Homodimeric monomethine cyanine dyes as fluorescent probes of biopolymers

DNA and BSA binding, anticancer and antimicrobial properties of Co(ii), Co(ii/iii), Cu(ii) and Ag(i) complexes of arylhydrazones of barbituric acid

Novel arylhydrazones of barbituric acid were synthesized and their water soluble Ag^I, Co^II, Co^II/III and Cu^II complexes obtained. The Ag^I compound shows remarkable cytotoxic and antibacterial activity.

Fluorescence quenching of bovine serum albumin by NNMB

A new type of fluorophore 2-(naphthalen-1-yl)-1-((naphthalen-1-yl)methyl)-1H-benzimidazole (NNMB) has been prepared and characterized by (1)H NMR, (13)C NMR, mass and IR spectral analysis. Absorption, fluorescence and synchronous fluorescence spectral studies have been made for the mutual interaction of NNMB with bovine serum albumin (BSA). Absorption spectroscopy proved the formation of a ground state BSA…NNMB complex. Fluorescence spectrum of BSA in the presence of NNMB clearly shows that NNMB acts as a quencher. Based on the theory of Forester's non-radiation energy transfer (FRET) binding distance has been deduced. The Stern-Volmer quenching constant (KSV), binding site number (n), apparent binding constant (KA) and corresponding thermodynamic parameters (ΔG, ΔH and ΔS) were determined.

Telore R, Sekar N. Synthesis of novel fluorescent 1,3,5-trisubstituted triazine derivatives and photophysical property evaluation of fluorophores and their BSA conjugates

Cyanuric chloride was allowed to react with

Study on synthesis and spectrum of novel styryl cyanine dyes with a carbazole bridged chain

Based on the frequently-used cyanine dye probe thiazole orange (TO), a novel kind of cyanine dye was designed and synthesized. Carbazole was inserted into the methylidyne structure of TO as a bridge to afford a kind of novel styryl cyanine dye with carbazole bridged chain. The dyes were characterized by HNMR and MS. The spectra of the novel dyes were also studied and the results showed that the fluorescent wavelength of novel carbzole dye shifted red for 100 nm, stock shift increased by 70 nm and the fluorescent intensity enhanced by 70 times compared to that of TO. When the novel dye was labeled by BSA, its fluorescent wavelength changed little and the intensity enhanced. It is indicated that it can be used as an excellent fluorescent probe in biological labeling.

Effect of nano-clay platelets on the J-aggregation of thiacyanine dye organized in Langmuir-Blodgett films: a spectroscopic investigation

In this paper we report the effect of the incorporation of nano-dimensional clay platelets, laponite, on the J-aggregation of a thiacyanine dye N,N'-dioctadecyl thiacyanine perchlorate (NK) assembled into Langmuir-Blodgett (LB) monolayers. pi-A isotherms and atomic force microscopic studies confirm the successful incorporation of clay platelets into the Langmuir monolayer of NK. J-aggregates of NK remain present in LB films lifted at lower as well as higher surface pressures in the absence of laponite clay platelets. However, with the incorporation of clay platelets, J-aggregates are formed only in LB films lifted at higher surface pressure of 30 mN/m and totally absent in the films lifted at lower surface pressures of 10 and 15 mN/m. This may be due to the formation of nano-trapping level by overlapping of clay platelets at higher surface pressure. NK molecules may get squeezed to these nano-trapping to form J-aggregates.

Langmuir-Blodgett monolayers of cationic dyes in the presence and absence of clay mineral layers: N,N'-dioctadecyl thiacyanine, octadecyl rhodamine B and laponite

Langmuir-Blodgett (LB) films of N,N'-dioctadecyl thiacyanine perchlorate (TC18) and octadecyl rhodamine B chloride (RhB18) and their mixtures in the presence and absence of clay mineral layers were investigated by recording surface pressure-area (pi-A) isotherms and by UV-vis and fluorescence spectroscopies. The pi-A isotherms of TC18, RhB18, and their mixtures are characteristic of liquid expanded state behavior with repulsive interactions between the two cationic dyes. In the presence of laponite, the pi-A isotherms show liquid expanded and condensed-state behavior. In laponite dispersions and in monolayers, TC18 has a strong tendency to aggregate with formation of H- and J- aggregates. The absorption and fluorescence maxima of the monomers in the films are at 435 nm and at 480 nm; H-dimers have an absorption maximum around 410 nm and do not fluoresce. J-dimers are present in all the films with absorption maximum at 461 nm and fluorescence at 463 nm. RhB18 is mainly present as monomers in the LB films with an absorption maximum at 576 nm and fluorescence at 595 nm. Fluorescence resonance energy transfer from TC18 to RhB18 has been observed in clay dispersions and in films with and without laponite. The optimum condition for TC18 --> RhB18 fluorescence energy transfer in the films is 90 mol % TC18 + 10 mol % RhB18.

