Fruiting of hypogeous fungi in dry sclerophyll forest in Tasmania, Australia: seasonal variation and annual production

Primary succession of ectomycorrhizal fungi associated with Alnus sieboldiana on Izu-Oshima Island, Japan

The primary succession of ectomycorrhizal (ECM) fungi has been well described for Pinus and Salix, but the succession for other pioneer hosts is almost unknown. Here, we investigated ECM fungal communities of Alnus sieboldiana at different host growth stages in a primary successional volcanic site on Izu-Oshima Island, Japan. ECM root tips were collected from 120 host individuals, encompassing seedling, sapling, and mature tree stages. The taxonomic identity of the ECM fungi was determined based on rDNA internal transcribed spacer region sequences. Nine molecular taxonomic units were detected from a total of 807 root tips. The initial ECM fungal community on the pioneer seedlings was composed of only three species, where an undescribed Alpova species (Alpova sp.) was exclusively frequent. With host growth, other ECM fungal species were added to the communities, while the initial colonizers remained even at mature tree stages. Thus, the ECM fungal composition significantly changed along host growth stages and showed the nested community structure. Although most of the ECM fungi confirmed in this study had a broad Holarctic geographical distribution, the Alpova sp. had no previous records in other regions. These results suggest that a locally evolved Alpova sp. plays an essential role in the initial seedling establishment of A. sieboldiana at early successional volcanic sites.

Importance of subterranean fungi in the diet of bonobos in Kokolopori

Nonstaple food is a food resource which sole consumption does not allow the maintenance of regular physiological functions, thus constituting a minor portion of an individual's diet. Many primates consume nonstaple food such as meat, insects, and fungi. Hypotheses on the dietary importance of nonstaple food include its role as fallback food and as source of specific nutrients. We tested these two hypotheses by investigating mycophagy (i.e., the consumption of fungi) in a population of wild bonobos in the Kokolopori Bonobo Reserve, DRC. Specifically, we examined the relationship between fungus consumption and various factors relevant to bonobo feeding ecology (i.e., fruit abundance and the consumption of other food types). Additionally, we measured the deviation from linear travel when bonobos searched for fungi to evaluate the nature of fungus consumption (e.g., opportunistic or targeted). Lastly, we examined the nutritional content of the major fungus species consumed (Hysterangium bonobo) to test whether this food item was potentially consumed as source of specific nutrients. We found that bonobos spent a higher proportion of their time feeding on fungi when fruit abundance was higher, indicating that fungi were not consumed as a fallback food. Moreover, bonobos deviated from linear travel when visiting fungus patches more than observed when visiting fruit patches, suggesting that they actively sought out fungi. Lastly, initial analyses suggest that H. bonobo samples contained high concentration of sodium. Collectively, these results suggest that subterranean fungi appear to be attractive food source to Kokolopori bonobos, and that mycophagy may serve to supplement nutrients, like sodium, in bonobo diet.

The effects of weather variability on patterns of genetic diversity in Tasmanian bettongs

While the effects of climate (long-term, prevailing weather) on species abundance, range and genetic diversity have been widely studied, short-term, localized variations in atmospheric conditions (i.e., weather) can also rapidly alter species' geographical ranges and population sizes, but little is known about how they affect genetic diversity. We investigated the relationship between weather and range-wide genetic diversity in a marsupial, Bettongia gaimardi, using dynamic species distribution models (SDMs). Genetic diversity was lower in parts of the range where the weather-based SDM predicted high variability in probability of B. gaimardi occurrence during 1950-2009. This is probably an effect of lower population sizes and extinction-recolonization cycles in places with highly variable weather. Spatial variation in genetic diversity was also better predicted by mean probabilities of B. gaimardi occurrence from weather- than climate-based SDMs. Our results illustrate the importance of weather in driving population dynamics and species distributions on decadal timescales and thereby in affecting genetic diversity. Modelling the links between changing weather patterns, species distributions and genetic diversity will allow researchers to better forecast biological impacts of climate change.

An assessment of ectomycorrhizal fungal communities in Tasmanian temperate high-altitude Eucalyptus delegatensis forest reveals a dominance of the Cortinariaceae

Fungal diversity of Australian eucalypt forests remains underexplored. We investigated the ectomycorrhizal (EcM) fungal community characteristics of declining temperate eucalypt forests in Tasmania. Within this context, we explored the diversity of EcM fungi of two forest types in the northern highlands in the east and west of the island. We hypothesised that EcM fungal community richness and composition would differ between forest type but that the Cortinariaceae would be the dominant family irrespective of forest type. We proposed that EcM richness would be greater in the wet sclerophyll forest than the dry sclerophyll forest type. Using both sporocarps and EcM fungi from root tips amplified by PCR and sequenced in the rDNA ITS region, 175 EcM operational taxonomic units were identified of which 97 belonged to the Cortinariaceae. The Cortinariaceae were the most diverse family, in both the above and below ground communities. Three distinct fungal assemblages occurred within the wet and dry sclerophyll forest types and two geographic regions that were studied, although this pattern did not remain when only the root tip data were analysed. EcM sporocarp richness was unusually higher than root tip richness and EcM richness did not significantly differ among forest types. The results are discussed in relation to the importance of the Cortinariaceae and the drivers of EcM fungal community composition within these forests.

