Cytoplasmic pH-Stat during Phenanthrene Uptake by Wheat Roots: A Mechanistic Consideration

Indole-3-acetic acid enhances the co-transport of proton and phenanthrene mediated by TaSAUR80-5A in wheat roots

Polycyclic aromatic hydrocarbons (PAHs) are a type of organic pollution that can accumulate in crops and hazard human health. This study used phenanthrene (PHE) as a model PAH and employed hydroponic experiments to illustrate the role of indole-3-acetic acid (IAA) in the regulation of PHE accumulation in wheat roots. At optimal concentrations, wheat roots treated with PHE + IAA showed a 46.9% increase in PHE concentration, whereas treatment with PHE + P-chlorophenoxyisobutyric acid resulted in a 38.77% reduction. Transcriptome analysis identified TaSAUR80-5A as the crucial gene for IAA-enhancing PHE uptake. IAA increases plasma membrane H+-ATPase activity, promoting active transport of PHE via the PHE/H+ cotransport mechanism. These results provide not only the theoretical basis necessary to better understand the function of IAA in PAHs uptake and transport by staple crops, but also a strategy for controlling PAHs accumulation in staple crops and enhancing phytoremediation of PAH-contaminated environments.

Mechanistic insights into auxin-enhancing polycyclic aromatic hydrocarbon uptake by wheat roots: Evidence from in situ intracellular pH and root-surface H+ flux

Polycyclic aromatic hydrocarbons (PAHs) are a group of extremely carcinogenic organic pollutants. Our previous findings have demonstrated that plant roots actively take up PAHs through co-transport with H+ ions. Auxin serves as a pivotal regulator of plant growth and development. However, it remains unclear whether the hormone can enhance the uptake of PAHs by plant roots. Hence, the wheat root exposed to PAHs with/without auxins was set to investigate how the auxin promotes the PAHs uptake by roots. In our study, auxin could significantly enhance the uptake of PAHs after 4 h of exposure. After the addition of auxin, the root tissue cytoplasmic pH value was decreased and the H+ influx was observed, indicating that the extracellular space was alkalinized in a short time. The increased H+ influx rate enhanced the uptake of PAHs. In addition, the H+-ATPase activity was also increased, suggesting that auxin activated two distinct and antagonistic H+ flux pathways, and the H+ influx pathway was dominant. Our findings offer important information for exploring the mechanism underlying auxin regulation of PAHs uptake and the phytoremediation of PAH-contaminated soil and water.

Role of phosphorus on the biogeochemical behavior of cadmium in the contaminated soil under leaching and pot experiments

Phosphorus (P) is involved in various biochemical reactions in plant growth, so it is beneficial to plants growing in soils contaminated by metals, including cadmium (Cd). However, few studies have reported on the mechanistic roles of P in mitigating Cd toxicity to ryegrass root, and especially in alleviating the disruption of the mitochondrial function of living cells. In this study, the physiological and biochemical mechanisms associated with ryegrass growth under various Cd and P treatments were investigated using leaching and pot systems. The concentration of Cd in soil leachates showed a significantly positive relationship with redox potential (P < 0.05), but negative relationship (P < 0.05) with leachate pH values and dissolved organic carbon (DOC), indicating that exogenous P addition (as H2PO4-) may decrease Cd leaching from contaminated soil. Compared to the control (without P addition), the cumulative Cd content was reduced by 53.3% and 64.5% in the soil leachate with exogenous P application (20 mg/L and 80 mg/L), respectively. Notably, application of P decreased the Cd concentrations in the symplastic fractions and increased the Cd concentrations in the apoplastic fractions in root tips, which may help to alleviate Cd stress to the protoplast. Moreover, exogenous P was found to play a positive role in mitochondrial function and Ca2+ variation in root cells under Cd stress, which provides novel insights into the mechanisms of exogenous P in alleviating plant Cd injury.

