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Shebindu A, Kaveti D, Umutoni L, Kirk G, Burton MD, Jones CN. A programmable microfluidic platform to monitor calcium dynamics in microglia during inflammation. MICROSYSTEMS & NANOENGINEERING 2024; 10:106. [PMID: 39101003 PMCID: PMC11294448 DOI: 10.1038/s41378-024-00733-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/13/2023] [Revised: 04/01/2024] [Accepted: 05/22/2024] [Indexed: 08/06/2024]
Abstract
Neuroinflammation is characterized by the elevation of cytokines and adenosine triphosphate (ATP), which in turn activates microglia. These immunoregulatory molecules typically form gradients in vivo, which significantly influence microglial behaviors such as increasing calcium signaling, migration, phagocytosis, and cytokine secretion. Quantifying microglial calcium signaling in the context of inflammation holds the potential for developing precise therapeutic strategies for neurological diseases. However, the current calcium imaging systems are technically challenging to operate, necessitate large volumes of expensive reagents and cells, and model immunoregulatory molecules as uniform concentrations, failing to accurately replicate the in vivo microenvironment. In this study, we introduce a novel calcium monitoring micro-total analysis system (CAM-μTAS) designed to quantify calcium dynamics in microglia (BV2 cells) within defined cytokine gradients. Leveraging programmable pneumatically actuated lifting gate microvalve arrays and a Quake valve, CAM-μTAS delivers cytokine gradients to microglia, mimicking neuroinflammation. Our device automates sample handling and cell culture, enabling rapid media changes in just 1.5 s, thus streamlining the experimental workflow. By analyzing BV2 calcium transient latency to peak, we demonstrate location-dependent microglial activation patterns based on cytokine and ATP gradients, offering insights contrasting those of non-gradient-based perfusion systems. By harnessing advancements in microsystem technology to quantify calcium dynamics, we can construct simplified human models of neurological disorders, unravel the intricate mechanisms of cell-cell signaling, and conduct robust evaluations of novel therapeutics.
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Affiliation(s)
- Adam Shebindu
- Department of Bioengineering, University of Texas at Dallas, Richardson, TX 75080 USA
- Department of Biomedical Engineering, UT Southwestern Medical Center, Dallas, TX 75390 USA
| | - Durga Kaveti
- Department of Bioengineering, University of Texas at Dallas, Richardson, TX 75080 USA
| | - Linda Umutoni
- Department of Bioengineering, University of Texas at Dallas, Richardson, TX 75080 USA
| | - Gia Kirk
- Department of Bioengineering, University of Texas at Dallas, Richardson, TX 75080 USA
| | - Michael D. Burton
- Department of Neuroscience, University of Texas at Dallas, Richardson, TX 75080 USA
| | - Caroline N. Jones
- Department of Bioengineering, University of Texas at Dallas, Richardson, TX 75080 USA
- Department of Biomedical Engineering, UT Southwestern Medical Center, Dallas, TX 75390 USA
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2
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Rasekh M, Harrison S, Schobesberger S, Ertl P, Balachandran W. Reagent storage and delivery on integrated microfluidic chips for point-of-care diagnostics. Biomed Microdevices 2024; 26:28. [PMID: 38825594 DOI: 10.1007/s10544-024-00709-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 05/02/2024] [Indexed: 06/04/2024]
Abstract
Microfluidic-based point-of-care diagnostics offer several unique advantages over existing bioanalytical solutions, such as automation, miniaturisation, and integration of sensors to rapidly detect on-site specific biomarkers. It is important to highlight that a microfluidic POC system needs to perform a number of steps, including sample preparation, nucleic acid extraction, amplification, and detection. Each of these stages involves mixing and elution to go from sample to result. To address these complex sample preparation procedures, a vast number of different approaches have been developed to solve the problem of reagent storage and delivery. However, to date, no universal method has been proposed that can be applied as a working solution for all cases. Herein, both current self-contained (stored within the chip) and off-chip (stored in a separate device and brought together at the point of use) are reviewed, and their merits and limitations are discussed. This review focuses on reagent storage devices that could be integrated with microfluidic devices, discussing further issues or merits of these storage solutions in two different sections: direct on-chip storage and external storage with their application devices. Furthermore, the different microvalves and micropumps are considered to provide guidelines for designing appropriate integrated microfluidic point-of-care devices.
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Affiliation(s)
- Manoochehr Rasekh
- College of Engineering, Design and Physical Sciences, Brunel University London, Uxbridge, UB8 3PH, UK.
| | - Sam Harrison
- College of Engineering, Design and Physical Sciences, Brunel University London, Uxbridge, UB8 3PH, UK
| | - Silvia Schobesberger
- Faculty of Technical Chemistry, Institute of Applied Synthetic Chemistry, Vienna University of Technology, Getreidemarkt 9, 1060, Vienna, Austria
| | - Peter Ertl
- Faculty of Technical Chemistry, Institute of Applied Synthetic Chemistry, Vienna University of Technology, Getreidemarkt 9, 1060, Vienna, Austria
| | - Wamadeva Balachandran
- College of Engineering, Design and Physical Sciences, Brunel University London, Uxbridge, UB8 3PH, UK.
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3
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Akh L, Jung D, Frantz W, Bowman C, Neu AC, Ding X. Microfluidic pumps for cell sorting. BIOMICROFLUIDICS 2023; 17:051502. [PMID: 37736018 PMCID: PMC10511263 DOI: 10.1063/5.0161223] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/08/2023] [Accepted: 09/05/2023] [Indexed: 09/23/2023]
Abstract
Microfluidic cell sorting has shown promising advantages over traditional bulky cell sorting equipment and has demonstrated wide-reaching applications in biological research and medical diagnostics. The most important characteristics of a microfluidic cell sorter are its throughput, ease of use, and integration of peripheral equipment onto the chip itself. In this review, we discuss the six most common methods for pumping fluid samples in microfluidic cell sorting devices, present their advantages and drawbacks, and discuss notable examples of their use. Syringe pumps are the most commonly used method for fluid actuation in microfluidic devices because they are easily accessible but they are typically too bulky for portable applications, and they may produce unfavorable flow characteristics. Peristaltic pumps, both on- and off-chip, can produce reversible flow but they suffer from pulsatile flow characteristics, which may not be preferable in many scenarios. Gravity-driven pumping, and similarly hydrostatic pumping, require no energy input but generally produce low throughputs. Centrifugal flow is used to sort cells on the basis of size or density but requires a large external rotor to produce centrifugal force. Electroosmotic pumping is appealing because of its compact size but the high voltages required for fluid flow may be incompatible with live cells. Emerging methods with potential for applications in cell sorting are also discussed. In the future, microfluidic cell sorting methods will trend toward highly integrated systems with high throughputs and low sample volume requirements.
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Affiliation(s)
- Leyla Akh
- Biomedical Engineering Program, University of Colorado, Boulder, Colorado 80309, USA
| | - Diane Jung
- Biomedical Engineering Program, University of Colorado, Boulder, Colorado 80309, USA
| | - William Frantz
- Biomedical Engineering Program, University of Colorado, Boulder, Colorado 80309, USA
| | - Corrin Bowman
- Biomedical Engineering Program, University of Colorado, Boulder, Colorado 80309, USA
| | - Anika C. Neu
- Paul M. Rady Department of Mechanical Engineering, University of Colorado, Boulder, Colorado 80309, USA
| | - Xiaoyun Ding
- Author to whom correspondence should be addressed:
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Tsiamis A, Buchoux A, Mahon ST, Walton AJ, Smith S, Clarke DJ, Stokes AA. Design and Fabrication of a Fully-Integrated, Miniaturised Fluidic System for the Analysis of Enzyme Kinetics. MICROMACHINES 2023; 14:537. [PMID: 36984943 PMCID: PMC10051508 DOI: 10.3390/mi14030537] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/10/2023] [Revised: 02/23/2023] [Accepted: 02/24/2023] [Indexed: 06/18/2023]
Abstract
The lab-on-a-chip concept, enabled by microfluidic technology, promises the integration of multiple discrete laboratory techniques into a miniaturised system. Research into microfluidics has generally focused on the development of individual elements of the total system (often with relatively limited functionality), without full consideration for integration into a complete fully optimised and miniaturised system. Typically, the operation of many of the reported lab-on-a-chip devices is dependent on the support of a laboratory framework. In this paper, a demonstrator platform for routine laboratory analysis is designed and built, which fully integrates a number of technologies into a single device with multiple domains such as fluidics, electronics, pneumatics, hydraulics, and photonics. This facilitates the delivery of breakthroughs in research, by incorporating all physical requirements into a single device. To highlight this proposed approach, this demonstrator microsystem acts as a fully integrated biochemical assay reaction system. The resulting design determines enzyme kinetics in an automated process and combines reservoirs, three-dimensional fluidic channels, optical sensing, and electronics in a low-cost, low-power and portable package.
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Affiliation(s)
- Andreas Tsiamis
- School of Engineering, Institute for Integrated Micro and Nano Systems, The University of Edinburgh, The King’s Buildings, Edinburgh EH9 3FF, UK
| | - Anthony Buchoux
- School of Engineering, Institute for Multiscale Thermofluids, The University of Edinburgh, The King’s Buildings, Edinburgh EH9 3LJ, UK
| | - Stephen T. Mahon
- School of Engineering, Institute for Integrated Micro and Nano Systems, The University of Edinburgh, The King’s Buildings, Edinburgh EH9 3FF, UK
| | - Anthony J. Walton
- School of Engineering, Institute for Integrated Micro and Nano Systems, The University of Edinburgh, The King’s Buildings, Edinburgh EH9 3FF, UK
| | - Stewart Smith
- School of Engineering, Institute for Bio-Engineering, The University of Edinburgh, The King’s Buildings, Edinburgh EH9 3FF, UK
| | - David J. Clarke
- EaStCHEM School of Chemistry, The University of Edinburgh, Edinburgh EH9 3FJ, UK
| | - Adam A. Stokes
- School of Engineering, Institute for Integrated Micro and Nano Systems, The University of Edinburgh, The King’s Buildings, Edinburgh EH9 3FF, UK
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5
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Graphene-based optofluidic tweezers for refractive-index and size-based nanoparticle sorting, manipulation, and detection. Sci Rep 2023; 13:1975. [PMID: 36737494 PMCID: PMC9898258 DOI: 10.1038/s41598-023-29122-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/07/2022] [Accepted: 01/31/2023] [Indexed: 02/05/2023] Open
Abstract
This work proposes a novel design composed of graphene nanoribbons-based optofluidic tweezers to manipulate and sort bio-particles with radii below 2.5 nm. The suggested structure has been numerically investigated by the finite difference time domain (FDTD) method employing Maxwell's stress tensor analysis (MST). The finite element method (FEM) has been used to obtain the electrostatic response of the proposed structure. The tweezer main path is a primary channel in the center of the structure, where the microfluidic flow translates the nanoparticle toward this channel. Concerning the microfluid's drag force, the nanoparticles tend to move along the length of the main channel. The graphene nanoribbons are fixed near the main channel at different distances to exert optical forces on the moving nanoparticles in the perpendicular direction. In this regard, sub-channels embedding in the hBN layer on the Si substrate deviate bio-particles from the main path for particular nanoparticle sizes and indices. Intense hotspots with electric field enhancements up to 900 times larger than the incident light are realized inside and around the graphene ribbons. Adjusting the gap distance between the graphene nanoribbon and the main channel allows us to separate the individual particle with a specific size from others, thus guiding that in the desired sub-channel. Furthermore, we demonstrated that in a structure with a large gap between channels, particles experience weak field intensity, leading to a low optical force that is insufficient to detect, trap, and manipulate nanoparticles. By varying the chemical potential of graphene associated with the electric field intensity variations in the graphene ribbons, we realized tunability in sorting nanoparticles while structural parameters remained constant. In fact, by adjusting the graphene Fermi level via the applied gate voltage, nanoparticles with any desired radius will be quickly sorted. Moreover, we exhibited that the proposed structure could sort nanoparticles based on their refractive indices. Therefore, the given optofluidic tweezer can easily detect bio-particles, such as cancer cells and viruses of tiny size.
