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Ghorai T, Sarkar A, Roy A, Bhowmick B, Nayak D, Das S. Role of auto-antibodies in the mechanisms of dengue pathogenesis and its progression: a comprehensive review. Arch Microbiol 2024; 206:214. [PMID: 38616229 DOI: 10.1007/s00203-024-03954-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/01/2024] [Revised: 03/27/2024] [Accepted: 04/02/2024] [Indexed: 04/16/2024]
Abstract
A complex interaction among virulence factors, host-genes and host immune system is considered to be responsible for dengue virus (DENV) infection and disease progression. Generation of auto-antibodies during DENV infection is a major phenomenon that plays a role in the pathophysiology of dengue hemorrhagic fever and dengue shock syndrome. Hemostasis, thrombocytopenia, hepatic endothelial dysfunction, and autoimmune blistering skin disease (pemphigus) are different clinical manifestations of dengue pathogenesis; produced due to the molecular mimicry of DENV proteins with self-antigens like coagulation factors, platelets and endothelial cell proteins. This review elaborately describes the current advancements in auto-antibody-mediated immunopathogenesis which inhibits coagulation cascade and promotes hyperfibrinolysis. Auto-antibodies like anti-endothelial cell antibodies-mediated hepatic inflammation during severe DENV infection have also been discussed. Overall, this comprehensive review provides insight to target auto-antibodies that may act as potential biomarkers for disease severity, and a ground for the development of therapeutic strategy against DENV.
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Affiliation(s)
- Tanusree Ghorai
- Virology Laboratory, DAC Regional Research Institute, Kolkata, India
| | - Avipsha Sarkar
- Virology Laboratory, DAC Regional Research Institute, Kolkata, India
| | - Anirban Roy
- Virology Laboratory, DAC Regional Research Institute, Kolkata, India
| | - Bijita Bhowmick
- Virology Laboratory, DAC Regional Research Institute, Kolkata, India
| | | | - Satadal Das
- Virology Laboratory, DAC Regional Research Institute, Kolkata, India.
- Peerless Hospital and B.K. Roy Research Centre, Kolkata, India.
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Sugeno M, Kawazu EC, Kim H, Banouvong V, Pehlivan N, Gilfillan D, Kim H, Kim Y. Association between environmental factors and dengue incidence in Lao People's Democratic Republic: a nationwide time-series study. BMC Public Health 2023; 23:2348. [PMID: 38012549 PMCID: PMC10683213 DOI: 10.1186/s12889-023-17277-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/20/2023] [Accepted: 11/20/2023] [Indexed: 11/29/2023] Open
Abstract
BACKGROUND Dengue fever is a vector-borne disease of global public health concern, with an increasing number of cases and a widening area of endemicity in recent years. Meteorological factors influence dengue transmission. This study aimed to estimate the association between meteorological factors (i.e., temperature and rainfall) and dengue incidence and the effect of altitude on this association in the Lao People's Democratic Republic (Lao PDR). METHODS We used weekly dengue incidence and meteorological data, including temperature and rainfall, from 18 jurisdictions in Lao PDR from 2015 to 2019. A two-stage distributed lag nonlinear model with a quasi-Poisson distribution was used to account for the nonlinear and delayed associations between dengue incidence and meteorological variables, adjusting for long-term time trends and autocorrelation. RESULTS A total of 55,561 cases were reported in Lao PDR from 2015 to 2019. The cumulative relative risk for the 90th percentile of weekly mean temperature (29 °C) over 22 weeks was estimated at 4.21 (95% confidence interval: 2.00-8.84), relative to the 25th percentile (24 °C). The cumulative relative risk for the weekly total rainfall over 12 weeks peaked at 82 mm (relative risk = 1.76, 95% confidence interval: 0.91-3.40) relative to no rain. However, the risk decreased significantly when heavy rain exceeded 200 mm. We found no evidence that altitude modified these associations. CONCLUSIONS We found a lagged nonlinear relationship between meteorological factors and dengue incidence in Lao PDR. These findings can be used to develop climate-based early warning systems and provide insights for improving vector control in the country.
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Affiliation(s)
- Masumi Sugeno
- Department of Global Environmental Health, Graduate School of Medicine, The University of Tokyo, 7-3-1 Hongo, Bunkyo-Ku, Tokyo, 113-0033, Japan
| | - Erin C Kawazu
- Institute for Global Environmental Strategies, Hayama, Japan
| | - Hyun Kim
- School of Public Health, University of Minnesota Twin Cities, Minneapolis, USA
| | - Virasack Banouvong
- Lao PDR Centre for Malariology, Parasitology and Entomology, Vientiane Capital, Lao People's Democratic Republic
| | - Nazife Pehlivan
- Graduate School of Public Health, Seoul National University, 1 Gwanak-Ro, Gwanak-Gu, Seoul, 151-742, South Korea
| | - Daniel Gilfillan
- Fenner School of Environment and Society, Australian National University, Australian Capital Territory, Canberra, Australia
| | - Ho Kim
- Graduate School of Public Health, Seoul National University, 1 Gwanak-Ro, Gwanak-Gu, Seoul, 151-742, South Korea.
| | - Yoonhee Kim
- Department of Global Environmental Health, Graduate School of Medicine, The University of Tokyo, 7-3-1 Hongo, Bunkyo-Ku, Tokyo, 113-0033, Japan.
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Servadio JL, Convertino M, Fiecas M, Muñoz‐Zanzi C. Weekly Forecasting of Yellow Fever Occurrence and Incidence via Eco-Meteorological Dynamics. GEOHEALTH 2023; 7:e2023GH000870. [PMID: 37885914 PMCID: PMC10599710 DOI: 10.1029/2023gh000870] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/27/2023] [Revised: 08/31/2023] [Accepted: 10/11/2023] [Indexed: 10/28/2023]
Abstract
Yellow Fever (YF), a mosquito-borne disease, requires ongoing surveillance and prevention due to its persistence and ability to cause major epidemics, including one that began in Brazil in 2016. Forecasting based on factors influencing YF risk can improve efficiency in prevention. This study aimed to produce weekly forecasts of YF occurrence and incidence in Brazil using weekly meteorological and ecohydrological conditions. Occurrence was forecast as the probability of observing any cases, and incidence was forecast to represent morbidity if YF occurs. We fit gamma hurdle models, selecting predictors from several meteorological and ecohydrological factors, based on forecast accuracy defined by receiver operator characteristic curves and mean absolute error. We fit separate models for data before and after the start of the 2016 outbreak, forecasting occurrence and incidence for all municipalities of Brazil weekly. Different predictor sets were found to produce most accurate forecasts in each time period, and forecast accuracy was high for both time periods. Temperature, precipitation, and previous YF burden were most influential predictors among models. Minimum, maximum, mean, and range of weekly temperature, precipitation, and humidity contributed to forecasts, with optimal lag times of 2, 6, and 7 weeks depending on time period. Results from this study show the use of environmental predictors in providing regular forecasts of YF burden and producing nationwide forecasts. Weekly forecasts, which can be produced using the forecast model developed in this study, are beneficial for informing immediate preparedness measures.
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Affiliation(s)
- Joseph L. Servadio
- Department of BiologyCenter for Infectious Disease DynamicsPennsylvania State UniversityUniversity ParkPAUSA
- Division of Environmental Health SciencesSchool of Public HealthUniversity of MinnesotaMinneapolisMNUSA
| | | | - Mark Fiecas
- Division of BiostatisticsSchool of Public HealthUniversity of MinnesotaMinneapolisMNUSA
| | - Claudia Muñoz‐Zanzi
- Division of Environmental Health SciencesSchool of Public HealthUniversity of MinnesotaMinneapolisMNUSA
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Mustafa Z, Khan HM, Azam M, Sami H, Ali SG, Ahmad I, Raza A, Khan MA. Insight into the seroepidemiology and dynamics of circulating serotypes of dengue virus over a 4 year period in western Uttar Pradesh, India. Access Microbiol 2023; 5:acmi000567.v4. [PMID: 37424567 PMCID: PMC10323805 DOI: 10.1099/acmi.0.000567.v4] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/19/2023] [Accepted: 05/30/2023] [Indexed: 07/11/2023] Open
Abstract
An important public health problem in India is dengue infection, with every year seeing an increase in cases of dengue fever. Dengue affects all individuals irrespective of their gender and age, although the infection rate is higher among males and younger people. Despite low severity in general, dengue virus can cause severe health conditions in some individuals. Genetic characterization of circulating endemic dengue virus (DENV) serotypes plays a significant role in providing epidemiological knowledge and subsequent vaccine development. In the present study, over a 4 year period, we assessed DENV transmission dynamics in major regions of western Uttar Pradesh in North India. ELISA tests were used to diagnose dengue, and PCRs were used to determine the circulating serotype. We found that dengue infection peaks after the rainy season and affects all sexes and ages. A total of 1277 individuals were found positive for dengue; among them, 61.7 % were male and 38.3 % were female. DEN-1 was found in 23.12 %, DEN-2 in 45 %, DEN-3 in 29.06 % and DEN-4 in 1.5 % of the dengue-infected individuals. All four DENV serotypes were circulating in the study area, and DENV serotype-2 (DEN-2) was the most prevalent serotype.
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Affiliation(s)
- Zeeshan Mustafa
- Department of Microbiology, J.N. Medical College, Aligarh Muslim University, Aligarh, UP, India
| | - Haris Manzoor Khan
- Department of Microbiology, J.N. Medical College, Aligarh Muslim University, Aligarh, UP, India
| | - Mohd Azam
- College of Applied Medical Sciences, Al-Qassim University, Buraydah, Qassim KSA, Saudi Arabia
| | - Hiba Sami
- Department of Microbiology, J.N. Medical College, Aligarh Muslim University, Aligarh, UP, India
| | - Syed Ghazanfar Ali
- Viral Research & Diagnostic Laboratory, Department of Microbiology, J.N. Medical College, Aligarh Muslim University, Aligarh, UP, India
| | - Islam Ahmad
- Viral Research & Diagnostic Laboratory, Department of Microbiology, J.N. Medical College, Aligarh Muslim University, Aligarh, UP, India
| | - Adil Raza
- Department of Microbiology, J.N. Medical College, Aligarh Muslim University, Aligarh, UP, India
| | - Mohammad Azam Khan
- Department of Statistics & Operational Research, Aligarh Muslim University, Aligarh, UP, India
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Saeed A, Ali S, Khan F, Muhammad S, Reboita MS, Khan AW, Goheer MA, Khan MA, Kumar R, Ikram A, Jabeen A, Pongpanich S. Modelling the impact of climate change on dengue outbreaks and future spatiotemporal shift in Pakistan. ENVIRONMENTAL GEOCHEMISTRY AND HEALTH 2023; 45:3489-3505. [PMID: 36367603 DOI: 10.1007/s10653-022-01429-z] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/28/2022] [Accepted: 10/31/2022] [Indexed: 06/01/2023]
Abstract
Climate change has a significant impact on the intensity and spread of dengue outbreaks. The objective of this study is to assess the number of dengue transmission suitable days (DTSD) in Pakistan for the baseline (1976-2005) and future (2006-2035, 2041-2070, and 2071-2099) periods under Representative Concentration Pathway (RCP4.5 and RCP8.5) scenarios. Moreover, potential spatiotemporal shift and future hotspots of DTSD due to climate change were also identified. The analysis is based on fourteen CMIP5 models that have been downscaled and bias-corrected with quantile delta mapping technique, which addresses data stationarity constraints while preserving future climate signal. The results show a higher DTSD during the monsoon season in the baseline in the study area except for Sindh (SN) and South Punjab (SP). In future periods, there is a temporal shift (extension) towards pre- and post-monsoon. During the baseline period, the top ten hotspot cities with a higher frequency of DTSD are Karachi, Hyderabad, Sialkot, Jhelum, Lahore, Islamabad, Balakot, Peshawar, Kohat, and Faisalabad. However, as a result of climate change, there is an elevation-dependent shift in DTSD to high-altitude cities, e.g. in the 2020s, Kotli, Muzaffarabad, and Drosh; in the 2050s, Garhi Dopatta, Quetta, and Zhob; and in the 2080s, Chitral and Bunji. Karachi, Islamabad, and Balakot will remain highly vulnerable to dengue outbreaks for all the future periods of the twenty-first century. Our findings also indicate that DTSD would spread across Pakistan, particularly in areas where we have never seen dengue infections previously. The good news is that the DTSD in current hotspot cities is projected to decrease in the future due to climate change. There is also a temporal shift in the region during the post- and pre-monsoon season, which provides suitable breeding conditions for dengue mosquitos due to freshwater; therefore, local authorities need to take adaption and mitigation actions.
