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Anane J, Owusu E, Rivera G, Bandyopadhyay D. Iron-Imine Cocktail in Drug Development: A Contemporary Update. Int J Mol Sci 2024; 25:2263. [PMID: 38396940 PMCID: PMC10888693 DOI: 10.3390/ijms25042263] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/28/2023] [Revised: 02/04/2024] [Accepted: 02/07/2024] [Indexed: 02/25/2024] Open
Abstract
Organometallic drug development is still in its early stage, but recent studies show that organometallics having iron as the central atom have the possibility of becoming good drug candidates because iron is an important micro-nutrient, and it is compatible with many biological systems, including the human body. Being an eco-friendly Lewis acid, iron can accept the lone pair of electrons from imino(sp2)-nitrogen, and the resultant iron-imine complexes with iron as a central atom have the possibility of interacting with several proteins and enzymes in humans. Iron-imine complexes have demonstrated significant potential with anticancer, bactericidal, fungicidal, and other medicinal activities in recent years. This article systematically discusses major synthetic methods and pharmacological potentials of iron-imine complexes having in vitro activity to significant clinical performance from 2016 to date. In a nutshell, this manuscript offers a simplistic view of iron complexes in medicinal inorganic chemistry: for instance, iron is presented as an "eco-friendly non-toxic" metal (as opposed to platinum) that will lead to non-toxic pharmaceuticals. The abundant literature on iron chelators shows that many iron complexes, particularly if redox-active in cells, can be quite cytotoxic, which can be beneficial for future targeted therapies. While we made every effort to include all the related papers, any omission is purely unintentional.
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Affiliation(s)
- Judith Anane
- School of Integrative Biological and Chemical Sciences (SIBCS), University of Texas Rio Grande Valley, Edinburg, TX 78539, USA; (J.A.); (E.O.)
| | - Esther Owusu
- School of Integrative Biological and Chemical Sciences (SIBCS), University of Texas Rio Grande Valley, Edinburg, TX 78539, USA; (J.A.); (E.O.)
| | - Gildardo Rivera
- Laboratorio de Biotecnología Farmacéutica, Centro de Biotecnología Genómica, Instituto Politécnico Nacional, Reynosa 88710, Mexico;
| | - Debasish Bandyopadhyay
- School of Integrative Biological and Chemical Sciences (SIBCS), University of Texas Rio Grande Valley, Edinburg, TX 78539, USA; (J.A.); (E.O.)
- School of Earth, Environmental, and Marine Sciences (SEEMS), University of Texas Rio Grande Valley, Edinburg, TX 78539, USA
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2
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Karipcin F, Öztoprak UT, Dede B, Şahin S, Özmen İ. Synthesis and DFT calculations of metal(II) oxime complexes bearing cysteine as coligand and investigation of their biological evolutions in vitro and in silico. J Biomol Struct Dyn 2023:1-20. [PMID: 37968962 DOI: 10.1080/07391102.2023.2281638] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/05/2023] [Accepted: 11/04/2023] [Indexed: 11/17/2023]
Abstract
New complexes with the formula of [ML(Cys)(H2O)2] were obtained as a result of the reaction between the oxime ligand [HL: 4-(4-bromophenylaminoisonitrosoacetyl)biphenyl], cysteine (Cys), and the metal(II) salts (Mn, Ni, Co, Zn, Cu). The newly synthesized compounds were characterized using conventional techniques such as molar conductance, magnetic measurements, elemental analysis, infrared spectroscopy, and thermal analysis (TGA/DTA). Based on the conductivity measurements in DMF, it was determined that the complexes were non-electrolytes. The TGA/DTA analysis was performed to examine the thermal stability and degradation behavior of all samples, and results demonstrated that metal oxides or sulfides formed as a result of the decompositions. In conjunction with other data obtained, the elemental analysis confirmed the octahedral coordination of the complexes with deprotonated oxime (O, O-donor) and amino acid (N, S-donor) ligands and two coordinated waters. The compounds' optimized geometries, molecular electrostatic potential diagrams, and frontier molecular orbitals were computed at the DFT/B3LYP level using the 6-311 G(d,p) and LANL2DZ basis sets. The antibacterial and DNA cleavage activities of all synthesized compounds were also screened, and molecular docking simulations were performed. According to the results of molecular docking studies conducted with three different proteins, the best interaction was found to be between HL-1HNJ with a binding energy of -9.5 kcal/mol. The stability of the HL-1HNJ complex was also verified by a molecular dynamics simulation performed for 50 ns.Communicated by Ramaswamy H. Sarma.
