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Ivanov B, Borisova-Mubarakshina M, Vilyanen D, Vetoshkina D, Kozuleva M. Cooperative pathway of O2 reduction to H2O2 in chloroplast thylakoid membrane: new insight into the Mehler reaction. Biophys Rev 2022; 14:857-869. [DOI: 10.1007/s12551-022-00980-4] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/07/2022] [Accepted: 07/03/2022] [Indexed: 11/30/2022] Open
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Khorobrykh S, Havurinne V, Mattila H, Tyystjärvi E. Oxygen and ROS in Photosynthesis. PLANTS (BASEL, SWITZERLAND) 2020; 9:E91. [PMID: 31936893 PMCID: PMC7020446 DOI: 10.3390/plants9010091] [Citation(s) in RCA: 119] [Impact Index Per Article: 29.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/27/2019] [Revised: 12/29/2019] [Accepted: 01/02/2020] [Indexed: 12/14/2022]
Abstract
Oxygen is a natural acceptor of electrons in the respiratory pathway of aerobic organisms and in many other biochemical reactions. Aerobic metabolism is always associated with the formation of reactive oxygen species (ROS). ROS may damage biomolecules but are also involved in regulatory functions of photosynthetic organisms. This review presents the main properties of ROS, the formation of ROS in the photosynthetic electron transport chain and in the stroma of chloroplasts, and ROS scavenging systems of thylakoid membrane and stroma. Effects of ROS on the photosynthetic apparatus and their roles in redox signaling are discussed.
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Affiliation(s)
| | | | | | - Esa Tyystjärvi
- Department of Biochemistry/Molecular Plant Biology, University of Turku, FI-20014 Turku, Finland or (S.K.); (V.H.); (H.M.)
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Ptushenko VV, Krishtalik LI. Reorganization energies of the electron transfer reactions involving quinones in the reaction center of Rhodobacter sphaeroides. PHOTOSYNTHESIS RESEARCH 2018; 138:167-175. [PMID: 30022339 DOI: 10.1007/s11120-018-0560-6] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/13/2018] [Accepted: 07/10/2018] [Indexed: 06/08/2023]
Abstract
In framework of the continuum electrostatics theory, the reorganization energies of the electron transfers QA--QB (fast phase), Bph--QA, P+-QA-, and P+-QB- in the photosynthetic bacterial reaction center have been calculated. The calculations were based on the static dielectric permittivity spatial distribution derived from the data on the electrogenesis, with the corresponding characteristic times relatively close to the reaction times of QA--QB (fast phase) and Bph--QA but much shorter than those times of the latter two recombination reactions. The calculated reorganization energies were reasonably close to the experimental estimates for QA--QB (fast phase) and Bph--QA but substantially lower than those of P+-QA- and P+-QB-. A higher effective dielectric permittivity contributes to this effect, but the dominant contribution is most probably made by a non-dielectric relaxation, especially for the P+-QB- recombination influenced by the proton transfer. This situation calls for reconsidering of the current electron transfer rate estimates.
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Affiliation(s)
- Vasily V Ptushenko
- A.N. Belozersky Institute of Physical-Chemical Biology, M.V. Lomonosov Moscow State University, Moscow, Russia.
- N.M. Emanuel Institute of Biochemical Physics, Russian Academy of Sciences, Moscow, Russia.
| | - Lev I Krishtalik
- A.N. Frumkin Institute of Physical Chemistry and Electrochemistry, Russian Academy of Sciences, Moscow, Russia.