Exogenous auxin alters the polycyclic aromatic hydrocarbons apoplastic and symplastic uptake by wheat seedling roots

Polycyclic aromatic hydrocarbons (PAHs) are a category of organic pollutants known for their high carcinogenicity. Our previous research has illustrated that plant roots actively absorb PAHs through a co-transport mechanism with H+ ions. Because auxin can increase the H+-ATPase activity, the wheat roots were exposed to PAHs with/without auxins to study whether auxins facilitate the uptake of PAHs by plant roots and to gain insights into the underlying mechanisms of this process. In our study, indole acetic acid (100 μM) and α-naphthaleneacetic acid (10 μM) significantly increased the PAHs concentrations in apoplast and symplast, and the treating time and concentrations were positively correlated with PAHs accumulations. The time-dependent kinetics for 36 h followed the Elovich equation, and the concentration-dependent kinetics of apoplastic and symplastic uptake for 4 h could be described with the Freundlich and Michaelis-Menten equations, respectively. The proportion of PAHs accumulated in apoplast could be enhanced by auxins in most treatments. Our findings offer novel insights into the mechanisms of PAH uptake by plant roots under auxin exposure. Additionally, this research aids in refining strategies for ensuring crop safety and improving phytoremediation of PAH-contaminated soil and water.

Transfer and Degradation of PAHs in the Soil-Plant System: A Review

Polycyclic aromatic hydrocarbons (PAHs) are highly toxic, persistent organic pollutants that threaten ecosystems and human health. Consistent monitoring is essential to minimize the entry of PAHs into plants and reduce food chain contamination. PAHs infiltrate plants through multiple pathways, causing detrimental effects and triggering diverse plant responses, ultimately increasing either toxicity or tolerance. Primary plant detoxification processes include enzymatic transformation, conjugation, and accumulation of contaminants in cell walls/vacuoles. Plants also play a crucial role in stimulating microbial PAHs degradation by producing root exudates, enhancing bioavailability, supplying nutrients, and promoting soil microbial diversity and activity. Thus, synergistic plant-microbe interactions efficiently decrease PAHs uptake by plants and, thereby, their accumulation along the food chain. This review highlights PAHs uptake pathways and their overall fate as contaminants of emerging concern (CEC). Understanding plant uptake mechanisms, responses to contaminants, and interactions with rhizosphere microbiota is vital for addressing PAH pollution in soil and ensuring food safety and quality.

Expeditious profiling of polycyclic aromatic hydrocarbons transport and obstruction mechanisms in crop xylem sap proteins via proteomics and molecular docking

Polycyclic aromatic hydrocarbons (PAHs) pose significant environmental risks due to their toxicity and carcinogenic properties. This research seeks to pinpoint protein targets in crop xylem sap related to PAH contamination and delve into their protein-ligand interactions using computational tools. Proteomic assessment revealed differentially expressed proteins (DEPs), which were subjected to virtual high-throughput screening. Notably, the phenanthrene's influence on xylem sap proteins in maize and wheat was more pronounced than in soybean, with DEPs expression peak at 24 h post-treatment. Maize DEPs were predominantly associated with lipid biosynthesis. Phenanthrene impacted cell membrane hydrophobicity, limiting PAH adsorption and decreasing its concentration in maize xylem sap. Wheat DEPs exhibited an increase in ABC transporters after 24 h of phenanthrene exposure. ABC transporters interacted with stress-responsive proteins like C6TIY1-Co-chaperone p23 and others that either facilitate or inhibit PAH transport, including Indeno[1,2,3-cd]Pyrene and C6TIY1-Co-chaperone protein p23. Both maize and wheat created high-affinity complexes between specific proteins and PAHs, influencing their transport. This study provides insights into the mechanisms of PAH regulation and movement within plant xylem.

Phenanthrene uptake and translocation by Panicum miliaceum L. tissues: an experimental study in an artificial environment