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Nawaz AA, Soteriou D, Xu CK, Goswami R, Herbig M, Guck J, Girardo S. Image-based cell sorting using focused travelling surface acoustic waves. LAB ON A CHIP 2023; 23:372-387. [PMID: 36620943 PMCID: PMC9844123 DOI: 10.1039/d2lc00636g] [Citation(s) in RCA: 8] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/11/2022] [Accepted: 11/21/2022] [Indexed: 05/27/2023]
Abstract
Sorting cells is an essential primary step in many biological and clinical applications such as high-throughput drug screening, cancer research and cell transplantation. Cell sorting based on their mechanical properties has long been considered as a promising label-free biomarker that could revolutionize the isolation of cells from heterogeneous populations. Recent advances in microfluidic image-based cell analysis combined with subsequent label-free sorting by on-chip actuators demonstrated the possibility of sorting cells based on their physical properties. However, the high purity of sorting is achieved at the expense of a sorting rate that lags behind the analysis throughput. Furthermore, stable and reliable system operation is an important feature in enabling the sorting of small cell fractions from a concentrated heterogeneous population. Here, we present a label-free cell sorting method, based on the use of focused travelling surface acoustic wave (FTSAW) in combination with real-time deformability cytometry (RT-DC). We demonstrate the flexibility and applicability of the method by sorting distinct blood cell types, cell lines and particles based on different physical parameters. Finally, we present a new strategy to sort cells based on their mechanical properties. Our system enables the sorting of up to 400 particles per s. Sorting is therefore possible at high cell concentrations (up to 36 million per ml) while retaining high purity (>92%) for cells with diverse sizes and mechanical properties moving in a highly viscous buffer. Sorting of small cell fraction from a heterogeneous population prepared by processing of small sample volume (10 μl) is also possible and here demonstrated by the 667-fold enrichment of white blood cells (WBCs) from raw diluted whole blood in a continuous 10-hour sorting experiment. The real-time analysis of multiple parameters together with the high sensitivity and high-throughput of our method thus enables new biological and therapeutic applications in the future.
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Affiliation(s)
- Ahmad Ahsan Nawaz
- Max Planck Institute for the Science of Light & Max-Planck-Zentrum für Physik und Medizin, Erlangen, Germany.
| | - Despina Soteriou
- Max Planck Institute for the Science of Light & Max-Planck-Zentrum für Physik und Medizin, Erlangen, Germany.
| | - Catherine K Xu
- Max Planck Institute for the Science of Light & Max-Planck-Zentrum für Physik und Medizin, Erlangen, Germany.
| | - Ruchi Goswami
- Max Planck Institute for the Science of Light & Max-Planck-Zentrum für Physik und Medizin, Erlangen, Germany.
| | - Maik Herbig
- Department of Chemistry, University of Tokyo, Tokyo, Japan
| | - Jochen Guck
- Max Planck Institute for the Science of Light & Max-Planck-Zentrum für Physik und Medizin, Erlangen, Germany.
| | - Salvatore Girardo
- Max Planck Institute for the Science of Light & Max-Planck-Zentrum für Physik und Medizin, Erlangen, Germany.
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7
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Sahin MA, Werner H, Udani S, Di Carlo D, Destgeer G. Flow lithography for structured microparticles: fundamentals, methods and applications. LAB ON A CHIP 2022; 22:4007-4042. [PMID: 35920614 DOI: 10.1039/d2lc00421f] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/15/2023]
Abstract
Structured microparticles, with unique shapes, customizable sizes, multiple materials, and spatially-defined chemistries, are leading the way for emerging 'lab on a particle' technologies. These microparticles with engineered designs find applications in multiplexed diagnostics, drug delivery, single-cell secretion assays, single-molecule detection assays, high throughput cytometry, micro-robotics, self-assembly, and tissue engineering. In this article we review state-of-the-art particle manufacturing technologies based on flow-assisted photolithography performed inside microfluidic channels. Important physicochemical concepts are discussed to provide a basis for understanding the fabrication technologies. These photolithography technologies are compared based on the structural as well as compositional complexity of the fabricated particles. Particles are categorized, from 1D to 3D particles, based on the number of dimensions that can be independently controlled during the fabrication process. After discussing the advantages of the individual techniques, important applications of the fabricated particles are reviewed. Lastly, a future perspective is provided with potential directions to improve the throughput of particle fabrication, realize new particle shapes, measure particles in an automated manner, and adopt the 'lab on a particle' technologies to other areas of research.
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Affiliation(s)
- Mehmet Akif Sahin
- Control and Manipulation of Microscale Living Objects, Central Institute for Translational Cancer Research (TranslaTUM), Department of Electrical and Computer Engineering, Technical University of Munich, Einsteinstraße 25, Munich 81675, Germany.
| | - Helen Werner
- Control and Manipulation of Microscale Living Objects, Central Institute for Translational Cancer Research (TranslaTUM), Department of Electrical and Computer Engineering, Technical University of Munich, Einsteinstraße 25, Munich 81675, Germany.
| | - Shreya Udani
- Department of Bioengineering, University of California, Los Angeles, California 90095, USA.
| | - Dino Di Carlo
- Department of Bioengineering, University of California, Los Angeles, California 90095, USA.
- Department of Mechanical and Aerospace Engineering, California NanoSystems Institute and Jonsson Comprehensive Cancer Center, University of California, Los Angeles, California 90095, USA
| | - Ghulam Destgeer
- Control and Manipulation of Microscale Living Objects, Central Institute for Translational Cancer Research (TranslaTUM), Department of Electrical and Computer Engineering, Technical University of Munich, Einsteinstraße 25, Munich 81675, Germany.
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Hua W, Mitchell K, Kariyawasam LS, Do C, Chen J, Raymond L, Valentin N, Coulter R, Yang Y, Jin Y. Three-Dimensional Printing in Stimuli-Responsive Yield-Stress Fluid with an Interactive Dual Microstructure. ACS APPLIED MATERIALS & INTERFACES 2022; 14:39420-39431. [PMID: 35973232 DOI: 10.1021/acsami.2c12465] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/15/2023]
Abstract
Yield-stress support bath-enabled three-dimensional (3D) printing has been widely used in recent years for diverse applications. However, current yield-stress fluids usually possess single microstructures and still face the challenges of on-demand adding and/or removing support bath materials during printing, constraining their application scope. This study aims to propose a concept of stimuli-responsive yield-stress fluids with an interactive dual microstructure as support bath materials. The microstructure from a yield-stress additive allows the fluids to present switchable states at different stresses, facilitating an embedded 3D printing process. The microstructure from stimuli-responsive polymers enables the fluids to have regulable rheological properties upon external stimuli, making it feasible to perfuse additional yield-stress fluids during printing and easily remove residual fluids after printing. A nanoclay-Pluronic F127 nanocomposite is studied as a thermosensitive yield-stress fluid. The key material properties are characterized to unveil the interactions in the formed dual microstructure and microstructure evolutions at different stresses and temperatures. Core scientific issues, including the filament formation principle, surface roughness control, and thermal effects of the newly added nanocomposite, are comprehensively investigated. Finally, three representative 3D structures, the Hall of Prayer, capsule, and tube with changing diameter, are successfully printed to validate the printing capability of stimuli-responsive yield-stress fluids for fabricating arbitrary architectures.
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Affiliation(s)
- Weijian Hua
- Department of Mechanical Engineering, University of Nevada Reno, Reno, Nevada 89557, United States
| | - Kellen Mitchell
- Department of Mechanical Engineering, University of Nevada Reno, Reno, Nevada 89557, United States
| | - Lasith S Kariyawasam
- Department of Chemistry, University of Nevada Reno, Reno, Nevada 89557, United States
| | - Changwoo Do
- Neutron Scattering Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee 37831, United States
| | - Jihua Chen
- Center for Nanophase Materials Sciences, Oak Ridge National Lab, Oak Ridge, Tennessee 37830, United States
| | - Lily Raymond
- Department of Mechanical Engineering, University of Nevada Reno, Reno, Nevada 89557, United States
| | - Naima Valentin
- Department of Mechanical Engineering, University of Nevada Reno, Reno, Nevada 89557, United States
| | - Ryan Coulter
- Department of Mechanical Engineering, University of Nevada Reno, Reno, Nevada 89557, United States
| | - Ying Yang
- Department of Chemistry, University of Nevada Reno, Reno, Nevada 89557, United States
| | - Yifei Jin
- Department of Mechanical Engineering, University of Nevada Reno, Reno, Nevada 89557, United States
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Zhang SY, Zhao J, Ni JJ, Li H, Quan ZZ, Qing H. Application and prospects of high-throughput screening for in vitro neurogenesis. World J Stem Cells 2022; 14:393-419. [PMID: 35949394 PMCID: PMC9244953 DOI: 10.4252/wjsc.v14.i6.393] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 12/10/2021] [Revised: 04/07/2022] [Accepted: 05/28/2022] [Indexed: 02/06/2023] Open
Abstract
Over the past few decades, high-throughput screening (HTS) has made great contributions to new drug discovery. HTS technology is equipped with higher throughput, minimized platforms, more automated and computerized operating systems, more efficient and sensitive detection devices, and rapid data processing systems. At the same time, in vitro neurogenesis is gradually becoming important in establishing models to investigate the mechanisms of neural disease or developmental processes. However, challenges remain in generating more mature and functional neurons with specific subtypes and in establishing robust and standardized three-dimensional (3D) in vitro models with neural cells cultured in 3D matrices or organoids representing specific brain regions. Here, we review the applications of HTS technologies on in vitro neurogenesis, especially aiming at identifying the essential genes, chemical small molecules and adaptive microenvironments that hold great prospects for generating functional neurons or more reproductive and homogeneous 3D organoids. We also discuss the developmental tendency of HTS technology, e.g., so-called next-generation screening, which utilizes 3D organoid-based screening combined with microfluidic devices to narrow the gap between in vitro models and in vivo situations both physiologically and pathologically.
