Fresh water, marine and terrestrial cyanobacteria display distinct allergen characteristics

Altered excitation energy transfer between phycobilisome and photosystems in the absence of ApcG, a small linker peptide, in Synechocystis sp. PCC 6803, a cyanobacterium

Phycobilisome (PBS) is a large pigment-protein complex in cyanobacteria and red algae responsible for capturing sunlight and transferring its energy to photosystems (PS). Spectroscopic and structural properties of various PBSs have been widely studied, however, the nature of so-called complex-complex interactions between PBS and PSs remains much less explored. In this work, we have investigated the function of a newly identified PBS linker protein, ApcG, some domain of which, together with a loop region (PB-loop in ApcE), is possibly located near the PBS-PS interface. Using Synechocystis sp. PCC 6803, we generated an ApcG deletion mutant and probed its deletion effect on the energetic coupling between PBS and photosystems. Steady-state and time-resolved spectroscopic characterization of the purified ΔApcG-PBS demonstrated that ApcG removal weakly affects the photophysical properties of PBS for which the spectroscopic properties of terminal energy emitters are comparable to those of PBS from wild-type strain. However, analysis of fluorescence decay imaging datasets reveals that ApcG deletion induces disruptions within the allophycocyanin (APC) core, resulting in the emergence (splitting) of two spectrally diverse subgroups with some short-lived APC. Profound spectroscopic changes of the whole ΔApcG mutant cell, however, emerge during state transition, a dynamic process of light scheme adaptation. The mutant cells in State I show a substantial increase in PBS-related fluorescence. On the other hand, global analysis of time-resolved fluorescence demonstrates that in general ApcG deletion does not alter or inhibit state transitions interpreted in terms of the changes of the PSII and PSI fluorescence emission intensity. The results revealed yet-to-be discovered mechanism of ApcG-docking induced excitation energy transfer regulation within PBS or to Photosystems.

Mechanisms of climate change and related air pollution on the immune system leading to allergic disease and asthma

Climate change is considered the greatest threat to global health. Greenhouse gases as well as global surface temperatures have increased causing more frequent and intense heat and cold waves, wildfires, floods, drought, altered rainfall patterns, hurricanes, thunderstorms, air pollution, and windstorms. These extreme weather events have direct and indirect effects on the immune system, leading to allergic disease due to exposure to pollen, molds, and other environmental pollutants. In this review, we will focus on immune mechanisms associated with allergy and asthma-related health risks induced by climate change events. We will review current understanding of the molecular and cellular mechanisms by which the changing environment mediates these effects.

The Physicochemical Properties and Antioxidant Activity of Spirulina (Artrhospira platensis) Chlorophylls Microencapsulated in Different Ratios of Gum Arabic and Whey Protein Isolate

Spirulina (Artrhospira platensis) is rich in chlorophylls (CH) and is used as a potential natural additive in the food industry. In this study, the CH content was extracted from spirulina powder after ultrasound treatment. Microcapsules were then prepared at different ratios of gum Arabic (GA) and whey protein isolate (WPI) through freeze-drying to improve the chemical stability of CH. As a result, a* and C* values of the microcapsules prepared from GA:WPI ratios (3:7) were −8.94 ± 0.05 and 15.44 ± 0.08, respectively. The GA fraction increased from 1 to 9, and encapsulation efficiency (EE) of microcapsules also increased by 9.62%. Moreover, the absorption peaks of CH at 2927 and 1626 cm⁻¹ in microcapsules emerged as a redshift detected by FT-IR. From SEM images, the morphology of microcapsules changed from broken glassy to irregular porous flake-like structures when the GA ratio increased. In addition, the coated microcapsules (GA:WPI = 3:7) showed the highest DPPH free radical scavenging activity (SA_DPPH) (56.38 ± 0.19) due to low moisture content and better chemical stability through thermogravimetric analysis (TGA). Conclusively, GA and WPI coacervates as the wall material may improve the stability of CH extracted from spirulina.