Polycyclic aromatic hydrocarbons (PAHs), as priority organic pollutants, are capable of accumulation in plants. Phenanthrene (Phe) is one of the most abundant low-molecular-weight PAH in the environment which is commonly used as a model PAH in many phytoremediation studies and as a representative compound for all PAHs group. This paper highlights the uptake, translocation, and accumulation of Phe by growing proso millet (Panicum miliaceum L.) in a pot experiment, subjected to 500, 1000, 1500, and 2000 ppm of Phe treatment after 15 and 30 days. Phe naturally existed in P. miliaceum and its concentration showed a time-dependent reduction in treated plant tissues as well as in perlites. Phe concentration in shoots was higher than in roots. During the aging process, the uptake of Phe was diminished whereas translocation factor (TF) demonstrated an overall increasing trend among treatments. The shoot concentration factor (SCF) values were higher than those of root concentration factor (RCF) on both days 15 and 30 and the highest values for both parameters were achieved in 500 ppm of Phe. Both RCFs and SCFs generally tended to decrease with the increase of perlite Phe concentrations. These results suggested that Phe tended to transfer to the shoots and be metabolized there. The Phe concentration revealed a significant decline in all levels of treatment on both 15 (84 to 96%) and 30 (76 to 94%) days. Therefore, the presence of P. miliaceum was effective in promoting the phytoremediation of Phe polluted perlites.

Interactions between phenanthrene and polystyrene micro/nano plastics: Implications for rice (Oryza sativa L.) toxicity

Micro/nano plastics (MPs/NPs) are widely distributed and are one of the global pollutants of current concern. Micro/nano plastics can adsorb a variety of persistent organic pollutants, and different particle sizes and surface charges affect the biological effects of MPs/NPs. Therefore, how the compound pollution of MPs/NPs with different particle sizes and organic pollutants produces toxic effects on plants needs to be further studied. We investigated the toxic effects of phenanthrene (Phe) and amino-modified PS (PS-NH2) with two particle sizes (50 nm, 5 μm) on rice. The stress mechanism of PS-NH2 was different between the two particle sizes. Moreover, 50 nm PS-NH2 inhibited stomatal conductance and transpiration rate, reduced photosynthetic rate, significantly enriched GO functions such as "DNA repair" and "DNA double-strand break," and caused severe DNA damage in rice. Notably, 5 μm PS-NH2 affected the gene expression of "photosynthetic lighting" and "photosynthetic antenna protein" in rice, decreased chlorophyll content, and inhibited rice growth. The toxicity of 50 nm PS-NH2 was stronger. In addition, we found that Phe reduced the toxicity of PS-NH2 with different particle sizes, and the relief effect of 50 nm PS-NH2+Phe was more evident. Further, 50 nm PS-NH2+Phe alleviated the toxicity by stimulating the activities of antioxidant enzymes, reducing oxidative damage to chloroplasts, and inhibiting photosynthesis. However, 5 μm PS-NH2+Phe can reduce the stress by reducing the degree of membrane lipid peroxidation, activating metabolic pathways related to the cell wall and cell membrane formation, and plant antitoxin biosynthesis. The results contribute to the understanding of the mechanism of toxicity of MPs/NPs and polycyclic aromatic hydrocarbons (PAHs) to crops.

Role of Gamma-Aminobutyric Acid in Plant Defense Response

Gamma-aminobutyric acid (GABA) is a four-carbon non-protein amino acid that acts as a defense substance and a signaling molecule in various physiological processes, and which helps plants respond to biotic and abiotic stresses. This review focuses on the role of GABA's synthetic and metabolic pathways in regulating primary plant metabolism, redistributing carbon and nitrogen resources, reducing the accumulation of reactive oxygen species, and improving plants' tolerance of oxidative stress. This review also highlights the way in which GABA maintains intracellular pH homeostasis by acting as a buffer and activating H⁺-ATPase. In addition, calcium signals participate in the accumulation process of GABA under stress. Moreover, GABA also transmits calcium signals through receptors to trigger downstream signaling cascades. In conclusion, understanding the role of GABA in this defense response provides a theoretical basis for applying GABA in agriculture and forestry and feasible coping strategies for plants in complex and changeable environments.

Comparative analysis of remediation efficiency and ultrastructural translocalization of polycyclic aromatic hydrocarbons in Medicago sativa, Helianthus annuus, and Tagetes erecta

