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Xu J, Wang Y, Zhang Y, Li Q, Du B, Asitaiken JLHT, Liu Y, Niu D, Fu H, Yuan X. Effect of nitrogen addition on soil net nitrogen mineralization in topsoil and subsoil regulated by soil microbial properties and mineral protection: Evidence from a long-term grassland experiment. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 947:174686. [PMID: 38992360 DOI: 10.1016/j.scitotenv.2024.174686] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/15/2024] [Revised: 06/26/2024] [Accepted: 07/08/2024] [Indexed: 07/13/2024]
Abstract
Soil net nitrogen mineralization (Nmin), a microbial-mediated conversion of organic to inorganic N, is critical for grassland productivity and biogeochemical cycling. Enhanced atmospheric N deposition has been shown to substantially increase both plant and soil N content, leading to a major change in Nmin. However, the mechanisms underlying microbial properties, particularly microbial functional genes, which drive the response of Nmin to elevated N deposition are still being discussed. Besides, it is still uncertain whether the relative importance of plant carbon (C) input, microbial properties, and mineral protection in regulating Nmin under continuous N addition would vary with the soil depth. Here, based on a 13-year multi-level field N addition experiment conducted in a typical grassland on the Loess Plateau, we elucidated how N-induced changes in plant C input, soil physicochemical properties, mineral properties, soil microbial community, and the soil Nmin rate (Rmin)-related functional genes drove the responses of Rmin to N addition in the topsoil and subsoil. The results showed that Rmin increased significantly in both topsoil and subsoil with increasing rates of N addition. Such a response was mainly dominated by the rate of soil nitrification. Structural equation modeling (SEM) revealed that a combination of microbial properties (functional genes and diversity) and mineral properties regulated the response of Rmin to N addition at both soil depths, thus leading to changes in the soil N availability. More importantly, the regulatory impacts of microbial and mineral properties on Rmin were depth-dependent: the influences of microbial properties weakened with soil depth, whereas the effects of mineral protection enhanced with soil depth. Collectively, these results highlight the need to incorporate the effects of differential microbial and mineral properties on Rmin at different soil depths into the Earth system models to better predict soil N cycling under further scenarios of N deposition.
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Affiliation(s)
- Jingrun Xu
- State Key Laboratory of Herbage Improvement and Grassland Agroecosystems, Key Laboratory of Grassland Livestock Industry Innovation, Ministry of Agriculture and Rural Affairs, Engineering Research Center of Grassland Industry, Ministry of Education, College of Pastoral Agriculture Science and Technology, Lanzhou University, Lanzhou 730020, PR China
| | - Ying Wang
- Linze Desert Ecosystem Research Station, Gansu Desert Control Research Institute, Lanzhou 730070, PR China
| | - Yaodan Zhang
- State Key Laboratory of Herbage Improvement and Grassland Agroecosystems, Key Laboratory of Grassland Livestock Industry Innovation, Ministry of Agriculture and Rural Affairs, Engineering Research Center of Grassland Industry, Ministry of Education, College of Pastoral Agriculture Science and Technology, Lanzhou University, Lanzhou 730020, PR China
| | - Qingwei Li
- State Key Laboratory of Herbage Improvement and Grassland Agroecosystems, Key Laboratory of Grassland Livestock Industry Innovation, Ministry of Agriculture and Rural Affairs, Engineering Research Center of Grassland Industry, Ministry of Education, College of Pastoral Agriculture Science and Technology, Lanzhou University, Lanzhou 730020, PR China
| | - Baoming Du
- School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai 200240, PR China
| | - J L H T Asitaiken
- College of Grassland Science, Xinjiang Agricultural University, Urumqi 830052, PR China
| | - Yubing Liu
- State Key Laboratory of Herbage Improvement and Grassland Agroecosystems, Key Laboratory of Grassland Livestock Industry Innovation, Ministry of Agriculture and Rural Affairs, Engineering Research Center of Grassland Industry, Ministry of Education, College of Pastoral Agriculture Science and Technology, Lanzhou University, Lanzhou 730020, PR China
| | - Decao Niu
- State Key Laboratory of Herbage Improvement and Grassland Agroecosystems, Key Laboratory of Grassland Livestock Industry Innovation, Ministry of Agriculture and Rural Affairs, Engineering Research Center of Grassland Industry, Ministry of Education, College of Pastoral Agriculture Science and Technology, Lanzhou University, Lanzhou 730020, PR China
| | - Hua Fu
- State Key Laboratory of Herbage Improvement and Grassland Agroecosystems, Key Laboratory of Grassland Livestock Industry Innovation, Ministry of Agriculture and Rural Affairs, Engineering Research Center of Grassland Industry, Ministry of Education, College of Pastoral Agriculture Science and Technology, Lanzhou University, Lanzhou 730020, PR China
| | - Xiaobo Yuan
- State Key Laboratory of Herbage Improvement and Grassland Agroecosystems, Key Laboratory of Grassland Livestock Industry Innovation, Ministry of Agriculture and Rural Affairs, Engineering Research Center of Grassland Industry, Ministry of Education, College of Pastoral Agriculture Science and Technology, Lanzhou University, Lanzhou 730020, PR China.
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Huang H, He M, Liu X, Ma X, Yang Y, Shen Y, Yang Y, Zhen Y, Wang J, Zhang Y, Wang S, Shan X, Fan W, Guo D, Niu Z. The dynamic features and microbial mechanism of nitrogen transformation for hydrothermal aqueous phase as fertilizer in dryland soil. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2024; 356:120643. [PMID: 38513582 DOI: 10.1016/j.jenvman.2024.120643] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/19/2023] [Revised: 02/19/2024] [Accepted: 03/10/2024] [Indexed: 03/23/2024]
Abstract
Hydrothermal aqueous phase (HAP) contains abundant organics and nutrients, which have potential to partially replace chemical fertilizers for enhancing plant growth and soil quality. However, the underlying reasons for low available nitrogen (N) and high N loss in dryland soil remain unclear. A cultivation experiment was conducted using HAP or urea to supply 160 mg N kg-1 in dryland soil. The dynamic changes of soil organic matters (SOMs), pH, N forms, and N cycling genes were investigated. Results showed that SOMs from HAP stimulated urease activity and ureC, which enhanced ammonification in turn. The high-molecular-weight SOMs relatively increased during 5-30 d and then biodegraded during 30-90 d, which SUV254 changed from 0.51 to 1.47 to 0.29 L-1 m-1. This affected ureC that changed from 5.58 to 5.34 to 5.75 lg copies g-1. Relative to urea, addition HAP enhanced ON mineralization by 8.40 times during 30-90 d due to higher ureC. It decreased NO3-N by 65.35%-77.32% but increased AOB and AOA by 0.25 and 0.90 lg copies g-1 at 5 d and 90 d, respectively. It little affected nirK and increased nosZ by 0.41 lg copies g-1 at 90 d. It increased N loss by 4.59 times. The soil pH for HAP was higher than that for urea after 11 d. The comprehensive effects of high SOMs and pH, including ammonification enhancement and nitrification activity inhibition, were the primary causes of high N loss. The core idea for developing high-efficiency HAP fertilizer is to moderately inhibit ammonification and promote nitrification.