Correlating Mushroom Habitats and Geology in Grevena Prefecture (Greece) with the Use of Geographic Information Systems (GIS)

The aim of this study is to assess the relationship between geological background and habitats of mushrooms. The study area is Grevena, a Prefecture of Greece well known for the great variety of the fungal flora and its distinctive geology. Thematic maps of the study area were produced with the use of GIS, taking under consideration geological formations, elevation, ecosystems and land use. Findings provide evidence that certain mushrooms are more likely to be found in specific ecosystems. The connection between forest ecosystems and the geology of the study area is more apparent, as certain forest types are related with specific geological formations; due to the insignificant presence of grasslands and riverine settings in the study area, it is not possible to assess the role of the geological formation for these mushroom habitats.

Seasonal home range and habitat use of a critically endangered marsupial (Bettongia penicillata ogilbyi) inside and outside a predator-proof sanctuary

An understanding of the factors that influence the distribution of the woylie (Bettongia penicillata ogilbyi) at local and regional scales has been identified as a key knowledge gap, because such knowledge may assist in the recovery of this endangered species. We aimed to investigate the seasonal home-range size and habitat use of woylies to update current knowledge of the species in the context of a substantial decline. Specifically, we examined the home range and habitat use of woylies reintroduced into a sanctuary free from invasive predators and compared these data to those from an external reference site. Eight woylies inside the sanctuary and seven outside were radio-tracked in autumn 2011. The average home-range size was 65.4 (±8.2, s.e.) ha. There was little evidence to suggest any difference in home-range size between woylies inside and outside the sanctuary. Woylies were more likely to be found in the slope and low-lying valley habitats, which have greater water-holding capacity and sandier soils. These relatively large seasonal home ranges, compared with previously published estimates for the species, may be accounted for by low population density, lower seasonal food availability and clustered food distribution. Monitoring the home-range size of woylies within the sanctuary may assist in identifying the carrying capacity of the sanctuary, which has implications for how this population is managed.

Ectomycorrhizal fungal communities associated to Nothofagus species in Northern Patagonia

Ectomycorrhizal fungi constitute an important component of soil biota in Nothofagus forests in Patagonia. However, ectomycorrhizal fungal community is poorly known in this region. Here, we assess biodiversity and community compositions of ectomycorrhizal fungal species associated with Nothofagus dombeyi, N. obliqua and N. alpina. We selected three monospecific Nothofagus forest sites for each species within the boundaries of the Lanin National Park in Northern Patagonia. Ectomycorrhizal fungal species were identified based on morphotyping and rDNA (ITS and 28S rDNA) sequence analysis using both universal and taxon-specific primers. Contrary to previous studies on congeneric host trees, our results showed no significant differences among Nothofagus forest types in terms of fungal biodiversity and community composition. However, altitude had a strong effect on the structure of the ectomycorrhizal fungal community associated with Nothofagus spp.

Climate-driven variation in food availability between the core and range edge of the endangered northern bettong (Bettongia tropica)

The endangered northern bettong (Bettongia tropica) occurs in four disjunct populations in far north Queensland, Australia, at a high density only in its range core (RC). A recent study suggested that B. tropica populations are sparse at the northern and southern range edges (SRE) due to more severe droughts and variable climatic conditions causing fluctuations in the availability of their principal food resource, truffle-like fungi. Truffle availability in the Australian tropics is affected by climate, specifically seasonality of precipitation. We aimed to determine whether the differences in weather patterns between the RC and SRE could be translated to actual differences in truffle availability. Truffle density was consistently lower on the SRE although biomass was slightly higher there due to dominance by drought-tolerant truffle taxa that produce few but large truffles. Lower densities of truffles on the SRE could explain why B. tropica is also less abundant there and why they may be less resilient to competition from the more generalist rufous bettong (Aepyprymnus rufescens). Increasing temperatures and, more importantly, harsher droughts predicted for this region as a result of climate change, may have further detrimental impacts on truffle availability and thus population densities of B. tropica and other mycophagous species.