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Affiliation(s)
- Alia Saeed
- Health Services Academy, Islamabad, Pakistan
| | - Shaukat Ali
- Global Change Impact Studies Centre (GCISC), Ministry of Climate Change, Islamabad, Pakistan
| | - Firdos Khan
- School of Natural Sciences (SNS), National University of Sciences and Technology (NUST), Islamabad, Pakistan
| | - Sher Muhammad
- International Centre for Integrated Mountain Development (ICIMOD), Kathmandu, Nepal
| | | | | | - Muhammad Arif Goheer
- Global Change Impact Studies Centre (GCISC), Ministry of Climate Change, Islamabad, Pakistan
| | | | - Ramesh Kumar
- Health Services Academy, Islamabad, Pakistan.
- College of Public Health Sciences, Chulalongkorn University, Bangkok, Thailand.
| | - Aamer Ikram
- National Institute of Health, Islamabad, Pakistan
| | - Aliya Jabeen
- National Institute of Health, Islamabad, Pakistan
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Damtew YT, Tong M, Varghese BM, Anikeeva O, Hansen A, Dear K, Zhang Y, Morgan G, Driscoll T, Capon T, Bi P. Effects of high temperatures and heatwaves on dengue fever: a systematic review and meta-analysis. EBioMedicine 2023; 91:104582. [PMID: 37088034 PMCID: PMC10149186 DOI: 10.1016/j.ebiom.2023.104582] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/06/2023] [Revised: 04/03/2023] [Accepted: 04/06/2023] [Indexed: 04/25/2023] Open
Abstract
BACKGROUND Studies have shown that dengue virus transmission increases in association with ambient temperature. We performed a systematic review and meta-analysis to assess the effect of both high temperatures and heatwave events on dengue transmission in different climate zones globally. METHODS A systematic literature search was conducted in PubMed, Scopus, Embase, and Web of Science from January 1990 to September 20, 2022. We included peer reviewed original observational studies using ecological time series, case crossover, or case series study designs reporting the association of high temperatures and heatwave with dengue and comparing risks over different exposures or time periods. Studies classified as case reports, clinical trials, non-human studies, conference abstracts, editorials, reviews, books, posters, commentaries; and studies that examined only seasonal effects were excluded. Effect estimates were extracted from published literature. A random effects meta-analysis was performed to pool the relative risks (RRs) of dengue infection per 1 °C increase in temperature, and further subgroup analyses were also conducted. The quality and strength of evidence were evaluated following the Navigation Guide systematic review methodology framework. The review protocol has been registered in the International Prospective Register of Systematic Reviews (PROSPERO). FINDINGS The study selection process yielded 6367 studies. A total of 106 studies covering more than four million dengue cases fulfilled the inclusion criteria; of these, 54 studies were eligible for meta-analysis. The overall pooled estimate showed a 13% increase in risk of dengue infection (RR = 1.13; 95% confidence interval (CI): 1.11-1.16, I2 = 98.0%) for each 1 °C increase in high temperatures. Subgroup analyses by climate zones suggested greater effects of temperature in tropical monsoon climate zone (RR = 1.29, 95% CI: 1.11-1.51) and humid subtropical climate zone (RR = 1.20, 95% CI: 1.15-1.25). Heatwave events showed association with an increased risk of dengue infection (RR = 1.08; 95% CI: 0.95-1.23, I2 = 88.9%), despite a wide confidence interval. The overall strength of evidence was found to be "sufficient" for high temperatures but "limited" for heatwaves. Our results showed that high temperatures increased the risk of dengue infection, albeit with varying risks across climate zones and different levels of national income. INTERPRETATION High temperatures increased the relative risk of dengue infection. Future studies on the association between temperature and dengue infection should consider local and regional climate, socio-demographic and environmental characteristics to explore vulnerability at local and regional levels for tailored prevention. FUNDING Australian Research Council Discovery Program.
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Affiliation(s)
- Yohannes Tefera Damtew
- School of Public Health, The University of Adelaide, Adelaide, South Australia, 5005, Australia; College of Health and Medical Sciences, Haramaya University, P.O.BOX 138, Dire Dawa, Ethiopia.
| | - Michael Tong
- National Centre for Epidemiology and Population Health, ANU College of Health and Medicine, The Australian National University, Canberra ACT, 2601, Australia.
| | - Blesson Mathew Varghese
- School of Public Health, The University of Adelaide, Adelaide, South Australia, 5005, Australia.
| | - Olga Anikeeva
- School of Public Health, The University of Adelaide, Adelaide, South Australia, 5005, Australia.
| | - Alana Hansen
- School of Public Health, The University of Adelaide, Adelaide, South Australia, 5005, Australia.
| | - Keith Dear
- School of Public Health, The University of Adelaide, Adelaide, South Australia, 5005, Australia.
| | - Ying Zhang
- School of Public Health, Faculty of Medicine and Health, The University of Sydney, New South Wales, 2006, Australia.
| | - Geoffrey Morgan
- School of Public Health, Faculty of Medicine and Health, The University of Sydney, New South Wales, 2006, Australia.
| | - Tim Driscoll
- School of Public Health, Faculty of Medicine and Health, The University of Sydney, New South Wales, 2006, Australia.
| | - Tony Capon
- Monash Sustainable Development Institute, Monash University, Melbourne, Victoria, Australia.
| | - Peng Bi
- School of Public Health, The University of Adelaide, Adelaide, South Australia, 5005, Australia.
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Liu H, Huang X, Guo X, Cheng P, Wang H, Liu L, Zang C, Zhang C, Wang X, Zhou G, Gong M. Climate change and Aedes albopictus risks in China: current impact and future projection. Infect Dis Poverty 2023; 12:26. [PMID: 36964611 PMCID: PMC10037799 DOI: 10.1186/s40249-023-01083-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/11/2022] [Accepted: 03/14/2023] [Indexed: 03/26/2023] Open
Abstract
BACKGROUND Future distribution of dengue risk is usually predicted based on predicted climate changes using general circulation models (GCMs). However, it is difficult to validate the GCM results and assess the uncertainty of the predictions. The observed changes in climate may be very different from the GCM results. We aim to utilize trends in observed climate dynamics to predict future risks of Aedes albopictus in China. METHODS We collected Ae. albopictus surveillance data and observed climate records from 80 meteorological stations from 1970 to 2021. We analyzed the trends in climate change in China and made predictions on future climate for the years 2050 and 2080 based on trend analyses. We analyzed the relationship between climatic variables and the prevalence of Ae. albopictus in different months/seasons. We built a classification tree model (based on the average of 999 runs of classification and regression tree analyses) to predict the monthly/seasonal Ae. albopictus distribution based on the average climate from 1970 to 2000 and assessed the contributions of different climatic variables to the Ae. albopictus distribution. Using these models, we projected the future distributions of Ae. albopictus for 2050 and 2080. RESULTS The study included Ae. albopictus surveillance from 259 sites in China found that winter to early spring (November-February) temperatures were strongly correlated with Ae. albopictus prevalence (prediction accuracy ranges 93.0-98.8%)-the higher the temperature the higher the prevalence, while precipitation in summer (June-September) was important predictor for Ae. albopictus prevalence. The machine learning tree models predicted the current prevalence of Ae. albopictus with high levels of agreement (accuracy > 90% and Kappa agreement > 80% for all 12 months). Overall, winter temperature contributed the most to Ae. albopictus distribution, followed by summer precipitation. An increase in temperature was observed from 1970 to 2021 in most places in China, and annual change rates varied substantially from -0.22 ºC/year to 0.58 ºC/year among sites, with the largest increase in temperature occurring from February to April (an annual increase of 1.4-4.7 ºC in monthly mean, 0.6-4.0 ºC in monthly minimum, and 1.3-4.3 ºC in monthly maximum temperature) and the smallest in November and December. Temperature increases were lower in the tropics/subtropics (1.5-2.3 ºC from February-April) compared to the high-latitude areas (2.6-4.6 ºC from February-April). The projected temperatures in 2050 and 2080 by this study were approximately 1-1.5 °C higher than those projected by GCMs. The estimated current Ae. albopictus risk distribution had a northern boundary of north-central China and the southern edge of northeastern China, with a risk period of June-September. The projected future Ae. albopictus risks in 2050 and 2080 cover nearly all of China, with an expanded risk period of April-October. The current at-risk population was estimated to be 960 million and the future at-risk population was projected to be 1.2 billion. CONCLUSIONS The magnitude of climate change in China is likely to surpass GCM predictions. Future dengue risks will expand to cover nearly all of China if current climate trends continue.
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Affiliation(s)
- Hongmei Liu
- Shandong Institute of Parasitic Diseases, Shandong First Medical University and Shandong Academy of Medical Sciences, Jining, Shandong Province, 272033, People's Republic of China.
- Program in Public Health, University of California, Irvine, CA, 92697, USA.
| | - Xiaodan Huang
- Shandong Institute of Parasitic Diseases, Shandong First Medical University and Shandong Academy of Medical Sciences, Jining, Shandong Province, 272033, People's Republic of China
| | - Xiuxia Guo
- Shandong Institute of Parasitic Diseases, Shandong First Medical University and Shandong Academy of Medical Sciences, Jining, Shandong Province, 272033, People's Republic of China
| | - Peng Cheng
- Shandong Institute of Parasitic Diseases, Shandong First Medical University and Shandong Academy of Medical Sciences, Jining, Shandong Province, 272033, People's Republic of China
| | - Haifang Wang
- Shandong Institute of Parasitic Diseases, Shandong First Medical University and Shandong Academy of Medical Sciences, Jining, Shandong Province, 272033, People's Republic of China
| | - Lijuan Liu
- Shandong Institute of Parasitic Diseases, Shandong First Medical University and Shandong Academy of Medical Sciences, Jining, Shandong Province, 272033, People's Republic of China
| | - Chuanhui Zang
- Shandong Institute of Parasitic Diseases, Shandong First Medical University and Shandong Academy of Medical Sciences, Jining, Shandong Province, 272033, People's Republic of China
| | - Chongxing Zhang
- Shandong Institute of Parasitic Diseases, Shandong First Medical University and Shandong Academy of Medical Sciences, Jining, Shandong Province, 272033, People's Republic of China
| | - Xuejun Wang
- Shandong Center for Disease Control and Prevention, Jinan, 250013, China.
| | - Guofa Zhou
- Program in Public Health, University of California, Irvine, CA, 92697, USA.
| | - Maoqing Gong
- Shandong Institute of Parasitic Diseases, Shandong First Medical University and Shandong Academy of Medical Sciences, Jining, Shandong Province, 272033, People's Republic of China.