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Affiliation(s)
- Hua Huang
- School of Petroleum Engineering and Environmental Engineering, Yan'an Key Laboratory of Agricultural Solid Waste Resource Utilization, Yan'an Key Laboratory of Environmental Monitoring and Remediation, Yan'an University, Yan'an, 716000, Shaanxi, China; Engineering Research Center of Efficient Exploitation of Oil and Gas Resources and Protection Ecological Environment, Yan'an, 716000, China; Shaanxi Engineering and Technological Research Center for Conversation and Utilization of Regional Biological Resources, Yan'an, 716000, Shaanxi, China
| | - Maoyuan He
- School of Petroleum Engineering and Environmental Engineering, Yan'an Key Laboratory of Agricultural Solid Waste Resource Utilization, Yan'an Key Laboratory of Environmental Monitoring and Remediation, Yan'an University, Yan'an, 716000, Shaanxi, China
| | - Xiaoyan Liu
- School of Petroleum Engineering and Environmental Engineering, Yan'an Key Laboratory of Agricultural Solid Waste Resource Utilization, Yan'an Key Laboratory of Environmental Monitoring and Remediation, Yan'an University, Yan'an, 716000, Shaanxi, China
| | - Xiaoli Ma
- School of Petroleum Engineering and Environmental Engineering, Yan'an Key Laboratory of Agricultural Solid Waste Resource Utilization, Yan'an Key Laboratory of Environmental Monitoring and Remediation, Yan'an University, Yan'an, 716000, Shaanxi, China
| | - Ying Yang
- School of Petroleum Engineering and Environmental Engineering, Yan'an Key Laboratory of Agricultural Solid Waste Resource Utilization, Yan'an Key Laboratory of Environmental Monitoring and Remediation, Yan'an University, Yan'an, 716000, Shaanxi, China
| | - Yuanlei Shen
- School of Petroleum Engineering and Environmental Engineering, Yan'an Key Laboratory of Agricultural Solid Waste Resource Utilization, Yan'an Key Laboratory of Environmental Monitoring and Remediation, Yan'an University, Yan'an, 716000, Shaanxi, China
| | - Yujia Yang
- School of Petroleum Engineering and Environmental Engineering, Yan'an Key Laboratory of Agricultural Solid Waste Resource Utilization, Yan'an Key Laboratory of Environmental Monitoring and Remediation, Yan'an University, Yan'an, 716000, Shaanxi, China
| | - Yanzhong Zhen
- School of Petroleum Engineering and Environmental Engineering, Yan'an Key Laboratory of Agricultural Solid Waste Resource Utilization, Yan'an Key Laboratory of Environmental Monitoring and Remediation, Yan'an University, Yan'an, 716000, Shaanxi, China; Engineering Research Center of Efficient Exploitation of Oil and Gas Resources and Protection Ecological Environment, Yan'an, 716000, China
| | - Jian Wang
- School of Petroleum Engineering and Environmental Engineering, Yan'an Key Laboratory of Agricultural Solid Waste Resource Utilization, Yan'an Key Laboratory of Environmental Monitoring and Remediation, Yan'an University, Yan'an, 716000, Shaanxi, China; Engineering Research Center of Efficient Exploitation of Oil and Gas Resources and Protection Ecological Environment, Yan'an, 716000, China
| | - Yongtao Zhang
- School of Petroleum Engineering and Environmental Engineering, Yan'an Key Laboratory of Agricultural Solid Waste Resource Utilization, Yan'an Key Laboratory of Environmental Monitoring and Remediation, Yan'an University, Yan'an, 716000, Shaanxi, China; Engineering Research Center of Efficient Exploitation of Oil and Gas Resources and Protection Ecological Environment, Yan'an, 716000, China
| | - Shuai Wang
- School of Petroleum Engineering and Environmental Engineering, Yan'an Key Laboratory of Agricultural Solid Waste Resource Utilization, Yan'an Key Laboratory of Environmental Monitoring and Remediation, Yan'an University, Yan'an, 716000, Shaanxi, China; Engineering Research Center of Efficient Exploitation of Oil and Gas Resources and Protection Ecological Environment, Yan'an, 716000, China
| | - Xianying Shan
- School of Petroleum Engineering and Environmental Engineering, Yan'an Key Laboratory of Agricultural Solid Waste Resource Utilization, Yan'an Key Laboratory of Environmental Monitoring and Remediation, Yan'an University, Yan'an, 716000, Shaanxi, China
| | - Wenyan Fan
- School of Petroleum Engineering and Environmental Engineering, Yan'an Key Laboratory of Agricultural Solid Waste Resource Utilization, Yan'an Key Laboratory of Environmental Monitoring and Remediation, Yan'an University, Yan'an, 716000, Shaanxi, China
| | - Di Guo
- School of Petroleum Engineering and Environmental Engineering, Yan'an Key Laboratory of Agricultural Solid Waste Resource Utilization, Yan'an Key Laboratory of Environmental Monitoring and Remediation, Yan'an University, Yan'an, 716000, Shaanxi, China; Engineering Research Center of Efficient Exploitation of Oil and Gas Resources and Protection Ecological Environment, Yan'an, 716000, China
| | - Zhirui Niu
- School of Petroleum Engineering and Environmental Engineering, Yan'an Key Laboratory of Agricultural Solid Waste Resource Utilization, Yan'an Key Laboratory of Environmental Monitoring and Remediation, Yan'an University, Yan'an, 716000, Shaanxi, China; Engineering Research Center of Efficient Exploitation of Oil and Gas Resources and Protection Ecological Environment, Yan'an, 716000, China; Shaanxi Engineering and Technological Research Center for Conversation and Utilization of Regional Biological Resources, Yan'an, 716000, Shaanxi, China.
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Wang X, Chi Y, Song S. Important soil microbiota's effects on plants and soils: a comprehensive 30-year systematic literature review. Front Microbiol 2024; 15:1347745. [PMID: 38591030 PMCID: PMC10999704 DOI: 10.3389/fmicb.2024.1347745] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2023] [Accepted: 03/11/2024] [Indexed: 04/10/2024] Open
Abstract
Clarifying the relationship between soil microorganisms and the plant-soil system is crucial for encouraging the sustainable development of ecosystems, as soil microorganisms serve a variety of functional roles in the plant-soil system. In this work, the influence mechanisms of significant soil microbial groups on the plant-soil system and their applications in environmental remediation over the previous 30 years were reviewed using a systematic literature review (SLR) methodology. The findings demonstrated that: (1) There has been a general upward trend in the number of publications on significant microorganisms, including bacteria, fungi, and archaea. (2) Bacteria and fungi influence soil development and plant growth through organic matter decomposition, nitrogen, phosphorus, and potassium element dissolution, symbiotic relationships, plant growth hormone production, pathogen inhibition, and plant resistance induction. Archaea aid in the growth of plants by breaking down low-molecular-weight organic matter, participating in element cycles, producing plant growth hormones, and suppressing infections. (3) Microorganism principles are utilized in soil remediation, biofertilizer production, denitrification, and phosphorus removal, effectively reducing environmental pollution, preventing soil pathogen invasion, protecting vegetation health, and promoting plant growth. The three important microbial groups collectively regulate the plant-soil ecosystem and help maintain its relative stability. This work systematically summarizes the principles of important microbial groups influence plant-soil systems, providing a theoretical reference for how to control soil microbes in order to restore damaged ecosystems and enhance ecosystem resilience in the future.