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Affiliation(s)
- Fatma Karipcin
- Department of Chemistry, Nevşehir Hacı Bektaş Veli University, Nevşehir, Turkey
| | | | - Bülent Dede
- Department of Chemistry, Süleyman Demirel University, Isparta, Turkey
| | - Selmihan Şahin
- Department of Chemistry, Süleyman Demirel University, Isparta, Turkey
| | - İsmail Özmen
- Department of Chemistry, Süleyman Demirel University, Isparta, Turkey
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3
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Chavez-Urias I, López-González LE, Plascencia-Martínez DF, García JJ, Flores-Alamo M, Sugich-Miranda R, Medrano F, Picos-Corrales LA, López-Gastélum KA, Velázquez-Contreras EF, Rocha-Alonzo F. l-Isoleucine-Schiff Base Copper(II) Coordination Polymers: Crystal Structure, Spectroscopic, Hirshfeld Surface, and DFT Analyses. ACS OMEGA 2023; 8:24601-24614. [PMID: 37457461 PMCID: PMC10339395 DOI: 10.1021/acsomega.3c02878] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 04/26/2023] [Accepted: 06/13/2023] [Indexed: 07/18/2023]
Abstract
A new copper(II) coordination polymer was synthesized from the l-isoleucine-Schiff base and characterized by elemental analysis, Fourier transform infrared (FT-IR) spectroscopy, ultraviolet-visible (UV-vis) spectroscopy, single-crystal X-ray diffraction (XRD) analysis, electronic paramagnetic resonance, and thermogravimetric analysis. XRD analysis confirmed the square planar coordination geometry of metallic centers and a zipper-like polymer structure. Vibrational, electronic, and paramagnetic spectroscopies and thermal analysis were consistent with the crystal structure. A Hirshfeld surface (HS) and density functional theory (DFT) analyses were employed to gain additional insight into interactions responsible for complex packing. The quantitative examination of two-dimensional (2D) fingerprint plots revealed, among other van der Waals forces, the dominating participation of H···H and H···Cl interactions in the molecular packing. The use of computational methods provided great help in detailing the supramolecular interactions occurring in the crystal, which were mainly van der Waals attractions. The electronic transition analysis helped corroborate the electronic transitions observed experimentally in the absorption spectrum. The frequency and vibrational mode analysis gave a deeper insight into the characterization of the CuLCL complex.
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Affiliation(s)
- Iván
F. Chavez-Urias
- Departamento
de Investigación en Polímeros y Materiales, Universidad de Sonora, Calle Rosales y Blvd. Luis Encinas s/n, Col. Centro, Hermosillo, Sonora 83000, México
| | - Luis E. López-González
- Centro
de Investigación Científica y de Educación Superior
de Ensenada, Carretera Tijuana-Ensenada 3918, Zona Playitas, Ensenada, Baja California 22860, México
| | - Damian F. Plascencia-Martínez
- Departamento
de Investigación en Polímeros y Materiales, Universidad de Sonora, Calle Rosales y Blvd. Luis Encinas s/n, Col. Centro, Hermosillo, Sonora 83000, México
| | - Juventino J. García
- Facultad
de Química, Universidad Nacional
Autónoma de México, Circuito Exterior Cd. Universitaria, Coyoacán,
Ciudad de México, Ciudad de México 04510, México
| | - Marcos Flores-Alamo
- Facultad
de Química, Universidad Nacional
Autónoma de México, Circuito Exterior Cd. Universitaria, Coyoacán,
Ciudad de México, Ciudad de México 04510, México
| | - Rocío Sugich-Miranda
- Departamento
de Ciencias Químico-Biológicas, Universidad de Sonora, Calle Rosales y Blvd. Luis Encinas s/n, Col. Centro, Hermosillo, Sonora 83000, México
| | - Felipe Medrano
- Departamento
de Ciencias Químico-Biológicas, Universidad de Sonora, Calle Rosales y Blvd. Luis Encinas s/n, Col. Centro, Hermosillo, Sonora 83000, México
| | - Lorenzo A. Picos-Corrales
- Facultad
de Ingeniería Culiacán, Universidad
Autónoma de Sinaloa, Ciudad Universitaria, Culiacán, Sinaloa 80013, México
| | - Karla-Alejandra López-Gastélum
- Departamento
de Ciencias Químico-Biológicas, Universidad de Sonora, Calle Rosales y Blvd. Luis Encinas s/n, Col. Centro, Hermosillo, Sonora 83000, México