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Singh G, Soman B, Grover GS. Exploratory Spatio-Temporal Data Analysis (ESTDA) of Dengue and its association with climatic, environmental, and sociodemographic factors in Punjab, India. ECOL INFORM 2023. [DOI: 10.1016/j.ecoinf.2023.102020] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/12/2023]
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9
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Zheng Y, Emam M, Lu D, Tian M, Wang K, Peng X. Analysis of the effect of temperature on tuberculosis incidence by distributed lag non-linear model in Kashgar city, China. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2023; 30:11530-11541. [PMID: 36094714 PMCID: PMC9466343 DOI: 10.1007/s11356-022-22849-5] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/13/2022] [Accepted: 08/29/2022] [Indexed: 06/15/2023]
Abstract
The aim of this study was to explore the effect of temperature on tuberculosis (TB) incidence using the distributed lag non-linear model (DLNM) from 2017 to 2021 in Kashgar city, the region with higher TB incidence than national levels, and assist public health prevention and control measures. From January 2017 to December 2021, a total of 8730 cases of TB were reported, with the higher incidence of male than that of female. When temperature was below 1 °C, it was significantly correlated with TB incidence compared to the median observed temperature (15 °C) at lag 7, 14, and 21, and lower temperatures showed larger RR (relative risk) values. High temperature produced a protective effect on TB transmission, and higher temperature from 16 to 31 °C has lower RR. In discussion stratified by gender, the maximum RRs were achieved for both male group and female group at - 15 °C with lag 21, reporting 4.28 and 2.02, respectively. At high temperature (higher than 20 °C), the RR value of developing TB for female group was significantly larger than 1. In discussion stratified by age, the maximum RRs were achieved for all age groups (≤ 35, 36-64, ≥ 65) at - 15 °C with lag 21, reporting 3.20, 2.07, and 3.45, respectively. When the temperature was higher than 20 °C, the RR of the 36-64-year-old group and the ≥ 65-year-old group was significantly larger than 1 at lag 21, while significantly smaller than 1 for cumulative RR at lag 21, reporting 0.11, 95% confidence interval (CI) (0.01, 0.83) and 0.06, 95% CI (0.01, 0.44), respectively. In conclusion, low temperature, especially in extreme level, acts as a high-risk factor inducing TB transmission in Kashgar city. Males exhibit a significantly higher RR of developing TB at low temperature than female, as well as the elderly group in contrast to the young or middle-aged groups. High temperature has a protective effect on TB transmission in the total population, but female and middle-aged and elderly groups are also required to be alert to the delayed RR induced by it.
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Affiliation(s)
- Yanling Zheng
- College of Medical Engineering and Technology, Xinjiang Medical University, Urumqi, 830017, China.
| | - Mawlanjan Emam
- Center for Disease Control and Prevention, Kashgar, China
| | - Dongmei Lu
- Center of Respiratory and Critical Care Medicine of the People's Hospital of Xinjiang Uygur Autonomous Region, Urumqi, China
| | - Maozai Tian
- College of Medical Engineering and Technology, Xinjiang Medical University, Urumqi, 830017, China
| | - Kai Wang
- College of Medical Engineering and Technology, Xinjiang Medical University, Urumqi, 830017, China
| | - Xiaowang Peng
- Center for Disease Control and Prevention, Kashgar, China.
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Mekuriaw W, Kinde S, Kindu B, Mulualem Y, Hailu G, Gebresilassie A, Sisay C, Bekele F, Amare H, Wossen M, Woyessa A, Cross CL, Messenger LA. Epidemiological, Entomological, and Climatological Investigation of the 2019 Dengue Fever Outbreak in Gewane District, Afar Region, North-East Ethiopia. INSECTS 2022; 13:1066. [PMID: 36421969 PMCID: PMC9694398 DOI: 10.3390/insects13111066] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/14/2022] [Revised: 11/01/2022] [Accepted: 11/17/2022] [Indexed: 06/16/2023]
Abstract
Dengue Fever (DF) is an important arthropod-borne viral infection that has repeatedly occurred as outbreaks in eastern and northeastern Ethiopia since 2013. A cross-sectional epidemiological outbreak investigation was carried out from September to November 2019 on febrile patients (confirmed malaria negative) who presented with suspected and confirmed DF at both public and private health facilities in Gewane District, Afar Region, northeastern Ethiopia. Entomological investigation of containers found in randomly selected houses belonging to DF-positive patients was undertaken to survey for the presence of Aedes larvae/pupae. A total of 1185 DF cases were recorded from six health facilities during the 3-month study period. The mean age of DF cases was 27.2 years, and 42.7% of cases were female. The most affected age group was 15−49 years old (78.98%). The total case proportions differed significantly across age groups when compared to the population distribution; there were approximately 15% and 5% higher case proportions among those aged 15−49 years and 49+ years, respectively. A total of 162 artificial containers were inspected from 62 houses, with 49.4% found positive for Aedes aegypti larva/pupae. Aedes mosquitoes were most commonly observed breeding in plastic tanks, tires, and plastic or metal buckets/bowls. World Health Organization entomological indices classified the study site as high risk for dengue virus outbreaks (House Index = 45.2%, Container Index = 49.4%, and Breteau Index = 129). Time series climate data, specifically rainfall, were found to be significantly predictive of AR (p = 0.035). Study findings highlight the importance of vector control to prevent future DF outbreaks in the region. The scarcity of drinking water and microclimatic conditions may have also contributed to the occurrence of this outbreak.
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Affiliation(s)
| | - Solomon Kinde
- Ethiopian Public Health Institute, Addis Ababa 1242, Ethiopia
| | - Bezabih Kindu
- Ethiopian Public Health Institute, Addis Ababa 1242, Ethiopia
| | | | - Girma Hailu
- Ethiopian Public Health Institute, Addis Ababa 1242, Ethiopia
| | - Araya Gebresilassie
- College of Computational and Natural Science, Addis Ababa University, Addis Ababa 1000, Ethiopia
| | - Chalachw Sisay
- Ethiopian Public Health Institute, Addis Ababa 1242, Ethiopia
| | - Fitsum Bekele
- National Meteorological Agency, Addis Ababa P.O. BOX 1090, Ethiopia
| | - Hiwot Amare
- Ethiopian Public Health Institute, Addis Ababa 1242, Ethiopia
| | - Mesfin Wossen
- Ethiopian Public Health Institute, Addis Ababa 1242, Ethiopia
| | - Adugna Woyessa
- Ethiopian Public Health Institute, Addis Ababa 1242, Ethiopia
| | - Chad L. Cross
- Department of Epidemiology and Biostatistics, School of Public Health, University of Nevada, Las Vegas, NV 89154, USA
| | - Louisa A. Messenger
- Department of Disease Control, Faculty of Infectious and Tropical Diseases, London School of Hygiene and Tropical Medicine, London WC1E 7HT, UK
- Department of Environmental and Occupational Health, School of Public Health, University of Nevada, Las Vegas, NV 89154, USA
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11
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Ma J, Guo Y, Gao J, Tang H, Xu K, Liu Q, Xu L. Climate Change Drives the Transmission and Spread of Vector-Borne Diseases: An Ecological Perspective. BIOLOGY 2022; 11:1628. [PMID: 36358329 PMCID: PMC9687606 DOI: 10.3390/biology11111628] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/04/2022] [Revised: 10/31/2022] [Accepted: 11/04/2022] [Indexed: 07/30/2023]
Abstract
Climate change affects ecosystems and human health in multiple dimensions. With the acceleration of climate change, climate-sensitive vector-borne diseases (VBDs) pose an increasing threat to public health. This paper summaries 10 publications on the impacts of climate change on ecosystems and human health; then it synthesizes the other existing literature to more broadly explain how climate change drives the transmission and spread of VBDs through an ecological perspective. We highlight the multi-dimensional nature of climate change, its interaction with other factors, and the impact of the COVID-19 pandemic on transmission and spread of VBDs, specifically including: (1) the generally nonlinear relationship of local climate (temperature, precipitation and wind) and VBD transmission, with temperature especially exhibiting an n-shape relation; (2) the time-lagged effect of regional climate phenomena (the El Niño-Southern Oscillation and North Atlantic Oscillation) on VBD transmission; (3) the u-shaped effect of extreme climate (heat waves, cold waves, floods, and droughts) on VBD spread; (4) how interactions between non-climatic (land use and human mobility) and climatic factors increase VBD transmission and spread; and (5) that the impact of the COVID-19 pandemic on climate change is debatable, and its impact on VBDs remains uncertain. By exploring the influence of climate change and non-climatic factors on VBD transmission and spread, this paper provides scientific understanding and guidance for their effective prevention and control.
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Affiliation(s)
- Jian Ma
- Vanke School of Public Health, Tsinghua University, Beijing 100084, China
- Institute for Healthy China, Tsinghua University, Beijing 100084, China
| | - Yongman Guo
- Vanke School of Public Health, Tsinghua University, Beijing 100084, China
- Institute for Healthy China, Tsinghua University, Beijing 100084, China
| | - Jing Gao
- Vanke School of Public Health, Tsinghua University, Beijing 100084, China
- Respiratory Medicine Unit, Department of Medicine & Centre for Molecular Medicine, Karolinska Institutet, 171 77 Stockholm, Sweden
| | - Hanxing Tang
- Vanke School of Public Health, Tsinghua University, Beijing 100084, China
- Institute for Healthy China, Tsinghua University, Beijing 100084, China
| | - Keqiang Xu
- Clinical Pharmacy Center, Nanfang Hospital, Southern Medical University, Guangzhou 510515, China
| | - Qiyong Liu
- State Key Laboratory of Infectious Diseases Prevention and Control, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing 102206, China
| | - Lei Xu
- Vanke School of Public Health, Tsinghua University, Beijing 100084, China
- Institute for Healthy China, Tsinghua University, Beijing 100084, China
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12
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Sarma DK, Kumar M, Balabaskaran Nina P, Balasubramani K, Pramanik M, Kutum R, Shubham S, Das D, Kumawat M, Verma V, Dhurve J, George SL, Balasundreshwaran A, Prakash A, Tiwari RR. An assessment of remotely sensed environmental variables on Dengue epidemiology in Central India. PLoS Negl Trop Dis 2022; 16:e0010859. [PMID: 36251691 PMCID: PMC9612820 DOI: 10.1371/journal.pntd.0010859] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/02/2021] [Revised: 10/27/2022] [Accepted: 09/30/2022] [Indexed: 11/06/2022] Open
Abstract
In recent decades, dengue has been expanding rapidly in the tropical cities. Even though environmental factors and landscape features profoundly impact dengue vector abundance and disease epidemiology, significant gaps exist in understanding the role of local environmental heterogeneity on dengue epidemiology in India. In this study, we assessed the role of remotely sensed climatic factors (rainfall, temperature and humidity) and landscape variables (land use pattern, vegetation and built up density) on dengue incidence (2012–2019) in Bhopal city, Central India. Dengue hotspots in the city were assessed through geographical information system based spatial statistics. Dengue incidence increased from 0.59 cases in 2012 to 9.11 cases in 2019 per 10,000 inhabitants, and wards located in Southern Bhopal were found to be dengue hotspots. Distributed lag non-linear model combined with quasi Poisson regression was used to assess the exposure-response association, relative risk (RR), and delayed effects of environmental factors on dengue incidence. The analysis revealed a non-linear relationship between meteorological variables and dengue cases. The model shows that the risk of dengue cases increases with increasing mean temperature, rainfall and absolute humidity. The highest RR of dengue cases (~2.0) was observed for absolute humidity ≥60 g/m3 with a 5–15 week lag. Rapid urbanization assessed by an increase in the built-up area (a 9.1% increase in 2020 compared to 2014) could also be a key factor driving dengue incidence in Bhopal city. The study sheds important insight into the synergistic effects of both the landscape and climatic factors on the transmission dynamics of dengue. Furthermore, the study provides key baseline information on the climatic variables that can be used in the micro-level dengue prediction models in Bhopal and other cities with similar climatic conditions. Dengue, a viral disease transmitted by infected Aedes mosquitoes, is a major public health concern globally. In addition to its increased incidence in recent years, dengue is also spreading to new geographical regions. Local environmental factors are known to modify the mosquito vector density that directly impacts dengue virus transmission. Understanding the influence of environmental factors (meteorological conditions and landscape features) on dengue epidemiology in local settings is important for focused dengue intervention. Here, by utilizing dengue incidence and remotely sensed environmental data from 2012–2019, we have assessed the role of environmental factors in driving dengue virus transmission in the city of Bhopal in Central India. During the study period, a 14.5 fold increase in dengue incidence was observed in Bhopal city, which is way higher than the 2.3 fold increase reported at the national level. The risk of dengue virus transmission was higher with higher temperature and absolute humidity. An increase in built-up area, a proxy for urbanization, was found to be another predictor of increased dengue incidence in Bhopal. These findings can provide a stepping-stone for the development of dengue prediction models and the identification of dengue hotspots in order to improve vector control of this disease in cities with similar environmental conditions.