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Affiliation(s)
| | - Yongkuan Chi
- School of Karst Science, State Engineering Technology Institute for Karst Desertification Control, Guizhou Normal University, Guiyang, China
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Qiu L, Gou X, Kong Y, Tu F, Peng X, Xu L, Zhou S, Huang C, Chen Y, Liu L, Tu L. Nitrogen addition stimulates N 2O emissions via changes in denitrification community composition in a subtropical nitrogen-rich forest. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2023; 348:119274. [PMID: 37890399 DOI: 10.1016/j.jenvman.2023.119274] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/29/2023] [Accepted: 10/04/2023] [Indexed: 10/29/2023]
Abstract
Microbially driven nitrification and denitrification play important roles in regulating soil N availability and N2O emissions. However, how the composition of nitrifying and denitrifying prokaryotic communities respond to long-term N additions and regulate soil N2O emissions in subtropical forests remains unclear. Seven years of field experiment which included three N treatments (+0, +50, +150 kg N ha-1 yr-1; CK, LN, HN) was conducted in a subtropical forest. Soil available nutrients, N2O emissions, net N mineralization, denitrification potential and enzyme activities, and the composition and diversity of nitrifying and denitrifying communities were measured. Soil N2O emissions from the LN and HN treatments increased by 42.37% and 243.32%, respectively, as compared to the CK. Nitrogen addition significantly inhibited nitrification (N mineralization) and significantly increased denitrification potentials and enzymes. Nitrification and denitrification abundances (except nirK) were significantly lower in the HN, than CK treatment and were not significantly correlated with N2O emissions. Nitrogen addition significantly increased nirK abundance while maintaining the positive effects of denitrification and N2O emissions to N deposition, challenging the conventional wisdom that long-term N addition reduces N2O emissions by inhibiting microbial growth. Structural equation modeling showed that the composition, diversity, and abundance of nirS- and nirK-type denitrifying prokaryotic communities had direct effects on N2O emissions. Mechanistic investigations have revealed that denitrifier keystone taxa transitioned from N2O-reducing (complete denitrification) to N2O-producing (incomplete denitrification) with increasing N addition, increasing structural complexity and diversity of the denitrifier co-occurrence network. These results significantly advance current understanding of the relationship between denitrifying community composition and N2O emissions, and highlight the importance of incorporating denitrifying community dynamics and soil environmental factors together in models to accurately predict key ecosystem processes under global change.
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Affiliation(s)
- Lingjun Qiu
- National Forestry and Grassland Administration Key Laboratory of Forest Resources Conservation and Ecological Safety on the Upper Reaches of the Yangtze River, Forestry Ecological Engineering in the Upper Reaches of the Yangtze River Key Laboratory of Sichuan Province, College of Forestry, Sichuan Agricultural University, Chengdu, Sichuan, 611130, China
| | - Xin Gou
- National Forestry and Grassland Administration Key Laboratory of Forest Resources Conservation and Ecological Safety on the Upper Reaches of the Yangtze River, Forestry Ecological Engineering in the Upper Reaches of the Yangtze River Key Laboratory of Sichuan Province, College of Forestry, Sichuan Agricultural University, Chengdu, Sichuan, 611130, China
| | - Yuemei Kong
- National Forestry and Grassland Administration Key Laboratory of Forest Resources Conservation and Ecological Safety on the Upper Reaches of the Yangtze River, Forestry Ecological Engineering in the Upper Reaches of the Yangtze River Key Laboratory of Sichuan Province, College of Forestry, Sichuan Agricultural University, Chengdu, Sichuan, 611130, China
| | - Fangyang Tu
- National Forestry and Grassland Administration Key Laboratory of Forest Resources Conservation and Ecological Safety on the Upper Reaches of the Yangtze River, Forestry Ecological Engineering in the Upper Reaches of the Yangtze River Key Laboratory of Sichuan Province, College of Forestry, Sichuan Agricultural University, Chengdu, Sichuan, 611130, China
| | - Xia Peng
- National Forestry and Grassland Administration Key Laboratory of Forest Resources Conservation and Ecological Safety on the Upper Reaches of the Yangtze River, Forestry Ecological Engineering in the Upper Reaches of the Yangtze River Key Laboratory of Sichuan Province, College of Forestry, Sichuan Agricultural University, Chengdu, Sichuan, 611130, China
| | - Lin Xu
- National Forestry and Grassland Administration Key Laboratory of Forest Resources Conservation and Ecological Safety on the Upper Reaches of the Yangtze River, Forestry Ecological Engineering in the Upper Reaches of the Yangtze River Key Laboratory of Sichuan Province, College of Forestry, Sichuan Agricultural University, Chengdu, Sichuan, 611130, China
| | - Shixing Zhou
- National Forestry and Grassland Administration Key Laboratory of Forest Resources Conservation and Ecological Safety on the Upper Reaches of the Yangtze River, Forestry Ecological Engineering in the Upper Reaches of the Yangtze River Key Laboratory of Sichuan Province, College of Forestry, Sichuan Agricultural University, Chengdu, Sichuan, 611130, China
| | - Congde Huang
- National Forestry and Grassland Administration Key Laboratory of Forest Resources Conservation and Ecological Safety on the Upper Reaches of the Yangtze River, Forestry Ecological Engineering in the Upper Reaches of the Yangtze River Key Laboratory of Sichuan Province, College of Forestry, Sichuan Agricultural University, Chengdu, Sichuan, 611130, China
| | - Yuqin Chen
- National Forestry and Grassland Administration Key Laboratory of Forest Resources Conservation and Ecological Safety on the Upper Reaches of the Yangtze River, Forestry Ecological Engineering in the Upper Reaches of the Yangtze River Key Laboratory of Sichuan Province, College of Forestry, Sichuan Agricultural University, Chengdu, Sichuan, 611130, China
| | - Li Liu
- Maize Research Institute, Sichuan Agricultural University, Chengdu, Sichuan, 611130, China
| | - Lihua Tu
- National Forestry and Grassland Administration Key Laboratory of Forest Resources Conservation and Ecological Safety on the Upper Reaches of the Yangtze River, Forestry Ecological Engineering in the Upper Reaches of the Yangtze River Key Laboratory of Sichuan Province, College of Forestry, Sichuan Agricultural University, Chengdu, Sichuan, 611130, China.
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Shang S, Song M, Wang C, Dou X, Wang J, Liu F, Zhu C, Wang S. Decrease of nitrogen cycle gene abundance and promotion of soil microbial-N saturation restrain increases in N 2O emissions in a temperate forest with long-term nitrogen addition. CHEMOSPHERE 2023; 338:139378. [PMID: 37419152 DOI: 10.1016/j.chemosphere.2023.139378] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/04/2023] [Revised: 06/26/2023] [Accepted: 06/28/2023] [Indexed: 07/09/2023]
Abstract
Increases in soil available nitrogen (N) influence N-cycle gene abundances and emission of nitrous oxide (N2O), which is primarily due to N-induced soil acidification in forest. Moreover, the extent of microbial-N saturation could control microbial activity and N2O emission. The contributions of N-induced alterations of microbial-N saturation and N-cycle gene abundances to N2O emission have rarely been quantified. Here, the mechanism underlying N2O emission under N additions (three chemical forms of N, i.e., NO3--N, NH4+-N and NH4NO3-N, and each at two rates, 50 and 150 kg N ha-1 year-1, respectively) spanning 2011-2021 was investigated in a temperate forest in Beijing. Results showed N2O emissions increased at both low and high N rates of all the three forms compared with control during the whole experiment. However, N2O emissions were lower in high rate of NH4NO3-N and NH4+-N treatments than the corresponding low N rates in the recent three years. Effects of N on microbial-N saturation and abundances of N-cycle genes were dependent on the N rate and form as well as experimental time. Specifically, negative effects of N on N-cycle gene abundances and positive effects of N on microbial-N saturation were demonstrated in high N rate treatments, particularly with NH4+ addition during 2019-2021. Such effects were associated with soil acidification. A hump-backed trend between microbial-N saturation and N2O emissions was observed, suggesting N2O emissions decreased with increase of the microbial-N saturation. Furthermore, N-induced decreases in N-cycle gene abundances restrained N2O emissions. In particular, the nitrification process, dominated by ammonia-oxidize archaea, is critical to determination of N2O emissions in response to the N addition in the temperate forest. We confirmed N addition promoted soil microbial-N saturation and reduced N-cycle gene abundances, which restrained the continuous increase in N2O emissions. It is important for understanding the forest-N-microbe nexus under climate change.