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Affiliation(s)
- Shu-Yuan Zhang
- Key Laboratory of Molecular Medicine and Biotherapy in the Ministry of Industry and Information Technology, Department of Biology, School of Life Science, Beijing Institute of Technology, Beijing 100081, China
| | - Juan Zhao
- Aerospace Medical Center, Aerospace Center Hospital, Beijing 100049, China
| | - Jun-Jun Ni
- Key Laboratory of Molecular Medicine and Biotherapy in the Ministry of Industry and Information Technology, Department of Biology, School of Life Science, Beijing Institute of Technology, Beijing 100081, China
| | - Hui Li
- Key Laboratory of Molecular Medicine and Biotherapy in the Ministry of Industry and Information Technology, Department of Biology, School of Life Science, Beijing Institute of Technology, Beijing 100081, China
| | - Zhen-Zhen Quan
- Key Laboratory of Molecular Medicine and Biotherapy in the Ministry of Industry and Information Technology, Department of Biology, School of Life Science, Beijing Institute of Technology, Beijing 100081, China
| | - Hong Qing
- Key Laboratory of Molecular Medicine and Biotherapy in the Ministry of Industry and Information Technology, Department of Biology, School of Life Science, Beijing Institute of Technology, Beijing 100081, China
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11
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Castiaux AD, Selemani MA, Ward MA, Martin RS. Fully 3D printed fluidic devices with integrated valves and pumps for flow injection analysis. ANALYTICAL METHODS : ADVANCING METHODS AND APPLICATIONS 2021; 13:5017-5024. [PMID: 34643627 PMCID: PMC8638614 DOI: 10.1039/d1ay01569a] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
Abstract
The use of a PolyJet 3D printer to create a microfluidic device that has integrated valves and pumps is described. The process uses liquid support and stacked printing to result in fully printed devices that are ready to use within minutes of fabrication after minimal post-processing. A unique feature of PolyJet printing is the ability to incorporate several different materials of varying properties into one print. In this work, two commercially available materials were used: a rigid-transparent plastic material (VeroClear) was used to define the channel regions and the bulk of the device, while the pumps/valves were printed in a flexible, rubber-like material (Agilus30). The entire process, from initial design to testing takes less than 4 hours to complete. The performance of the valves and pumps were characterized by fluorescence microscopy. A flow injection analysis device that enabled the discrete injections of analyte plugs was created, with on-chip pumps being used to move the fluid streams. The injection process was found to be reproducible and linearly correlated with changes in analyte concentration. The utility was demonstrated with the injection and rapid lysis of fluorescently-labeled endothelial cells. The ability to produce a device with integrated pumps/valves in one process significantly adds to the applicability of 3D printing to create microfluidic devices for analytical measurements.
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Affiliation(s)
- Andre D Castiaux
- Department of Chemistry, Saint Louis University, USA
- Department of Chemistry, Center for Additive Manufacturing, Saint Louis University, 3501 Laclede Ave., St. Louis, MO, 63103, USA.
| | | | - Morgan A Ward
- Department of Chemistry, Saint Louis University, USA
| | - R Scott Martin
- Department of Chemistry, Saint Louis University, USA
- Department of Chemistry, Center for Additive Manufacturing, Saint Louis University, 3501 Laclede Ave., St. Louis, MO, 63103, USA.
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12
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Vyawahare S, Brundage M, Kijac A, Gutierrez M, de Geus M, Sinha S, Homyk A. Sorting droplets into many outlets. LAB ON A CHIP 2021; 21:4262-4273. [PMID: 34617550 DOI: 10.1039/d1lc00493j] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
Abstract
Droplet microfluidics is a commercially successful technology, widely used in single cell sequencing and droplet PCR. Combining droplet making with droplet sorting has also been demonstrated, but so far found limited use, partly due to difficulties in scaling manufacture with injection molded plastics. We introduce a droplet sorting system with several new elements, including: 1) an electrode design combining metallic and ionic liquid parts, 2) a modular, multi-sorting fluidic design with features for keeping inter-droplet distances constant, 3) using timing parameters calculated from fluorescence or scatter signal triggers to precisely actuate dozens of sorting electrodes, 4) droplet collection techniques, including ability to collect a single droplet, and 5) a new emulsion breaking method to collect aqueous samples for downstream analysis. We use these technologies to build a fluorescence based cell sorter that can sort with high (>90%) purity. We also show that these microfluidic designs can be translated into injection molded thermoplastic, suitable for industrial production. Finally, we tally the advantages and limitations of these devices.
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Affiliation(s)
- Saurabh Vyawahare
- Verily Life Sciences LLC, 249 E. Grand Avenue, South San Francisco, CA 94080, USA.
| | - Michael Brundage
- Verily Life Sciences LLC, 249 E. Grand Avenue, South San Francisco, CA 94080, USA.
| | - Aleksandra Kijac
- Verily Life Sciences LLC, 249 E. Grand Avenue, South San Francisco, CA 94080, USA.
| | - Michael Gutierrez
- Verily Life Sciences LLC, 249 E. Grand Avenue, South San Francisco, CA 94080, USA.
| | - Martina de Geus
- Verily Life Sciences LLC, 249 E. Grand Avenue, South San Francisco, CA 94080, USA.
| | - Supriyo Sinha
- Verily Life Sciences LLC, 249 E. Grand Avenue, South San Francisco, CA 94080, USA.
| | - Andrew Homyk
- Verily Life Sciences LLC, 249 E. Grand Avenue, South San Francisco, CA 94080, USA.
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13
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Liao Y, Mechulam Y, Lassalle-Kaiser B. A millisecond passive micromixer with low flow rate, low sample consumption and easy fabrication. Sci Rep 2021; 11:20119. [PMID: 34635693 PMCID: PMC8505571 DOI: 10.1038/s41598-021-99471-x] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/20/2021] [Accepted: 08/17/2021] [Indexed: 11/30/2022] Open
Abstract
Fast mixing of small volumes of solutions in microfluidic devices is essential for an accurate control and observation of the dynamics of a reaction in biological or chemical studies. It is often, however, a challenging task, as the Reynolds number (Re) in microscopic devices is typically < 100. In this report, we detail a novel mixer based on the “staggered herring bone” (SHB) pattern and “split-recombination” strategies with an optimized geometry, the periodic rotation of the flow structure can be controlled and recombined in a way that the vortices and phase shifts of the flow induce intertwined lamellar structures, thus increasing the contact surface and enhancing mixing. The optimization improves the mixing while using a low flow rate, hence a small volume for mixing and moderate pressure drops. The performances of the patterns were first simulated using COMSOL Multiphysics under different operating conditions. The simulation indicates that at very low flow rate (1–12 µL·min−1) and Re (3.3–40), as well as a very small working volume (~ 3 nL), a very good mixing (~ 98%) can be achieved in the ms time range (4.5–78 ms). The most promising design was then visualized experimentally, showing results that are consistent with the outcomes of the simulations. Importantly, the devices were fabricated using a classical soft-lithography method, as opposed to additive manufacturing often used to generate complex mixing structures. This new device minimizes the sample consumption and could therefore be applied for studies using precious samples.
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Affiliation(s)
- Yuanyuan Liao
- Synchrotron SOLEIL, l'Orme des Merisiers, 91192, Gif-sur-Yvette, France. .,IamFluidics BV, High Tech Factory, De Veldmaat 17, 7522 NM, Enschede, The Netherlands.
| | - Yves Mechulam
- Laboratoire de Biologie Structurale de la Cellule, BIOC, Ecole Polytechnique, CNRS, Institut Polytechnique de Paris, 91128, Palaiseau Cedex, France
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14
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Cortés-Llanos B, Wang Y, Sims CE, Allbritton NL. A technology of a different sort: microraft arrays. LAB ON A CHIP 2021; 21:3204-3218. [PMID: 34346456 PMCID: PMC8387436 DOI: 10.1039/d1lc00506e] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
Abstract
A common procedure performed throughout biomedical research is the selection and isolation of biological entities such as organelles, cells and organoids from a mixed population. In this review, we describe the development and application of microraft arrays, an analysis and isolation platform which enables a vast range of criteria and strategies to be used when separating biological entities. The microraft arrays are comprised of elastomeric microwells with detachable polymer bases (microrafts) that act as capture and culture sites as well as supporting carriers during cell isolation. The technology is elegant in its simplicity and can be implemented for samples possessing tens to millions of objects yielding a flexible platform for applications such as single-cell RNA sequencing, subcellular organelle capture and assay, high-throughput screening and development of CRISPR gene-edited cell lines, and organoid manipulation and selection. The transparent arrays are compatible with a multitude of imaging modalities enabling selection based on 2D or 3D spatial phenotypes or temporal properties. Each microraft can be individually isolated on demand with retention of high viability due to the near zero hydrodynamic stress imposed upon the cells during microraft release, capture and deposition. The platform has been utilized as a simple manual add-on to a standard microscope or incorporated into fully automated instruments that implement state-of-the-art imaging algorithms and machine learning. The vast array of selection criteria enables separations not possible with conventional sorting methods, thus garnering widespread interest in the biological and pharmaceutical sciences.
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15
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Zeraatkar M, de Tullio MD, Percoco G. Fused Filament Fabrication (FFF) for Manufacturing of Microfluidic Micromixers: An Experimental Study on the Effect of Process Variables in Printed Microfluidic Micromixers. MICROMACHINES 2021; 12:mi12080858. [PMID: 34442481 PMCID: PMC8399612 DOI: 10.3390/mi12080858] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/13/2021] [Revised: 07/16/2021] [Accepted: 07/19/2021] [Indexed: 12/13/2022]
Abstract
The need for accessible and inexpensive microfluidic devices requires new manufacturing methods and materials as a replacement for traditional soft lithography and polydimethylsiloxane (PDMS). Recently, with the advent of modern additive manufacturing (AM) techniques, 3D printing has attracted attention for its use in the fabrication of microfluidic devices and due to its automated, assembly-free 3D fabrication, rapidly decreasing cost, and fast-improving resolution and throughput. Here, fused filament fabrication (FFF) 3D printing was used to create microfluidic micromixers and enhance the mixing process, which has been identified as a challenge in microfluidic devices. A design of experiment (DoE) was performed on the effects of studied parameters in devices that were printed by FFF. The results of the colorimetric approach showed the effects of different parameters on the mixing process and on the enhancement of the mixing performance in printed devices. The presence of the geometrical features on the microchannels can act as ridges due to the nature of the FFF process. In comparison to passive and active methods, no complexity was added in the fabrication process, and the ridges are an inherent property of the FFF process.