Polycyclic aromatic hydrocarbons (PAHs) are semi-volatile anthropogenic contaminants that can damage soil fertility and threaten the environment due to their hazardous effects on various ecological parameters. The experimental objective was divided into two parts because PAHs are always present in mixtures. The toxicity of anthracene, phenanthrene, pyrene, and fluoranthene was examined and investigated the potential of three phytoremediator plants species viz Tagetes erecta, Helianthus annuus, and Medicago sativa for remediation and translocation of individual PAH. PAHs were shown to have inhibitory or stimulating effects on growth, antioxidant properties, and impact on the structure of plant cells. The result showed that M. sativa significantly enhances the removal rate of PAHs in the soil. The dissipation rate reached 96.2% in M. sativa planted soil, followed by H. annuus and T. erecta. Among the plant species, M. sativa exhibited the highest root and shoot concentrations (314.37 and 169.55 mg kg-1), while the lowest concentration was 187.56 and 76.60 mg kg-1 in T. erecta. SEM-EDX and fluorescence micrographs confirmed that pyrene altered plant tissue's ultrastructure and cell viability and was found to be the most toxic and resistant. M. sativa was proven to be the most effective plant for the mitigation of PAHs.

Effects of individual and combined polystyrene nanoplastics and phenanthrene on the enzymology, physiology, and transcriptome parameters of rice (Oryza sativa L.)

Owing to their wide distribution, easy production, and resistance to degradation, microplastics (MPs) represent a globally emerging group of pollutants of concern. Furthermore, their decomposition can result in the generation of nanoplastics (NPs), which cause further environmental issues. Currently, the impact of the combination of these plastics with other organic pollutants on crop growth remains poorly investigated. In this study, a hydroponic experiment was conducted for seven days to evaluate the effects of 50 nm, 50 mg/L polystyrene (PS), and 1 mg/L phenanthrene (Phe) on the growth of rice plants. The results revealed that both Phe and PS inhibited growth and improved the antioxidant potential of rice. Relative to Phe alone, exposure to a combination of PS and Phe reduced Phe accumulation in the roots and shoots by 67.73% and 36.84%, respectively, and decreased the pressure on the antioxidant system. Exposure to Phe alone destroyed the photosynthetic system of rice plant leaves, whereas a combination of PS and Phe alleviated this damage. Gene Ontology (GO) analysis of the rice transcriptomes revealed that detoxification genes and phenylalanine metabolism were suppressed under exposure to Phe, which consequently diminished the antioxidant capacity and polysaccharide synthesis in rice plants. Kyoto Encyclopaedia of Genes and Genomes (KEGG) transcriptome analysis revealed that the combined presence of both PS and Phe improved photosynthesis and energy metabolism and alleviated the toxic effects of Phe by altering the carbon fixation pathway and hormone signal transduction in rice plants. The combination of PS and Phe also prevented Phe-associated damage to rice growth. These findings improve our understanding of the effects of MP/NPs and polycyclic aromatic hydrocarbons on crops.

The joint toxicity of polyethylene microplastic and phenanthrene to wheat seedlings

Due to wide distribution, easy production, and difficult degradation, microplastic pollution has become a new environmental problem that has attracted worldwide attention. However, there is little information about the effects of microplastics in soil and their combined pollution with other organic pollutants on crop growth. In this study, we conducted soil culture experiments to evaluate the effects of polyethylene microplastics (PE-MPs) (0.5%, 1%, 2%, 5%, 8% w/w) individual and combined with phenanthrene (100 mg kg^-1) on wheat growth for 15 days. Under PE-MPs alone and combined with phenanthrene exposure, dose-dependent toxicities in biomass, shoot height and root length were observed. Over 1% PE-MPs stimulate wheat root elongation. Compared with single phenanthrene treatment, the co-contamination of PE-MPs and phenanthrene reduces the accumulation of phenanthrene in wheat roots and leaves. In the range of 0-5%, the activity of wheat root antioxidant enzymes increases with increasing PE-MP concentration; but both phenanthrene and high concentrations (8%) of PE-MPs cause damage to the antioxidant system in wheat roots. In the presence or absence of phenanthrene, the photosynthetic pigment concentration of wheat leaves shows a dual concentration effect of low promotion and high inhibition under PE-MPs stress. The single pollution of PE-MPs destroys the photosynthetic system of wheat leaves, while the co-contamination of PE-MPs and phenanthrene exacerbates this destruction. Therefore, the co-contamination of PE-MPs and phenanthrene causes greater damage to wheat growth. Our findings can help to evaluate the individual and comprehensive toxicity of microplastics and polycyclic aromatic hydrocarbons to crops.