Cyanobacteria: Model Microorganisms and Beyond

In this review, the general background is provided on cyanobacteria, including morphology, cell membrane structure, and their photosynthesis pathway. The presence of cyanobacteria in nature, and their industrial applications are discussed, and their production of secondary metabolites are explained. Biofilm formation, as a common feature of microorganisms, is detailed and the role of cell diffusion in bacterial colonization is described. Then, the discussion is narrowed down to cyanobacterium Synechocystis, as a lab model microorganism. In this relation, the morphology of Synechocystis is discussed and its different elements are detailed. Type IV pili, the complex multi-protein apparatus for motility and cell-cell adhesion in Synechocystis is described and the underlying function of its different elements is detailed. The phototaxis behavior of the cells, in response to homogenous or directional illumination, is reported and its relation to the run and tumble statistics of the cells is emphasized. In Synechocystis suspensions, there may exist a reciprocal interaction between the cell and the carrying fluid. The effects of shear flow on the growth, doubling per day, biomass production, pigments, and lipid production of Synechocystis are reported. Reciprocally, the effects of Synechocystis presence and its motility on the rheological properties of cell suspensions are addressed. This review only takes up the general grounds of cyanobacteria and does not get into the detailed biological aspects per se. Thus, it is substantially more comprehensive in that sense than other reviews that have been published in the last two decades. It is also written not only for the researchers in the field, but for those in physics and engineering, who may find it interesting, useful, and related to their own research.

Seaweeds as a “Palatable” Challenge between Innovation and Sustainability: A Systematic Review of Food Safety

Moderate or severe food insecurity affect 2 billion people worldwide. The four pillars of food security (availability, access, use and stability) are in danger due to the impact of climatic and anthropogenic factors which impact on the food system. Novel foods, like seaweeds, have the potential to increase food yields so that to contribute in preventing or avoiding future global food shortages. The purpose of this systematic review was to assess microbiological, chemical, physical, and allergenic risks associated with seaweed consumption. Four research strings have been used to search for these risks. Preferred Reporting Item for Systematic Reviews and Meta-analysis (PRISMA) guidelines were applied. Finally, 39 articles met the selected criteria. No significant hazards for microbiological, allergenic, and physical risks were detected. Regarding chemical risk, algae can accumulate various heavy metals, especially when harvested in polluted sites. Cultivating seaweeds in a controlled environment allows to avoid this risk. Periodic checks will be necessary on the finished products to monitor heavy metals levels. Since the consumption of algae seems to be on the rise everywhere, it seems to be urgent that food control authorities establish the safety levels to which eating algae does not represent any risk for human health.

Safety of Alternative Proteins: Technological, Environmental and Regulatory Aspects of Cultured Meat, Plant-Based Meat, Insect Protein and Single-Cell Protein

Food security and environmental issues have become global crises that need transformative solutions. As livestock production is becoming less sustainable, alternative sources of proteins are urgently required. These include cultured meat, plant-based meat, insect protein and single-cell protein. Here, we describe the food safety aspects of these novel protein sources, in terms of their technological backgrounds, environmental impacts and the necessary regulatory framework for future mass-scale production. Briefly, cultured meat grown in fetal bovine serum-based media can be exposed to viruses or infectious prion, in addition to other safety risks associated with the use of genetic engineering. Plant-based meat may contain allergens, anti-nutrients and thermally induced carcinogens. Microbiological risks and allergens are the primary concerns associated with insect protein. Single-cell protein sources are divided into microalgae, fungi and bacteria, all of which have specific food safety risks that include toxins, allergens and high ribonucleic acid (RNA) contents. The environmental impacts of these alternative proteins can mainly be attributed to the production of growth substrates or during cultivation. Legislations related to novel food or genetic modification are the relevant regulatory framework to ensure the safety of alternative proteins. Lastly, additional studies on the food safety aspects of alternative proteins are urgently needed for providing relevant food governing authorities with sufficient data to oversee that the technological progress in this area is balanced with robust safety standards.

Effects of rising atmospheric CO2 levels on physiological response of cyanobacteria and cyanobacterial bloom development: A review

Increasing atmospheric CO₂ concentration negatively impacts aquatic ecosystems and may exacerbate the problem of undesirable cyanobacterial bloom development in freshwater ecosystems. Elevated levels of atmospheric CO₂ may increase the levels of dissolved CO₂ in freshwater systems, via air-water exchanges, enhancing primary production in the water and catchments. Although high CO₂ levels improve cyanobacterial growth and increase cyanobacterial biomass, the impacts on their internal physiological processes can be more complex. Here, we have reviewed previous studies to evaluate the physiological responses of cyanobacteria to high concentrations of CO₂. In response to high CO₂ concentrations, the pressures of inorganic carbon absorption are reduced, and carbon concentration mechanisms are downregulated, affecting the intracellular metabolic processes and competitiveness of the cyanobacteria. Nitrogen and phosphorus metabolism and light utilization are closely related to CO₂ assimilation, and these processes are likely to be affected by resource and energy reallocation when CO₂ levels are high. Additionally, the responses of diazotrophic and toxic cyanobacteria to elevated CO₂ levels were specifically reviewed. The responses of diazotrophic cyanobacteria to elevated CO₂ concentrations were found to be inconsistent, probably because of differences in other factors in experimental designs. Toxic cyanobacteria tended to be superior to non-toxic strains at low levels of CO₂; however, the specific effects of microcystin on the regulation require further investigation. Furthermore, the effects of increasing CO₂ levels on cyanobacterial competitiveness in phytoplankton communities and nutrient cycling in aquatic ecosystems were reviewed. High CO₂ concentrations may make cyanobacteria less competitive relative to other algal taxa; however, due to the complexity of natural systems and the specificity of algal species, the dominant positions of the cyanobacteria do not seems to be changed. To better understand cyanobacterial responses to elevated CO₂ levels and help control cyanobacterial bloom developments, this review has identified key areas for future research.