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Affiliation(s)
- Shuaishuai Shang
- College of Environmental Science and Engineering, Beijing Forestry University, Beijing, 100083, China.
| | - Minghua Song
- Key Laboratory of Ecosystem Network Observation and Modeling, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, A11, Datun Road, Chaoyang District, Beijing, 100101, China
| | - Chunmei Wang
- College of Environmental Science and Engineering, Beijing Forestry University, Beijing, 100083, China.
| | - Xiaomin Dou
- College of Environmental Science and Engineering, Beijing Forestry University, Beijing, 100083, China
| | - Jiaxin Wang
- College of Environmental Science and Engineering, Beijing Forestry University, Beijing, 100083, China
| | - Fangfang Liu
- College of Environmental Science and Engineering, Beijing Forestry University, Beijing, 100083, China
| | - Chenying Zhu
- College of Environmental Science and Engineering, Beijing Forestry University, Beijing, 100083, China
| | - Shiqi Wang
- College of Environmental Science and Engineering, Beijing Forestry University, Beijing, 100083, China
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Dou Y, Wen M, Yang C, Zhao F, Ren C, Zhang N, Liang Y, Wang J. Effects of straw and plastic film mulching on microbial functional genes involved in soil nitrogen cycling. Front Microbiol 2023; 14:1205088. [PMID: 37497548 PMCID: PMC10367349 DOI: 10.3389/fmicb.2023.1205088] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/13/2023] [Accepted: 06/20/2023] [Indexed: 07/28/2023] Open
Abstract
Introduction Microorganisms regulate soil nitrogen (N) cycling in cropping systems. However, how soil microbial functional genes involved in soil N cycling respond to mulching practices is not well known. Methods We collected soil samples from a spring maize field mulched with crop straw (SM) and plastic film (FM) for 10-year and with no mulching (CK) in the Loess Plateau. Microbial functional genes involved in soil N cycling were quantified using metagenomic sequencing. We collected soil samples from a spring maize field mulched with crop straw (SM) and plastic film (FM) for 10-year and with no mulching (CK) in the Loess Plateau. Microbial functional genes involved in soil N cycling were quantified using metagenomic sequencing. Results Compared to that in CK, the total abundance of genes involved in soil N cycling increased in SM but had no significant changes in FM. Specifically, SM increased the abundances of functional genes that involved in dissimilatory nitrate reduction to ammonium (nirB, napA, and nrfA), while FM decreased the abundances of functional genes that involved in ammonification (ureC and ureA) in comparison with CK. Other genes involved in assimilatory nitrate reduction, denitrification, and ammonia assimilation, however, were not significantly changed with mulching practices. The nirB and napA were derived from Proteobacteria (mainly Sorangium), and the ureC was derived from Actinobacteria (mainly Streptomyces). Mental test showed that the abundance of functional genes that involved in dissimilatory nitrate reduction was positively correlated with the contents of soil microbial biomass N, potential N mineralization, particulate organic N, and C fractions, while ammonification related gene abundance was positively correlated with soil pH, microbial biomass C and N, and mineral N contents. Discussion Overall, this study showed that SM could improve soil N availability and promote the soil N cycling by increasing the abundance of functional genes that involved in DNRA, while FM reduced the abundance of functional genes that involved in ammonification and inhibited soil N cycling.
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Affiliation(s)
- Ying Dou
- Shaanxi Key Laboratory of Earth Surface System and Environmental Carrying Capacity, College of Urban and Environmental Sciences, Northwest University, Xi’an, China
| | - Mengmeng Wen
- Shaanxi Key Laboratory of Earth Surface System and Environmental Carrying Capacity, College of Urban and Environmental Sciences, Northwest University, Xi’an, China
| | - Caidi Yang
- Shaanxi Key Laboratory of Earth Surface System and Environmental Carrying Capacity, College of Urban and Environmental Sciences, Northwest University, Xi’an, China
| | - Fazhu Zhao
- Shaanxi Key Laboratory of Earth Surface System and Environmental Carrying Capacity, College of Urban and Environmental Sciences, Northwest University, Xi’an, China
| | - Chengjie Ren
- College of Agronomy, Northwest A&F University, Yangling, China
| | - Nannan Zhang
- Shaanxi Key Laboratory of Earth Surface System and Environmental Carrying Capacity, College of Urban and Environmental Sciences, Northwest University, Xi’an, China
| | - Yinyan Liang
- Shaanxi Key Laboratory of Earth Surface System and Environmental Carrying Capacity, College of Urban and Environmental Sciences, Northwest University, Xi’an, China
| | - Jun Wang
- Shaanxi Key Laboratory of Earth Surface System and Environmental Carrying Capacity, College of Urban and Environmental Sciences, Northwest University, Xi’an, China
- State Key Laboratory of Soil Erosion and Dryland Farming on the Loess Plateau, Institute of Soil and Water Conservation, Chinese Academy of Sciences and Ministry of Water Resources, Yangling, China
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Yang X, Tang S, Ni K, Shi Y, Yi X, Ma Q, Cai Y, Ma L, Ruan J. Long-term nitrogen addition increases denitrification potential and functional gene abundance and changes denitrifying communities in acidic tea plantation soil. ENVIRONMENTAL RESEARCH 2023; 216:114679. [PMID: 36326541 DOI: 10.1016/j.envres.2022.114679] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/03/2022] [Revised: 10/03/2022] [Accepted: 10/24/2022] [Indexed: 06/16/2023]
Abstract
The response of soil denitrification to nitrogen (N) addition in the acidic and perennial agriculture systems and its underlying mechanisms remain poorly understood. Therefore, a long-term (12 years) field trial was conducted to explore the effects of different N application rates on the soil denitrification potential (DP), functional genes, and denitrifying microbial communities of a tea plantation. The study found that N application to the soil significantly increased the DP and the absolute abundance of denitrifying genes, such as narG, nirK, norB, and nosZ. The diversity of denitrifying communities (genus level) significantly decreased with increasing N rates. Moreover, the denitrifying communities composition significantly differed among the soils with different rates of N fertilization. Further variance partitioning analysis (VPA) revealed that the soil (39.04%) and pruned litter (32.53%) properties largely contributed to the variation in the denitrifying communities. Dissolved organic carbon (DOC) and soil pH, pruned litter's total crude fiber (TCF) content and total polyphenols to total N ratio (TP/TN), and narG and nirK abundance significantly (VIP >1.0) influenced the DP. Finally, partial least squares path modeling (PLS-PM) revealed that N addition indirectly affected the DP by changing specific soil and pruned litter properties and functional gene abundance. Thus, the findings suggest that tea plantation is a major source of N2O emissions that significantly enhance under N application and provide theoretical support for N fertilizer management in an acidic tea plantation system.
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Affiliation(s)
- Xiangde Yang
- Key Laboratory of Tea Quality and Safety Control, Ministry of Agriculture and Rural Affairs, Tea Research Institute, Chinese Academy of Agricultural Sciences, Hangzhou 310008, China
| | - Sheng Tang
- Ministry of Education Key Lab of Environmental Remediation and Ecosystem Health, College of Environmental and Resource Sciences, Zhejiang University, Hangzhou 310058, China
| | - Kang Ni
- Key Laboratory of Tea Quality and Safety Control, Ministry of Agriculture and Rural Affairs, Tea Research Institute, Chinese Academy of Agricultural Sciences, Hangzhou 310008, China
| | - Yuanzhi Shi
- Key Laboratory of Tea Quality and Safety Control, Ministry of Agriculture and Rural Affairs, Tea Research Institute, Chinese Academy of Agricultural Sciences, Hangzhou 310008, China
| | - Xiaoyun Yi
- Key Laboratory of Tea Quality and Safety Control, Ministry of Agriculture and Rural Affairs, Tea Research Institute, Chinese Academy of Agricultural Sciences, Hangzhou 310008, China
| | - Qingxu Ma
- Ministry of Education Key Lab of Environmental Remediation and Ecosystem Health, College of Environmental and Resource Sciences, Zhejiang University, Hangzhou 310058, China
| | - Yanjiang Cai
- State Key Laboratory of Subtropical Silviculture, Zhejiang A&F University, Hangzhou 311300, China
| | - Lifeng Ma
- Key Laboratory of Tea Quality and Safety Control, Ministry of Agriculture and Rural Affairs, Tea Research Institute, Chinese Academy of Agricultural Sciences, Hangzhou 310008, China.
| | - Jianyun Ruan
- Key Laboratory of Tea Quality and Safety Control, Ministry of Agriculture and Rural Affairs, Tea Research Institute, Chinese Academy of Agricultural Sciences, Hangzhou 310008, China.