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16
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Tang J, Cao X, Qiu G, deMello A, Wang J. Optical-Switch-Enabled Microfluidics for Sensitive Multichannel Colorimetric Analysis. Anal Chem 2021; 93:6784-6791. [PMID: 33877822 DOI: 10.1021/acs.analchem.1c00674] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
Abstract
The implementation of colorimetric analysis within microfluidic environments engenders significant benefits with respect to reduced sample and reagent consumption, system miniaturization, and real-time measurement of flowing samples. That said, conventional approaches to colorimetric analysis within microfluidic channels are hampered by short optical pathlengths and single-channel configurations, which lead to poor detection sensitivities and low analytical throughputs. Although the use of multiplexed light source/photodetector modules allows for multichannel analysis, such configurations significantly increase both instrument complexity and cost. To address these issues, we present a four-channel colorimetric measurement scheme within an optical-switch-enabled microfluidic chip (OSEMC) fabricated by two-photon stereolithography. The integration of optical switches enables sequential signal readout from each detection channel, and thus, only a single light source and a photodetector are required for operation. Optical switches can be controlled in a bespoke manner by changing the medium in the switch channel between a "light-transmitting" fluid and a "light-blocking" fluid using pneumatic microvalves. Such optical switches are characterized by fast response times (approximately 200 ms), tunable switching frequencies (between 0.1 and 1.0 Hz studied), and excellent stability. Operational performance demonstrates both good sensitivity and reproducibility through the colorimetric analysis of nitrite and ammonium samples using four detection channels. Furthermore, the use of OSEMC for parallel and real-time analysis of flowing samples is investigated via characterization of the adsorption kinetics of tartrazine on activated charcoal and the catalytic reaction kinetics of horseradish peroxidase (HRP).
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Affiliation(s)
- Jiukai Tang
- Institute of Environmental Engineering, ETH Zürich, Zürich 8093, Switzerland.,Laboratory for Advanced Analytical Technologies, Empa, Swiss Federal Laboratories for Materials Science and Technology, Dübendorf 8600, Switzerland
| | - Xiaobao Cao
- Institute of Chemical and Bioengineering, ETH Zürich, Vladimir Prelog Weg 1, Zürich 8093, Switzerland
| | - Guangyu Qiu
- Institute of Environmental Engineering, ETH Zürich, Zürich 8093, Switzerland.,Laboratory for Advanced Analytical Technologies, Empa, Swiss Federal Laboratories for Materials Science and Technology, Dübendorf 8600, Switzerland
| | - Andrew deMello
- Institute of Chemical and Bioengineering, ETH Zürich, Vladimir Prelog Weg 1, Zürich 8093, Switzerland
| | - Jing Wang
- Institute of Environmental Engineering, ETH Zürich, Zürich 8093, Switzerland.,Laboratory for Advanced Analytical Technologies, Empa, Swiss Federal Laboratories for Materials Science and Technology, Dübendorf 8600, Switzerland
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17
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BIO-INSPIRED MAGNETIC BEADS FOR ISOLATION OF SPERM FROM HETEROGENOUS SAMPLES IN FORENSIC APPLICATIONS. Forensic Sci Int Genet 2020; 52:102451. [PMID: 33556896 DOI: 10.1016/j.fsigen.2020.102451] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/25/2020] [Revised: 11/26/2020] [Accepted: 12/02/2020] [Indexed: 12/23/2022]
Abstract
Rapid and efficient processing of sexual assault evidence will accelerate forensic investigation and decrease casework backlogs. The standardized protocols currently used in forensic laboratories require the continued innovation to handle the increasing number and complexity of samples being submitted to forensic labs. Here, we present a new technique leveraging the integration of a bio-inspired oligosaccharide (i.e., Sialyl-LewisX) with magnetic beads that provides a rapid, inexpensive, and easy-to-use strategy that can potentially be adapted with current differential extraction practice in forensics labs. This platform (i) selectively captures sperm; (ii) is sensitive within the forensic cut-off; (iii) provides a cost effective solution that can be automated with existing laboratory platforms; and (iv) handles small volumes of sample (∼200 μL). This strategy can rapidly isolate sperm within 25 minutes of total processing that will prepare the extracted sample for downstream forensic analysis and ultimately help accelerate forensic investigation and reduce casework backlogs.
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18
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Cai K, Mankar S, Maslova A, Ajiri T, Yotoriyama T. Amplified piezoelectrically actuated on-chip flow switching for a rapid and stable microfluidic fluorescence activated cell sorter. RSC Adv 2020; 10:40395-40405. [PMID: 35520855 PMCID: PMC9057478 DOI: 10.1039/d0ra04919k] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/04/2020] [Accepted: 10/25/2020] [Indexed: 01/22/2023] Open
Abstract
With the potential to avoid cross-contamination, eliminate bio-aerosols, and minimize device footprints, microfluidic fluorescence-activated cell sorting (μ-FACS) devices could become the platform for the next generation cell sorter. Here, we report an on-chip flow switching based μ-FACS mechanism with piezoelectric actuation as a fast and robust sorting solution. A microfluidic chip with bifurcate configuration and displacement amplified piezoelectric microvalves has been developed to build the μ-FACS system. Rare fluorescent microparticles of different sizes have been significantly enriched from a purity of ∼0.5% to more than 90%. An enrichment of 150-fold from ∼0.6% to ∼91% has also been confirmed for fluorescently labeled MCF-7 breast cancer cells from Jurkat cells, while viability after sorting was maintained. Taking advantage of its simple structure, low cost, fast response, and reliable flow regulation, the proposed μ-FACS system delivers a new option that can meet the requirements of sorting performance, target selectivity, device lifetime, and cost-effectiveness of implementation.
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Affiliation(s)
- Kunpeng Cai
- Central Research Laboratories, Sysmex Corporation 4-4-4 Takatsukadai, Nishi-ku Kobe 651-2271 Japan
| | - Shruti Mankar
- Central Research Laboratories, Sysmex Corporation 4-4-4 Takatsukadai, Nishi-ku Kobe 651-2271 Japan
| | - Anastasia Maslova
- Central Research Laboratories, Sysmex Corporation 4-4-4 Takatsukadai, Nishi-ku Kobe 651-2271 Japan
| | - Taiga Ajiri
- Central Research Laboratories, Sysmex Corporation 4-4-4 Takatsukadai, Nishi-ku Kobe 651-2271 Japan
| | - Tasuku Yotoriyama
- Central Research Laboratories, Sysmex Corporation 4-4-4 Takatsukadai, Nishi-ku Kobe 651-2271 Japan
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19
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Wang X, Agasid MT, Baker CA, Aspinwall CA. Surface Modification of Glass/PDMS Microfluidic Valve Assemblies Enhances Valve Electrical Resistance. ACS APPLIED MATERIALS & INTERFACES 2019; 11:34463-34470. [PMID: 31496217 PMCID: PMC7719350 DOI: 10.1021/acsami.9b12342] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
Microfluidic instrumentation offers unique advantages in biotechnology applications including reduced sample and reagent consumption, rapid mixing and reaction times, and a high degree of process automation. As dimensions decrease, the ratio of surface area to volume within a fluidic architecture increases, which gives rise to some of the unique advantages inherent to microfluidics. Thus, manipulation of surface characteristics presents a promising approach to tailor the performance of microfluidic systems. Microfluidic valves are essential components in a number of small volume applications and for automated microfluidic platforms, but rigorous evaluation of the sealing quality of these valves is often overlooked. In this work, the glass valve seat of hybrid glass/PDMS microfluidic valves was surface modified with hydrophobic silanes, octyldimethylchlorosilane (ODCS) or (tridecafluoro-1,1,2,2-tetrahydrooctyl)dimethylchlorosilane (PFDCS), to investigate the effect of surface energy on electrical resistance of valves. Valves with ODCS- or PFDCS-modified valve seats both exhibited >70-fold increases in electrical resistance (>500 GΩ) when compared to the same valve design with unmodified glass valve seats (7 ± 3 GΩ), indicative of higher sealing capacity. The opening times for valves with ODCS- or PFDCS-modified valve seats was ca. 5× shorter compared to unmodified valve seats, whereas the closing time was up to 8× longer for modified valve seats, although the total closing time was ≤1.5 s, compatible with numerous microfluidic valving applications. Surface modified valve assemblies offered sufficient electrical resistance to isolate sub-pA current signals resulting from electrophysiology measurement of α-hemolysin conductance in a suspended lipid bilayer. This approach is well-suited for the design of novel microfluidic architectures that integrate fluidic manipulations with electrophysiological or electrochemical measurements.
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Affiliation(s)
- Xuemin Wang
- Department of Chemistry and Biochemistry, University of Arizona, Tucson, Arizona, 85721, United States
| | - Mark T. Agasid
- Department of Chemistry and Biochemistry, University of Arizona, Tucson, Arizona, 85721, United States
| | - Christopher A. Baker
- Department of Chemistry and Biochemistry, University of Arizona, Tucson, Arizona, 85721, United States
- Department of Chemistry, University of Tennessee, Knoxville, Tennessee, 37996, United States
| | - Craig A. Aspinwall
- Department of Chemistry and Biochemistry, University of Arizona, Tucson, Arizona, 85721, United States
- BIO5 Institute, University of Arizona, Tucson, Arizona, 85721, United States
- Department of Biomedical Engineering, University of Arizona, Tucson, Arizona, 85721, United States
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20
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Thomas RSW, Mitchell PD, Oreffo ROC, Morgan H, Green NG. Image-based sorting and negative dielectrophoresis for high purity cell and particle separation. Electrophoresis 2019; 40:2718-2727. [PMID: 31206722 DOI: 10.1002/elps.201800489] [Citation(s) in RCA: 23] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/19/2018] [Revised: 05/21/2019] [Accepted: 05/21/2019] [Indexed: 01/27/2023]
Abstract
Microelectrode arrays are used to sort single fluorescently labeled cells and particles as they flow through a microfluidic channel using dielectrophoresis. Negative dielectrophoresis is used to create a "Dielectrophoretic virtual channel" that runs along the center of the microfluidic channel. By switching the polarity of the electrodes, the virtual channel can be dynamically reconfigured to direct particles along a different path. This is demonstrated by sorting particles into two microfluidic outlets, controlled by an automated system that interprets video data from a color camera and makes complex sorting decisions based on color, intensity, size, and shape. This enables the rejection of particle aggregates and other impurities, and the system is optimized to isolate high purity populations from a heterogeneous sample. Green beads are isolated from an excess of red beads with 100% purity at a rate of up to 0.9 particles per second, in addition application to the sorting of osteosarcoma and human bone marrow cells is evidenced. The extension of Dielectrophoretic Virtual Channels to an arbitrary number of sorting outputs is examined, with design, simulation, and experimental verification of two alternate geometries presented and compared.