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Affiliation(s)
- Devojit Kumar Sarma
- ICMR- National Institute for Research in Environmental Health, Bhopal Bypass Road, Bhouri, Bhopal, Madhya Pradesh, India,* E-mail: (DKS); (AP)
| | - Manoj Kumar
- ICMR- National Institute for Research in Environmental Health, Bhopal Bypass Road, Bhouri, Bhopal, Madhya Pradesh, India
| | - Praveen Balabaskaran Nina
- Department of Epidemiology and Public Health, Central University of Tamil Nadu, Thiruvarur, Tamil Nadu, India,Department of Public Health and Community Medicine, Central University of Kerala, Kasaragod, Kerala, India
| | - Karuppusamy Balasubramani
- Department of Geography, School of Earth Sciences, Central University of Tamil Nadu, Thiruvarur, Tamil Nadu, India
| | - Malay Pramanik
- Urban Innovation and Sustainability Program, Department of Development and Sustainability, Asian Institute of Technology, Klong Luang, Pathumthani, Thailand
| | - Rintu Kutum
- Department of Computer Science, Ashoka University, Sonipat, Haryana, India,Trivedi School of Biosciences, Ashoka University
| | - Swasti Shubham
- ICMR- National Institute for Research in Environmental Health, Bhopal Bypass Road, Bhouri, Bhopal, Madhya Pradesh, India
| | - Deepanker Das
- ICMR- National Institute for Research in Environmental Health, Bhopal Bypass Road, Bhouri, Bhopal, Madhya Pradesh, India
| | - Manoj Kumawat
- ICMR- National Institute for Research in Environmental Health, Bhopal Bypass Road, Bhouri, Bhopal, Madhya Pradesh, India
| | - Vinod Verma
- Stem Cell Research Centre, Department of Hematology, Sanjay Gandhi Post-Graduate Institute of Medical Sciences, Lucknow, Uttar Pradesh, India
| | - Jigyasa Dhurve
- ICMR- National Institute for Research in Environmental Health, Bhopal Bypass Road, Bhouri, Bhopal, Madhya Pradesh, India
| | - Sekar Leo George
- Department of Geography, School of Earth Sciences, Central University of Tamil Nadu, Thiruvarur, Tamil Nadu, India
| | - Alangar Balasundreshwaran
- Department of Geography, School of Earth Sciences, Central University of Tamil Nadu, Thiruvarur, Tamil Nadu, India
| | - Anil Prakash
- ICMR- National Institute for Research in Environmental Health, Bhopal Bypass Road, Bhouri, Bhopal, Madhya Pradesh, India,* E-mail: (DKS); (AP)
| | - Rajnarayan R. Tiwari
- ICMR- National Institute for Research in Environmental Health, Bhopal Bypass Road, Bhouri, Bhopal, Madhya Pradesh, India
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13
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Ali A, Nisar S, Khan MA, Mohsan SAH, Noor F, Mostafa H, Marey M. A Privacy-Preserved Internet-of-Medical-Things Scheme for Eradication and Control of Dengue Using UAV. MICROMACHINES 2022; 13:1702. [PMID: 36296055 PMCID: PMC9609698 DOI: 10.3390/mi13101702] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/09/2022] [Revised: 09/30/2022] [Accepted: 10/06/2022] [Indexed: 06/16/2023]
Abstract
Dengue is a mosquito-borne viral infection, found in tropical and sub-tropical climates worldwide, mostly in urban and semi-urban areas. Countries like Pakistan receive heavy rains annually resulting in floods in urban cities due to poor drainage systems. Currently, different cities of Pakistan are at high risk of dengue outbreaks, as multiple dengue cases have been reported due to poor flood control and drainage systems. After heavy rain in urban areas, mosquitoes are provided with a favorable environment for their breeding and transmission through stagnant water due to poor maintenance of the drainage system. The history of the dengue virus in Pakistan shows that there is a closed relationship between dengue outbreaks and a rainfall. There is no specific treatment for dengue; however, the outbreak can be controlled through internet of medical things (IoMT). In this paper, we propose a novel privacy-preserved IoMT model to control dengue virus outbreaks by tracking dengue virus-infected patients based on bedding location extracted using call data record analysis (CDRA). Once the bedding location of the patient is identified, then the actual infected spot can be easily located by using geographic information system mapping. Once the targeted spots are identified, then it is very easy to eliminate the dengue by spraying the affected areas with the help of unmanned aerial vehicles (UAVs). The proposed model identifies the targeted spots up to 100%, based on the bedding location of the patient using CDRA.
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Affiliation(s)
- Amir Ali
- Military College of Signals (MCS), National University of Sciences and Technology, Islamabad 44000, Pakistan
| | - Shibli Nisar
- Military College of Signals (MCS), National University of Sciences and Technology, Islamabad 44000, Pakistan
| | - Muhammad Asghar Khan
- Department of Electrical Engineering, Hamdard University, Islamabad 44000, Pakistan
- Smart Systems Engineering Laboratory, College of Engineering, Prince Sultan University, Riyadh 11586, Saudi Arabia
| | | | - Fazal Noor
- Faculty of Computer and Information Systems, Islamic University of Madinah, Madinah 400411, Saudi Arabia
| | - Hala Mostafa
- Department of Information Technology, College of Computer and Information Sciences, Princess Nourah bint Abdulrahman University, P.O. Box 84428, Riyadh 11671, Saudi Arabia
| | - Mohamed Marey
- Smart Systems Engineering Laboratory, College of Engineering, Prince Sultan University, Riyadh 11586, Saudi Arabia
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14
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Li C, Zhao Z, Yan Y, Liu Q, Zhao Q, Ma W. Short-term effects of tropical cyclones on the incidence of dengue: a time-series study in Guangzhou, China. Parasit Vectors 2022; 15:358. [PMID: 36203178 PMCID: PMC9535872 DOI: 10.1186/s13071-022-05486-2] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/22/2022] [Accepted: 09/16/2022] [Indexed: 11/12/2022] Open
Abstract
Background Limited evidence is available about the association between tropical cyclones and dengue incidence. This study aimed to examine the effects of tropical cyclones on the incidence of dengue and to explore the vulnerable populations in Guangzhou, China. Methods Weekly dengue case data, tropical cyclone and meteorological data during the tropical cyclones season (June to October) from 2015 to 2019 were collected for the study. A quasi-Poisson generalized linear model combined with a distributed lag non-linear model was conducted to quantify the association between tropical cyclones and dengue, controlling for meteorological factors, seasonality, and long-term trend. Proportion of dengue cases attributable to tropical cyclone exposure was calculated. The effect difference by sex and age groups was calculated to identify vulnerable populations. The tropical cyclones were classified into two levels to compare the effects of different grades of tropical cyclones on the dengue incidence. Results Tropical cyclones were associated with an increased number of dengue cases with the maximum risk ratio of 1.41 (95% confidence interval 1.17–1.69) in lag 0 week and cumulative risk ratio of 2.13 (95% confidence interval 1.28–3.56) in lag 0–4 weeks. The attributable fraction was 6.31% (95% empirical confidence interval 1.96–10.16%). Men and the elderly were more vulnerable to the effects of tropical cyclones than the others. The effects of typhoons were stronger than those of tropical storms among various subpopulations. Conclusions Our findings indicate that tropical cyclones may increase the incidence of dengue within a 4-week lag in Guangzhou, China, and the effects were more pronounced in men and the elderly. Precautionary measures should be taken with a focus on the identified vulnerable populations to control the transmission of dengue associated with tropical cyclones. Graphical Abstract ![]()
Supplementary Information The online version contains supplementary material available at 10.1186/s13071-022-05486-2.
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Affiliation(s)
- Chuanxi Li
- Department of Epidemiology, School of Public Health, Cheeloo College of Medicine, Shandong University, Jinan, China.,Shandong University Climate Change and Health Center, Jinan, China
| | - Zhe Zhao
- Department of Epidemiology, School of Public Health, Cheeloo College of Medicine, Shandong University, Jinan, China.,Shandong University Climate Change and Health Center, Jinan, China
| | - Yu Yan
- Department of Epidemiology, School of Public Health, Cheeloo College of Medicine, Shandong University, Jinan, China.,Shandong University Climate Change and Health Center, Jinan, China
| | - Qiyong Liu
- Shandong University Climate Change and Health Center, Jinan, China.,State Key Laboratory of Infectious Disease Prevention and Control, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, China
| | - Qi Zhao
- Department of Epidemiology, School of Public Health, Cheeloo College of Medicine, Shandong University, Jinan, China. .,Shandong University Climate Change and Health Center, Jinan, China. .,Department of Epidemiology, IUF-Leibniz Research Institute for Environmental Medicine, Düsseldorf, Germany.
| | - Wei Ma
- Department of Epidemiology, School of Public Health, Cheeloo College of Medicine, Shandong University, Jinan, China. .,Shandong University Climate Change and Health Center, Jinan, China.
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15
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Bhatia S, Bansal D, Patil S, Pandya S, Ilyas QM, Imran S. A Retrospective Study of Climate Change Affecting Dengue: Evidences, Challenges and Future Directions. Front Public Health 2022; 10:884645. [PMID: 35712272 PMCID: PMC9197220 DOI: 10.3389/fpubh.2022.884645] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/26/2022] [Accepted: 04/26/2022] [Indexed: 11/30/2022] Open
Abstract
Climate change is unexpected weather patterns that can create an alarming situation. Due to climate change, various sectors are affected, and one of the sectors is healthcare. As a result of climate change, the geographic range of several vector-borne human infectious diseases will expand. Currently, dengue is taking its toll, and climate change is one of the key reasons contributing to the intensification of dengue disease transmission. The most important climatic factors linked to dengue transmission are temperature, rainfall, and relative humidity. The present study carries out a systematic literature review on the surveillance system to predict dengue outbreaks based on Machine Learning modeling techniques. The systematic literature review discusses the methodology and objectives, the number of studies carried out in different regions and periods, the association between climatic factors and the increase in positive dengue cases. This study also includes a detailed investigation of meteorological data, the dengue positive patient data, and the pre-processing techniques used for data cleaning. Furthermore, correlation techniques in several studies to determine the relationship between dengue incidence and meteorological parameters and machine learning models for predictive analysis are discussed. In the future direction for creating a dengue surveillance system, several research challenges and limitations of current work are discussed.
