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Florek M, Nawrot U, Korzeniowska-Kowal A, Włodarczyk K, Wzorek A, Woźniak-Biel A, Brzozowska M, Galli J, Bogucka A, Król J. An analysis of the population of Cryptococcus neoformans strains isolated from animals in Poland, in the years 2015-2019. Sci Rep 2021; 11:6639. [PMID: 33758319 PMCID: PMC7987961 DOI: 10.1038/s41598-021-86169-3] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/27/2020] [Accepted: 03/11/2021] [Indexed: 02/07/2023] Open
Abstract
Fungi belonging to the Cryptococcus neoformans/C. gattii species complex (CNGSC) are pathogens causing severe infections in humans and animals, that for humans may result in a mortality rate ranging up to 70%. The CNGSC is divided into eight major molecular types, that may differ in their virulence and susceptibility. In order to fully understand the epidemiology of cryptococcosis, it is important to study the world distribution and population structure of these pathogens. The present study is the first presenting a population of strains isolated in Poland and one of the few using a multi-species animal group as a source of the specimen. The pathogen was present in 2.375% of the tested animals. The URA5-RFLP and MALDI-TOF MS analyses have revealed that the population consisted exclusively of C. neoformans strains, with a predominance of major molecular type VNIV (C. neoformans var. neoformans). The MALDI-TOF MS was used to perform the CNGSC strains identification on both the species and sub-species level. Despite the fact that the animals providing the specimens were not treated with 5-fluorocytosine, around 10% of the tested population presented MIC values exceeding 64 mg/L, indicating the existence of the 5-fluorocytosine-resistant strains in the environment.
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Affiliation(s)
- Magdalena Florek
- Department of Pathology, The Faculty of Veterinary Medicine, Wrocław University of Environmental and Life Sciences, Norwida 31, 50-375, Wrocław, Poland.
| | - Urszula Nawrot
- Department of Pharmaceutical Microbiology and Parasitology, Wrocław Medical University, Borowska 211a, 50-556, Wrocław, Poland
| | - Agnieszka Korzeniowska-Kowal
- Department of Immunology of Infectious Diseases, Hirszfeld Institute of Immunology and Experimental Therapy, Polish Academy of Sciences, Weigla 12, 53-114, Wrocław, Poland
| | - Katarzyna Włodarczyk
- Department of Pharmaceutical Microbiology and Parasitology, Wrocław Medical University, Borowska 211a, 50-556, Wrocław, Poland
| | - Anna Wzorek
- Department of Immunology of Infectious Diseases, Hirszfeld Institute of Immunology and Experimental Therapy, Polish Academy of Sciences, Weigla 12, 53-114, Wrocław, Poland
| | - Anna Woźniak-Biel
- Department of Epizootiology and Clinic of Birds and Exotic Animals, The Faculty of Veterinary Medicine, Wrocław University of Environmental and Life Sciences, pl. Grunwaldzki 45, 50-366, Wrocław, Poland
| | - Magdalena Brzozowska
- Referral Animal Hospital Strömsholm, Djursjukhusvägen 11, 73494, Strömsholm, Sweden
| | - Józef Galli
- Veterinary Laboratory Vetlab, Wodzisławska 6, 52-017, Wrocław, Poland
| | - Anna Bogucka
- Veterinary Laboratory Vetlab, Wodzisławska 6, 52-017, Wrocław, Poland
| | - Jarosław Król
- Department of Pathology, The Faculty of Veterinary Medicine, Wrocław University of Environmental and Life Sciences, Norwida 31, 50-375, Wrocław, Poland
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Helke KL, Meyerholz DK, Beck AP, Burrough ER, Derscheid RJ, Löhr C, McInnes EF, Scudamore CL, Brayton CF. Research Relevant Background Lesions and Conditions: Ferrets, Dogs, Swine, Sheep, and Goats. ILAR J 2021; 62:133-168. [PMID: 33712827 DOI: 10.1093/ilar/ilab005] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/15/2020] [Revised: 11/17/2020] [Accepted: 01/06/2021] [Indexed: 01/01/2023] Open
Abstract
Animal models provide a valuable tool and resource for biomedical researchers as they investigate biological processes, disease pathogenesis, novel therapies, and toxicologic studies. Interpretation of animal model data requires knowledge not only of the processes/diseases being studied but also awareness of spontaneous conditions and background lesions in the model that can influence or even confound the study results. Species, breed/stock, sex, age, anatomy, physiology, diseases (noninfectious and infectious), and neoplastic processes are model features that can impact the results as well as study interpretation. Here, we review these features in several common laboratory animal species, including ferret, dog (beagle), pig, sheep, and goats.