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Affiliation(s)
- Rupert S W Thomas
- School of Electronics and Computer Science, University of Southampton Highfield, Southampton, UK
| | - Peter D Mitchell
- Bone and Joint Research Group, Centre for Human Development, Stem Cells and Regeneration, Human Development and Health, Institute of Developmental Sciences, Faculty of Medicine, University of Southampton, UK
| | - Richard O C Oreffo
- Bone and Joint Research Group, Centre for Human Development, Stem Cells and Regeneration, Human Development and Health, Institute of Developmental Sciences, Faculty of Medicine, University of Southampton, UK
| | - Hywel Morgan
- School of Electronics and Computer Science, University of Southampton Highfield, Southampton, UK.,Institute for Life Sciences, University of Southampton Highfield, Southampton, UK
| | - Nicolas G Green
- School of Electronics and Computer Science, University of Southampton Highfield, Southampton, UK
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21
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Abstract
Microfluidics shows a great importance in fluid control in biomedicine area. Recently, a programmable soft microfluidic system for applications of pharmacology and optogenetics is reported in Cell. Based on the theory of thermal expansion, we established an analytic model to characterize the injection process of the microfluidic systems. Finite element analyses (FEA) were employed to validate this model. The comparison between the analytic model and FEA well demonstrates the practicality of the analytic model. We also make a parametric analysis of sphere radius, central angle and expandable layer thickness on the infusion volume of the system to optimize the design.
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Affiliation(s)
- Yan Shi
- State Key Laboratory of Mechanics and Control of Mechanical Structures, Nanjing University of Aeronautics & Astronautics, Nanjing, 210016, China.
| | - Qian Wu
- State Key Laboratory of Mechanics and Control of Mechanical Structures, Nanjing University of Aeronautics & Astronautics, Nanjing, 210016, China
| | - Dongyang Sun
- College of Aerospace Engineering, Chongqing University, Chongqing, 400044, China
| | - Cunfa Gao
- State Key Laboratory of Mechanics and Control of Mechanical Structures, Nanjing University of Aeronautics & Astronautics, Nanjing, 210016, China
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22
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Yazdi SG, Geoghegan PH, Docherty PD, Jermy M, Khanafer A. A Review of Arterial Phantom Fabrication Methods for Flow Measurement Using PIV Techniques. Ann Biomed Eng 2018; 46:1697-1721. [DOI: 10.1007/s10439-018-2085-8] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/22/2018] [Accepted: 06/25/2018] [Indexed: 12/21/2022]
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23
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Sohrabi S, Tan J, Yunus DE, He R, Liu Y. Label-free sorting of soft microparticles using a bioinspired synthetic cilia array. BIOMICROFLUIDICS 2018; 12:042206. [PMID: 29861817 PMCID: PMC5962446 DOI: 10.1063/1.5022500] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/16/2018] [Accepted: 04/10/2018] [Indexed: 05/25/2023]
Abstract
Isolating cells of interest from a heterogeneous population has been of critical importance in biological studies and clinical applications. In this study, a novel approach is proposed for utilizing an active ciliary system in microfluidic devices to separate particles based on their physical properties. In this approach, the bottom of the microchannel is covered with an equally spaced cilia array of various patterns which is actuated by an external stimuli. 3D simulations are carried out to study cilia-particle interaction and isolation dynamic in a microfluidic channel. It is observed that these elastic hair-like filaments can influence particle's trajectories differently depending on their biophysical properties. This modeling study utilizes immersed boundary method coupled with the lattice Boltzmann method. Soft particles and cilia are implemented through the spring connected network model and point-particle scheme, respectively. It is shown that cilia array with proper stimulation is able to continuously and non-destructively separate cells into subpopulations based on their size, shape, and stiffness. At the end, a design map for fabrication of a programmable microfluidic device capable of isolating various subpopulations of cells is developed. This biocompatible, label-free design can separate cells/soft microparticles with high throughput which can greatly complement existing separation technologies.
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Affiliation(s)
- Salman Sohrabi
- Lewis-Sigler Institute for Integrative Genomics, Princeton University, Princeton, New Jersey 08544, USA
| | - Jifu Tan
- Department of Mechanical Engineering, Northern Illinois University, DeKalb, Illinois 60115, USA
| | - Doruk Erdem Yunus
- Department of Mechanical Engineering, Bursa Technical University, Bursa, Turkey
| | - Ran He
- Department of Mechanical Engineering and Mechanics, Lehigh University, Bethlehem, Pennsylvania 18015, USA
| | - Yaling Liu
- Author to whom correspondence should be addressed:
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24
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Shrirao AB, Fritz Z, Novik EM, Yarmush GM, Schloss RS, Zahn JD, Yarmush ML. Microfluidic flow cytometry: The role of microfabrication methodologies, performance and functional specification. TECHNOLOGY 2018; 6:1-23. [PMID: 29682599 PMCID: PMC5907470 DOI: 10.1142/s2339547818300019] [Citation(s) in RCA: 26] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/03/2023]
Abstract
Flow cytometry is an invaluable tool utilized in modern biomedical research and clinical applications requiring high throughput, high resolution particle analysis for cytometric characterization and/or sorting of cells and particles as well as for analyzing results from immunocytometric assays. In recent years, research has focused on developing microfluidic flow cytometers with the motivation of creating smaller, less expensive, simpler, and more autonomous alternatives to conventional flow cytometers. These devices could ideally be highly portable, easy to operate without extensive user training, and utilized for research purposes and/or point-of-care diagnostics especially in limited resource facilities or locations requiring on-site analyses. However, designing a device that fulfills the criteria of high throughput analysis, automation and portability, while not sacrificing performance is not a trivial matter. This review intends to present the current state of the field and provide considerations for further improvement by focusing on the key design components of microfluidic flow cytometers. The recent innovations in particle focusing and detection strategies are detailed and compared. This review outlines performance matrix parameters of flow cytometers that are interdependent with each other, suggesting trade offs in selection based on the requirements of the applications. The ongoing contribution of microfluidics demonstrates that it is a viable technology to advance the current state of flow cytometry and develop automated, easy to operate and cost-effective flow cytometers.
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Affiliation(s)
- Anil B Shrirao
- Department of Biomedical Engineering, Rutgers University, 599, Taylor Road, Piscataway, NJ 08854
| | - Zachary Fritz
- Department of Biomedical Engineering, Rutgers University, 599, Taylor Road, Piscataway, NJ 08854
| | - Eric M Novik
- Hurel Corporation, 671, Suite B, U.S. Highway 1, North Brunswick, NJ 08902
| | - Gabriel M Yarmush
- Department of Biomedical Engineering, Rutgers University, 599, Taylor Road, Piscataway, NJ 08854
| | - Rene S Schloss
- Department of Biomedical Engineering, Rutgers University, 599, Taylor Road, Piscataway, NJ 08854
| | - Jeffrey D Zahn
- Department of Biomedical Engineering, Rutgers University, 599, Taylor Road, Piscataway, NJ 08854
| | - Martin L Yarmush
- Department of Biomedical Engineering, Rutgers University, 599, Taylor Road, Piscataway, NJ 08854
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25
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An integrated microfluidic device for the sorting of yeast cells using image processing. Sci Rep 2018; 8:3550. [PMID: 29476103 PMCID: PMC5824950 DOI: 10.1038/s41598-018-21833-9] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/10/2017] [Accepted: 02/01/2018] [Indexed: 12/27/2022] Open
Abstract
The process of detection and separation of yeast cells based on their morphological characteristics is critical to the understanding of cell division cycles, which is of vital importance to the understanding of some diseases such as cancer. The traditional process of manual detection is usually tedious and inconsistent. This paper presents a microfluidic device integrated with microvalves for fluid control for the sorting of yeast cells using image processing algorithms and confirmation based on their fluorescent tag. The proposed device is completely automated, low cost and easy to implement in an academic research setting. Design details of the integrated microfluidic system are highlighted in this paper, along with experimental validation. Real time cell sorting was demonstrated with a cell detection rate of 12 cells per minute.
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26
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Zhao J, You Z. Spark-generated microbubble cell sorter for microfluidic flow cytometry. Cytometry A 2018; 93:222-231. [DOI: 10.1002/cyto.a.23296] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/08/2017] [Revised: 09/27/2017] [Accepted: 11/20/2017] [Indexed: 12/18/2022]
Affiliation(s)
- Jingjing Zhao
- State Key Laboratory of Precision Measurement Technology and Instrument; Department of Precision Instrument, Tsinghua University; Beijing 100084 People's Republic of China
- Department of Precision Instrument; Tsinghua University; Beijing 100084 People's Republic of China
- Beijing Laboratory for Biomedical Detection Technology and Instrument, Department of Precision Instrument; Tsinghua University; Beijing 100084 People's Republic of China
| | - Zheng You
- State Key Laboratory of Precision Measurement Technology and Instrument; Department of Precision Instrument, Tsinghua University; Beijing 100084 People's Republic of China
- Department of Precision Instrument; Tsinghua University; Beijing 100084 People's Republic of China
- Beijing Laboratory for Biomedical Detection Technology and Instrument, Department of Precision Instrument; Tsinghua University; Beijing 100084 People's Republic of China
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27
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Caen O, Schütz S, Jammalamadaka MSS, Vrignon J, Nizard P, Schneider TM, Baret JC, Taly V. High-throughput multiplexed fluorescence-activated droplet sorting. MICROSYSTEMS & NANOENGINEERING 2018; 4:33. [PMID: 31057921 PMCID: PMC6220162 DOI: 10.1038/s41378-018-0033-2] [Citation(s) in RCA: 38] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/05/2018] [Revised: 07/05/2018] [Accepted: 07/05/2018] [Indexed: 05/02/2023]
Abstract
Fluorescence-activated droplet sorting (FADS) is one of the most important features provided by droplet-based microfluidics. However, to date, it does not allow to compete with the high-throughput multiplexed sorting capabilities offered by flow cytometery. Here, we demonstrate the use of a dielectrophoretic-based FADS, allowing to sort up to five different droplet populations simultaneously. Our system provides means to select droplets of different phenotypes in a single experimental run to separate initially heterogeneous populations. Our experimental results are rationalized with the help of a numerical model of the actuation of droplets in electric fields providing guidelines for the prediction of sorting designs for upscaled or downscaled microsystems.