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Li Z, Yuan S, Jia H, Gao F, Zhou M, Yuan N, Wu P, Hu Q, Sun D, Luo H. Ectopic expression of a cyanobacterial flavodoxin in creeping bentgrass impacts plant development and confers broad abiotic stress tolerance. PLANT BIOTECHNOLOGY JOURNAL 2017; 15:433-446. [PMID: 27638479 PMCID: PMC5362689 DOI: 10.1111/pbi.12638] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/05/2016] [Revised: 09/10/2016] [Accepted: 09/13/2016] [Indexed: 05/18/2023]
Abstract
Flavodoxin (Fld) plays a pivotal role in photosynthetic microorganisms as an alternative electron carrier flavoprotein under adverse environmental conditions. Cyanobacterial Fld has been demonstrated to be able to substitute ferredoxin of higher plants in most electron transfer processes under stressful conditions. We have explored the potential of Fld for use in improving plant stress response in creeping bentgrass (Agrostis stolonifera L.). Overexpression of Fld altered plant growth and development. Most significantly, transgenic plants exhibited drastically enhanced performance under oxidative, drought and heat stress as well as nitrogen (N) starvation, which was associated with higher water retention and cell membrane integrity than wild-type controls, modified expression of heat-shock protein genes, production of more reduced thioredoxin, elevated N accumulation and total chlorophyll content as well as up-regulated expression of nitrite reductase and N transporter genes. Further analysis revealed that the expression of other stress-related genes was also impacted in Fld-expressing transgenics. Our data establish a key role of Fld in modulating plant growth and development and plant response to multiple sources of adverse environmental conditions in crop species. This demonstrates the feasibility of manipulating Fld in crop species for genetic engineering of plant stress tolerance.
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Affiliation(s)
- Zhigang Li
- College of Plant Science and TechnologyHuazhong Agricultural UniversityWuhanHubeiChina
- Department of Genetics and BiochemistryClemson UniversityClemsonSCUSA
| | - Shuangrong Yuan
- Department of Genetics and BiochemistryClemson UniversityClemsonSCUSA
| | - Haiyan Jia
- Department of Genetics and BiochemistryClemson UniversityClemsonSCUSA
- The Applied Plant Genomics Laboratory of Crop Genomics and Bioinformatics Centreand National Key Laboratory of Crop Genetics and Germplasm EnhancementNanjing Agricultural UniversityNanjingJiangsuChina
| | - Fangyuan Gao
- Department of Genetics and BiochemistryClemson UniversityClemsonSCUSA
- Crop Research InstituteSichuan Academy of Agricultural SciencesChengduSichuanChina
| | - Man Zhou
- Department of Genetics and BiochemistryClemson UniversityClemsonSCUSA
| | - Ning Yuan
- Department of Genetics and BiochemistryClemson UniversityClemsonSCUSA
| | - Peipei Wu
- Department of Genetics and BiochemistryClemson UniversityClemsonSCUSA
| | - Qian Hu
- Department of Genetics and BiochemistryClemson UniversityClemsonSCUSA
| | - Dongfa Sun
- College of Plant Science and TechnologyHuazhong Agricultural UniversityWuhanHubeiChina
| | - Hong Luo
- Department of Genetics and BiochemistryClemson UniversityClemsonSCUSA
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Kozuleva MA, Ivanov BN. The Mechanisms of Oxygen Reduction in the Terminal Reducing Segment of the Chloroplast Photosynthetic Electron Transport Chain. PLANT & CELL PHYSIOLOGY 2016; 57:1397-1404. [PMID: 27016099 DOI: 10.1093/pcp/pcw035] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/29/2015] [Accepted: 02/10/2016] [Indexed: 05/25/2023]
Abstract
The review is dedicated to ascertainment of the roles of the electron transfer cofactors of the pigment-protein complex of PSI, ferredoxin (Fd) and ferredoxin-NADP reductase in oxygen reduction in the photosynthetic electron transport chain (PETC) in the light. The data regarding oxygen reduction in other segments of the PETC are briefly analyzed, and it is concluded that their participation in the overall process in the PETC under unstressful conditions should be insignificant. Data concerning the contribution of Fd to the oxygen reduction in the PETC are examined. A set of collateral evidence as well as results of direct measurements of the involvement of Fd in this process in the presence of isolated thylakoids led to the inference that this contribution in vivo is negligible. The increase in oxygen reduction rate in the isolated thylakoids in the presence of either Fd or Fd plus NADP+ under increasing light intensity was attributed to the increase in oxygen reduction executed by the membrane-bound oxygen reductants. Data are presented which imply that a main reductant of the O2 molecule in the terminal reducing segment of the PETC is the electron transfer cofactor of PSI, phylloquinone. The physiological significance of characteristic properties of oxygen reductants in this segment of the PETC is discussed.