Heading for greener pastures? Defining the foraging preferences of urban long-nosed bandicoots

The impact of urbanisation is delayed for many species, as populations that manage to survive the initial loss of habitat gradually decline throughout the urban–bushland mosaic. Yet many species’ chances of persistence within urban areas can be increased through relatively simple management techniques, and an understanding of how remnant populations use the interface between urban and natural landscapes is therefore crucial to their long-term management. Here we examine the habitat preferences of a semi-urban population of long-nosed bandicoots (Perameles nasuta) that inhabits a matrix of urban open lawn and dense native heath macrohabitats. We radio-tracked animals in these two distinct macrohabitats and compared the microhabitat features between core and peripheral areas of home ranges. Core and peripheral areas did not differ in their characteristics for either macrohabitat; however, individuals showed a high level of fidelity to distinct foraging patches. We then related microhabitat features to an index of foraging activity using generalised linear modelling and found that diggings were more abundant in areas with moist, soft soils close to cover. Soil softness and moisture were experimentally increased via artificial watering on selected sites. After only 10 days there were significantly more diggings on watered than non-watered sites. Thus, bandicoots appear to be a matrix-sensitive species, using some open grass areas of the matrix but requiring the vegetation cover of remnant bush. We suggest, however, that artificial watering and additional cover may be one way to increase foraging opportunities to make this, and other semi-urban, populations matrix-occupying, and thus facilitate bandicoot persistence in the urban mosaic.

Phenology of epigeous macrofungi found in red gum woodlands

The timing of fruiting body production by epigeous macrofungi is thought to be mostly determined by substrate moisture and temperature. Understanding the environmental cues that influence fruiting can help when designing surveys, interpreting results, and predicting effects of an altered climate. Species fruiting in 22 river red gum (Eucalyptus camaldulensis) woodland sites in southeastern Australia was recorded at regular intervals over 2 y. Models were constructed to explain the phenology of 25 of the most common species, as well as the total number of species found fruiting on each survey occasion. We found that rainfall minus evaporation and the time of year each influenced fruiting of the common fungi, but to varying degrees depending on species. Using these same variables, the model predictions for the total number of species expected to be found on each survey occasion fit the observations reasonably well (R(2)=0.49). The models could be used to estimate the probability of presence for species of conservation interest, to optimise survey timing, or to predict effects of climate change on fruiting.

Gymnomyces xerophilus sp. nov. (sequestrate Russulaceae), an ectomycorrhizal associate of Quercus in California

Gymnomyces xerophilus sp. nov., a sequestrate species in the Russulaceae, is characterized and described morphologically as a new species from Quercus-dominated woodlands in California. ITS sequences recovered from healthy, ectomycorrhizal roots of Quercus douglasii and Q. wislizeni matched those of G. xerophilus basidiomata, confirming the ectomycorrhizal status of this fungus. Phylogenetic analysis of the ITS region places G. xerophilus in a clade with both agaricoid (Russula in the section Polychromae) and sequestrate (Gymnomyces, Cystangium) relatives. We include a dichotomous key to the species of Gymnomyces associated with Quercus.

Fire-related changes in biomass of hypogeous sporocarps at foraging points used by a tropical mycophagous marsupial

Changes in pre- and post-fire biomass of hypogeous fungal sporocarps remaining at locations where an endangered mycophagous marsupial, the northern bettong (Bettongia tropica), had foraged, were assessed in fire-prone sclerophyll forest in northeastern Australia. Low to medium intensity experimental fires were set during the late dry season in 1995 and 1996 and post-foraging biomass of sporocarps (expressed as biomass of sporocarps remaining at recent B. tropica diggings) was measured at unburnt and burnt sites at approximately six-week intervals for a period of 14 months. Post-foraging biomass was significantly higher at burnt sites immediately following fire compared with control sites, solely due to increased biomass of hypogeous species belonging to the family Mesophelliaceae. Several months after fire, post-foraging biomass was significantly higher on unburnt sites compared with very low biomass on burnt sites. Twelve months after fire, the biomass on burnt and unburnt sites was not significantly different, having returned to biomass observed pre-fire. All evidence points toward mesophellioid fungi being greatly more available to bettongs on recently burnt ground, but fire may make several other sporocarp taxa considerably less available several months following fire.

Ectomycorrhizal fungal communities in an Abies firma forest, with special reference to ectomycorrhizal associations between seedlings and mature trees

Ectomycorrhizal fungal communities of both seedlings and mature trees of Abies firma Sieb. et Zucc. were studied based on morphological and molecular analyses of ectomycorrhizal (ECM) roots. A total of 142 seedlings and 28 soil cores were collected from a 10 m × 30 m plot, and 37 morphotypes were recorded from seedlings and 23 from mature trees. A morphotype, type 21, formed by an unidentified fungus that is likely a Russula species, was dominant on both seedlings (30% of the total number of the ECM roots detected) and mature trees (56%) and overlapped them spatially, suggesting a hyphal linkage between mature trees and seedlings in the plot. A total of 12 morphotypes were recorded from soil blocks underneath fruiting bodies of undescribed Russula sp. 1, the dominant aboveground fruiting body in the plot, among which type 21 was the most abundant. The pattern of restriction fragment length polymorphism of this type was identical to that of the fruiting body of Russula sp. 1. These results indicate that Russula sp. 1 was the dominant ECM fungus associated with both mature trees and seedlings and would play an important role in the dynamics and maintenance of this Abies-dominated forest site.Key words: Abies firma, ectomycorrhizal fungal community, morphotype, PCR-RFLP analysis, tree age.