electrical and Computer Engineering, Isfahan University of Technology, Isfahan 84156-83111, Iran
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The role of contrast polarities in binocular luster: Low-level and high-level processes. Vision Res 2020; 176:141-155. [PMID: 32890940 DOI: 10.1016/j.visres.2020.08.006] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/23/2020] [Revised: 08/14/2020] [Accepted: 08/17/2020] [Indexed: 11/23/2022]
Abstract
The binocular fusion of two center-surround configurations, where one center is brighter, the other darker than the common surround, leads to a strong impression of luster in the central patch. Without reversed contrast polarities of the center patches, this impression is much weaker or even absent. However, we observed that in the latter case the perceived luster can be considerably enhanced by enclosing both centers with a thin ring of fixed luminance. Compared to the standard stimulus, this center-ring-surround configuration shows much less binocular rivalry and the luster has also a different, more glass-like material quality. In a psychophysical experiment, we examined how the magnitude of the lustrous response depends on the width of the ring, both in stimuli with reversed and consistent contrast polarities. It has been proposed that binocular luster results from a neuronal conflict between ON and OFF visual pathways. To test this hypothesis with respect to our data, we developed a simple model to estimate the amount of interocular conflict resulting from a given binocular stimulus pair and applied it to all stimuli used in the experiment. We found strong correlations between the interocular conflict measure and the strength of luster observed in the experiment, suggesting that a common low-level mechanism determines the magnitude of the lustrous response. Regarding the differences in the perceived material quality of the lustrous impressions, we discuss evidence indicating that high-level processes are involved that promote the visual system's interpretation of the ring-stimuli as a certain depth-segmented 3D scene.
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40
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Xie J, Goodbourn PT, Bui BV, Sztal TE, Jusuf PR. Correspondence Between Behavioral, Physiological, and Anatomical Measurements of Visual Function in Inhibitory Neuron–Ablated Zebrafish. ACTA ACUST UNITED AC 2019; 60:4681-4690. [DOI: 10.1167/iovs.19-27544] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
Affiliation(s)
- Jiaheng Xie
- School of Biosciences, The University of Melbourne, Melbourne, Australia
| | - Patrick T. Goodbourn
- Department of Optometry and Vision Sciences, The University of Melbourne, Melbourne, Australia
| | - Bang V. Bui
- Melbourne School of Psychological Sciences, The University of Melbourne, Melbourne, Australia
| | - Tamar E. Sztal
- School of Biological Sciences, Monash University, Melbourne, Australia
| | - Patricia R. Jusuf
- School of Biosciences, The University of Melbourne, Melbourne, Australia
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Van Hook MJ, Nawy S, Thoreson WB. Voltage- and calcium-gated ion channels of neurons in the vertebrate retina. Prog Retin Eye Res 2019; 72:100760. [PMID: 31078724 PMCID: PMC6739185 DOI: 10.1016/j.preteyeres.2019.05.001] [Citation(s) in RCA: 45] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/28/2019] [Revised: 04/25/2019] [Accepted: 05/01/2019] [Indexed: 02/06/2023]
Abstract
In this review, we summarize studies investigating the types and distribution of voltage- and calcium-gated ion channels in the different classes of retinal neurons: rods, cones, horizontal cells, bipolar cells, amacrine cells, interplexiform cells, and ganglion cells. We discuss differences among cell subtypes within these major cell classes, as well as differences among species, and consider how different ion channels shape the responses of different neurons. For example, even though second-order bipolar and horizontal cells do not typically generate fast sodium-dependent action potentials, many of these cells nevertheless possess fast sodium currents that can enhance their kinetic response capabilities. Ca2+ channel activity can also shape response kinetics as well as regulating synaptic release. The L-type Ca2+ channel subtype, CaV1.4, expressed in photoreceptor cells exhibits specific properties matching the particular needs of these cells such as limited inactivation which allows sustained channel activity and maintained synaptic release in darkness. The particular properties of K+ and Cl- channels in different retinal neurons shape resting membrane potentials, response kinetics and spiking behavior. A remaining challenge is to characterize the specific distributions of ion channels in the more than 100 individual cell types that have been identified in the retina and to describe how these particular ion channels sculpt neuronal responses to assist in the processing of visual information by the retina.