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Affiliation(s)
- Surbhi Bhatia
- Department of Information Systems, College of Computer Sciences and Information Technology, King Faisal University, Al-Ahsa, Saudi Arabia
| | - Dhruvisha Bansal
- Symbiosis Institute of Technology, Symbiosis International (Deemed) University, Pune, India
| | - Seema Patil
- Symbiosis Institute of Technology, Symbiosis International (Deemed) University, Pune, India
| | - Sharnil Pandya
- Symbiosis Institute of Technology, Symbiosis International (Deemed) University, Pune, India
| | - Qazi Mudassar Ilyas
- Department of Information Systems, College of Computer Sciences and Information Technology, King Faisal University, Al-Ahsa, Saudi Arabia
| | - Sajida Imran
- Department of Computer Engineering, College of Computer Sciences and Information Technology, King Faisal University, Al-Ahsa, Saudi Arabia
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16
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Prediction of dengue fever outbreaks using climate variability and Markov chain Monte Carlo techniques in a stochastic susceptible-infected-removed model. Sci Rep 2022; 12:5459. [PMID: 35361845 PMCID: PMC8969405 DOI: 10.1038/s41598-022-09489-y] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/22/2021] [Accepted: 03/24/2022] [Indexed: 12/16/2022] Open
Abstract
The recent increase in the global incidence of dengue fever resulted in over 2.7 million cases in Latin America and many cases in Southeast Asia and has warranted the development and application of early warning systems (EWS) for futuristic outbreak prediction. EWS pertaining to dengue outbreaks is imperative; given the fact that dengue is linked to environmental factors owing to its dominance in the tropics. Prediction is an integral part of EWS, which is dependent on several factors, in particular, climate, geography, and environmental factors. In this study, we explore the role of increased susceptibility to a DENV serotype and climate variability in developing novel predictive models by analyzing RT-PCR and DENV-IgM confirmed cases in Singapore and Honduras, which reported high dengue incidence in 2019 and 2020, respectively. A random-sampling-based susceptible-infected-removed (SIR) model was used to obtain estimates of the susceptible fraction for modeling the dengue epidemic, in addition to the Bayesian Markov Chain Monte Carlo (MCMC) technique that was used to fit the model to Singapore and Honduras case report data from 2012 to 2020. Regression techniques were used to implement climate variability in two methods: a climate-based model, based on individual climate variables, and a seasonal model, based on trigonometrically varying transmission rates. The seasonal model accounted for 98.5% and 92.8% of the variance in case count in the 2020 Singapore and 2019 Honduras outbreaks, respectively. The climate model accounted for 75.3% and 68.3% of the variance in Singapore and Honduras outbreaks respectively, besides accounting for 75.4% of the variance in the major 2013 Singapore outbreak, 71.5% of the variance in the 2019 Singapore outbreak, and over 70% of the variance in 2015 and 2016 Honduras outbreaks. The seasonal model accounted for 14.2% and 83.1% of the variance in the 2013 and 2019 Singapore outbreaks, respectively, in addition to 91% and 59.5% of the variance in the 2015 and 2016 Honduras outbreaks, respectively. Autocorrelation lag tests showed that the climate model exhibited better prediction dynamics for Singapore outbreaks during the dry season from May to August and in the rainy season from June to October in Honduras. After incorporation of susceptible fractions, the seasonal model exhibited higher accuracy in predicting outbreaks of higher case magnitude, including those of the 2019–2020 dengue epidemic, in comparison to the climate model, which was more accurate in outbreaks of smaller magnitude. Such modeling studies could be further performed in various outbreaks, such as the ongoing COVID-19 pandemic to understand the outbreak dynamics and predict the occurrence of future outbreaks.
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17
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Analysis of bluetongue disease epizootics in sheep of Andhra Pradesh, India using spatial and temporal autocorrelation. Vet Res Commun 2022; 46:967-978. [PMID: 35194693 DOI: 10.1007/s11259-022-09902-x] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/12/2021] [Accepted: 02/10/2022] [Indexed: 10/19/2022]
Abstract
Bluetongue (BT) disease poses a constant risk to the livestock population around the world. A better understanding of the risk factors will enable a more accurate prediction of the place and time of high-risk events. Mapping the disease epizootics over a period in a particular geographic area will identify the spatial distribution of disease occurrence. A Geographical Information System (GIS) based methodology to analyze the relationship between bluetongue epizootics and spatial-temporal patterns was used for the years 2000 to 2015 in sheep of Andhra Pradesh, India. Autocorrelation (ACF), partial autocorrelation (PACF), and cross-correlation (CCF) analyses were carried out to find the self-dependency between BT epizootics and their dependencies on environmental factors and livestock population. The association with climatic or remote sensing variables at different months lag, including wind speed, temperature, rainfall, relative humidity, normalized difference vegetation index (NDVI), normalized difference water index (NDWI), land surface temperature (LST), was also examined. The ACF & PACF of BT epizootics with its lag showed a significant positive autocorrelation with a month's lag (r = 0.41). Cross-correlations between the environmental variables and BT epizootics indicated the significant positive correlations at 0, 1, and 2 month's lag of rainfall, relative humidity, normalized difference water index (NDWI), and normalized difference vegetation index (NDVI). Spatial autocorrelation analysis estimated the univariate global Moran's I value of 0.21. Meanwhile, the local Moran's I value for the year 2000 (r = 0.32) showed a high degree of spatial autocorrelation. The spatial autocorrelation analysis revealed that the BT epizootics in sheep are having considerable spatial association among the outbreaks in nearby districts, and have to be taken care of while making any forecasting or disease prediction with other risk factors.
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18
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Dhiman R, Singh P, Kumar P. Kyasanur forest disease and climatic attributes in India. J Vector Borne Dis 2022; 59:79-85. [DOI: 10.4103/0972-9062.331408] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022] Open
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19
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Meng H, Xiao J, Liu T, Zhu Z, Gong D, Kang M, Song T, Peng Z, Deng A, Ma W. The impacts of precipitation patterns on dengue epidemics in Guangzhou city. INTERNATIONAL JOURNAL OF BIOMETEOROLOGY 2021; 65:1929-1937. [PMID: 34114103 DOI: 10.1007/s00484-021-02149-2] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/14/2020] [Revised: 04/03/2021] [Accepted: 05/16/2021] [Indexed: 06/12/2023]
Abstract
Some studies have demonstrated that precipitation is an important risk factor of dengue epidemics. However, current studies mostly focused on a single precipitation variable, and few studies focused on the impact of precipitation patterns on dengue epidemics. This study aims to explore optimal precipitation patterns for dengue epidemics. Weekly dengue case counts and meteorological data from 2006 to 2018 in Guangzhou of China were collected. A generalized additive model with Poisson distribution was used to investigate the association between precipitation patterns and dengue. Precipitation patterns were defined as the combinations of three weekly precipitation variables: accumulative precipitation (Pre_A), the number of days with light or moderate precipitation (Pre_LMD), and the coefficient of precipitation variation (Pre_CV). We explored to identify optimal precipitation patterns for dengue epidemics. With a lead time of 10 weeks, minimum temperature, relative humidity, Pre_A, and Pre_LMD were positively associated with dengue, while Pre_CV was negatively associated with dengue. A precipitation pattern with Pre_A of 20.67-55.50 mm per week, Pre_LMD of 3-4 days per week, and Pre_CV less than 1.41 per week might be an optimal precipitation pattern for dengue epidemics in Guangzhou. The finding may be used for climate-smart early warning and decision-making of dengue prevention and control.
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Affiliation(s)
- Haorong Meng
- Guangdong Provincial Institute of Public Health, Guangdong Provincial Center for Disease Control and Prevention, Guangzhou, China
- School of Public Health, Southern Medical University, Guangzhou, China
| | - Jianpeng Xiao
- Guangdong Provincial Institute of Public Health, Guangdong Provincial Center for Disease Control and Prevention, Guangzhou, China
- School of Public Health, Southern Medical University, Guangzhou, China
| | - Tao Liu
- Guangdong Provincial Institute of Public Health, Guangdong Provincial Center for Disease Control and Prevention, Guangzhou, China
| | - Zhihua Zhu
- Guangdong Provincial Institute of Public Health, Guangdong Provincial Center for Disease Control and Prevention, Guangzhou, China
| | - Dexin Gong
- Guangdong Provincial Institute of Public Health, Guangdong Provincial Center for Disease Control and Prevention, Guangzhou, China
| | - Min Kang
- Guangdong Provincial Center for Disease Control and Prevention, Guangzhou, China
| | - Tie Song
- Guangdong Provincial Center for Disease Control and Prevention, Guangzhou, China
| | - Zhiqiang Peng
- Guangdong Provincial Center for Disease Control and Prevention, Guangzhou, China
| | - Aiping Deng
- Guangdong Provincial Center for Disease Control and Prevention, Guangzhou, China
| | - Wenjun Ma
- Guangdong Provincial Institute of Public Health, Guangdong Provincial Center for Disease Control and Prevention, Guangzhou, China.
- School of Public Health, Southern Medical University, Guangzhou, China.
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Carrasco-Escobar G, Qquellon J, Villa D, Cava R, Llanos-Cuentas A, Benmarhnia T. Time-Varying Effects of Meteorological Variables on Malaria Epidemiology in the Context of Interrupted Control Efforts in the Amazon Rainforest, 2000-2017. Front Med (Lausanne) 2021; 8:721515. [PMID: 34660633 PMCID: PMC8511324 DOI: 10.3389/fmed.2021.721515] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/07/2021] [Accepted: 08/27/2021] [Indexed: 11/25/2022] Open
Abstract
Successful malaria control interventions, mostly based on the training of health workers, distribution of insecticide-treated nets, and spraying, decrease malaria incidence; however, when these interventions are interrupted, a resurgence may occur. In the Peruvian Amazon, after discontinuing the control activities implemented by the PAMAFRO project (2006–2010)-a Global Fund-sponsored project for the strengthening of malaria control and surveillance in multiple countries in Latin America– malaria cases re-emerged dramatically. In parallel, meteorological factors determine the conditions suitable for the development, reproduction, and survival of mosquito vectors and parasites. This study hypothesized that interruption of malaria interventions may have modified the meteorological-malaria relationships over time (i.e., temporal changes in the dose-response between meteorological variables and malaria incidence). In this panel data analysis, we assessed the extent that relationships between meteorological variables and malaria changed temporally using data of monthly malaria incidence due to Plasmodium vivax or P. falciparum in Loreto, Peru (2000–2017). Generalized additive models were used to explore how the effects of meteorological variables changed in magnitude before, during, and after the PAMAFRO intervention. We found that once the PAMAFRO intervention had been interrupted, the estimated effects (dose-response) of meteorological variables on incidence rates decreased for both malaria parasite species. However, these fitted effect estimates did not reach their baseline levels (before the PAMAFRO period); variations of time-varying slopes between 0.45 and 2.07 times were observed after the PAMAFRO intervention. We also reported significant heterogeneity in the geographical distributions of malaria, parasite species, and meteorological variables. High malaria transmission occurred consistently in the northwestern provinces of Loreto Department. Since the end of the PAMAFRO period, a higher effect of precipitation and actual evapotranspiration was described on P. falciparum compared to P. vivax. The effect of temperature on malaria was greater over a shorter time (1-month lag or less), compared with precipitation and actual evapotranspiration (12-month lag). These findings demonstrate the importance of sustained malaria control efforts since interruption may enhance the links between meteorological factors and malaria. Our results also emphasize the importance of considering the time-varying effect of meteorological factors on malaria incidence to tailor control interventions, especially to better manage the current and future climate change crisis.