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Affiliation(s)
- Marina A Kozuleva
- Photosynthetic Electron Transport lab., Institute of Basic Biological Problems, Pushchino, 142290, Russia
| | - Boris N Ivanov
- Photosynthetic Electron Transport lab., Institute of Basic Biological Problems, Pushchino, 142290, Russia
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Electrostatics of the photosynthetic bacterial reaction center. Protonation of Glu L 212 and Asp L 213 — A new method of calculation. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS 2015. [DOI: 10.1016/j.bbabio.2015.07.010] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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Volotsenko I, Molotskii M, Borovikova A, Nelson N, Rosenwaks Y. Evidence for deep acceptor centers in plant photosystem I crystals. J Phys Chem B 2015; 119:1374-9. [PMID: 25541816 DOI: 10.1021/jp5112422] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Dry micrometer-thick crystalline photosystem I (PSI) has been shown to generate unprecedented large photovoltage under illumination. We use variable-temperature Kelvin probe force microscopy to show that deep acceptor centers are responsible for this anomalous photovoltage. We assumed that these centers are located close to the positively charged F(B)(2+) clusters, forming a coupled center that effectively captures the photoexcited electron into a deep state. We extract the main inherent parameters of the deep centers, which are extremely important in the potential use of photosynthetic proteins in various optoelectronic devices.
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Affiliation(s)
- Irina Volotsenko
- Department of Physical Electronics, Faculty of Engineering, and ‡Department of Biochemistry and Molecular Biology, Faculty of Life Sciences, Tel Aviv University , Tel Aviv 69978, Israel
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Mubarakshina MM, Ivanov BN. The production and scavenging of reactive oxygen species in the plastoquinone pool of chloroplast thylakoid membranes. PHYSIOLOGIA PLANTARUM 2010; 140:103-10. [PMID: 20553418 DOI: 10.1111/j.1399-3054.2010.01391.x] [Citation(s) in RCA: 72] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/08/2023]
Abstract
Reactive oxygen species (ROS) resulting from oxygen reduction, superoxide anion radical O2(*-) and hydrogen peroxide H(2)O(2) are very significant in the cell metabolism of aerobic organisms. They can be destructive and lead to apoptosis and they can also serve as signal molecules. In the light, chloroplasts are known to be one of the main sources of ROS in plants. However, the components involved in oxygen reduction and the detailed chemical mechanism are not yet well established. The present review describes the experimental data and theoretical considerations that implicate the plastoquinone pool (PQ-pool) in this process. The evidence indicates that the PQ-pool has a dual role: (1) the reduction of O(2) by plastosemiquinone to superoxide and (2) the reduction of superoxide by plastohydroquinone to hydrogen peroxide. The second role represents not only the scavenging of superoxide, but also the generation of hydrogen peroxide as an important signaling molecule. The regulatory and protective functions of the PQ-pool are discussed in the context of these reactions.
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Affiliation(s)
- Maria M Mubarakshina
- Institute of Basic Biological Problems, Russian Academy of Sciences, Pushchino, Russia
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Kozuleva MA, Ivanov BN. Evaluation of the participation of ferredoxin in oxygen reduction in the photosynthetic electron transport chain of isolated pea thylakoids. PHOTOSYNTHESIS RESEARCH 2010; 105:51-61. [PMID: 20532996 DOI: 10.1007/s11120-010-9565-5] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/26/2009] [Accepted: 05/25/2010] [Indexed: 05/25/2023]
Abstract
The contribution to reduction of oxygen by ferredoxin (Fd) to the overall reduction of oxygen in isolated pea thylakoids was studied in the presence of Fd versus Fd + NADP(+). The overall rate of electron transport was measured using a determination of Photosystem II quantum yield from chlorophyll fluorescence parameters, and the rate of oxidation of Fd was measured from the light-induced redox changes of Fd. At low light intensity, increasing Fd concentration from 5 to 30 microM in the absence of NADP(+) increased the proportion of oxygen reduction by Fd from 25-35 to 40-60% in different experiments. This proportion decreased with increasing light intensity. When NADP(+) was added in the presence of 15 microM Fd, which was optimal for the NADP(+) reduction rate, the participation of Fd in the reduction of oxygen was low, no more than 10%, and it also decreased with increasing light intensity. At high light intensity, the overall oxygen reduction rates in the presence of Fd + NADP(+) and in the presence of Fd alone were comparable. The significance of reduction of dioxygen either by water-soluble Fd or by the membrane-bound carriers of the photosynthetic electron transport chain for redox signaling under different light intensities is discussed.