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Affiliation(s)
- Kristi L Helke
- Department of Comparative Medicine, Medical University of South Carolina, Charleston, South Carolina, USA
| | - David K Meyerholz
- Department of Pathology, University of Iowa Carver College of Medicine, Iowa City, Iowa, USA
| | - Amanda P Beck
- Department of Pathology, Albert Einstein College of Medicine, Bronx, New York, USA
| | - Eric R Burrough
- Veterinary Diagnostic and Production Animal Medicine Department, Iowa State University, Ames, Iowa, USA
| | - Rachel J Derscheid
- Veterinary Diagnostic and Production Animal Medicine Department, Iowa State University, Ames, Iowa, USA
| | - Christiane Löhr
- Department of Biomedical Sciences, Oregon State University, Corvallis, Oregon, USA
| | - Elizabeth F McInnes
- Toxicologic Pathology, Toxicology Section, Human Safety at Syngenta, in Jealott's Hill, Bracknell, United Kingdom
| | - Cheryl L Scudamore
- ExePathology, Pathologist at ExePathology, Exmouth, Devon, United Kingdom
| | - Cory F Brayton
- Department of Molecular and Comparative Pathobiology, Johns Hopkins University School of Medicine, Baltimore, Maryland, USA
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6
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Montagna MT, De Donno A, Caggiano G, Serio F, De Giglio O, Bagordo F, D'Amicis R, Lockhart SR, Cogliati M. Molecular characterization of Cryptococcus neoformans and Cryptococcus gattii from environmental sources and genetic comparison with clinical isolates in Apulia, Italy. ENVIRONMENTAL RESEARCH 2018; 160:347-352. [PMID: 29054089 DOI: 10.1016/j.envres.2017.09.032] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/16/2017] [Revised: 09/28/2017] [Accepted: 09/30/2017] [Indexed: 06/07/2023]
Abstract
The present study investigated the environmental distribution of Cryptococcus neoformans and C. gattii species complex molecular types, mating types and sequence types in Apulia, a region of Southern Italy. A total of 2078 specimens from arboreal and animal sources were analyzed. The percentage of positive samples was similar among both arboreal and animal specimens: 4.2% vs. 5.1% for C. neoformans species complex and 0.6% vs. 1.4% for C. gattii species complex. Molecular typing identified 78 isolates as VNI (76 αA and two aA), one as AD-hybrid αADa, and 16 as VGI aB. VNI isolates presented 10 different sequence types (STs) and VGI isolates two. The most frequent STs among C. neoformans and C. gattii species complex isolates were ST23 (51%) and ST156 (90%), respectively. Comparison with molecular types and STs results obtained from 21 clinical isolates collected in Apulia showed that one C. neoformans VNI clinical isolate shared an identical sequence type of one arboreal isolate (ST61) and that one C. gattii VGI clinical isolate matched with the main ST (ST156) present in the environment. In addition, molecular type VNIV was found only among clinical isolates and was absent in the investigated environmental area. In conclusion, the present study identified which C. neoformans and C. gattii species complex genotypes are circulating in Apulia, defined their ecological niches and revealed the relationship with clinical cases. It represents a basal study for addressing future investigations and public health interventions in the region.
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Affiliation(s)
- Maria Teresa Montagna
- Department of Biomedical Science and Human Oncology, University of Bari 'Aldo Moro', Bari, Italy
| | - Antonella De Donno
- Department of Biological and Environmental Science and Technology, University of Salento, Lecce, Italy
| | - Giuseppina Caggiano
- Department of Biomedical Science and Human Oncology, University of Bari 'Aldo Moro', Bari, Italy.