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Affiliation(s)
- Ouriel Caen
- INSERM UMR-S1147, CNRS SNC5014, Paris Descartes University, Equipe labellisée Ligue Nationale contre le cancer, Paris, France
| | - Simon Schütz
- Emergent Complexity in Physical Systems Laboratory (ECPS), Ecole Polytechnique Fédérale de Lausanne, 1015 Lausanne, Switzerland
| | - M. S. Suryateja Jammalamadaka
- INSERM UMR-S1147, CNRS SNC5014, Paris Descartes University, Equipe labellisée Ligue Nationale contre le cancer, Paris, France
| | - Jérémy Vrignon
- CNRS, University Bordeaux, CRPP, UMR 5031, 115 Avenue Schweitzer, 33600 Pessac, France
| | - Philippe Nizard
- INSERM UMR-S1147, CNRS SNC5014, Paris Descartes University, Equipe labellisée Ligue Nationale contre le cancer, Paris, France
| | - Tobias M. Schneider
- Emergent Complexity in Physical Systems Laboratory (ECPS), Ecole Polytechnique Fédérale de Lausanne, 1015 Lausanne, Switzerland
| | - Jean-Christophe Baret
- CNRS, University Bordeaux, CRPP, UMR 5031, 115 Avenue Schweitzer, 33600 Pessac, France
| | - Valérie Taly
- INSERM UMR-S1147, CNRS SNC5014, Paris Descartes University, Equipe labellisée Ligue Nationale contre le cancer, Paris, France
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28
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Holzner G, Stavrakis S, deMello A. Elasto-Inertial Focusing of Mammalian Cells and Bacteria Using Low Molecular, Low Viscosity PEO Solutions. Anal Chem 2017; 89:11653-11663. [DOI: 10.1021/acs.analchem.7b03093] [Citation(s) in RCA: 33] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Affiliation(s)
- Gregor Holzner
- Institute for Chemical and
Bioengineering, Department of Chemistry and Applied Biosciences, ETH Zürich, Vladimir Prelog Weg 1, 8093 Zürich, Switzerland
| | - Stavros Stavrakis
- Institute for Chemical and
Bioengineering, Department of Chemistry and Applied Biosciences, ETH Zürich, Vladimir Prelog Weg 1, 8093 Zürich, Switzerland
| | - Andrew deMello
- Institute for Chemical and
Bioengineering, Department of Chemistry and Applied Biosciences, ETH Zürich, Vladimir Prelog Weg 1, 8093 Zürich, Switzerland
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Sesen M, Alan T, Neild A. Droplet control technologies for microfluidic high throughput screening (μHTS). LAB ON A CHIP 2017. [PMID: 28631799 DOI: 10.1039/c7lc00005g] [Citation(s) in RCA: 53] [Impact Index Per Article: 7.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/05/2023]
Abstract
The transition from micro well plate and robotics based high throughput screening (HTS) to chip based screening has already started. This transition promises reduced droplet volumes thereby decreasing the amount of fluids used in these studies. Moreover, it significantly boosts throughput allowing screening to keep pace with the overwhelming number of molecular targets being discovered. In this review, we analyse state-of-the-art droplet control technologies that exhibit potential to be used in this new generation of screening devices. Since these systems are enclosed and usually planar, even some of the straightforward methods used in traditional HTS such as pipetting and reading can prove challenging to replicate in microfluidic high throughput screening (μHTS). We critically review the technologies developed for this purpose in depth, describing the underlying physics and discussing the future outlooks.
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Affiliation(s)
- Muhsincan Sesen
- Department of Mechanical and Aerospace Engineering, Monash University, Clayton, VIC 3800, Australia.
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30
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Fernandes SC, Walz JA, Wilson DJ, Brooks JC, Mace CR. Beyond Wicking: Expanding the Role of Patterned Paper as the Foundation for an Analytical Platform. Anal Chem 2017; 89:5654-5664. [PMID: 28406607 DOI: 10.1021/acs.analchem.6b03860] [Citation(s) in RCA: 50] [Impact Index Per Article: 7.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]
Abstract
While a number of assays for soluble analytes have been developed using paper-based microfluidic devices, the detection and analysis of blood cells has remained an outstanding challenge. In this Feature, we discuss how the properties of paper determine the performance of paper-based microfluidic devices and permit the design of cellular assays, which can ultimately impact disparities in healthcare that exist in limited-resource settings.
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Affiliation(s)
- Syrena C Fernandes
- Department of Chemistry, Tufts University , 62 Talbot Avenue, Medford, Massachusetts 02155, United States
| | - Jenna A Walz
- Department of Chemistry, Tufts University , 62 Talbot Avenue, Medford, Massachusetts 02155, United States
| | - Daniel J Wilson
- Department of Chemistry, Tufts University , 62 Talbot Avenue, Medford, Massachusetts 02155, United States
| | - Jessica C Brooks
- Department of Chemistry, Tufts University , 62 Talbot Avenue, Medford, Massachusetts 02155, United States
| | - Charles R Mace
- Department of Chemistry, Tufts University , 62 Talbot Avenue, Medford, Massachusetts 02155, United States
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31
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Fiedler BL, Van Buskirk S, Carter KP, Qin Y, Carpenter MC, Palmer AE, Jimenez R. Droplet Microfluidic Flow Cytometer For Sorting On Transient Cellular Responses Of Genetically-Encoded Sensors. Anal Chem 2017; 89:711-719. [PMID: 27959493 PMCID: PMC6019271 DOI: 10.1021/acs.analchem.6b03235] [Citation(s) in RCA: 32] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
Fluorescent biosensors are important measurement tools for in vivo quantification of pH, concentrations of metal ions and other analytes, and physical parameters such as membrane potential. Both the development of these sensors and their implementation in examining cellular heterogeneity requires technology for measuring and sorting cells based on the fluorescence levels before and after chemical or physical perturbations. We developed a droplet microfluidic platform for the screening and separation of cell populations on the basis of the in vivo response of expressed fluorescence-based biosensors after addition of an exogenous analyte. We demonstrate the capability to resolve the responses of two genetically encoded Zn2+ sensors at a range of time points spanning several seconds and subsequently sort a mixed-cell population of varying ratios with high accuracy.
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Affiliation(s)
- Brett L. Fiedler
- JILA, University of Colorado and NIST, Boulder CO 80309
- Department of Chemistry and Biochemistry, University of Colorado, Boulder CO 80309
| | | | - Kyle P. Carter
- Department of Chemistry and Biochemistry, University of Colorado, Boulder CO 80309
- BioFrontiers Institute, University of Colorado, Boulder CO 80303
| | - Yan Qin
- Department of Chemistry and Biochemistry, University of Colorado, Boulder CO 80309
- Department of Biological Sciences, University of Denver, Denver, CO 80208
| | - Margaret C. Carpenter
- Department of Chemistry and Biochemistry, University of Colorado, Boulder CO 80309
- BioFrontiers Institute, University of Colorado, Boulder CO 80303
| | - Amy E. Palmer
- Department of Chemistry and Biochemistry, University of Colorado, Boulder CO 80309
- BioFrontiers Institute, University of Colorado, Boulder CO 80303
| | - Ralph Jimenez
- JILA, University of Colorado and NIST, Boulder CO 80309
- Department of Chemistry and Biochemistry, University of Colorado, Boulder CO 80309
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32
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33
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Affiliation(s)
- Bethany Gross
- Department of Chemistry, Michigan State University, East
Lansing, Michigan 48824, United States
| | - Sarah Y. Lockwood
- Department of Chemistry, Michigan State University, East
Lansing, Michigan 48824, United States
| | - Dana M. Spence
- Department of Chemistry, Michigan State University, East
Lansing, Michigan 48824, United States
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34
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Lychagov VV, Shemetov AA, Jimenez R, Verkhusha VV. Microfluidic System for In-Flow Reversible Photoswitching of Near-Infrared Fluorescent Proteins. Anal Chem 2016; 88:11821-11829. [PMID: 27807973 DOI: 10.1021/acs.analchem.6b03499] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
Abstract
We have developed a microfluidic flow cytometry system to screen reversibly photoswitchable fluorescent proteins for contrast and stability of reversible photoconversion between high- and low-fluorescent states. A two-color array of 20 excitation and deactivation beams generated with diffractive optics was combined with a serpentine microfluidic channel geometry designed to provide five cycles of photoswitching with real-time calculation of photoconversion fluorescence contrast. The characteristics of photoswitching in-flow as a function of excitation and deactivation beam fluence, flow speed, and protein concentration were studied with droplets of the bacterial phytochrome from Deinococcus radiodurans (DrBphP), which is weakly fluorescent in the near-infrared (NIR) spectral range. In agreement with measurements on stationary droplets and HeLa S3 mammalian cells expressing DrBphP, optimized operation of the flow system provided up to 50% photoconversion contrast in-flow at a droplet rate of few hertz and a coefficient of variation (CV) of up to 2% over 10 000 events. The methods for calibrating the brightness and photoswitching measurements in microfluidic flow established here provide a basis for screening of cell-based libraries of reversibly switchable NIR fluorescent proteins.
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Affiliation(s)
| | | | | | - Vladislav V Verkhusha
- Department of Biochemistry and Developmental Biology, Faculty of Medicine, University of Helsinki , Helsinki 00029, Finland
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35
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Jeong SH, Zhang S, Hjort K, Hilborn J, Wu Z. PDMS-Based Elastomer Tuned Soft, Stretchable, and Sticky for Epidermal Electronics. ADVANCED MATERIALS (DEERFIELD BEACH, FLA.) 2016; 28:5830-6. [PMID: 27167137 DOI: 10.1002/adma.201505372] [Citation(s) in RCA: 123] [Impact Index Per Article: 15.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/01/2015] [Revised: 04/17/2016] [Indexed: 05/20/2023]
Abstract
A highly soft, stretchable, and sticky polydimethylsiloxane-based elastomer is achieved by adding small fractions of an amine-based polymer. The modified elastomer is tuned with a simple mixing step and shows good processability for microstructure fabrication. The modified elastomer shows excellent compatibility with an epidermal strain sensor on human skin.