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Affiliation(s)
- Marina A Kozuleva
- Institute of Basic Biological Problems, Russian Academy of Sciences, Pushchino, Moscow Region, Russia
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Ptushenko VV, Cherepanov DA, Krishtalik LI, Semenov AY. Semi-continuum electrostatic calculations of redox potentials in photosystem I. PHOTOSYNTHESIS RESEARCH 2008; 97:55-74. [PMID: 18483776 DOI: 10.1007/s11120-008-9309-y] [Citation(s) in RCA: 74] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/01/2007] [Accepted: 04/24/2008] [Indexed: 05/19/2023]
Abstract
The midpoint redox potentials (E(m)) of all cofactors in photosystem I from Synechococcus elongatus as well as of the iron-sulfur (Fe(4)S(4)) clusters in two soluble ferredoxins from Azotobacter vinelandii and Clostridium acidiurici were calculated within the framework of a semi-continuum dielectric approach. The widely used treatment of proteins as uniform media with single dielectric permittivity is oversimplified, particularly, because permanent charges are considered both as a source for intraprotein electric field and as a part of dielectric polarizability. Our approach overcomes this inconsistency by using two dielectric constants: optical epsilon(o)=2.5 for permanent charges pre-existing in crystal structure, and static epsilon(s) for newly formed charges. We also take into account a substantial dielectric heterogeneity of photosystem I revealed by photoelectric measurements and a liquid junction potential correction for E(m) values of relevant redox cofactors measured in aprotic solvents. We show that calculations based on a single permittivity have the discrepancy with experimental data larger than 0.7 V, whereas E(m) values calculated within our approach fall in the range of experimental estimates. The electrostatic analysis combined with quantum chemistry calculations shows that (i) the energy decrease upon chlorophyll dimerization is essential for the downhill mode of primary charge separation between the special pair P(700) and the primary acceptor A(0); (ii) the primary donor is apparently P(700) but not a pair of accessory chlorophylls; (iii) the electron transfer from the A branch quinone Q(A) to the iron-sulfur cluster F(X) is most probably downhill, whereas that from the B branch quinone Q(B) to F(X) is essentially downhill.
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Affiliation(s)
- Vasily V Ptushenko
- A.N.Belozersky Institute of Physical-Chemical Biology, Moscow State University, Moscow, Russia
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11
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Simonson T. Dielectric relaxation in proteins: the computational perspective. PHOTOSYNTHESIS RESEARCH 2008; 97:21-32. [PMID: 18443919 DOI: 10.1007/s11120-008-9293-2] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/08/2007] [Accepted: 02/18/2008] [Indexed: 05/26/2023]
Abstract
In photoexcitation and electron transfer, a new dipole or charge is introduced, and the structure is adjusted. This adjustment represents dielectric relaxation, which is the focus of this review. We concentrate on a few selected topics. We discuss linear response theory, as a unifying framework and a tool to describe non-equilibrium states. We review recent, molecular dynamics simulation studies that illustrate the calculation of dynamic and thermodynamic properties, such as Stokes shifts or reorganization free energies. We then turn to the macroscopic, continuum electrostatic view. We recall the physical definition of a dielectric constant and revisit the decomposition of the free energy into a reorganization and a static term. We review some illustrative continuum studies and discuss some difficulties that can arise with the continuum approach. In conclusion, we consider recent developments that will increase the accuracy and broaden the scope of all these methods.
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Affiliation(s)
- Thomas Simonson
- Laboratoire de Biochimie (UMR CNRS 7654), Department of Biology, Ecole Polytechnique, 91128 Palaiseau, France.