Biochemical and Metabolic Plant Responses toward Polycyclic Aromatic Hydrocarbons and Heavy Metals Present in Atmospheric Pollution

Heavy metals (HMs) and polycyclic aromatic hydrocarbons (PAHs) are toxic components of atmospheric particles. These pollutants induce a wide variety of responses in plants, leading to tolerance or toxicity. Their effects on plants depend on many different environmental conditions, not only the type and concentration of contaminant, temperature or soil pH, but also on the physiological or genetic status of the plant. The main detoxification process in plants is the accumulation of the contaminant in vacuoles or cell walls. PAHs are normally transformed by enzymatic plant machinery prior to conjugation and immobilization; heavy metals are frequently chelated by some molecules, with glutathione, phytochelatins and metallothioneins being the main players in heavy metal detoxification. Besides these detoxification mechanisms, the presence of contaminants leads to the production of the reactive oxygen species (ROS) and the dynamic of ROS production and detoxification renders different outcomes in different scenarios, from cellular death to the induction of stress resistances. ROS responses have been extensively studied; the complexity of the ROS response and the subsequent cascade of effects on phytohormones and metabolic changes, which depend on local concentrations in different organelles and on the lifetime of each ROS species, allow the plant to modulate its responses to different environmental clues. Basic knowledge of plant responses toward pollutants is key to improving phytoremediation technologies.

Remediation of soils and sediments polluted with polycyclic aromatic hydrocarbons: To immobilize, mobilize, or degrade?

Polycyclic aromatic hydrocarbons (PAHs) are generated due to incomplete burning of organic substances. Use of fossil fuels is the primary anthropogenic cause of PAHs emission in natural settings. Although several PAH compounds exist in the natural environmental setting, only 16 of these compounds are considered priority pollutants. PAHs imposes several health impacts on humans and other living organisms due to their carcinogenic, mutagenic, or teratogenic properties. The specific characteristics of PAHs, such as their high hydrophobicity and low water solubility, influence their active adsorption onto soils and sediments, affecting their bioavailability and subsequent degradation. Therefore, this review first discusses various sources of PAHs, including source identification techniques, bioavailability, and interactions of PAHs with soils and sediments. Then this review addresses the remediation technologies adopted so far of PAHs in soils and sediments using immobilization techniques (capping, stabilization, dredging, and excavation), mobilization techniques (thermal desorption, washing, electrokinetics, and surfactant assisted), and biological degradation techniques. The pros and cons of each technology are discussed. A detailed systematic compilation of eco-friendly approaches used to degrade PAHs, such as phytoremediation, microbial remediation, and emerging hybrid or integrated technologies are reviewed along with case studies and provided prospects for future research.

Effects of polystyrene microplastics on uptake and toxicity of phenanthrene in soybean

Microplastics (MPs) can influence the availability of contaminants in the soil and have adverse effects on plants. Up to now, the effects of MPs on the uptake of organic pollutants by leguminous plants are still unclear. In this study, we explored the impacts and mechanisms of polystyrene MPs of different sizes on the uptake of phenanthrene (Phe) by soybean seedlings. The results showed that MPs decreased the uptake of Phe in soybean roots and leaves. Micron-size MPs showed a higher inhibition of Phe uptake in roots than nano-size MPs (4.83 mg/kg) at the beginning with concentrations of 1.89 mg/kg, 3.40 mg/kg, and 0.72 mg/kg in groups 1 μm, 10 μm, and 100 μm MPs/Phe, respectively. The combined toxicity of micron-size MPs and Phe to soybean plants was higher than that of nano-size MPs and Phe, and 100 μm MPs and Phe co-contaminant show the highest toxicity to soybean. The activities of antioxidative enzymes and their gene expression showed that micron-size MPs induced higher genotoxic and oxidative damage to soybean roots than nano-size MPs, which decreased the activity of roots, thus leading to the lower uptake of Phe by soybean roots and leaves. This study highlights that the combined exposure to MPs and Phe causes harmful effects on soybean plants and MPs inhibit the uptake of organic pollutants by higher plants.