Biofuel Application as a Factor of Sustainable Development Ensuring: The Case of Russia

Diffusion of the biofuels (BF) using is justified by opening up the opportunities for obtaining fuel and energy from previously inaccessible sources and by the existence of energy-deficient regions, in particular in Russia. Works of different scientists on the problems of creating and using BF were the methodological basis of this study. Information on the state and prospects of the development of renewable energy sources in Russian regions was collected from regulatory documents and was obtained by employing a questionnaire survey. For the study of the collected materials, the different methods of comparative analysis, and the methods of expert assessments were used. The results of the Status-Quo analysis of BF production in Russia have shown that the creation of BF performed relatively successfully. However, there are many more perspectives, connected with expanding the utilization of the different raw materials. Also, the analysis of organizational and economic mechanisms applied for production of BF and the obtained data on several organizations-producers allowed for proposing six indexes for the assessment of the BF production effectiveness. It is suggested that BF production in Russia will contribute to the sustainable development of a number of the country’s regions in the near future.

Removal of Microcystin-LR from spiked natural and synthetic waters by anion exchange

Cyanobacterial blooms are becoming a serious challenge across the globe due to changing climate and rainfall patterns as a consequence of human activities. In the present study, the fundamental interactions involved during the removal of Microcystin-LR (MCLR), one of the most commonly occurring cyanobacterial toxins, were investigated by employing strongly basic anion exchange (IX) resins. Several factors including the stoichiometric coefficients, competitive fractions and solute affinities were determined under various concentrations of inorganic ions and natural organic matter. The results indicated that suphates were the most competitive fractions with high affinity (α (affinity coefficient) values ~ 9) followed by nitrates (α ~ 4.7) and NOM fractions (α ~ 4.5, p < 0.05). The Equivalent Background Concentration Mode (EBC), that arises from the Ideal Adsorption Solution Theory (IAST), indicated a competitive fraction of ~2 μeq/L NOM, which approximates to <10% of the initial NOM concentrations, indicating a small fraction of the NOM resulting in the competitive effect. Further, studies with natural surface waters indicated that the MCLR uptake could be modeled using the IAST-EBC model and the IX resin could simultaneously removal of >90% of NOM, inorganic ions and MCLR at resin dosages of 3.6 meq/L or higher.

Long-Term Plastic Greenhouse Cultivation Changes Soil Microbial Community Structures: A Case Study

Plastic greenhouse vegetable cultivation (PGVC) has been widely developed around the world and has resulted in great changes in soil properties and potential contamination by phthalate esters (PAEs). Using high-throughput sequencing, this study investigated the succession and potential factors impacting soil microbial community structures over 20 years of PGVC. The results showed that the pH of soils under PGVC were significantly lower, while the nutrient contents of soils were higher, relative to those of open field soil. The residue concentrations of PAEs in soil under PGVC increased with increasing periods of PGVC. The fungal community diversity, rather than the bacterial community diversity, was significantly reduced in soils under PGVC. However, both the soil bacterial and fungal community structures were changed by long-term PGVC. Among the tested soil physicochemical properties, soil pH and clay were the top two factors affecting the soil bacterial community, while pH and phosphorus (P) mainly affected the soil fungal community structures. No relationship between the changes of microbial communities and PAE residues in soil was observed. This study indicates that the soil acidification and nutrient accumulation under PGVC mainly shifted the changes of soil microbial community structures, which could occur after only 5 years of PGVC.