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12
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Pennisi CP, Greenbaum E, Yoshida K. Spatial Distribution of the Electric Potential From Photosystem I Reaction Centers in Lipid Vesicles. IEEE Trans Nanobioscience 2008; 7:164-71. [DOI: 10.1109/tnb.2008.2000748] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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Chamorovsky SK, Cherepanov DA, Chamorovsky CS, Semenov AY. Correlation of electron transfer rate in photosynthetic reaction centers with intraprotein dielectric properties. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS 2007; 1767:441-8. [PMID: 17328862 DOI: 10.1016/j.bbabio.2007.01.008] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/28/2006] [Revised: 12/24/2006] [Accepted: 01/15/2007] [Indexed: 11/20/2022]
Abstract
A number of the electrogenic reactions in photosystem I, photosystem II, and bacterial reaction centers (RC) were comparatively analyzed, and the variation of the dielectric permittivity (epsilon) in the vicinity of electron carriers along the membrane normal was calculated. The value of epsilon was minimal at the core of the complexes and gradually increased towards the periphery. We found that the rate of electron transfer (ET) correlated with the value of the dielectric permittivity: the fastest primary ET reactions occur in the low-polarity core of the complexes within the picosecond time range, whereas slower secondary reactions take place at the high-polarity periphery of the complexes within micro- to millisecond time range. The observed correlation was quantitatively interpreted in the framework of the Marcus theory. We calculated the reorganization energy of ET carriers using their van der Waals volumes and experimentally determined epsilon values. The electronic coupling was calculated by the empirical Moser-Dutton rule for the distance-dependent electron tunneling rate in nonadiabatic ET reactions. We concluded that the local dielectric permittivity inferred from the electrometric measurements could be quantitatively used to estimate the rate constant of ET reactions in membrane proteins with resolved atomic structure with the accuracy of less than one order of magnitude.
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Mamedov MD, Tyunyatkina AA, Siletsky SA, Semenov AY. Voltage changes involving photosystem II quinone–iron complex turnover. EUROPEAN BIOPHYSICS JOURNAL: EBJ 2006; 35:647-54. [PMID: 16708211 DOI: 10.1007/s00249-006-0069-3] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/24/2006] [Revised: 04/10/2006] [Accepted: 04/20/2006] [Indexed: 11/28/2022]
Abstract
An electrometrical technique was used to investigate proton-coupled electron transfer between the primary plastoquinone acceptor Q (A) (-) and the oxidized non-heme iron Fe(3+) on the acceptor side of photosystem II core particles incorporated into phospholipid vesicles. The sign of the transmembrane electric potential difference Deltapsi (negative charging of the proteoliposome interior) indicates that the iron-quinone complex faces the interior surface of the proteoliposome membrane. Preoxidation of the non-heme iron was achieved by addition of potassium ferricyanide entrapped into proteoliposomes. Besides the fast unresolvable kinetic phase (tau approximately 0.1 micro s) of Deltapsi generation related to electron transfer between the redox-active tyrosine Y(Z) and Q(A), an additional phase in the submillisecond time domain (tau approximately 0.1 ms at 23 degrees C, pH 7.0) and relative amplitude approximately 20% of the amplitude of the fast phase was observed under exposure to the first flash. This phase was absent under the second laser flash, as well as upon the first flash in the presence of DCMU, an inhibitor of electron transfer between Q(A) and the secondary quinone Q(B). The rate of the additional electrogenic phase is decreased by about one-half in the presence of D(2)O and is reduced with the temperature decrease. On the basis of the above observations we suggest that the submillisecond electrogenic reaction induced by the first flash is due to the vectorial transfer of a proton from external aqueous phase to an amino acid residue(s) in the vicinity of the non-heme iron. The possible role of the non-heme iron in cyclic electron transfer in photosystem II complex is discussed.
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Affiliation(s)
- M D Mamedov
- A N Belozersky Institute of Physico-Chemical Biology, Moscow State University, 119992, Moscow, Leninskie Gory, Russia.