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Affiliation(s)
- Seung Hee Jeong
- Microsystems Technology, Department of Engineering Sciences, Uppsala University, The Ångström Laboratory, Uppsala, 75121, Sweden
| | - Shuo Zhang
- State Key Laboratory of Digital Manufacturing Equipment and Technology, Huazhong University of Science and Technology, Wuhan, 430074, P. R. China
| | - Klas Hjort
- Microsystems Technology, Department of Engineering Sciences, Uppsala University, The Ångström Laboratory, Uppsala, 75121, Sweden
| | - Jöns Hilborn
- Polymer Chemistry, A Science for Life Laboratory, Department of Chemistry-Ångström, Uppsala University, Uppsala, 75121, Sweden
| | - Zhigang Wu
- Microsystems Technology, Department of Engineering Sciences, Uppsala University, The Ångström Laboratory, Uppsala, 75121, Sweden
- State Key Laboratory of Digital Manufacturing Equipment and Technology, Huazhong University of Science and Technology, Wuhan, 430074, P. R. China
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36
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Patabadige DEW, Mickleburgh T, Ferris L, Brummer G, Culbertson AH, Culbertson CT. High‐throughput microfluidic device for single cell analysis using multiple integrated soft lithographic pumps. Electrophoresis 2016; 37:1337-44. [DOI: 10.1002/elps.201500557] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/08/2015] [Revised: 02/08/2016] [Accepted: 02/09/2016] [Indexed: 01/07/2023]
Affiliation(s)
| | - Tom Mickleburgh
- Department of Chemistry Kansas State University Manhattan KS USA
| | - Lorin Ferris
- Department of Chemistry Kansas State University Manhattan KS USA
| | - Gage Brummer
- Department of Chemistry Kansas State University Manhattan KS USA
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37
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Microstructure-Enhanced Liquid⁻Liquid Extraction in a Real-Time Fluorescence Detection Microfluidic Chip. MICROMACHINES 2016; 7:mi7030046. [PMID: 30407418 PMCID: PMC6190443 DOI: 10.3390/mi7030046] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/25/2016] [Revised: 02/27/2016] [Accepted: 03/08/2016] [Indexed: 01/14/2023]
Abstract
Microfluidic system is widely employed in the detection of environmental contaminants and biological specimens. One of the critical issues which limits the applications of microfluidic chips is the limit of detection of trace specimens. Liquid–liquid extraction is of great importance in the preprocessing in microfluidic devices. In this paper, we developed a real-time fluorescence detection microfluidic chip combined with a microstructure-enhanced liquid–liquid laminar extraction technique, which concentrated the trace compound and realized real-time monitoring. Auxiliary microstructures integrated in the microfluidic chip were applied to increase the extraction efficiency, which was proved by the FEM (finite element method) simulation as well. A common fluorescence probe, Rhodamine 6G (Rh6g), was used in the experiment to demonstrate the performance of the microfluidic system. It revealed that the liquid–liquid laminar extraction combined with auxiliary microstructures of a cross shape was an effective method for enrichment. The efficiency of microstructure-enhanced liquid–liquid extraction was increased by 350% compared to the traditional laminar flow extraction.
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38
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Nawaz AA, Chen Y, Nama N, Nissly RH, Ren L, Ozcelik A, Wang L, McCoy JP, Levine SJ, Huang TJ. Acoustofluidic Fluorescence Activated Cell Sorter. Anal Chem 2015; 87:12051-8. [PMID: 26331909 PMCID: PMC4888785 DOI: 10.1021/acs.analchem.5b02398] [Citation(s) in RCA: 58] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
Selective isolation of cell subpopulations with defined biological characteristics is crucial for many biological studies and clinical applications. In this work, we present the development of an acoustofluidic fluorescence activated cell sorting (FACS) device that simultaneously performs on-demand, high-throughput, high-resolution cell detection and sorting, integrated onto a single chip. Our acoustofluidic FACS device uses the "microfluidic drifting" technique to precisely focus cells/particles three dimensionally and achieves a flow of single-file particles/cells as they pass through a laser interrogation region. We then utilize short bursts (150 μs) of standing surface acoustic waves (SSAW) triggered by an electronic feedback system to sort fluorescently labeled particles/cells with desired biological properties. We have demonstrated continuous isolation of fluorescently labeled HeLa cells from unlabeled cells at a throughput of ∼1200 events/s with a purity reaching 92.3 ± 3.39%. Furthermore, 99.18% postsort cell viability indicates that our acoustofluidic sorting technique maintains a high integrity of cells. Therefore, our integrated acoustofluidic FACS device is demonstrated to achieve two-way cell sorting with high purity, biocompatibility, and biosafety. We believe that our device has significant potential for use as a low-cost, high-performance, portable, and user-friendly FACS instrument.
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Affiliation(s)
- Ahmad Ahsan Nawaz
- Department of Engineering Science and Mechanics, The Pennsylvania State University, University Park, Pennsylvania 16802, United States
- School of Mechanical and Manufacturing Engineering (SMME), National University of Sciences and Technology (NUST), Islamabad H-12, Pakistan
| | - Yuchao Chen
- Department of Engineering Science and Mechanics, The Pennsylvania State University, University Park, Pennsylvania 16802, United States
| | - Nitesh Nama
- Department of Engineering Science and Mechanics, The Pennsylvania State University, University Park, Pennsylvania 16802, United States
| | - Ruth Helmus Nissly
- Microscopy and Cytometry Facility, The Huck Institutes of the Life Sciences, The Pennsylvania State University, University Park, Pennsylvania 16802, United States
| | - Liqiang Ren
- Department of Engineering Science and Mechanics, The Pennsylvania State University, University Park, Pennsylvania 16802, United States
| | - Adem Ozcelik
- Department of Engineering Science and Mechanics, The Pennsylvania State University, University Park, Pennsylvania 16802, United States
| | - Lin Wang
- Ascent Bio-Nano Technologies Inc., State College, Pennsylvania 16801, United States
| | - J. Philip McCoy
- National Heart, Lung, and Blood Institute (NHLBI), NIH, Bethesda, Maryland, United States
| | - Stewart J. Levine
- National Heart, Lung, and Blood Institute (NHLBI), NIH, Bethesda, Maryland, United States
| | - Tony Jun Huang
- Department of Engineering Science and Mechanics, The Pennsylvania State University, University Park, Pennsylvania 16802, United States
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39
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Ren L, Chen Y, Li P, Mao Z, Huang PH, Rufo J, Guo F, Wang L, McCoy JP, Levine SJ, Huang TJ. A high-throughput acoustic cell sorter. LAB ON A CHIP 2015; 15:3870-3879. [PMID: 26289231 PMCID: PMC4641751 DOI: 10.1039/c5lc00706b] [Citation(s) in RCA: 90] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/04/2023]
Abstract
Acoustic-based fluorescence activated cell sorters (FACS) have drawn increased attention in recent years due to their versatility, high biocompatibility, high controllability, and simple design. However, the sorting throughput for existing acoustic cell sorters is far from optimum for practical applications. Here we report a high-throughput cell sorting method based on standing surface acoustic waves (SSAWs). We utilized a pair of focused interdigital transducers (FIDTs) to generate SSAW with high resolution and high energy efficiency. As a result, the sorting throughput is improved significantly from conventional acoustic-based cell sorting methods. We demonstrated the successful sorting of 10 μm polystyrene particles with a minimum actuation time of 72 μs, which translates to a potential sorting rate of more than 13,800 events per second. Without using a cell-detection unit, we were able to demonstrate an actual sorting throughput of 3300 events per second. Our sorting method can be conveniently integrated with upstream detection units, and it represents an important development towards a functional acoustic-based FACS system.
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Affiliation(s)
- Liqiang Ren
- Department of Engineering Science and Mechanics, The Pennsylvania State University, University Park, PA 16802, USA
| | - Yuchao Chen
- Department of Engineering Science and Mechanics, The Pennsylvania State University, University Park, PA 16802, USA
| | - Peng Li
- Department of Engineering Science and Mechanics, The Pennsylvania State University, University Park, PA 16802, USA
| | - Zhangming Mao
- Department of Engineering Science and Mechanics, The Pennsylvania State University, University Park, PA 16802, USA
| | - Po-Hsun Huang
- Department of Engineering Science and Mechanics, The Pennsylvania State University, University Park, PA 16802, USA
| | - Joseph Rufo
- Department of Engineering Science and Mechanics, The Pennsylvania State University, University Park, PA 16802, USA
| | - Feng Guo
- Department of Engineering Science and Mechanics, The Pennsylvania State University, University Park, PA 16802, USA
| | - Lin Wang
- Ascent Bio-Nano Technologies, Inc., State College, PA, 16802, USA
| | - J. Philip McCoy
- National Heart, Lung, and Blood Institute (NHLBI), NIH, Bethesda, MD, USA
| | - Stewart J. Levine
- National Heart, Lung, and Blood Institute (NHLBI), NIH, Bethesda, MD, USA
| | - Tony Jun Huang
- Department of Engineering Science and Mechanics, The Pennsylvania State University, University Park, PA 16802, USA
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Dittrich P, Ibáñez AJ. Analysis of metabolites in single cells-what is the best micro-platform? Electrophoresis 2015; 36:2196-2206. [PMID: 25929796 DOI: 10.1002/elps.201500045] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/29/2015] [Revised: 04/04/2015] [Accepted: 04/04/2015] [Indexed: 11/11/2022]
Abstract
This review covers new innovations and developments in the field of single-cell level analysis of metabolites, involving the role of microfluidic and microarray platforms to manipulate and handle the cells prior their detection. Microfluidic and microarray platforms have shown great promise. The latest developments demonstrate their potential to identify a particular cell or even an ensemble of cells (sharing a common property or phenotype) that co-exist in a much larger cell population. The reason for this is the capability of these platforms to perform several complex analytical processes, such as: cleanup, sorting, derivatization, separation, and detection, with great robustness, speed, and reduced sample/reagent consumption. Here, we present several examples that illustrate the rapid strides that have been made for the routine analysis of metabolites by coupling different microfluidics and microarrays devices to a wide range of analytical detectors (e.g. fluorescent microscopy, electrochemical, and mass spectrometry). Herein, we also present selected examples detailing the use of microfluidics and microarrays in the visualization of the natural occurring cell-to-cell heterogeneity in isogenic populations, in particular during the response to external cues. The possibility to accurate monitor the cell-to-cell heterogeneity based on different levels of key metabolites is of clinical relevance, since cell-to-cell heterogeneity can influence, for example, the outcome of a drug treatment.