- Centro de
Investigación en Alimentación y Desarrollo, Carretera a Ejido La Victoria Km
0.6, Hermosillo, Sonora 83304, México
| | - Enrique F. Velázquez-Contreras
- Departamento
de Investigación en Polímeros y Materiales, Universidad de Sonora, Calle Rosales y Blvd. Luis Encinas s/n, Col. Centro, Hermosillo, Sonora 83000, México
| | - Fernando Rocha-Alonzo
- Departamento
de Ciencias Químico-Biológicas, Universidad de Sonora, Calle Rosales y Blvd. Luis Encinas s/n, Col. Centro, Hermosillo, Sonora 83000, México
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4
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Mohamed SE, Ramadan RM, Aboelhasan AE, Abdel Aziz AA. Design, synthesis, biomedical investigation, DFT calculation and molecular docking of novel Ru(II)-mixed ligand complexes. J Biomol Struct Dyn 2023; 41:1233-1252. [PMID: 34927559 DOI: 10.1080/07391102.2021.2017355] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
Abstract
A novel series of bioactive water-soluble mononuclear Ru(II)-mixed ligand complexes of 2,2'-bipyridyl and V-shaped Schiff base ligands were synthesized and structurally characterized. Biomedical activities of Ru(II) complexes have been tested in view of antioxidant activities, interaction with calf thymus DNA (CT-DNA), and anticancer performance. The optimized structure of these complexes has been further supported by density functional theory (DFT) calculations. Further, validation of the interaction studies of some complexes was accomplished by carrying out molecular docking studies with DNA using molecular operating environment (MOE) software are reported.Communicated by Ramaswamy H. Sarma.
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Affiliation(s)
- Sara E Mohamed
- Chemistry Department, Faculty of Science, Ain Shams University, Cairo, Abbasia, Egypt
| | - Ramadan M Ramadan
- Chemistry Department, Faculty of Science, Ain Shams University, Cairo, Abbasia, Egypt
| | - Amir E Aboelhasan
- Chemistry Department, Faculty of Science, Ain Shams University, Cairo, Abbasia, Egypt
| | - Ayman A Abdel Aziz
- Chemistry Department, Faculty of Science, Ain Shams University, Cairo, Abbasia, Egypt
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5
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A new Schiff base containing 5-FU and its metal Complexes: Synthesis, Characterization, and biological activities. INORG CHEM COMMUN 2021. [DOI: 10.1016/j.inoche.2021.109060] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
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6
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López-Gastélum KA, Velázquez-Contreras EF, García JJ, Flores-Alamo M, Aguirre G, Chávez-Velasco D, Narayanan J, Rocha-Alonzo F. Mononuclear and Tetranuclear Copper(II) Complexes Bearing Amino Acid Schiff Base Ligands: Structural Characterization and Catalytic Applications. Molecules 2021; 26:molecules26237301. [PMID: 34885882 PMCID: PMC8658810 DOI: 10.3390/molecules26237301] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/24/2021] [Revised: 11/18/2021] [Accepted: 11/22/2021] [Indexed: 11/18/2022] Open
Abstract
Two new glycine-Schiff base copper(II) complexes were synthesized. Single crystal X-ray diffraction (SCXRD) allowed us to establish the structure of both complexes in the solid state. The glycine-Schiff base copper(II) complex derived from 2′-hydroxy-5′-nitroacetophenone showed a mononuclear hydrated structure, in which the Schiff base acted as a tridentate ligand, and the glycine-Schiff base copper(II) complex derived from 2′-hydroxy-5′-methylacetophenone showed a less common tetranuclear anhydrous metallocyclic structure, in which the Schiff base acted as a tetradentate ligand. In both compounds, copper(II) had a tetracoordinated square planar geometry. The results of vibrational, electronic, and paramagnetic spectroscopies, as well as thermal analysis, were consistent with the crystal structures. Both complexes were evaluated as catalysts in the olefin cyclopropanation by carbene transference, and both led to very high diastereoselectivity (greater than 98%).