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Ye J, Wang Y, Kang J, Chen Y, Hong L, Li M, Jia Y, Wang Y, Jia X, Wu Z, Wang H. Effects of Long-Term Use of Organic Fertilizer with Different Dosages on Soil Improvement, Nitrogen Transformation, Tea Yield and Quality in Acidified Tea Plantations. PLANTS (BASEL, SWITZERLAND) 2022; 12:plants12010122. [PMID: 36616251 PMCID: PMC9824488 DOI: 10.3390/plants12010122] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/17/2022] [Revised: 12/22/2022] [Accepted: 12/23/2022] [Indexed: 05/27/2023]
Abstract
In this study, sheep manure fertilizers with different dosages were used for five consecutive years to treat acidified tea plantation soils, and the effects of sheep manure fertilizer on soil pH value, nitrogen transformation, and tea yield and quality were analyzed. The results showed that soil pH value showed an increasing trend after a continuous use of sheep manure fertilizer from 2018 to 2022. After the use of low dosage of sheep manure fertilizer (6 t/hm2-15 t/hm2), tea yield, the content of tea quality indicators (tea polyphenols, theanine, amino acid, and caffeine) and soil ammonium nitrogen content, ammoniating bacteria number, ammoniating intensity, urease activity and protease activity showed increasing trends and were significantly and positively correlated to soil pH value, while the related indexes showed increasing and then decreasing trends after the use of high dosage of sheep manure fertilizer (18 t/hm2). Secondly, the nitrate nitrogen content, nitrifying bacteria number, nitrifying intensity, nitrate reductase activity, and nitrite reductase activity showed decreasing trends after the use of low dosage of sheep manure fertilizer and showed significant negative correlations with soil pH value, while the related indexes showed decreasing trends after the use of high dosage of sheep manure and then increased. The results of principal component and interaction analysis showed that the effects of sheep manure fertilizers with different dosages on tea yield and quality were mainly based on the transformation ability of ammonium nitrogen and nitrate nitrogen in the soil, and the strong transformation ability of ammonium nitrogen and the high ammonium nitrogen content in the soil were conducive to the improvement of tea yield and quality, and vice versa. The results of topsis comprehensive evaluation and analysis showed that the most influential effect on the fertilization effect was the ammonium nitrogen content in the soil and long-term treatment with 15 t/hm2 of sheep manure fertilizer had the highest proximity to the best fertilization effect. This study provided an important practical basis for the remediation and fertilizer management in acidified tea plantation soils.
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Affiliation(s)
- Jianghua Ye
- College of Tea and Food, Wuyi University, Wuyishan 354300, China
- College of Life Science, Fujian Agriculture and Forestry University, Fuzhou 350002, China
| | - Yuhua Wang
- College of Life Science, Fujian Agriculture and Forestry University, Fuzhou 350002, China
| | - Jiaqian Kang
- College of Life Science, Longyan University, Longyan 364012, China
| | - Yiling Chen
- College of Life Science, Longyan University, Longyan 364012, China
| | - Lei Hong
- College of Life Science, Longyan University, Longyan 364012, China
| | - Mingzhe Li
- College of Life Science, Longyan University, Longyan 364012, China
| | - Yun Jia
- College of Life Science, Longyan University, Longyan 364012, China
| | - Yuchao Wang
- College of Life Science, Fujian Agriculture and Forestry University, Fuzhou 350002, China
| | - Xiaoli Jia
- College of Tea and Food, Wuyi University, Wuyishan 354300, China
| | - Zeyan Wu
- College of Life Science, Fujian Agriculture and Forestry University, Fuzhou 350002, China
| | - Haibin Wang
- College of Life Science, Fujian Agriculture and Forestry University, Fuzhou 350002, China
- College of Life Science, Longyan University, Longyan 364012, China
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9
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Li X, Yao S, Wang Z, Jiang X, Song Y, Chang SX. Polyethylene microplastic and biochar interactively affect the global warming potential of soil greenhouse gas emissions. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2022; 315:120433. [PMID: 36243191 DOI: 10.1016/j.envpol.2022.120433] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/26/2022] [Revised: 10/06/2022] [Accepted: 10/10/2022] [Indexed: 06/16/2023]
Abstract
Emerging microplastic pollution and biochar application result in their coexistence in the soil. In this study, a polyethylene microplastic, a straw biochar, and a manure biochar were applied alone or in combination to an agricultural soil to explore their interactive effects on microbial biomass carbon and nitrogen, bacterial community composition, structure and function, and the resultant greenhouse gas emissions in a 45-day laboratory incubation. At the end of incubation, the co-application of microplastic and biochar suppressed the global warming potential of cumulative greenhouse gas emissions compared with the sum of their application alone. Specifically, coexisting with microplastics increased N2O emissions by 37.5% but decreased CH4 emissions by 35.8% in the straw biochar added soil, and decreased N2O, CO2 and CH4 emissions by 24.8, 6.2, and 65.2%, respectively, in the manure biochar added soil. A correlation network analysis illustrated that the increased global warming potential was related to the changed bacterial function and microbial biomass carbon and nitrogen in the treatments with straw biochar and/or polyethylene microplastic added, and by the changed bacterial community structure and function in the treatments with manure biochar and/or polyethylene microplastic added. Bacterial functions associated with tricarboxylic acid cycle contributed to CO2 emissions. Bacterial functions associated with the nitrogen cycle such as nosZ and AOBamoABC were negatively and positively correlated with N2O emissions, respectively. The interaction between different types of microplastics and soil amendments and the resultant effects on ecosystem function deserve further research.
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Affiliation(s)
- Xiaona Li
- Institute of Environmental Processes and Pollution Control, and School of Environmental and Civil Engineering, Jiangnan University, Wuxi, 214122, China; CAS Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing, 210008, China; Department of Renewable Resources, University of Alberta, Edmonton, Alberta, T6G 2E3, Canada; University of the Chinese Academy of Sciences, Beijing, 100049, China
| | - Shi Yao
- CAS Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing, 210008, China; University of the Chinese Academy of Sciences, Beijing, 100049, China
| | - Zhenyu Wang
- Institute of Environmental Processes and Pollution Control, and School of Environmental and Civil Engineering, Jiangnan University, Wuxi, 214122, China
| | - Xin Jiang
- CAS Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing, 210008, China; University of the Chinese Academy of Sciences, Beijing, 100049, China
| | - Yang Song
- CAS Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing, 210008, China; University of the Chinese Academy of Sciences, Beijing, 100049, China.