Patterns of phytoplankton composition in coastal lakes differed by connectivity with the Baltic Sea

The study was aimed to analyse reactions of the major groups of phytoplankton to the mixing regime of fresh and brackish waters in coastal lakes and the associated changes in physicochemical properties of lake waters. For this purpose, on the basis of data collected from 6 coastal lakes located along the southern coast of the Baltic Sea, differing in intensity of intrusion of brackish sea water: limnetic, L (2), limnetic/oligohaline, L/O (2), and oligohaline, O (2), we assessed the associations of major phytoplankton groups with environmental conditions. Statistical analyses revealed that the structure of phytoplankton groups significantly differed among three lakes types, and the variation in these variables was best explained by water temperature, total phosphorus, salinity, PO₄^3-, transparency, dissolved oxygen, and NO₃^-. Relative phytoplankton biomass showed significant differences among the O-L/O-L lake types and formed the following proportion 1:2:3.5. Cyanobacteria constituted a dominant algae group in the lakes, showing the decreasing trend from 86.5% in the L to 69.3% in the O lakes. The indicator value analysis showed that all the studied lakes were dominated by algae preferring freshwater habitats, among which Cyanobacteria and Cryptophyta were indicator groups. Redundancy analysis showed that increasing salinity has got a negative effect on Cyanobacteria and Bacillariophyta biomass, and did not stimulate the development of any algal group. In the coastal lakes we observed 2 distinct stable states (limnetic and oligohaline) as well as transitional phases between them: (1) seaward drift (limnetic-oligohaline) with increasing salinity, and (2) landward drift (oligohaline-limnetic) with decreasing salinity. Algal communities showed the most distinct differences in biomass in limnetic and oligohaline states. These observations suggest that the structure and biomass of phytoplankton may respond gradually on the level of hydrological connectivity, or may respond abruptly creating two alternative stable states: limnetic and oligohaline.

Nanomaterial–microbe cross-talk: physicochemical principles and (patho)biological consequences

NPs’ characteristics impact their spontaneous binding to microbes, which may affect the (patho)biological identity of both NP and microbes.

Integrated identification and quantification of cyanobacterial toxins from Pacific Northwest freshwaters by Liquid Chromatography and High-resolution Mass Spectrometry

The occurrence of harmful algal blooms in nutrient-rich freshwater bodies has increased world-wide, including in the Pacific Northwest. Some cyanobacterial genera have the potential to produce secondary metabolites that are highly toxic to humans, livestock and wildlife. Reliable methods for the detection of cyanobacterial toxins with high specificity and low limits of detection are in high demand. Here we test a relatively new hybrid high resolution accurate mass quadrupole time-of-flight mass spectrometry platform (TripleTOF) for the analysis of cyanobacterial toxins in freshwater samples. We developed a new method that allows the quantitative analysis of four commonly observed microcystin congeners (LR, LA, YR, and RR) and anatoxin-a in a 6-min LC run without solid-phase enrichment. Limits of detection for the microcystin congeners (LR, LA, YR, and RR) and anatoxin-a were <5 ng/L (200-fold lower than the guideline value of 1 μg/L as maximum allowable concentration of MC-LR in drinking water). The method was applied for screening freshwaters in the Pacific Northwest during the bloom and post-bloom periods. The use of high resolution mass spectrometry and concomitant high sensitivity detection of specific fragment ions with high mass accuracy provides an integrated approach for the simultaneous identification and quantification of cyanobacterial toxins. The method is sensitive enough for detecting the toxins in single Microcystis colonies.

Air Pollution and Climate Change Effects on Allergies in the Anthropocene: Abundance, Interaction, and Modification of Allergens and Adjuvants

Air pollution and climate change are potential drivers for the increasing burden of allergic diseases. The molecular mechanisms by which air pollutants and climate parameters may influence allergic diseases, however, are complex and elusive. This article provides an overview of physical, chemical and biological interactions between air pollution, climate change, allergens, adjuvants and the immune system, addressing how these interactions may promote the development of allergies. We reviewed and synthesized key findings from atmospheric, climate, and biomedical research. The current state of knowledge, open questions, and future research perspectives are outlined and discussed. The Anthropocene, as the present era of globally pervasive anthropogenic influence on planet Earth and, thus, on the human environment, is characterized by a strong increase of carbon dioxide, ozone, nitrogen oxides, and combustion- or traffic-related particulate matter in the atmosphere. These environmental factors can enhance the abundance and induce chemical modifications of allergens, increase oxidative stress in the human body, and skew the immune system toward allergic reactions. In particular, air pollutants can act as adjuvants and alter the immunogenicity of allergenic proteins, while climate change affects the atmospheric abundance and human exposure to bioaerosols and aeroallergens. To fully understand and effectively mitigate the adverse effects of air pollution and climate change on allergic diseases, several challenges remain to be resolved. Among these are the identification and quantification of immunochemical reaction pathways involving allergens and adjuvants under relevant environmental and physiological conditions.