Solid-Phase Synthesis and Modification of Thiazole Orange and Its Derivatives and their Spectral Properties

A new solid-phase synthesis is shown to be effective in the preparation of cyanine dye Thiazole Orange (TO) and its derivatives, which can be obtained as a traceless cleavage of the Merrifield resin method. The influence of different solvents, substitutional groups, introduced to benzothiazole such as chlorine, methyl, and nitro was extensively studied. The changes of the special characteristic and fluorescence intensity of the TO derivatives were described. The phenomenon of the synergetic effect was also depicted after modifying the TO molecule with chitosan oligosaccharide (CTS) at the end of the alkyl, which can effectively improve the sensitivity of the fluorescent probe.

New hexamethine–hemicyanine dyes for the development of integrated optochemical sensors

New far-visible absorbing anilino-cyanine dyes have been synthesised for future application as chromoionophores in integrated waveguide absorbance optodes based on bulk optodes. The effect of the heterocycle, of the substitution of the heterocyclic nitrogen and of the type of heptamethine central ring on the pKa values (4.3-8.2 in ethanol-water solutions and 9.5-11.0 in plasticised PVC membranes), on the spectroscopic characteristics of the dye and on photostability is discussed. pH-selective bulk optodes have been formulated as a first approach to develop ion-selective optodes, and sensitivity, repeatability, lifetime and response time have been determined. The dyes show good analytical behaviour for use as chromoionophores for the development of ion-selective optodes. Reversible (80-87%), fast (tr90%=0.94-2.28 min) and pH-sensitive membranes (slopes of 0.09-0.23 DeltaAbs.pHdec-1, absorbance range 0.19-0.53) have been obtained. Moreover, they exhibit good spectroscopic features for employment with integrated optochemical sensors: absorption maxima of the acidic species in plasticised PVC membranes matched those of 650-670-nm LEDs, high molar absorption coefficients (epsilonacidic=3.5x10(4)-9.3x10(4) L mol-1 cm-1 and epsilonbasic=1.9x10(4)-6.7x10(4) L mol-1 cm-1) and fluorescence.

Complexation of polymethine dyes with human serum albumin: a spectroscopic study

Non-covalent interactions between polymethine dyes of various types (cationic and anionic thiacarbocyanines as well as anionic oxonols and tetracyanopolymethines) and human serum albumin (HSA) were studied by means of absorption, fluorescence and circular dichroism (CD) spectroscopies. Complexation with the protein leads to a red shift of the dye absorption spectra and, in most cases, to a growth of the fluorescence quantum yield (Phif; for oxonols this growth is very small). The binding constants (K) obtained from changing the absorption spectra and Phif vary from 10(4) to (5-6) x 10(7) M(-1). K for the anionic dyes is much higher than for the cationic dyes (the highest K was found for oxonols). Interaction of meso-substituted anionic thiacarbocyanines with HSA results in cis-->trans isomerization and, as a consequence, an appearance and a steep rise of dye fluorescence. Binding to HSA gives rise to dye CD signals and in many cases is accompanied by aggregation of the dyes. These aggregates often exhibit biphasic CD spectra. The aggregates formed by the dyes alone are decomposed in the presence of HSA.

Radiative decay engineering: the role of photonic mode density in biotechnology

Fluorescence detection is a central technology in biological research and biotechnology. A vast array of fluorescent probes are available with diverse spectral properties. These properties were 'engineered' into fluorophores by modification of the chemical structures. Essentially, all present uses of fluorescence rely on the radiation of energy into optically transparent media, the free space which surrounds the fluorophores. In this paper, we summarize an opportunity for novel fluorescence technology based on modification of the photonic mode density around the fluorophore and thus control of its spectral properties. This modification can be accomplished by proximity of fluorophores to metallic particles of gold, silver and possibly others. By engineering the size and shape of the metal particles, and the location of the fluorophores relative to the surfaces, fluorophores can be quenched, display increases in quantum yield, and changes in lifetime. Fluorophore-metal surface combinations can even display directional rather than isotropic emission. We describe recent experimental results and suggest potential biomedical applications of fluorophore-metal particle interactions.

Photophysics and photochemistry of hydrophilic cyanine dyes in normal and reverse micelles

The photophysical and photochemical properties of the negatively charged hydrophilic cyanine dyes 1-3 were studied in isooctane/sodium bis(2-ethylhexyl) sulfosuccinate (AOT)/water and cyclohexane-hexanol/Triton X-100 (TX100)/water reverse micelles and in aqueous solutions in the presence of surfactants. In spite of the opposite total charges, 2 and its structural analog, cationic 3,3'-diethylthiacarbocyanine (DTC), show similar photophysical and photochemical behaviour in AOT reverse micelles. However, in normal micelles their photophysical properties are quite different: 2 exhibits unusual behaviour [a sharp increase in the fluorescence quantum yield (phif) in the presence of both cationic and anionic micelles, but very small changes with neutral TX100], whereas the behaviour of DTC is normal. The phif values of 1-3 in AOT reverse micelles suffer a steep drop when w0 increases from 0 to 10 (w0 = [H2O]/[AOT]) and remain essentially constant at higher w0, while in TX100 reverse micelles the phif values undergo small variations with w0. A decrease in the photoisomerization quantum yield, and a rise in phif in S1 --> T intersystem crossing, in the back isomerization activation energy and in the preexponential factor were found for 1-3 in AOT reverse micelles with small w0. The unusual behaviour of 1-3 in micelles is attributed to the bipolar structure of the dyes.