| | - Francesca Serio
- Department of Biological and Environmental Science and Technology, University of Salento, Lecce, Italy
| | - Osvalda De Giglio
- Department of Biomedical Science and Human Oncology, University of Bari 'Aldo Moro', Bari, Italy
| | - Francesco Bagordo
- Department of Biological and Environmental Science and Technology, University of Salento, Lecce, Italy
| | - R D'Amicis
- Department of Biomedical Sciences for Health, Università degli Studi di Milano, Milano, Italy
| | - Shawn R Lockhart
- Fungal Reference Laboratory, Centers for Disease Control and Prevention, Atlanta, GA, USA
| | - Massimo Cogliati
- Department of Biomedical Sciences for Health, Università degli Studi di Milano, Milano, Italy
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7
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Cogliati M, D'Amicis R, Zani A, Montagna MT, Caggiano G, De Giglio O, Balbino S, De Donno A, Serio F, Susever S, Ergin C, Velegraki A, Ellabib MS, Nardoni S, Macci C, Oliveri S, Trovato L, Dipineto L, Rickerts V, McCormick-Smith I, Akcaglar S, Tore O, Mlinaric-Missoni E, Bertout S, Mallié M, Martins MDL, Vencà ACF, Vieira ML, Sampaio AC, Pereira C, Criseo G, Romeo O, Ranque S, Al-Yasiri MHY, Kaya M, Cerikcioglu N, Marchese A, Vezzulli L, Ilkit M, Desnos-Ollivier M, Pasquale V, Korem M, Polacheck I, Scopa A, Meyer W, Ferreira-Paim K, Hagen F, Theelen B, Boekhout T, Lockhart SR, Tintelnot K, Tortorano AM, Dromer F, Varma A, Kwon-Chung KJ, Inácio J, Alonso B, Colom MF. Environmental distribution of Cryptococcus neoformans and C. gattii around the Mediterranean basin. FEMS Yeast Res 2016; 16:fow045. [PMID: 27188887 DOI: 10.1093/femsyr/fow045] [Citation(s) in RCA: 43] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 05/04/2016] [Indexed: 11/15/2022] Open
Abstract
In order to elucidate the distribution of Cryptococcus neoformans and C. gattii in the Mediterranean basin, an extensive environmental survey was carried out during 2012-2015. A total of 302 sites located in 12 countries were sampled, 6436 samples from 3765 trees were collected and 5% of trees were found to be colonized by cryptococcal yeasts. Cryptococcus neoformans was isolated from 177 trees and C. gattii from 13. Cryptococcus neoformans colonized 27% of Ceratonia, 10% of Olea, Platanus and Prunus trees and a lower percentage of other tree genera. The 13 C. gattii isolates were collected from five Eucalyptus, four Ceratonia, two Pinus and two Olea trees. Cryptococcus neoformans was distributed all around the Mediterranean basin, whereas C. gattii was isolated in Greece, Southern Italy and Spain, in agreement with previous findings from both clinical and environmental sources. Among C. neoformans isolates, VNI was the prevalent molecular type but VNII, VNIV and VNIII hybrid strains were also isolated. With the exception of a single VGIV isolate, all C. gattii isolates were VGI. The results confirmed the presence of both Cryptococcus species in the Mediterranean environment, and showed that both carob and olive trees represent an important niche for these yeasts.
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Affiliation(s)
- Massimo Cogliati
- Dip. Scienze Biomediche per la Salute, Università degli Studi di Milano, Via Pascal 36, 20133 Milano, Italy
| | - Roberta D'Amicis
- Dip. Scienze Biomediche per la Salute, Università degli Studi di Milano, Via Pascal 36, 20133 Milano, Italy
| | - Alberto Zani
- Dip. Scienze Biomediche per la Salute, Università degli Studi di Milano, Via Pascal 36, 20133 Milano, Italy
| | - Maria Teresa Montagna