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Zhao K, Bai W, Mi H. Dielectric spectroscopy of Anabaena 7120 protoplast suspensions. Bioelectrochemistry 2006; 69:49-57. [PMID: 16431165 DOI: 10.1016/j.bioelechem.2005.10.004] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/16/2005] [Revised: 10/19/2005] [Accepted: 10/31/2005] [Indexed: 11/19/2022]
Abstract
The dielectric spectroscopy of Anabaena 7120 protoplast suspensions has been investigated over the frequency range of 40 Hz-110 MHz. The protoplast suspensions showed a complicated dielectric dispersion consisting of at least four distinct sub-dispersions with the increasing frequencies due to the Maxwell-Wagner interfacial polarization. The double-shell model, in which an equivalent shell of thylakoid was assumed inside the cytoplasm, was adopted to describe the special morphology of the protoplast. Under the assumption that the conductivity of plasmalemma was negligible and the conductivity of the equivalent shell was 0.1 microS/cm, we attempted to estimate the dielectric properties of various protoplast components by fitting theoretical curve to experimental data. The relative permittivity of the plasmalemma epsilon(mem) was estimated to be 6.5+/-0.5, and the permittivity of the equivalent shell of thylakoid epsilon(thy) was estimated to be about 3.2+/-0.2. The permittivity epsilon(cyt) and conductivity kappa(cyt) of the cytoplasm were estimated to be 60 and 0.88+/-0.11 mS/cm, respectively. The permittivity epsilon(nuc) and conductivity kappa(nuc) of the nucleoplasmic region were determined to be 100 and 0.13+/-0.02 mS/cm, respectively.
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Affiliation(s)
- Kongshuang Zhao
- Department of Chemistry, Beijing Normal University, 100875, Beijing, China.
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Pennisi CP, Greenbaum E, Yoshida K. Electrostatics of photosynthetic reaction centers in membranes. CONFERENCE PROCEEDINGS : ... ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL CONFERENCE 2006; 2006:4209-4212. [PMID: 17946611 DOI: 10.1109/iembs.2006.260623] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/25/2023]
Abstract
Photosynthetic reaction centers are integral membrane complexes. They have potential application as molecular photovoltaic structures and have been used in diverse technological applications. A three-dimensional electrostatic model of the photosystem I reaction center (PSI) embedded in a lipid membrane is presented. The potential is obtained by solving the Poisson-Boltzmann equation with the finite element method (FEM). Simulations showing the potential distribution in a vesicle containing PSI reaction centers under different conditions are presented. The results of the simulations are compared with previous findings and a possible application of PSI to provide light activation of voltage-gated ion channels is discussed.
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Santabarbara S, Heathcote P, Evans MCW. Modelling of the electron transfer reactions in Photosystem I by electron tunnelling theory: The phylloquinones bound to the PsaA and the PsaB reaction centre subunits of PS I are almost isoenergetic to the iron–sulfur cluster FX. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS 2005; 1708:283-310. [PMID: 15975545 DOI: 10.1016/j.bbabio.2005.05.001] [Citation(s) in RCA: 69] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/27/2004] [Revised: 04/12/2005] [Accepted: 05/03/2005] [Indexed: 10/25/2022]
Abstract
Photosystem I is a large macromolecular complex located in the thylakoid membranes of chloroplasts and in cyanobacteria that catalyses the light driven reduction of ferredoxin and oxidation of plastocyanin. Due to the very negative redox potential of the primary electron transfer cofactors accepting electrons, direct estimation by redox titration of the energetics of the system is hampered. However, the rates of electron transfer reactions are related to the thermodynamic properties of the system. Hence, several spectroscopic and biochemical techniques have been employed, in combination with the classical Marcus theory for electron transfer tunnelling, in order to access these parameters. Nevertheless, the values which have been presented are very variable. In particular, for the case of the tightly bound phylloquinone molecule A(1), the values of the redox potentials reported in the literature vary over a range of about 350 mV. Previous models of Photosystem I have assumed a unidirectional electron transfer model. In the present study, experimental evidence obtained by means of time