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Affiliation(s)
- Karla-Alejandra López-Gastélum
- Departamento de Investigación en Polímeros y Materiales, Universidad de Sonora, Rosales and Luis Encinas s/n, Col. Centro, Hermosillo 83000, Sonora, Mexico
- Correspondence: (K.-A.L.-G.); (E.F.V.-C.); (F.R.-A.)
| | - Enrique F. Velázquez-Contreras
- Departamento de Investigación en Polímeros y Materiales, Universidad de Sonora, Rosales and Luis Encinas s/n, Col. Centro, Hermosillo 83000, Sonora, Mexico
- Correspondence: (K.-A.L.-G.); (E.F.V.-C.); (F.R.-A.)
| | - Juventino J. García
- Facultad de Química, Universidad Nacional Autónoma de México, Circuito Exterior Cd. Universitaria, Coyoacán, Ciudad de México 04510, Ciudad de México, Mexico; (J.J.G.); (M.F.-A.)
| | - Marcos Flores-Alamo
- Facultad de Química, Universidad Nacional Autónoma de México, Circuito Exterior Cd. Universitaria, Coyoacán, Ciudad de México 04510, Ciudad de México, Mexico; (J.J.G.); (M.F.-A.)
| | - Gerardo Aguirre
- Centro de Graduados e Investigación, Instituto Tecnológico de Tijuana, Apartado Postal 1166, Tijuana 22000, Baja California, Mexico; (G.A.); (D.C.-V.)
| | - Daniel Chávez-Velasco
- Centro de Graduados e Investigación, Instituto Tecnológico de Tijuana, Apartado Postal 1166, Tijuana 22000, Baja California, Mexico; (G.A.); (D.C.-V.)
| | - Jayanthi Narayanan
- División de Ingeniería en Nanotecnología, Universidad Politécnica del Valle de México, Av. Mexiquense s/n esquina Av. Universidad Politécnica, Col. Villa Esmeralda, Tultitlan 54910, Estado de México, Mexico;
| | - Fernando Rocha-Alonzo
- Departamento de Ciencias Químico Biológicas, Universidad de Sonora, Calle Rosales y Blvd. Luis Encinas s/n, Col. Centro, Hermosillo 83000, Sonora, Mexico
- Correspondence: (K.-A.L.-G.); (E.F.V.-C.); (F.R.-A.)
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7
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Zaki NG, Mahmoud WH, El Kerdawy AM, Abdallah AM, Mohamed GG. Heteroleptic complexes of cocaine/TMEDA with some f block metals: Synthesis, DFT studies, spectral, thermal, cytotoxicity and antimetastatic properties. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2020; 229:117938. [PMID: 31841673 DOI: 10.1016/j.saa.2019.117938] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/19/2019] [Revised: 11/29/2019] [Accepted: 12/07/2019] [Indexed: 06/10/2023]
Abstract
A series of new three heteroleptic complexes of the general formula [Ln(Cn)(TMEDA)Cl(OH2)]·2Cl·xH2O, (where Ln = La(III), Er(III) and Yb(III), Cn = cocaine and TMEDA = N,N,N',N'-tetramethylethylenediamine) were synthesized, structurally characterized by elemental analysis, spectroscopic methods, molar conductivity and mass spectrometry. Thermal properties of the synthesized complexes and their kinetic thermodynamic parameters were studied. Theoretical calculations including geometry optimization, electronic structure and electronic and thermal energies were carried out using DFT and TD-DFT calculations at B3LYP/LANL2DZ level of theory and the different quantum chemical parameters were calculated. The in vitro antiproliferative activity of the newly synthesized complexes was assessed by MTT assay on MCF-7 and HepG-2 cancer cell lines. Yb(III) complex showed promising cytotoxic activity comparable to that of cisplatin on both cell lines with minimum effect on human normal cells. Further molecular mechanistic investigations showed that Yb(III) complex is an apoptotic inducer as it raises the caspase-3 and caspase-9 cellular level in the MCF-7 cell line. Furthermore, it showed an elevating effect on the level of the tumor suppressor nuclear proteins P21 and P27 concentrations in MCF-7 cells. Moreover, Yb(III) complex hindered the cellular scavenger system of the reactive oxygen species through reducing the glutathione peroxidase (GPx) cellular level imperiling MCF-7 cells by unmanageable oxidative stress. In addition to its cytotoxic effect, Yb(III) complex showed antimetastatic properties as it decreased the cellular levels of matrix metalloproteinases MMP-3 and MMP-9. These results showed that the Yb(III) complex is a promising cytotoxic metal-based agent that exerts its action through various molecular mechanisms with minimum effects on normal cells and with additional antimetastatic properties.