| | - Scott X Chang
- Department of Renewable Resources, University of Alberta, Edmonton, Alberta, T6G 2E3, Canada
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10
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Lin S, Liu Z, Wang Y, Li J, Wang G, Ye J, Wang H, He H. Soil metagenomic analysis on changes of functional genes and microorganisms involved in nitrogen-cycle processes of acidified tea soils. FRONTIERS IN PLANT SCIENCE 2022; 13:998178. [PMID: 36311106 PMCID: PMC9614370 DOI: 10.3389/fpls.2022.998178] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/19/2022] [Accepted: 09/26/2022] [Indexed: 06/01/2023]
Abstract
Nitrogen (N) is the first essential nutrient for tea growth. However, the effect of soil acidification on soil N cycle and N forms in tea plantation are unclear. In this study, the nitrogen contents, soil enzyme activity and N mineralization rate in acidified soil of tea plantation were measured. Moreover, the effects of soil acidification on N cycling functional genes and functional microorganisms were explored by soil metagenomics. The results showed that the NH4 +-N, available N and net N mineralization rate in the acidified tea soil decreased significantly, while the NO3 --N content increased significantly. The activities of sucrase, protease, catalase and polyphenol oxidase in the acidified tea soil decreased significantly. The abundance of genes related to ammonification, dissimilatory N reduction, nitrification and denitrification pathway in the acidified tea soil increased significantly, but the abundance of functional genes related to glutamate synthesis and assimilatory N reduction pathway were opposite. In addition, the abundance of Proteobacteria, Actinobacteria, Chloroflexi, Nitrospirae, Actinomadura, Nitrospira etc. microorganisms related to nitrification, denitrification and pathogenic effect increased significantly in the acidified tea soil. The correlation results showed that soil pH and N forms were correlated with soil enzyme activity, N cycling function genes and microbial changes. In conclusion, soil acidification results in significant changes in enzyme activity, gene abundance and microorganism involved in various N cycle processes in acidified tea soil, which leads to imbalance of soil N form ratio and is not conducive to N transformation and absorption of tea trees.
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Affiliation(s)
- Shunxian Lin
- Key Laboratory of Agroecological Processing and Safety Monitoring of Fujian Province, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Zhijun Liu
- Key Laboratory of Agroecological Processing and Safety Monitoring of Fujian Province, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Yuchao Wang
- Key Laboratory of Agroecological Processing and Safety Monitoring of Fujian Province, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Jiayu Li
- Key Laboratory of Agroecological Processing and Safety Monitoring of Fujian Province, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Gege Wang
- Key Laboratory of Agroecological Processing and Safety Monitoring of Fujian Province, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Jianghua Ye
- Key Laboratory of Agroecological Processing and Safety Monitoring of Fujian Province, Fujian Agriculture and Forestry University, Fuzhou, China
- College of Tea and Food Science, Wuyi University, Wuyishan, China
| | - Haibin Wang
- Key Laboratory of Agroecological Processing and Safety Monitoring of Fujian Province, Fujian Agriculture and Forestry University, Fuzhou, China
- College of Life Sciences, Longyan University, Longyan, China
| | - Haibin He
- Key Laboratory of Agroecological Processing and Safety Monitoring of Fujian Province, Fujian Agriculture and Forestry University, Fuzhou, China
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11
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Liu C, Li B, Chen X, Dong Y, Lin H. Insight into soilless revegetation of oligotrophic and heavy metal contaminated gold tailing pond by metagenomic analysis. JOURNAL OF HAZARDOUS MATERIALS 2022; 435:128881. [PMID: 35489315 DOI: 10.1016/j.jhazmat.2022.128881] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/08/2022] [Revised: 04/04/2022] [Accepted: 04/05/2022] [Indexed: 06/14/2023]
Abstract
Soilless revegetation is an efficient way for gold tailing remediation, and micro-ecological environments in plant rhizosphere are important for vegetation establishment and pollution removal. In the present study, a field experiment of soilless revegetation has been carried out in a gold tailings pond, and the key genera and functional genes in the plant rhizosphere of gold mine tailings were revealed by metagenomics analysis. Soilless revegetation significantly decreased rhizosphere tailing pH from 8.54 to 7.43-7.87, reduced heavy metal (HM) concentration by 29.81-44.02% and enhanced the nutrient content by 50.30-169.50% averagely. Such improvements were strongly and closely correlated to microbial community and functional gene composition variation. The relative abundance of ecologically beneficial genus such as Actinobacteria (increased 9.7-18.8%) and functional genes involved in carbon, nitrogen and phosphorus cycling such as pyruvate metabolism (relatively increased 8.7-15.0%), assimilatory (increased to 1.44-2.08 times), phosphate ester mineralization (increased to 1.12-1.29 times) and phosphate transportation (increased to 1.28-1.85 times) were significantly increased. Moreover, the relative abundance of most As and Zn resistance genes were reduced, which may relate to the decrease of As and Zn concentration in the rhizosphere tailings. These results revealed the correlation among HM concentrations, microbial composition and functional genes, and provided clear strategies for improving gold mine tailing ecological restoration efficiency.
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Affiliation(s)
- Chenjing Liu
- School of Energy and Environmental Engineering, University of Science and Technology Beijing, Beijing 100083, China; Beijing Key Laboratory on Resource-Oriented Treatment of Industrial Pollutants, Beijing 100083, China
| | - Bing Li
- School of Energy and Environmental Engineering, University of Science and Technology Beijing, Beijing 100083, China; Beijing Key Laboratory on Resource-Oriented Treatment of Industrial Pollutants, Beijing 100083, China.
| | - Xu Chen
- School of Energy and Environmental Engineering, University of Science and Technology Beijing, Beijing 100083, China
| | - Yingbo Dong
- School of Energy and Environmental Engineering, University of Science and Technology Beijing, Beijing 100083, China; Beijing Key Laboratory on Resource-Oriented Treatment of Industrial Pollutants, Beijing 100083, China
| | - Hai Lin
- School of Energy and Environmental Engineering, University of Science and Technology Beijing, Beijing 100083, China; Beijing Key Laboratory on Resource-Oriented Treatment of Industrial Pollutants, Beijing 100083, China.
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12
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Chen W, Su F, Nie Y, Zhong B, Zheng Y, Mo J, Xiong B, Lu X. Divergent responses of soil microbial functional groups to long-term high nitrogen presence in the tropical forests. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022; 821:153251. [PMID: 35051470 DOI: 10.1016/j.scitotenv.2022.153251] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/31/2021] [Revised: 01/04/2022] [Accepted: 01/14/2022] [Indexed: 06/14/2023]
Abstract
A massive rise in atmospheric nitrogen deposition (ND) has threatened ecosystem health through accelerating soil nitrogen (N) cycling rates. While soil microbes serve a crucial function in soil N transformation, it remains poorly understood on how excess ND affects microbial functional populations regulating soil N transformation in tropical forests. To address this gap, we conducted 13-year N (as NH4NO3) addition experiments in one N-rich tropical primary forest (PF) and two N-poor tropical reforested forests (rehabilitated and disturbed) in South China. Based on our data, 13-year N introduction markedly enhanced soil N2O generation in all forests, regardless of soil N status, but microbial functional groups showed divergent responses to excess N addition among the studied forests. In the PF, long-term N introduction markedly decreased presence of bacterial 16S rRNA gene, nitrifier (amoA) and denitrifier genes (nirK, nirS and nosZ) and bacteria/fungi ratio, which could be attributed to the decreases in soil pH, dissolved organic carbon to N ratio and understory plant richness. In the two reforested forests, however, long-term N introduction generally did neither alter soil properties nor the abundance of most microbial groups. We further found that the elevated N2O generation was related to the increased soil N availability and decreased nosZ abundance, and the PF has the highest N2O generation than the other two forests. Overall, our data indicates that the baseline soil N status may dominate response of microbial functional groups to ND in tropical forests, and N-rich forests are more responsive to excess N inputs, compared to those with low-N status. Forests with high soil N status can produce more N2O than those with low-N status. With the spread of elevated ND from temperate to tropical zones, tropical forests should merit more attention because ecosystem N saturation may be common and high N2O emission will occur.