resolved absorption, photovoltage, and electron paramagnetic resonance measurements are reviewed and analysed in terms of a bi-directional kinetic model for electron transfer reactions. This model takes into consideration the thermodynamic equilibrium between the iron-sulfur centre F(X) and the phylloquinone bound to either the PsaA (A(1A)) or the PsaB (A(1B)) subunit of the reaction centre and the equilibrium between the iron-sulfur centres F(A) and F(B). The experimentally determined decay lifetimes in the range of sub-picosecond to the microsecond time domains can be satisfactorily simulated, taking into consideration the edge-to-edge distances between redox cofactors and driving forces reported in the literature. The only exception to this general behaviour is the case of phylloquinone (A(1)) reoxidation. In order to describe the reported rates of the biphasic decay, of about 20 and 200 ns, associated with this electron transfer step, the redox potentials of the quinones are estimated to be almost isoenergetic with that of the iron sulfur centre F(X). A driving force in the range of 5 to 15 meV is estimated for these reactions, being slightly exergonic in the case of the A(1B) quinone and slightly endergonic, in the case of the A(1A) quinone. The simulation presented in this analysis not only describes the kinetic data obtained for the wild type samples at room temperature and is consistent with estimates of activation energy by the analysis of temperature dependence, but can also explain the effect of the mutations around the PsaB quinone binding pocket. A model of the overall energetics of the system is derived, which suggests that the only substantially irreversible electron transfer reactions are the reoxidation of A(0) on both electron transfer branches and the reduction of F(A) by F(X).
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Affiliation(s)
- Stefano Santabarbara
- School of Biological Sciences, Queen Mary, University of London, Mile End Road, London E1 4NS, UK.
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Chamorovsky CS, Chamorovsky SK, Semenov AY. Dielectric and photoelectric properties of photosynthetic reaction centers. BIOCHEMISTRY. BIOKHIMIIA 2005; 70:257-63. [PMID: 15807667 DOI: 10.1007/s10541-005-0109-0] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/02/2023]
Abstract
A brief review of studies of dielectric and photoelectric properties of photosynthetic reaction centers of purple bacteria as well as photosystem I and photosystem II of cyanobacteria and higher plants is given. A simple kinetic model of the primary processes of electron transfer in photosynthesis is used to discuss possible mechanisms of correlation between rate constant of charge transfer reaction, free energy of electron transition, and effective dielectric constant in the locus of corresponding carriers.
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Affiliation(s)
- C S Chamorovsky
- Belozersky Institute of Physico-Chemical Biology and Department of Biophysics, Faculty of Biology, Lomonosov Moscow State University, Moscow, Russia
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Mori T, Izumi H, Inoue Y. Chiroptical Properties of Organic Radical Cations. The Electronic and Vibrational Circular Dichroism Spectra of α-Tocopherol Derivatives and Sterically Hindered Chiral Hydroquinone Ethers. J Phys Chem A 2004. [DOI: 10.1021/jp0463520] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Tadashi Mori
- Department of Molecular Chemistry, Graduate School of Engineering, Osaka University, 2-1 Yamada-oka, Suita 565-0871, Japan, National Institute of Advanced Industrial Science and Technology (AIST), AIST Tsukuba West, 16-1, Onogawa, Tsukuba, Ibaraki 305-8569, Japan, and Entropy Control Project, ICORP, JST, 4-6-3 Kamishinden, Toyonaka 560-0085, Japan
| | - Hiroshi Izumi
- Department of Molecular Chemistry, Graduate School of Engineering, Osaka University, 2-1 Yamada-oka, Suita 565-0871, Japan, National Institute of Advanced Industrial Science and Technology (AIST), AIST Tsukuba West, 16-1, Onogawa, Tsukuba, Ibaraki 305-8569, Japan, and Entropy Control Project, ICORP, JST, 4-6-3 Kamishinden, Toyonaka 560-0085, Japan
| | - Yoshihisa Inoue
- Department of Molecular Chemistry, Graduate School of Engineering, Osaka University, 2-1 Yamada-oka, Suita 565-0871, Japan, National Institute of Advanced Industrial Science and Technology (AIST), AIST Tsukuba West, 16-1, Onogawa, Tsukuba, Ibaraki 305-8569, Japan, and Entropy Control Project, ICORP, JST, 4-6-3 Kamishinden, Toyonaka 560-0085, Japan
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