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Affiliation(s)
- Nadia G Zaki
- Narcotic Research Department, National Center for Social and Criminological Research (NCSCR), Giza 11561, Egypt
| | - Walaa H Mahmoud
- Chemistry Department, Faculty of Science, Cairo University, Giza 12613, Egypt
| | - Ahmed M El Kerdawy
- Department of Pharmaceutical Chemistry, Faculty of Pharmacy, Cairo University, Kasr El-Aini Street, Cairo, P.O. Box 11562, Egypt; Molecular Modeling Unit, Faculty of Pharmacy, Cairo University, Kasr El-Aini Street, Cairo, P.O. Box 11562, Egypt; Department of Pharmaceutical Chemistry, Faculty of Pharmacy, New Giza University, Newgiza, km 22 Cairo-Alexandria Desert Road, Cairo, Egypt
| | - Abanoub Mosaad Abdallah
- Narcotic Research Department, National Center for Social and Criminological Research (NCSCR), Giza 11561, Egypt.
| | - Gehad G Mohamed
- Chemistry Department, Faculty of Science, Cairo University, Giza 12613, Egypt; Egypt Nanotechnology Center, Cairo University, El-Sheikh Zayed, 6(th) October City, Giza 12588, Egypt
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Liu L, Chen L, Zhang YH, Wei L, Cheng S, Kong X, Zheng M, Huang T, Cai YD. Analysis and prediction of drug-drug interaction by minimum redundancy maximum relevance and incremental feature selection. J Biomol Struct Dyn 2016; 35:312-329. [PMID: 26750516 DOI: 10.1080/07391102.2016.1138142] [Citation(s) in RCA: 55] [Impact Index Per Article: 6.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
Abstract
Drug-drug interaction (DDI) defines a situation in which one drug affects the activity of another when both are administered together. DDI is a common cause of adverse drug reactions and sometimes also leads to improved therapeutic effects. Therefore, it is of great interest to discover novel DDIs according to their molecular properties and mechanisms in a robust and rigorous way. This paper attempts to predict effective DDIs using the following properties: (1) chemical interaction between drugs; (2) protein interactions between the targets of drugs; and (3) target enrichment of KEGG pathways. The data consisted of 7323 pairs of DDIs collected from the DrugBank and 36,615 pairs of drugs constructed by randomly combining two drugs. Each drug pair was represented by 465 features derived from the aforementioned three categories of properties. The random forest algorithm was adopted to train the prediction model. Some feature selection techniques, including minimum redundancy maximum relevance and incremental feature selection, were used to extract key features as the optimal input for the prediction model. The extracted key features may help to gain insights into the mechanisms of DDIs and provide some guidelines for the relevant clinical medication developments, and the prediction model can give new clues for identification of novel DDIs.
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Affiliation(s)
- Lili Liu
- a Intelligence Research Department, Information Center , Shanghai Institute of Materia Medica, Chinese Academy of Sciences , Shanghai 201203 , P. R. China
| | - Lei Chen
- b College of Information Engineering, Shanghai Maritime University , Shanghai 201306 , P. R. China
| | - Yu-Hang Zhang
- c Institute of Health Sciences, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences , Shanghai 200031 , P. R. China
| | - Lai Wei
- b College of Information Engineering, Shanghai Maritime University , Shanghai 201306 , P. R. China
| | - Shiwen Cheng
- b College of Information Engineering, Shanghai Maritime University , Shanghai 201306 , P. R. China
| | - Xiangyin Kong
- c Institute of Health Sciences, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences , Shanghai 200031 , P. R. China
| | - Mingyue Zheng
- d State Key Laboratory of Drug Research, Drug Discovery and Design Center , Shanghai Institute of Materia Medica, Chinese Academy of Sciences , Shanghai 201203 , P. R. China
| | - Tao Huang
- c Institute of Health Sciences, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences , Shanghai 200031 , P. R. China
| | - Yu-Dong Cai
- e School of Life Sciences, Shanghai University , Shanghai 200444 , P. R. China
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Stability and Structural Studies on Ni(II)–5-Fluorouracil Mixed Ligand Complex Systems. J SOLUTION CHEM 2016. [DOI: 10.1007/s10953-016-0440-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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10
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Das S, Subuddhi U. Studies on the complexation of diclofenac sodium with β–cyclodextrin: Influence of method of preparation. J Mol Struct 2015. [DOI: 10.1016/j.molstruc.2015.07.001] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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11
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Synthesis, characterization, crystal structure and antioxidant activity of Ni(II) and Cu(II) complexes with 2-formilpyridine N(4)-phenylthiosemicarbazone. Polyhedron 2015. [DOI: 10.1016/j.poly.2015.05.009] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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12
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Structural, morphological and biological investigations of some transition metal–5-Fluorouracil–amino acid mixed ligand complexes. Inorganica Chim Acta 2015. [DOI: 10.1016/j.ica.2015.07.002] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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