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Affiliation(s)
- Gabriel Carrasco-Escobar
- Health Innovation Laboratory, Institute of Tropical Medicine "Alexander von Humboldt", Universidad Peruana Cayetano Heredia, Lima, Peru.,Herbert Wertheim School of Public Health and Human Longevity Science, University of California, San Diego, La Jolla, CA, United States
| | - Jazmin Qquellon
- Health Innovation Laboratory, Institute of Tropical Medicine "Alexander von Humboldt", Universidad Peruana Cayetano Heredia, Lima, Peru
| | - Diego Villa
- Health Innovation Laboratory, Institute of Tropical Medicine "Alexander von Humboldt", Universidad Peruana Cayetano Heredia, Lima, Peru
| | - Renato Cava
- Health Innovation Laboratory, Institute of Tropical Medicine "Alexander von Humboldt", Universidad Peruana Cayetano Heredia, Lima, Peru
| | - Alejandro Llanos-Cuentas
- Facultad de Salud Pública y Administración, Universidad Peruana Cayetano Heredia, Lima, Peru.,Instituto de Medicina Tropical "Alexander von Humboldt", Universidad Peruana Cayetano Heredia, Lima, Peru
| | - Tarik Benmarhnia
- Herbert Wertheim School of Public Health and Human Longevity Science, University of California, San Diego, La Jolla, CA, United States.,Scripps Institution of Oceanography, University of California, San Diego, San Diego, CA, United States
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Coalson JE, Anderson EJ, Santos EM, Madera Garcia V, Romine JK, Luzingu JK, Dominguez B, Richard DM, Little AC, Hayden MH, Ernst KC. The Complex Epidemiological Relationship between Flooding Events and Human Outbreaks of Mosquito-Borne Diseases: A Scoping Review. ENVIRONMENTAL HEALTH PERSPECTIVES 2021; 129:96002. [PMID: 34582261 PMCID: PMC8478154 DOI: 10.1289/ehp8887] [Citation(s) in RCA: 15] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/28/2020] [Revised: 08/10/2021] [Accepted: 08/19/2021] [Indexed: 06/13/2023]
Abstract
BACKGROUND Climate change is expected to increase the frequency of flooding events. Although rainfall is highly correlated with mosquito-borne diseases (MBD) in humans, less research focuses on understanding the impact of flooding events on disease incidence. This lack of research presents a significant gap in climate change-driven disease forecasting. OBJECTIVES We conducted a scoping review to assess the strength of evidence regarding the potential relationship between flooding and MBD and to determine knowledge gaps. METHODS PubMed, Embase, and Web of Science were searched through 31 December 2020 and supplemented with review of citations in relevant publications. Studies on rainfall were included only if the operationalization allowed for distinction of unusually heavy rainfall events. Data were abstracted by disease (dengue, malaria, or other) and stratified by post-event timing of disease assessment. Studies that conducted statistical testing were summarized in detail. RESULTS From 3,008 initial results, we included 131 relevant studies (dengue n = 45 , malaria n = 61 , other MBD n = 49 ). Dengue studies indicated short-term (< 1 month ) decreases and subsequent (1-4 month) increases in incidence. Malaria studies indicated post-event incidence increases, but the results were mixed, and the temporal pattern was less clear. Statistical evidence was limited for other MBD, though findings suggest that human outbreaks of Murray Valley encephalitis, Ross River virus, Barmah Forest virus, Rift Valley fever, and Japanese encephalitis may follow flooding. DISCUSSION Flooding is generally associated with increased incidence of MBD, potentially following a brief decrease in incidence for some diseases. Methodological inconsistencies significantly limit direct comparison and generalizability of study results. Regions with established MBD and weather surveillance should be leveraged to conduct multisite research to a) standardize the quantification of relevant flooding, b) study nonlinear relationships between rainfall and disease, c) report outcomes at multiple lag periods, and d) investigate interacting factors that modify the likelihood and severity of outbreaks across different settings. https://doi.org/10.1289/EHP8887.
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Affiliation(s)
- Jenna E. Coalson
- Center for Insect Science, University of Arizona, Tucson, Arizona, USA
| | | | - Ellen M. Santos
- Department of Epidemiology and Biostatistics, University of Arizona Mel and Enid Zuckerman College of Public Health, Tucson, Arizona, USA
| | - Valerie Madera Garcia
- Department of Epidemiology and Biostatistics, University of Arizona Mel and Enid Zuckerman College of Public Health, Tucson, Arizona, USA
| | - James K. Romine
- Department of Epidemiology and Biostatistics, University of Arizona Mel and Enid Zuckerman College of Public Health, Tucson, Arizona, USA
| | - Joy K. Luzingu
- Department of Epidemiology and Biostatistics, University of Arizona Mel and Enid Zuckerman College of Public Health, Tucson, Arizona, USA
| | - Brian Dominguez
- Department of Epidemiology and Biostatistics, University of Arizona Mel and Enid Zuckerman College of Public Health, Tucson, Arizona, USA
| | - Danielle M. Richard
- Department of Epidemiology and Biostatistics, University of Arizona Mel and Enid Zuckerman College of Public Health, Tucson, Arizona, USA
| | - Ashley C. Little
- Department of Epidemiology and Biostatistics, University of Arizona Mel and Enid Zuckerman College of Public Health, Tucson, Arizona, USA
| | - Mary H. Hayden
- National Institute for Human Resilience, University of Colorado Colorado Springs, Colorado Springs, Colorado, USA
| | - Kacey C. Ernst
- Department of Epidemiology and Biostatistics, University of Arizona Mel and Enid Zuckerman College of Public Health, Tucson, Arizona, USA
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Prevalence and trend of emerging and re-emerging arboviral infections in the state of Odisha. Virusdisease 2021; 32:504-510. [PMID: 34337107 PMCID: PMC8312379 DOI: 10.1007/s13337-021-00730-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/23/2020] [Accepted: 07/14/2021] [Indexed: 11/23/2022] Open
Abstract
Newly emerging or re-emerging infections are posing continuous threat to both public health system and clinical care globally. The emergence of infections especially caused by arboviruses can be linked to several mechanisms which include geographical expansion linked to human development and transportation, global warming, enhanced transmission in peridomestic area and close proximity of human habitations to domestic as well as wild animals. The co-circulation of Dengue, Chikungunya and Zika is a matter of public health priority due to the fact that they are transmitted by the same vector as well as increase in the number of reported cases of severe dengue, post-chikungunya chronic joint disease and microcephaly related to Zika virus disease. The study was designed to estimate the prevalence of these arboviral infections in Odisha. About 5198 cases presenting with common clinical symptoms of fever, arthralgia, headache, myalgia and malaise were screened during 2016–2019. A total of 42.2% patients tested positive for dengue NS1 antigen (n = 4154), 30.2% for dengue IgM (n = 2161) and 14.3% for chikungunya IgM (n = 1816). A total of 1684 samples were subjected to Zika RT-PCR and none was tested positive. Peak in the numbers of dengue/ chikungunya cases was evident in the post-monsoon months of July – October. Circulation of all four serotypes of dengue i.e. DEN 1, 2, 3, and 4 was noticed in the state. Molecular investigation of suspected Chik cases in early phases showed circulation of Eastern Central Southern African genotype (E1:226A). There is dearth of knowledge about disease severity during arbovirus co-infections and importance of adequate management of patients at an early stage residing in risk areas. It is the first study in Odisha to study the pattern and status of these three arboviral diseases Dengue, Chikungunya and Zika. The outcome of this study will help in focusing and improvement of existing surveillance systems and vector control tools, as well as on the development of suitable antiviral agents and formulating candidate vaccine.
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Seah A, Aik J, Ng LC, Tam CC. The effects of maximum ambient temperature and heatwaves on dengue infections in the tropical city-state of Singapore - A time series analysis. THE SCIENCE OF THE TOTAL ENVIRONMENT 2021; 775:145117. [PMID: 33618312 DOI: 10.1016/j.scitotenv.2021.145117] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/08/2020] [Revised: 12/31/2020] [Accepted: 01/08/2021] [Indexed: 06/12/2023]
Abstract
BACKGROUND Global incidence of dengue has surged rapidly over the past decade. Each year, an estimated 390 million infections occur worldwide, with Asia-Pacific countries bearing about three-quarters of the global dengue disease burden. Global warming may influence the pattern of dengue transmission. While previous studies have shown that extremely high temperatures can impede the development of the Aedes mosquito, the effect of such extreme heat over a sustained period, also known as heatwaves, has not been investigated in a tropical climate setting. AIM We examined the short-term relationships between maximum ambient temperature and heatwaves and reported dengue infections in Singapore, via ecological time series analysis, using data from 2009 to 2018. METHODS We studied the effect of two measures of extreme heat - (i) heatwaves and (ii) maximum ambient temperature. We used a negative binomial regression, coupled with a distributed lag nonlinear model, to examine the immediate and lagged associations of extreme temperature on dengue infections, on a weekly timescale. We adjusted for long-term trend, seasonality, rainfall and absolute humidity, public holidays and autocorrelation. RESULTS We observed an overall inhibitive effect of heatwaves on the risk of dengue infections, and a parabolic relationship between maximum temperature and dengue infections. A 1 °C increase in maximum temperature from 31 °C was associated with a 13.1% (Relative Risk (RR): 0.868, 95% CI: 0.798, 0.946) reduction in the cumulative risk of dengue infections over six weeks. Weeks with 3 heatwave days were associated with a 28.3% (RR: 0.717, 95% CI: 0.608, 0.845) overall reduction compared to weeks with no heatwave days. Adopting different heatwaves specifications did not substantially alter our estimates. CONCLUSION Extreme heat was associated with decreased dengue incidence. Findings from this study highlight the importance of understanding the temperature dependency of vector-borne diseases in resource planning for an anticipated climate change scenario.
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Affiliation(s)
- Annabel Seah
- Environmental Health Institute, National Environment Agency, 40 Scotts Road, Environment Building, #13-00, Singapore 228231, Singapore.
| | - Joel Aik
- Environmental Health Institute, National Environment Agency, 40 Scotts Road, Environment Building, #13-00, Singapore 228231, Singapore; Pre-hospital & Emergency Research Centre, Duke-NUS Medical School, 8 College Road, Singapore 169857, Singapore.
| | - Lee-Ching Ng
- Environmental Health Institute, National Environment Agency, 40 Scotts Road, Environment Building, #13-00, Singapore 228231, Singapore.
| | - Clarence C Tam
- Saw Swee Hock School of Public Health, National University of Singapore and National University Health System, 12 Science Drive 2, #10-01, Singapore 117549, Singapore.