- Dip. Scienze Biomediche ed Oncologia Umana, Università degli Studi di Bari 'Aldo Moro', Piazza Giulio Cesare 11, 70124 Bari, Italy
| | - Giuseppina Caggiano
- Dip. Scienze Biomediche ed Oncologia Umana, Università degli Studi di Bari 'Aldo Moro', Piazza Giulio Cesare 11, 70124 Bari, Italy
| | - Osvalda De Giglio
- Dip. Scienze Biomediche ed Oncologia Umana, Università degli Studi di Bari 'Aldo Moro', Piazza Giulio Cesare 11, 70124 Bari, Italy
| | - Stella Balbino
- Dip. Scienze Biomediche ed Oncologia Umana, Università degli Studi di Bari 'Aldo Moro', Piazza Giulio Cesare 11, 70124 Bari, Italy
| | - Antonella De Donno
- Dip. di Scienze e Tecnologie Biologiche ed Ambientali, Università del Salento, Via Monteroni, 73100 Lecce, Italy
| | - Francesca Serio
- Dip. di Scienze e Tecnologie Biologiche ed Ambientali, Università del Salento, Via Monteroni, 73100 Lecce, Italy
| | - Serdar Susever
- Dept. of Nutrition and Dietetics, Cyprus Near East University, Near East Boulevard, 99138 Nicosia, Cyprus
| | - Cagri Ergin
- Medical School, Pamukkale University, Kliniki Kampusu, 20160 Denizli, Turkey
| | - Aristea Velegraki
- Medical School National and Kapodistrian University of Athens, Mikras Asias 75, 11527 Athens, Greece
| | - Mohamed S Ellabib
- Medical College, University of Tripoli, Tripoli University Road, Tripoli, Libya
| | - Simona Nardoni
- Dip. Scienze Veterinarie, Università di Pisa, Via delle Piagge 2, 56124 Pisa, Italy
| | - Cristina Macci
- Istituto per lo Studio degli Ecosistemi (ISE), National Research Council (CNR), Via Moruzzi 1, 56124 Pisa, Italy
| | - Salvatore Oliveri
- Dip. di Scienze Microbiologiche e Scienze Ginecologiche, Università degli Studi di Catania, Via Androne 81, 95124 Catania, Italy
| | - Laura Trovato
- Dip. di Scienze Microbiologiche e Scienze Ginecologiche, Università degli Studi di Catania, Via Androne 81, 95124 Catania, Italy
| | - Ludovico Dipineto
- Dip. di Medicina Veterinaria e Produzioni Animali, University of Napoli Federico II, C.so Umberto I 40, 80138 Napoli, Italy
| | - Volker Rickerts
- Dept. of Infeciuos Diseases, Robert-Koch Institute, D-13302 Berlin, Germany
| | | | - Sevim Akcaglar
- School of Medicine, Uludag University, Gorukle Kampusu, 16059 Bursa, Turkey
| | - Okan Tore
- School of Medicine, Uludag University, Gorukle Kampusu, 16059 Bursa, Turkey
| | | | - Sebastien Bertout
- Unité Mixte Internationale 'Recherches Translationnelles sur l'infection à VIH et les Maladies Infectieuses', Université de Montpellier, 15 Avenue Charles Flahault, 34093 Montpellier, France
| | - Michele Mallié
- Unité Mixte Internationale 'Recherches Translationnelles sur l'infection à VIH et les Maladies Infectieuses', Université de Montpellier, 15 Avenue Charles Flahault, 34093 Montpellier, France
| | - Maria da Luz Martins
- Instituto de Higiene e Medicina Tropical, Rua da Junqueira 100, 1349-008 Lisbon, Portugal
| | - Ana C F Vencà
- Instituto de Higiene e Medicina Tropical, Rua da Junqueira 100, 1349-008 Lisbon, Portugal
| | - Maria L Vieira
- Instituto de Higiene e Medicina Tropical, Rua da Junqueira 100, 1349-008 Lisbon, Portugal
| | - Ana C Sampaio
- CITAB, Universidade de Trás-os-Montes e Alto Douro, Quinta dos Prados, 5000-801 Vila Real, Portugal
| | - Cheila Pereira
- CITAB, Universidade de Trás-os-Montes e Alto Douro, Quinta dos Prados, 5000-801 Vila Real, Portugal
| | - Giuseppe Criseo
- Department of Chemical, Biological, Pharmaceutical and Environmental Sciences, University of Messina, Piazza Pugliatti 1, 98122 Messina, Italy
| | - Orazio Romeo
- Department of Chemical, Biological, Pharmaceutical and Environmental Sciences, University of Messina, Piazza Pugliatti 1, 98122 Messina, Italy
| | - Stéphane Ranque