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Affiliation(s)
- Weibin Chen
- Key Laboratory of Vegetation Restoration and Management of Degraded Ecosystems, and Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou 510650, China
| | - Fanglong Su
- Key Laboratory of Vegetation Restoration and Management of Degraded Ecosystems, and Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou 510650, China
| | - Yanxia Nie
- Key Laboratory of Vegetation Restoration and Management of Degraded Ecosystems, and Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou 510650, China
| | - Buqing Zhong
- Key Laboratory of Vegetation Restoration and Management of Degraded Ecosystems, and Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou 510650, China
| | - Yong Zheng
- School of Geographical Sciences, Fujian Normal University, Fuzhou 350007, China
| | - Jiangming Mo
- Key Laboratory of Vegetation Restoration and Management of Degraded Ecosystems, and Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou 510650, China
| | - Binghong Xiong
- Key Laboratory of Vegetation Restoration and Management of Degraded Ecosystems, and Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou 510650, China
| | - Xiankai Lu
- Key Laboratory of Vegetation Restoration and Management of Degraded Ecosystems, and Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou 510650, China.
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13
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Li Y, Ma J, Yu Y, Li Y, Shen X, Huo S, Xia X. Effects of multiple global change factors on soil microbial richness, diversity and functional gene abundances: A meta-analysis. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022; 815:152737. [PMID: 34998753 DOI: 10.1016/j.scitotenv.2021.152737] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/03/2021] [Revised: 12/23/2021] [Accepted: 12/23/2021] [Indexed: 06/14/2023]
Abstract
Soil microbial richness, diversity, and functional gene abundance are crucial factors affecting belowground ecosystem functions; however, there is still a lack of systematic understanding of their responses to global change. Here, we conducted a worldwide meta-analysis using 1071 observation data concerning the effects of global change factors (GCFs), including warming (W), increased precipitation (PPT+), decreased precipitation (PPT-), elevated CO2 concentration (eCO2), and nitrogen deposition (N), to evaluate their individual, combined, and interactive effects on soil microbial properties across different groups and ecosystems. Across the dataset, eCO2 increased microbial richness and diversity by 40.5% and 4.6%, respectively; warming and N addition decreased the abundance of denitrification functional genes (nirS, nirK, and nozS); N addition had a greater impact on soil C-cycling functional genes than on N-cycling ones. Long-term precipitation change was conducive to the increase in soil microbial richness, and fungal richness change was more sensitive than bacterial richness, but the sensitivity of bacteria richness to N addition was positively correlated with experimental duration. Soil microbial richness, diversity, and functional gene abundances could be significantly affected by individual or multiple GCF changes, and their interactions are mainly additive. W×eCO2 on microbial diversity, and N×PPT+ and W×N on N-cycling functional gene abundance showed synergistic interactions. Based on the limitations of the collected data and the findings, we suggest designing experiments with multiple GCFs and long experimental durations and incorporating the effects and interactions of multiple drivers into ecosystem models to accurately predict future soil microbial properties and functions under future global changes.
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Affiliation(s)
- Yuqian Li
- State Key Laboratory of Water Environment Simulation, School of Environment, Beijing Normal University, No. 19 Xinjiekouwai Street, Haidian District, Beijing 100875, PR China.
| | - Junwei Ma
- State Key Laboratory of Water Environment Simulation, School of Environment, Beijing Normal University, No. 19 Xinjiekouwai Street, Haidian District, Beijing 100875, PR China.
| | - Yi Yu
- State Key Laboratory of Water Environment Simulation, School of Environment, Beijing Normal University, No. 19 Xinjiekouwai Street, Haidian District, Beijing 100875, PR China
| | - Yijia Li
- State Key Laboratory of Water Environment Simulation, School of Environment, Beijing Normal University, No. 19 Xinjiekouwai Street, Haidian District, Beijing 100875, PR China.
| | - Xinyi Shen
- State Key Laboratory of Water Environment Simulation, School of Environment, Beijing Normal University, No. 19 Xinjiekouwai Street, Haidian District, Beijing 100875, PR China
| | - Shouliang Huo
- State Key Laboratory of Environmental Criteria and Risk Assessment, Chinese Research Academy of Environmental Sciences, Beijing 100012, PR China
| | - Xinghui Xia
- State Key Laboratory of Water Environment Simulation, School of Environment, Beijing Normal University, No. 19 Xinjiekouwai Street, Haidian District, Beijing 100875, PR China.
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14
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Hu Y, Jiang H, Chen Y, Wang Z, Yan Y, Sun P, Lu X. Nitrogen addition altered the microbial functional potentials of carbon and nitrogen transformation in alpine steppe soils on the Tibetan Plateau. Glob Ecol Conserv 2021. [DOI: 10.1016/j.gecco.2021.e01937] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022] Open
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15
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Jing H, Liu Y, Wang G, Liu G. Contrasting effects of nitrogen addition on rhizosphere soil CO 2, N 2O, and CH 4 emissions of fine roots with different diameters from Pinus tabulaeformis forest using laboratory incubation. THE SCIENCE OF THE TOTAL ENVIRONMENT 2021; 780:146298. [PMID: 33770604 DOI: 10.1016/j.scitotenv.2021.146298] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/20/2020] [Revised: 03/01/2021] [Accepted: 03/02/2021] [Indexed: 06/12/2023]
Abstract
Nitrogen (N) addition has variable effects on chemical composition, function, and turnover of roots with different diameters. However, it is unclear whether N addition has variable effects on greenhouse gas (GHG) emission in rhizosphere soil. We performed N addition (0-9 g N m-2 y-1) experiment in a Pinus tabulaeformis forest and a lab-incubation experiment to determine the effects of N addition on carbon dioxide (CO2), nitrous oxide (N2O), and methane (CH4) emissions in rhizosphere soils of roots with different diameters (very fine roots: <0.5 mm, intermediate fine roots: 0.5-1.0 mm, largest fine roots: 1.0-2.0 mm). Nitrogen addition significantly promoted CO2 emission and CH4 uptake, with maximum values (CO2, 623.15 mg C kg soil-1; CH4, 1794.49 μg C kg soil-1) in the 6 or 9 g N m-2 y-1 treatments (P < 0.05). Nitrous oxide emissions were inhibited, with the greatest inhibitory effect in the 9 g N m-2 y-1 treatment (48.63 μg N kg soil-1). Total phosphorus (TP) content significantly decreased and increased in rhizosphere soil and non-rhizosphere soil after N addition, respectively, while organic carbon (OC), total N (TN), ammonium (NH4+), and nitrate (NO3-) contents in rhizosphere soil increased. A greater change in chemical properties occurred in rhizosphere soil of largest fine roots than very fine roots. Carbon dioxide and nitrous oxide emissions in rhizosphere soil among root sizes exhibited similar responses to N addition. While CH4 uptake was more responsive to N addition in rhizosphere soil with very fine roots than with largest fine roots. Basically, OC, TN, NO3-, and NH4+ were key soil components driving GHG emissions; NO3- promoted CH4 uptake and N2O emissions, NH4+ inhibited CO2 emissions. GHG response to N addition varied greatly, particularly in rhizosphere soil with different root sizes mainly related to its chemical properties.