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Affiliation(s)
- Petra Dittrich
- ETH Zurich - Chemie und Angewandte Biowissenschaften, Wolfgang-Pauli-Str. 10, Zurich, 8093, Switzerland
| | - Alfredo J Ibáñez
- ETH Zurich - Department of Chemistry and Applied Biosciences, Vladimir-Prelog-weg 3, Zurich, 8093, Switzerland
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42
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Shields CW, Reyes CD, López GP. Microfluidic cell sorting: a review of the advances in the separation of cells from debulking to rare cell isolation. LAB ON A CHIP 2015; 15:1230-49. [PMID: 25598308 PMCID: PMC4331226 DOI: 10.1039/c4lc01246a] [Citation(s) in RCA: 548] [Impact Index Per Article: 60.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/16/2023]
Abstract
Accurate and high throughput cell sorting is a critical enabling technology in molecular and cellular biology, biotechnology, and medicine. While conventional methods can provide high efficiency sorting in short timescales, advances in microfluidics have enabled the realization of miniaturized devices offering similar capabilities that exploit a variety of physical principles. We classify these technologies as either active or passive. Active systems generally use external fields (e.g., acoustic, electric, magnetic, and optical) to impose forces to displace cells for sorting, whereas passive systems use inertial forces, filters, and adhesion mechanisms to purify cell populations. Cell sorting on microchips provides numerous advantages over conventional methods by reducing the size of necessary equipment, eliminating potentially biohazardous aerosols, and simplifying the complex protocols commonly associated with cell sorting. Additionally, microchip devices are well suited for parallelization, enabling complete lab-on-a-chip devices for cellular isolation, analysis, and experimental processing. In this review, we examine the breadth of microfluidic cell sorting technologies, while focusing on those that offer the greatest potential for translation into clinical and industrial practice and that offer multiple, useful functions. We organize these sorting technologies by the type of cell preparation required (i.e., fluorescent label-based sorting, bead-based sorting, and label-free sorting) as well as by the physical principles underlying each sorting mechanism.
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Affiliation(s)
- C Wyatt Shields
- NSF Research Triangle Materials Research Science and Engineering Center, Duke University, Durham, NC 27708, USA.
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43
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Deformation Analysis of a Pneumatically-Activated Polydimethylsiloxane (PDMS) Membrane and Potential Micro-Pump Applications. MICROMACHINES 2015. [DOI: 10.3390/mi6020216] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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44
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Li Y, Yan L, Liu Y, Qian K, Liu B, Yang P, Liu B. High-efficiency nano/micro-reactors for protein analysis. RSC Adv 2015. [DOI: 10.1039/c4ra12333f] [Citation(s) in RCA: 32] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
This article reviews the recent advances regarding the development of nanomaterial-based nanoreactors and microfluidic droplet reactors and their applications in protein analysis.
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Affiliation(s)
- Yixin Li
- Department of Chemistry and Institutes of Biomedical Sciences
- Fudan University
- Shanghai 200433
- China
| | - Ling Yan
- Department of Chemistry and Institutes of Biomedical Sciences
- Fudan University
- Shanghai 200433
- China
| | - Yun Liu
- Department of Chemistry and Institutes of Biomedical Sciences
- Fudan University
- Shanghai 200433
- China
| | - Kun Qian
- Center for Bio-Nano-Chips and Diagnostics in Translational Medicine
- School of Biomedical Engineering and Med-X Research Institute
- Shanghai Jiao Tong University
- Shanghai
- China
| | - Bin Liu
- Center for Bio-Nano-Chips and Diagnostics in Translational Medicine
- School of Biomedical Engineering and Med-X Research Institute
- Shanghai Jiao Tong University
- Shanghai
- China
| | - Pengyuan Yang
- Department of Chemistry and Institutes of Biomedical Sciences
- Fudan University
- Shanghai 200433
- China
| | - Baohong Liu
- Department of Chemistry and Institutes of Biomedical Sciences
- Fudan University
- Shanghai 200433
- China
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45
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Song Y, Li M, Pan X, Wang Q, Li D. Size-based cell sorting with a resistive pulse sensor and an electromagnetic pump in a microfluidic chip. Electrophoresis 2014; 36:398-404. [DOI: 10.1002/elps.201400292] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/15/2014] [Revised: 08/03/2014] [Accepted: 08/11/2014] [Indexed: 12/24/2022]
Affiliation(s)
- Yongxin Song
- Department of Marine Engineering; Dalian Maritime University; Dalian P. R. China
| | - Mengqi Li
- Department of Marine Engineering; Dalian Maritime University; Dalian P. R. China
| | - Xinxiang Pan
- Department of Marine Engineering; Dalian Maritime University; Dalian P. R. China
| | - Qi Wang
- Department of Respiratory Medicine; The second affiliated hospital of Dalian Medical University; Dalian P. R. China
| | - Dongqing Li
- Department of Mechanical and Mechatronics Engineering; University of Waterloo; Waterloo Ontario Canada
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46
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Dielectrophoresis for bioparticle manipulation. Int J Mol Sci 2014; 15:18281-309. [PMID: 25310652 PMCID: PMC4227216 DOI: 10.3390/ijms151018281] [Citation(s) in RCA: 93] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/24/2014] [Revised: 09/18/2014] [Accepted: 09/24/2014] [Indexed: 12/31/2022] Open
Abstract
As an ideal method to manipulate biological particles, the dielectrophoresis (DEP) technique has been widely used in clinical diagnosis, disease treatment, drug development, immunoassays, cell sorting, etc. This review summarizes the research in the field of bioparticle manipulation based on DEP techniques. Firstly, the basic principle of DEP and its classical theories are introduced in brief; Secondly, a detailed introduction on the DEP technique used for bioparticle manipulation is presented, in which the applications are classified into five fields: capturing bioparticles to specific regions, focusing bioparticles in the sample, characterizing biomolecular interaction and detecting microorganism, pairing cells for electrofusion and separating different kinds of bioparticles; Thirdly, the effect of DEP on bioparticle viability is analyzed; Finally, the DEP techniques are summarized and future trends in bioparticle manipulation are suggested.
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47
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Lab-on-chip cytometry based on magnetoresistive sensors for bacteria detection in milk. SENSORS 2014; 14:15496-524. [PMID: 25196163 PMCID: PMC4179045 DOI: 10.3390/s140815496] [Citation(s) in RCA: 50] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/23/2014] [Revised: 07/14/2014] [Accepted: 08/01/2014] [Indexed: 12/11/2022]
Abstract
Flow cytometers have been optimized for use in portable platforms, where cell separation, identification and counting can be achieved in a compact and modular format. This feature can be combined with magnetic detection, where magnetoresistive sensors can be integrated within microfluidic channels to detect magnetically labelled cells. This work describes a platform for in-flow detection of magnetically labelled cells with a magneto-resistive based cell cytometer. In particular, we present an example for the validation of the platform as a magnetic counter that identifies and quantifies Streptococcus agalactiae in milk.
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48
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Yamaguchi N, Roberts M, Castro S, Oubre C, Makimura K, Leys N, Grohmann E, Sugita T, Ichijo T, Nasu M. Microbial monitoring of crewed habitats in space-current status and future perspectives. Microbes Environ 2014; 29:250-60. [PMID: 25130885 PMCID: PMC4159036 DOI: 10.1264/jsme2.me14031] [Citation(s) in RCA: 58] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022] Open
Abstract
Previous space research conducted during short-term flight experiments and long-term environmental monitoring on board orbiting space stations suggests that the relationship between humans and microbes is altered in the crewed habitat in space. Both human physiology and microbial communities adapt to spaceflight. Microbial monitoring is critical to crew safety in long-duration space habitation and the sustained operation of life support systems on space transit vehicles, space stations, and surface habitats. To address this critical need, space agencies including NASA (National Aeronautics and Space Administration), ESA (European Space Agency), and JAXA (Japan Aerospace Exploration Agency) are working together to develop and implement specific measures to monitor, control, and counteract biological contamination in closed-environment systems. In this review, the current status of microbial monitoring conducted in the International Space Station (ISS) as well as the results of recent microbial spaceflight experiments have been summarized and future perspectives are discussed.
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Affiliation(s)
- Nobuyasu Yamaguchi
- Environmental Science and Microbiology, Graduate School of Pharmaceutical Sciences, Osaka University
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49
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Chen GH, Huang CT, Wu HH, Zamay TN, Zamay AS, Jen CP. Isolating and concentrating rare cancerous cells in large sample volumes of blood by using dielectrophoresis and stepping electric fields. BIOCHIP JOURNAL 2014. [DOI: 10.1007/s13206-014-8201-4] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
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50
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Chen Y, Chung AJ, Wu TH, Teitell MA, Di Carlo D, Chiou PY. Pulsed laser activated cell sorting with three dimensional sheathless inertial focusing. SMALL (WEINHEIM AN DER BERGSTRASSE, GERMANY) 2014; 10:1746-51. [PMID: 24536017 PMCID: PMC4324602 DOI: 10.1002/smll.201302885] [Citation(s) in RCA: 50] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/05/2013] [Revised: 12/08/2013] [Indexed: 05/20/2023]
Affiliation(s)
- Yue Chen
- Department of Mechanical and Aerospace Engineering, University of California at Los Angeles (UCLA), 43–147 Eng. IV, 420 Westwood Plaza, Los Angeles, CA 90095–1597, USA
| | - Aram J. Chung
- Department of Mechanical, Aerospace and Nuclear Engineering, JEC 2024, Rensselaer Polytechnic Institute, 110 8th Street, Troy, NY 12180–3590, USA
| | - Ting-Hsiang Wu
- Department of Mechanical and Aerospace Engineering, University of California at Los Angeles (UCLA), 43–147 Eng. IV, 420 Westwood Plaza, Los Angeles, CA 90095–1597, USA. Department of Pathology and Laboratory Medicine, University of California at Los Angeles (UCLA), Los Angeles, CA 90095–1732, USA
| | - Michael A. Teitell
- Departments of Pathology and Laboratory Medicine, Pediatrics, and Bioengineering; Jonsson Comprehensive Cancer Center, Broad Stem Cell Research Center, Molecular Biology Institute; and California NanoSystems Institute, University of California at Los Angeles (UCLA), Los Angeles, CA 90095–1732, USA
| | - Dino Di Carlo
- Department of Bioengineering and California NanoSystems Institute, University of California at Los Angeles (UCLA), Los Angeles, CA 90095, USA
| | - Pei-Yu Chiou
- Department of Mechanical and Aerospace Engineering, University of California at Los Angeles (UCLA), 43–147 Eng. IV, 420 Westwood Plaza, Los Angeles, CA 90095–1597, USA. Department of Bioengineering and California NanoSystems Institute, University of California at Los Angeles (UCLA), Los Angeles, CA 90095, USA
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