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Faridah L, Mindra IGN, Putra RE, Fauziah N, Agustian D, Natalia YA, Watanabe K. Spatial and temporal analysis of hospitalized dengue patients in Bandung: demographics and risk. Trop Med Health 2021; 49:44. [PMID: 34039439 PMCID: PMC8152360 DOI: 10.1186/s41182-021-00329-9] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/10/2021] [Accepted: 05/03/2021] [Indexed: 01/02/2023] Open
Abstract
Background Bandung, the fourth largest city in Indonesia and capital of West Java province, has been considered a major endemic area of dengue, and studies show that the incidence in this city could increase and spread rapidly. At the same time, estimation of incidence could be inaccurate due to a lack of reliable surveillance systems. To provide strategic information for the dengue control program in the face of limited capacity, this study used spatial pattern analysis of a possible outbreak of dengue cases, through the Geographic Information System (GIS). To further enhance the information needed for effective policymaking, we also analyzed the demographic pattern of dengue cases. Methods Monthly reports of dengue cases from January 2014 to December 2016 from 16 hospitals in Bandung were collected as the database, which consisted of address, sex, age, and code to anonymize the patients. The address was then transformed into geocoding and used to estimate the relative risk of a particular area’s developing a cluster of dengue cases. We used the kernel density estimation method to analyze the dynamics of change of dengue cases. Results The model showed that the spatial cluster of the relative risk of dengue incidence was relatively unchanged for 3 years. Dengue high-risk areas predominated in the southern and southeastern parts of Bandung, while low-risk areas were found mostly in its western and northeastern regions. The kernel density estimation showed strong cluster groups of dengue cases in the city. Conclusions This study demonstrated a strong pattern of reported cases related to specific demographic groups (males and children). Furthermore, spatial analysis using GIS also visualized the dynamic development of the aggregation of disease incidence (hotspots) for dengue cases in Bandung. These data may provide strategic information for the planning and design of dengue control programs.
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Affiliation(s)
- Lia Faridah
- Parasitology Division, Department of Biomedical Science, Faculty of Medicine, Universitas Padjadjaran, Bandung, Indonesia. .,Foreign Visiting Researcher at Department of Civil and Environmental Engineering, Ehime University, Matsuyama, Japan.
| | | | - Ramadhani Eka Putra
- School of Life Science and Technology, Institut Teknologi Bandung, Jl. Ganeca 10, Bandung, West Java, 40132, Indonesia
| | - Nisa Fauziah
- Parasitology Division, Department of Biomedical Science, Faculty of Medicine, Universitas Padjadjaran, Bandung, Indonesia
| | - Dwi Agustian
- Department of Public Health, Faculty of Medicine, Universitas Padjadjaran, Bandung, Indonesia
| | - Yessika Adelwin Natalia
- Department of Public Health, Faculty of Medicine, Universitas Padjadjaran, Bandung, Indonesia
| | - Kozo Watanabe
- Department of Civil and Environmental Engineering, Ehime University, Matsuyama, Japan
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Climate-based dengue model in Semarang, Indonesia: Predictions and descriptive analysis. Infect Dis Model 2021; 6:598-611. [PMID: 33869907 PMCID: PMC8040269 DOI: 10.1016/j.idm.2021.03.005] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/30/2020] [Revised: 02/09/2021] [Accepted: 03/13/2021] [Indexed: 01/13/2023] Open
Abstract
Background Dengue is one of the most rapidly spreading vector-borne diseases, which is considered to be a major health concern in tropical and sub-tropical countries. It is strongly believed that the spread and abundance of vectors are related to climate. Construction of climate-based mathematical model that integrates meteorological factors into disease infection model becomes compelling challenge since the climate is positively associated with both incidence and vector existence. Methods A host-vector model is constructed to simulate the dynamic of transmission. The infection rate parameter is replaced with the time-dependent coefficient obtained by optimization to approximate the daily dengue data. Further, the optimized infection rate is denoted as a function of climate variables using the Autoregressive Distributed Lag (ARDL) model. Results The infection parameter can be extended when updated daily climates are known, and it can be useful to forecast dengue incidence. This approach provides proper prediction, even when tested in increasing or decreasing prediction windows. In addition, associations between climate and dengue are presented as a reversed slide-shaped curve for dengue-humidity and a reversed U-shaped curves for dengue-temperature and dengue-precipitation. The range of optimal temperature for infection is 24.3–30.5 °C. Humidity and precipitation are positively associated with dengue upper the threshold 70% at lag 38 days and below 50 mm at lag 50 days, respectively. Conclusion Identification of association between climate and dengue is potentially useful to counter the high risk of dengue and strengthen the public health system and reduce the increase of the dengue burden.
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Karthikeyan R, Rupner RN, Koti SR, Jaganathasamy N, Malik YS, Sinha DK, Singh BR, Vinodh Kumar OR. Spatio-temporal and time series analysis of bluetongue outbreaks with environmental factors extracted from Google Earth Engine (GEE) in Andhra Pradesh, India. Transbound Emerg Dis 2021; 68:3631-3642. [PMID: 33393214 DOI: 10.1111/tbed.13972] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2020] [Revised: 12/24/2020] [Accepted: 12/30/2020] [Indexed: 01/02/2023]
Abstract
This study describes the spatial and temporal patterns of bluetongue (BT) outbreaks with environmental factors in undivided Andhra Pradesh, India. Descriptive analysis of the reported BT outbreaks (n = 2,697) in the study period (2000-2017) revealed a higher frequency of outbreaks during monsoon and post-monsoon months. Correlation analysis of Normalized Difference Vegetation Index (NDVI), Normalized Difference Water Index (NDWI), rainfall and relative humidity (RH) displayed a significant positive correlation with BT outbreaks (p < .05). Retrospective unadjusted space-time, adjusted temporal and spatial analysis detected two, five and two statistically significant (p < .05) clusters, respectively. Time series distribution lag analysis examined the temporal patterns of BT outbreaks with environmental, biophysical factors and estimated that a decrease in 1 unit of rainfall (mm) was associated with 0.2% increase in the outbreak at lag 12 months. Similarly, a 1°C increase in land surface temperature (LST) was associated with 6.54% increase in the outbreaks at lag 12 months. However, an increase in 1 unit of wind speed (m/s) was associated with a 16% decrease in the outbreak at lag 10 months. The predictive model indicated that the peak of BT outbreaks were from October to December, the post-monsoon season in Andhra Pradesh region. The findings suggest that environmental factors influence BT outbreaks, and due to changes in climatic conditions, we may notice higher numbers of BT outbreaks in the coming years. The knowledge of spatial and temporal clustering of BT outbreaks may assist in adopting proper measures to prevent and control the BT spread.
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Affiliation(s)
| | - Ramkumar N Rupner
- Division of Epidemiology, ICAR-Indian Veterinary Research Institute, Izatnagar, Bareilly, India
| | - Shiva Reddy Koti
- Department of Geoinformatics, Indian Institute of Remote Sensing, Dehradun, India
| | | | - Yashpal S Malik
- Division of Biological Standardization, ICAR-Indian Veterinary Research Institute, Izatnagar, Bareilly, India
| | - Dharmendra Kumar Sinha
- Division of Epidemiology, ICAR-Indian Veterinary Research Institute, Izatnagar, Bareilly, India
| | - Bhoj R Singh
- Division of Epidemiology, ICAR-Indian Veterinary Research Institute, Izatnagar, Bareilly, India
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Li Y, Dou Q, Lu Y, Xiang H, Yu X, Liu S. Effects of ambient temperature and precipitation on the risk of dengue fever: A systematic review and updated meta-analysis. ENVIRONMENTAL RESEARCH 2020; 191:110043. [PMID: 32810500 DOI: 10.1016/j.envres.2020.110043] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/24/2019] [Revised: 05/21/2020] [Accepted: 08/04/2020] [Indexed: 05/16/2023]
Abstract
OBJECTIVES We systematically reviewed the published studies on the relationship between dengue fever and meteorological factors and applied a meta-analysis to explore the effects of ambient temperature and precipitation on dengue fever. METHODS We completed the literature search by the end of September 1st, 2019 using databases including Science Direct, PubMed, Web of Science, and Google Scholar. We extracted relative risks (RRs) in selected studies and converted all effect estimates to the RRs per 1 °C increase in temperature and 10 mm increase in precipitation, and combined all standardized RRs together using random-effect meta-analysis. RESULTS Our results show that dengue fever was significantly associated with both temperature and precipitation. Our subgroup analyses suggested that the effect of temperature on dengue fever was most pronounced in high-income subtropical areas. The pooled RR of dengue fever associated with the maximum temperature was much lower than the overall effect. CONCLUSIONS Temperature and precipitation are important risk factors for dengue fever. Future studies should focus on factors that can distort the effects of temperature and precipitation.
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Affiliation(s)
- Yanbing Li
- School of Health Sciences, Wuhan University, 115 Donghu Road, 430071, Wuhan, China
| | - Qiujun Dou
- School of Health Sciences, Wuhan University, 115 Donghu Road, 430071, Wuhan, China
| | - Yuanan Lu
- Environmental Health Laboratory, Department of Public Health Sciences, University Hawaii at Manoa, 1960 East West Rd, Biomed Bldg, D105, Honolulu, USA
| | - Hao Xiang
- School of Health Sciences, Wuhan University, 115 Donghu Road, 430071, Wuhan, China
| | - Xuejie Yu
- School of Health Sciences, Wuhan University, 115 Donghu Road, 430071, Wuhan, China
| | - Suyang Liu
- School of Health Sciences, Wuhan University, 115 Donghu Road, 430071, Wuhan, China.
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Pramanik M, Singh P, Kumar G, Ojha VP, Dhiman RC. El Niño Southern Oscillation as an early warning tool for dengue outbreak in India. BMC Public Health 2020; 20:1498. [PMID: 33008350 PMCID: PMC7532593 DOI: 10.1186/s12889-020-09609-1] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/03/2020] [Accepted: 09/24/2020] [Indexed: 12/27/2022] Open
Abstract
BACKGROUND Dengue is rapidly expanding climate-sensitive mosquito-borne disease worldwide. Outbreaks of dengue occur in various parts of India as well but there is no tool to provide early warning. The current study was, therefore, undertaken to find out the link between El Niño, precipitation, and dengue cases, which could help in early preparedness for control of dengue. METHODS Data on Oceanic Niño Index (ONI) was extracted from CPC-IRI (USA) while the data on monthly rainfall was procured from India Meteorological Department. Data on annual dengue cases was taken from the website of National Vector Borne Disease Control Programme (NVBDCP). Correlation analysis was used to analyse the relationship between seasonal positive ONI, rainfall index and dengue case index based on past 20 years' state-level data. The dengue case index representing 'relative deviation from mean' was correlated to the 3 months average ONI. The computed r values of dengue case index and positive ONI were further interpreted using generated spatial correlation map. The short-term prediction of dengue probability map has been prepared based on phase-wise (El Niño, La Niña, and Neutral) 20 years averaged ONI. RESULTS A high correlation between positive ONI and dengue incidence was found, particularly in the states of Arunachal Pradesh, Chhattisgarh, Haryana, Uttarakhand, Andaman and Nicobar Islands, Delhi, Daman and Diu. The states like Assam, Himachal Pradesh, Meghalaya, Manipur, Mizoram, Jammu & Kashmir, Uttar Pradesh, Orissa, and Andhra Pradesh shown negative correlation between summer El Niño and dengue incidence. Two - three month lag was found between monthly 'rainfall index' and dengue cases at local-scale analysis. CONCLUSION The generated map signifies the spatial correlation between positive ONI and dengue case index, indicating positive correlation in the central part, while negative correlation in some coastal, northern, and north-eastern part of India. The findings offer a tool for early preparedness for undertaking intervention measures against dengue by the national programme at state level. For further improvement of results, study at micro-scale district level for finding month-wise association with Indian Ocean Dipole and local weather variables is desired for better explanation of dengue outbreaks in the states with 'no association'.
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Affiliation(s)
- Malay Pramanik
- ICMR-National Institute of Malaria Research, New Delhi, 110077, India
| | - Poonam Singh
- ICMR-National Institute of Malaria Research, New Delhi, 110077, India
| | - Gaurav Kumar
- ICMR-National Institute of Malaria Research, New Delhi, 110077, India
| | - V P Ojha
- ICMR-National Institute of Malaria Research, New Delhi, 110077, India
| | - Ramesh C Dhiman
- ICMR-National Institute of Malaria Research, New Delhi, 110077, India.