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Affiliation(s)
- Hang Jing
- State Key Laboratory of Soil Erosion and Dryland Farming on the Loess Plateau, Institute of Soil and Water Conservation, Northwest A&F University, Yangling, 712100, Shaanxi Province, China.
| | - Ying Liu
- State Key Laboratory of Soil Erosion and Dryland Farming on the Loess Plateau, Institute of Soil and Water Conservation, Northwest A&F University, Yangling, 712100, Shaanxi Province, China; Institute of Soil and Water Conservation, Chinese Academy of Science and Ministry of Water Resources, Yangling, 712100, Shaanxi, China
| | - Guoliang Wang
- State Key Laboratory of Soil Erosion and Dryland Farming on the Loess Plateau, Institute of Soil and Water Conservation, Northwest A&F University, Yangling, 712100, Shaanxi Province, China; Institute of Soil and Water Conservation, Chinese Academy of Science and Ministry of Water Resources, Yangling, 712100, Shaanxi, China
| | - Guobin Liu
- State Key Laboratory of Soil Erosion and Dryland Farming on the Loess Plateau, Institute of Soil and Water Conservation, Northwest A&F University, Yangling, 712100, Shaanxi Province, China; Institute of Soil and Water Conservation, Chinese Academy of Science and Ministry of Water Resources, Yangling, 712100, Shaanxi, China.
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16
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Zhang Z, Wan J, Liu L, Ye M, Jiang X. Metagenomics reveals functional profiling of microbial communities in OCP contaminated sites with rapeseed oil and tartaric acid biostimulation. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2021; 289:112515. [PMID: 33819653 DOI: 10.1016/j.jenvman.2021.112515] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/07/2021] [Revised: 03/09/2021] [Accepted: 03/27/2021] [Indexed: 06/12/2023]
Abstract
Organochlorine pesticides (OCPs) contaminated sites pose great threats to both human health and environmental safety. Targeted bioremediation in these regions largely depends on microbial diversity and activity. This study applied metagenomics to characterize the microbial communities and functional groups composition features during independent or simultaneous rapeseed oil and tartaric acid applications, as well as the degradation kinetics of OCPs. Results showed that: the degradation rates of α-chlordane, β-chlordane and mirex were better when (0.50% w/w) rapeseed oil and (0.05 mol L-1) tartaric acid were applied simultaneously than singular use, yielding removal rates of 56.4%, 53.9%, and 49.4%, respectively. Meanwhile, bio-stimulation facilitated microbial enzyme (catalase/superoxide dismutase/peroxidase) activity in soils significantly, promoting the growth of dominant bacterial communities. Classification at phylum level showed that the relative abundance of Proteobacteria was significantly increased (p < 0.05). Network analysis showed that bio-stimulation substantially increased the dominant bacterial community's proportion, especially Proteobacteria. The functional gene results illustrated that bio-stimulation facilitated total relative abundance of degradation genes, phosphorus, carbon, nitrogen, sulfur metabolic genes, and iron transporting genes (p < 0.05). In metabolic pathways, functional genes related to methanogenesis and ammonia generation were markedly upregulated, indicating that bio-stimulation promoted the transformation of metabolic genes, such as carbon and nitrogen. This research is conducive to exploring the microbiological response mechanisms of bio-stimulation in indigenous flora, which may provide technical support for assessing the microbial ecological remediation outcomes of bio-stimulation in OCP contaminated sites.
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Affiliation(s)
- Zhongyun Zhang
- Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing, 210008, China; University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Jinzhong Wan
- Nanjing Institute of Environmental Sciences, Ministry of Environmental Protection of China, Nanjing, 210008, China
| | - Li Liu
- Nanjing Institute of Environmental Sciences, Ministry of Environmental Protection of China, Nanjing, 210008, China; School of Earth Science and Engineering, Hohai University, Nanjing, 210008, China
| | - Mao Ye
- Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing, 210008, China.
| | - Xin Jiang
- Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing, 210008, China
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17
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Chen Q, Yuan Y, Hu Y, Wang J, Si G, Xu R, Zhou J, Xi C, Hu A, Zhang G. Excessive nitrogen addition accelerates N assimilation and P utilization by enhancing organic carbon decomposition in a Tibetan alpine steppe. THE SCIENCE OF THE TOTAL ENVIRONMENT 2021; 764:142848. [PMID: 33268263 DOI: 10.1016/j.scitotenv.2020.142848] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/29/2020] [Revised: 09/23/2020] [Accepted: 10/03/2020] [Indexed: 05/23/2023]
Abstract
High amounts of deposited nitrogen (N) dramatically influence the stability and functions of alpine ecosystems by changing soil microbial community functions, but the mechanism is still unclear. To investigate the impacts of increased N deposition on microbial community functions, a 2-year multilevel N addition (0, 10, 20, 40, 80 and 160 kg N ha-1 year-1) field experiment was set up in an alpine steppe on the Tibetan Plateau. Soil microbial functional genes (GeoChip 4.6), together with soil enzyme activity, soil organic compounds and environmental variables, were used to explore the response of microbial community functions to N additions. The results showed that the N addition rate of 40 kg N ha-1 year-1 was the critical value for soil microbial functional genes in this alpine steppe. A small amount of added N (≤40 kg N ha-1 year-1) had no significant effects on the abundance of microbial functional genes, while high amounts of added N (>40 kg N ha-1 year-1) significantly increased the abundance of soil organic carbon degradation genes. Additionally, the abundance of microbial functional genes associated with NH4+, including ammonification, N fixation and assimilatory nitrate reduction pathways, was significantly increased under high N additions. Further, high N additions also increased soil organic phosphorus utilization, which was indicated by the increase in the abundance of phytase genes and alkaline phosphatase activity. Plant richness, soil NO2-/NH4+ and WSOC/WSON were significantly correlated with the abundance of microbial functional genes, which drove the changes in microbial community functions under N additions. These findings help us to predict that increased N deposition in the future may alter soil microbial functional structure, which will lead to changes in microbially-mediated biogeochemical dynamics in alpine steppes on the Tibetan Plateau and will have extraordinary impacts on microbial C, N and P cycles.
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Affiliation(s)
- Qiuyu Chen
- CAS Key Laboratory of Alpine Ecology, Institute of Tibetan Plateau Research, Chinese Academy of Sciences (CAS), Beijing 100101, China
| | - Yanli Yuan
- CAS Key Laboratory of Alpine Ecology, Institute of Tibetan Plateau Research, Chinese Academy of Sciences (CAS), Beijing 100101, China
| | - Yilun Hu
- CAS Key Laboratory of Alpine Ecology, Institute of Tibetan Plateau Research, Chinese Academy of Sciences (CAS), Beijing 100101, China; University of Chinese Academy of Sciences, Beijing 100101, China
| | - Jian Wang
- Land and Resources College, China West Normal University, Nanchong 637009, Sichuan, China
| | - Guicai Si
- Lanzhou Center for Oil and Gas Resources, Northwest Institute of Eco-Environment and Resources, Chinese Academy of Sciences, Lanzhou 730000, China
| | - Ri Xu
- CAS Key Laboratory of Alpine Ecology, Institute of Tibetan Plateau Research, Chinese Academy of Sciences (CAS), Beijing 100101, China
| | - Jizhong Zhou
- Institute for Environmental Genomics and Department of Microbiology and Plant Biology, University Oklahoma, Norman, OK 73019, USA; State Key Joint Laboratory of Environment Simulation and Pollution Control, School of Environment, Tsinghua University, Beijing 100084, China
| | - Chuanwu Xi
- Department of Environmental Health Sciences, School of Public Health, University of Michigan, Ann Arbor, MI 48109, USA
| | - Ang Hu
- College of Resources and Environment, Hunan Agricultural University, Changsha 410128, China
| | - Gengxin Zhang
- CAS Key Laboratory of Alpine Ecology, Institute of Tibetan Plateau Research, Chinese Academy of Sciences (CAS), Beijing 100101, China; CAS Center for Excellence in Tibetan Plateau Earth Sciences, Chinese Academy of Sciences, Beijing 100101, China.
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