- IP-TPT Infections Parasitaires Transmission Pphysiopathologie et Therapeutiques, Aix-Marseille University, 27 Blv. Jean Moulin, 13005 Marseille, France
| | - Mohammed H Y Al-Yasiri
- IP-TPT Infections Parasitaires Transmission Pphysiopathologie et Therapeutiques, Aix-Marseille University, 27 Blv. Jean Moulin, 13005 Marseille, France
| | - Meltem Kaya
- School of Medicine, Marmara University, MÜ Göztepe Kampüsü, 34722 Istanbul, Turkey
| | - Nilgun Cerikcioglu
- School of Medicine, Marmara University, MÜ Göztepe Kampüsü, 34722 Istanbul, Turkey
| | - Anna Marchese
- Sezione di Microbiologia del DISC, Università di Genova-IRCCS San Martino IST Genova, Largo Benzi 10, 16132 Genova, Italy
| | - Luigi Vezzulli
- Dipartimento di Scienze della Terra, dell'Ambiente e della Vita (DISTAV), Università di Genova, C.so europa 26, 16132 Genova, Italy
| | - Macit Ilkit
- Dept. of Microbiology, University of Çukurova Sariçam, Çukurova Üniversitesi Rektörlüğü, 01330 Adana, Turkey
| | - Marie Desnos-Ollivier
- Institut Pasteur, CNRS, Unité de Mycologie Moléculaire, 25-28 Rue du Dr Roux, 75015 Paris, France
| | - Vincenzo Pasquale
- Dip. di Scienze e Tecnologie, Università degli Studi di Napoli Parthenope, Via Amm. F. Acton 38, 80133 Napoli, Italy
| | - Maya Korem
- Div. of Microbiology and Infectious Diseases, Hadassah-Hebrew University Medical Center, Ein Kerem, P.O. Box 12271 Jerusalem, Israel
| | - Itzhack Polacheck
- Div. of Microbiology and Infectious Diseases, Hadassah-Hebrew University Medical Center, Ein Kerem, P.O. Box 12271 Jerusalem, Israel
| | - Antonio Scopa
- Facoltà di Scienze Agrarie, Forestali e Ambientali, Università degli Studi della Basilicata, Via Nazario Sauro 85, 85100 Potenza, Italy
| | - Wieland Meyer
- Molecular Mycology Research Laboratory, CIDM, MBI, Sydney Medical School-Westmead Hospital, University of Sydney/Westmead Millennium Institute, 176 Hawkesbury Rd, NSW 2145 Westmead, NSW, Australia
| | - Kennio Ferreira-Paim
- Molecular Mycology Research Laboratory, CIDM, MBI, Sydney Medical School-Westmead Hospital, University of Sydney/Westmead Millennium Institute, 176 Hawkesbury Rd, NSW 2145 Westmead, NSW, Australia
| | - Ferry Hagen
- Canisius-Wilhelmina Hospital, Weg door Jonkerbos 100, 6532 SZ Nijmegen, The Netherlands
| | - Bart Theelen
- CBS-KNAW Fungal Biodiversity Centre, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands
| | - Teun Boekhout
- CBS-KNAW Fungal Biodiversity Centre, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands
| | - Shawn R Lockhart
- Centers for Disease Control and Prevention, 1600 Clifton Rd, Atlanta, GA 30333 Atlanta, USA
| | - Kathrin Tintelnot
- Dept. of Infeciuos Diseases, Robert-Koch Institute, D-13302 Berlin, Germany
| | - Anna Maria Tortorano
- Dip. Scienze Biomediche per la Salute, Università degli Studi di Milano, Via Pascal 36, 20133 Milano, Italy
| | - Françoise Dromer
- Institut Pasteur, CNRS, Unité de Mycologie Moléculaire, 25-28 Rue du Dr Roux, 75015 Paris, France
| | - Ashok Varma
- National Institute of Allergy and Infectious Diseases, 31 Center Dr, Bethesda, MD 20892 Bethesda, USA
| | - Kyung J Kwon-Chung
- National Institute of Allergy and Infectious Diseases, 31 Center Dr, Bethesda, MD 20892 Bethesda, USA
| | - Joäo Inácio
- School of Pharmacy and Biomolecular Sciences, University of Brighton, Lewes Road, BN2 4GJ Brighton, UK
| | - Beatriz Alonso
- School of Pharmacy and Biomolecular Sciences, University of Brighton, Lewes Road, BN2 4GJ Brighton, UK
| | - Maria F Colom
- Medical School, Universidad Miguel Hernández, Avenida de la Universidad, 03202 Alicante, Spain
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