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Miley KM, Downs J, Beeman SP, Unnasch TR. Impact of the Southern Oscillation Index, Temperature, and Precipitation on Eastern Equine Encephalitis Virus Activity in Florida. JOURNAL OF MEDICAL ENTOMOLOGY 2020; 57:1604-1613. [PMID: 32436566 DOI: 10.1093/jme/tjaa084] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/24/2019] [Indexed: 06/11/2023]
Abstract
Eastern equine encephalitis virus (EEEV), an Alphavirus from family Togaviridae, is a highly pathogenic arbovirus affecting the eastern United States, especially Florida. Effects of the Southern Oscillation Index (SOI), precipitation, and cooling degree days on EEEV horse case data in Florida from 2004 to 2018 were modeled using distributed lag nonlinear models (DLNMs). The analysis was conducted at statewide and regional scales. DLNMs were used to model potential delayed effects of the covariates on monthly counts of horse cases. Both models confirmed a seasonal trend in EEEV transmission and found that precipitation, cooling degree days, and the SOI were all predictors of monthly numbers of horse cases. EEEV activity in horses was associated with higher amounts of rainfall during the month of transmission at the statewide scale, as well as the prior 3 mo at the regional scale, fewer cooling degree days during the month of transmission and the preceding 3 mo and high SOI values during the month and the previous 2 mo, and SOI values in the prior 2 to 8 mo. Horse cases were lower during El Niño winters but higher during the following summer, while La Niña winters were associated with higher numbers of cases and fewer during the following summer. At the regional scale, extremely low levels of precipitation were associated with a suppression of EEEV cases for 3 mo. Given the periodicity and potential predictability of El Niño Southern Oscillation (ENSO) cycles, precipitation, and temperature, these results may provide a method for predicting EEEV risk potential in Florida.
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Affiliation(s)
- Kristi M Miley
- Global Health Infectious Disease Research, University of South Florida, 3720 Spectrum Blvd, Suite 304, Tampa, FL
| | - Joni Downs
- School of Geosciences, University of South Florida, 4202 E Fowler Ave, Tampa, FL
| | - Sean P Beeman
- Global Health Infectious Disease Research, University of South Florida, 3720 Spectrum Blvd, Suite 304, Tampa, FL
| | - Thomas R Unnasch
- Global Health Infectious Disease Research, University of South Florida, 3720 Spectrum Blvd, Suite 304, Tampa, FL
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Harapan H, Yufika A, Anwar S, Te H, Hasyim H, Nusa R, Dhewantara PW, Mudatsir M. Effects of El Niño Southern Oscillation and Dipole Mode Index on Chikungunya Infection in Indonesia. Trop Med Infect Dis 2020; 5:E119. [PMID: 32708686 PMCID: PMC7558115 DOI: 10.3390/tropicalmed5030119] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/16/2020] [Accepted: 07/02/2020] [Indexed: 11/16/2022] Open
Abstract
The aim of this study was to assess the possible association of El Niño Southern Oscillation (ENSO) and Dipole Mode Index (DMI) on chikungunya incidence overtime, including the significant reduction in cases that was observed in 2017 in Indonesia. Monthly nation-wide chikungunya case reports were obtained from the Indonesian National Disease Surveillance database, and incidence rates (IR) and case fatality rate (CFR) were calculated. Monthly data of Niño3.4 (indicator used to represent the ENSO) and DMI between 2011 and 2017 were also collected. Correlations between monthly IR and CFR and Niño3.4 and DMI were assessed using Spearman's rank correlation. We found that chikungunya case reports declined from 1972 cases in 2016 to 126 cases in 2017, a 92.6% reduction; the IR reduced from 0.67 to 0.05 cases per 100,000 population. No deaths associated with chikungunya have been recorded since its re-emergence in Indonesia in 2001. There was no significant correlation between monthly Niño3.4 and chikungunya incidence with r = -0.142 (95%CI: -0.320-0.046), p = 0.198. However, there was a significant negative correlation between monthly DMI and chikungunya incidence, r = -0.404 (95%CI: -0.229--0.554) with p < 0.001. In conclusion, our initial data suggests that the climate variable, DMI but not Niño3.4, is likely associated with changes in chikungunya incidence. Therefore, further analysis with a higher resolution of data, using the cross-wavelet coherence approach, may provide more robust evidence.
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Affiliation(s)
- Harapan Harapan
- Medical Research Unit, School of Medicine, Universitas Syiah Kuala, Banda Aceh, Aceh 23111, Indonesia; (A.Y.); (M.M.)
- Department of Microbiology, School of Medicine, Universitas Syiah Kuala, Banda Aceh, Aceh 23111, Indonesia
- Tropical Disease Centre, School of Medicine, Universitas Syiah Kuala, Banda Aceh, Aceh 23111, Indonesia
| | - Amanda Yufika
- Medical Research Unit, School of Medicine, Universitas Syiah Kuala, Banda Aceh, Aceh 23111, Indonesia; (A.Y.); (M.M.)
- Department of Family Medicine, School of Medicine, Universitas Syiah Kuala, Banda Aceh, Aceh 23111, Indonesia
| | - Samsul Anwar
- Department of Statistics, Faculty of Mathematics and Natural Sciences, Universitas Syiah Kuala, Banda Aceh, Aceh 23111, Indonesia;
| | - Haypheng Te
- Siem Reap Provincial Health Department, Ministry of Health, Siem Reap 1710, Cambodia;
| | - Hamzah Hasyim
- Faculty of Public Health, Sriwijaya University, Indralaya, South Sumatra 30862, Indonesia;
| | - Roy Nusa
- Vector-Borne Disease Control, Research and Development Council, Ministry of Health, Jakarta 10560, Indonesia;
| | - Pandji Wibawa Dhewantara
- Pangandaran Unit of Health Research and Development, National Institute of Health Research and Development (NIHRD), Ministry of Health of Indonesia, West Java 46396, Indonesia;
- UQ Spatial Epidemiology Laboratory, School of Veterinary Science, The University of Queensland, Gatton, QLD 4343, Australia
| | - Mudatsir Mudatsir
- Medical Research Unit, School of Medicine, Universitas Syiah Kuala, Banda Aceh, Aceh 23111, Indonesia; (A.Y.); (M.M.)
- Department of Microbiology, School of Medicine, Universitas Syiah Kuala, Banda Aceh, Aceh 23111, Indonesia
- Tropical Disease Centre, School of Medicine, Universitas Syiah Kuala, Banda Aceh, Aceh 23111, Indonesia
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Prabodanie RAR, Schreider S, Cazelles B, Stone L. Coherence of dengue incidence and climate in the wet and dry zones of Sri Lanka. THE SCIENCE OF THE TOTAL ENVIRONMENT 2020; 724:138269. [PMID: 32408457 DOI: 10.1016/j.scitotenv.2020.138269] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/15/2019] [Revised: 03/26/2020] [Accepted: 03/26/2020] [Indexed: 05/14/2023]
Abstract
We studied the dynamics of dengue disease in two epidemic regions in Sri Lanka, the densely populated Colombo district representing the wet zone and the relatively less populated Batticaloa district representing the dry zone. Regional differences in disease dynamics were analysed against regional weather factors. Wavelets, Granger causality and regression methods were used. The difference between the dynamical features of these two regions may be explained by the differences in the climatic characteristics of the two regions. Wavelet analysis revealed that Colombo dengue incidence has 6 months periodicity while Batticaloa dengue incidence has 1 year periodicity. This is well explained by the dominant 6 months periodicity in Colombo rainfall and 1 year periodicity in Batticaloa rainfall. The association between dengue incidence and temperature was negative in dry Batticaloa and was insignificant in wet Colombo. Granger causality results indicated that rainfall, rainy days, relative humidity and wind speed can be used to predict Colombo dengue incidence while only rainfall and relative humidity were significant in Batticaloa. Negative binomial and linear regression models were used to identify the weather variables which best explain the variations in dengue incidence. Most recent available incidence data performed as best explanatory variables, outweighing the importance of past weather data. Therefore we recommend the health authorities to closely monitor the number of cases and to streamline recording procedures so that most recent data are available for early detection of epidemics. We also noted that epidemic responses to weather changes appear quickly in densely populated Colombo compared to less populated Batticaloa. The past dengue incidence and weather variables explain the dengue incidence better in Batticaloa than in Colombo and thus other exogenous factors such as population density and human mobility may be affecting Colombo dengue incidence.
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Affiliation(s)
- R A Ranga Prabodanie
- Mathematics, School of Science, RMIT University, Melbourne, Australia; Department of Industrial Management, Faculty of Applied Sciences, Wayamba University of Sri Lanka, Kuliyapitiya 60200, Sri Lanka.
| | - Sergei Schreider
- Mathematics, School of Science, RMIT University, Melbourne, Australia; Rutgers Business School, Rutgers University, NJ, United States
| | - Bernard Cazelles
- UMMISCO, UMI 209, Sorbonne Université-IRD, Paris, France; IBENS, UMR CNRS 8197, Eco-Evolution Mathématique, Ecole Normale Supérieure, Paris, France
| | - Lewi Stone
- Mathematics, School of Science, RMIT University, Melbourne, Australia; Biomathematics Unit, School of Zoology, Faculty of Life Sciences, Tel Aviv University, Tel Aviv-Yafo, Israel
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Subramanian R, Romeo-Aznar V, Ionides E, Codeço CT, Pascual M. Predicting re-emergence times of dengue epidemics at low reproductive numbers: DENV1 in Rio de Janeiro, 1986-1990. J R Soc Interface 2020; 17:20200273. [PMID: 32574544 PMCID: PMC7328382 DOI: 10.1098/rsif.2020.0273] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022] Open
Abstract
Predicting arbovirus re-emergence remains challenging in regions with limited off-season transmission and intermittent epidemics. Current mathematical models treat the depletion and replenishment of susceptible (non-immune) hosts as the principal drivers of re-emergence, based on established understanding of highly transmissible childhood diseases with frequent epidemics. We extend an analytical approach to determine the number of ‘skip’ years preceding re-emergence for diseases with continuous seasonal transmission, population growth and under-reporting. Re-emergence times are shown to be highly sensitive to small changes in low R0 (secondary cases produced from a primary infection in a fully susceptible population). We then fit a stochastic Susceptible–Infected–Recovered (SIR) model to observed case data for the emergence of dengue serotype DENV1 in Rio de Janeiro. This aggregated city-level model substantially over-estimates observed re-emergence times either in terms of skips or outbreak probability under forward simulation. The inability of susceptible depletion and replenishment to explain re-emergence under ‘well-mixed’ conditions at a city-wide scale demonstrates a key limitation of SIR aggregated models, including those applied to other arboviruses. The predictive uncertainty and high skip sensitivity to epidemiological parameters suggest a need to investigate the relevant spatial scales of susceptible depletion and the scaling of microscale transmission dynamics to formulate simpler models that apply at coarse resolutions.
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Affiliation(s)
- Rahul Subramanian
- Division of Biological Sciences, University of Chicago, Chicago, IL, USA
| | - Victoria Romeo-Aznar
- Department of Ecology and Evolution, and, University of Chicago, Chicago, IL, USA.,Manseuto Institute for Urban Innovation, University of Chicago, Chicago, IL, USA
| | - Edward Ionides
- Department of Statistics, University of Michigan, Ann Arbor, MI, USA
| | - Claudia T Codeço
- Programa de Computação Científica, Fundação Oswaldo Cruz, Rio de Janeiro, Brazil
| | - Mercedes Pascual
- Department of Ecology and Evolution, and, University of Chicago, Chicago, IL, USA.,Santa Fe Institute, Santa Fe, NM, USA
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