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Affiliation(s)
- Matthew J Van Hook
- Truhlsen Eye Institute, Department of Ophthalmology & Visual Sciences, University of Nebraska Medical Center, Omaha, NE, USA
| | - Scott Nawy
- Truhlsen Eye Institute, Department of Ophthalmology & Visual Sciences, University of Nebraska Medical Center, Omaha, NE, USA; Department Pharmacology & Experimental Neuroscience(2), University of Nebraska Medical Center, Omaha, NE, USA
| | - Wallace B Thoreson
- Truhlsen Eye Institute, Department of Ophthalmology & Visual Sciences, University of Nebraska Medical Center, Omaha, NE, USA; Department Pharmacology & Experimental Neuroscience(2), University of Nebraska Medical Center, Omaha, NE, USA.
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42
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Patterson SS, Neitz M, Neitz J. Reconciling Color Vision Models With Midget Ganglion Cell Receptive Fields. Front Neurosci 2019; 13:865. [PMID: 31474825 PMCID: PMC6707431 DOI: 10.3389/fnins.2019.00865] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/01/2019] [Accepted: 08/02/2019] [Indexed: 11/13/2022] Open
Abstract
Midget retinal ganglion cells (RGCs) make up the majority of foveal RGCs in the primate retina. The receptive fields of midget RGCs exhibit both spectral and spatial opponency and are implicated in both color and achromatic form vision, yet the exact mechanisms linking their responses to visual perception remain unclear. Efforts to develop color vision models that accurately predict all the features of human color and form vision based on midget RGCs provide a case study connecting experimental and theoretical neuroscience, drawing on diverse research areas such as anatomy, physiology, psychophysics, and computer vision. Recent technological advances have allowed researchers to test some predictions of color vision models in new and precise ways, producing results that challenge traditional views. Here, we review the progress in developing models of color-coding receptive fields that are consistent with human psychophysics, the biology of the primate visual system and the response properties of midget RGCs.
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Affiliation(s)
- Sara S Patterson
- Department of Ophthalmology, University of Washington, Seattle, WA, United States.,Neuroscience Graduate Program, University of Washington, Seattle, WA, United States
| | - Maureen Neitz
- Department of Ophthalmology, University of Washington, Seattle, WA, United States
| | - Jay Neitz
- Department of Ophthalmology, University of Washington, Seattle, WA, United States
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Odor Concentration Change Coding in the Olfactory Bulb. eNeuro 2019; 6:eN-NWR-0396-18. [PMID: 30834303 PMCID: PMC6397952 DOI: 10.1523/eneuro.0396-18.2019] [Citation(s) in RCA: 20] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/14/2018] [Revised: 01/04/2019] [Accepted: 01/16/2019] [Indexed: 11/21/2022] Open
Abstract
Dynamical changes in the environment strongly impact our perception. Likewise, sensory systems preferentially represent stimulus changes, enhancing temporal contrast. In olfaction, odor concentration changes across consecutive inhalations (ΔCt) can guide odor source localization, yet the neural representation of ΔCt has not been studied in vertebrates. We have found that, in the mouse olfactory bulb, a subset of mitral/tufted (M/T) cells represents ΔCt, enhancing the contrast between different concentrations. These concentration change responses are direction selective: they respond either to increments or decrements of concentration, reminiscent of ON and OFF selectivity in the retina. This contrast enhancement scales with the magnitude, but not the duration of the concentration step. Further, ΔCt can be read out from the total spike count per sniff, unlike odor identity and intensity, which are represented by fast temporal spike patterns. Our results demonstrate that a subset of M/T cells represents ΔCt, providing a signal that may instruct navigational decisions in downstream olfactory circuits.
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