Proton-coupled cotransporter involves phenanthrene xylem loading in roots

The uptake and translocation of polycyclic aromatic hydrocarbons (PAHs) by staple crops have gained much attention. However, the mechanism on phenanthrene xylem loading across plasma membrane is still unclear. In this study, we investigated the concentration dependence of phenanthrene xylem loading and the relationship between phenanthrene concentration and xylem sap pH. The impacts of metabolic inhibitor, temperature, and dissolved oxygen on phenanthrene concentration in xylem sap were observed as well. The Michaelis-Menten equation fits phenanthrene xylem loading across parenchyma cell membrane well and xylem sap pH decreases with the increase in treated phenanthrene concentration. Metabolic inhibitor, low temperature and low dissolved oxygen can suppress phenanthrene loading into xylem sap. The inhibitory rate of sodium vanadate on xylem sap phenanthrene is between 19.76% and 25.82%. Low temperature reduces phenanthrene concentration in xylem sap by 86.68%. Hypoxia (2 mg L^-1) inhibits phenanthrene loading into xylem by 78.67%. Therefore, it is indicated that H⁺/phenanthrene cotransporter is implicated in phenanthrene loading into xylem. Our work offers a valuable model to understand the mechanism of PAH loading into xylem.

Thermal and Acidic Treatments of Gluten Epitopes Affect Their Recognition by HLA-DQ2 in silico

Celiac disease (CD) is a prevalent disorder with autoimmune features. Dietary exposure of wheat gluten (including gliadins and glutenins) to the small intestine activates the gluten-reactive CD4⁺ T cells and controls the disease development. While the human leukocyte antigen (HLA) is the single most important genetic factor of this polygenic disorder, HLA-DQ2 recognition of gluten is the major biological step among patients with CD. Gluten epitopes are often rich in Pro and share similar primary sequences. Here, we simulated the solution structures changes of a variety of gluten epitopes under different pH and temperatures, to mimic the fermentation and baking/cooking processes. Based on the crystal structure of HLA-DQ2, binding of differently processed gluten epitopes to DQ2 was studied in silico. This study revealed that heating and pH change during the fermentation process impact the solution structure of gluten epitope. However, binding of differently treated gluten epitope peptide (GEP) to HLA-DQ2 mainly depended on its primary amino acid sequence, especially acidic amino acid residues that play a pivotal role in their recognition by HLA-DQ2.

Nitrate supply decreases uptake and accumulation of ciprofloxacin in Brassica parachinensis

How nitrate (NO₃^-) fertilization influences ciprofloxacin (CIP) uptake by crops remains unsolved. Here, two Brassica parachinensis cultivars differing in CIP accumulation were cultivated to investigate the effects of NO₃^- supply on CIP uptake and the underlying mechanism. The results showed that NO₃^- supply effectively reduced CIP toxicity and accumulation in the two cultivars, especially in the low CIP cultivar. Moreover, NO₃^- supply induced different mechanisms of coping with CIP stress in the two cultivars through influencing subcellular distribution of CIP. The uptake of CIP by root was demonstrated to be a carrier-mediated, energy-consuming, and proton motive force-dependent influx process. Consequently, a mechanism of nitrate supply decreasing CIP uptake was proposed that uptake of CIP and NO₃- into root cell would compete for the proton motive force and share a common energy source provided by plasma membrane H⁺-ATPase. Besides, regulating the concentration balances of cytoplasmic NO₃- and proton by inhibiting the activities of NRase and two tonoplast proton pumps (V-ATPase and V-PPase) led to opposite effect on CIP uptake, further supporting this inference. Our results provide a novel insight into CIP uptake by plant roots, and improve the strategy of minimizing CIP accumulation in crops for food safety by fertilization management.

Insights into Uptake, Translocation, and Transformation Mechanisms of Perfluorophosphinates and Perfluorophosphonates in Wheat (Triticum aestivum L.)

As emerging alternatives of legacy perfluoroalkyl substances, perfluorophosphinates (PFPiAs) and perfluorophosphonates (PFPAs) are widely applied in industrial and agricultural fields and are supposed to be large partitioned to soil and highly persistent. It is of particular interest to understand their transfer from roots to shoots and transformation in plants, such as wheat. The results of hydroponic experiments indicated that C6/C6 PFPiA, C8/C8 PFPiA, perfluorooctanophosphonic acid (PFOPA), and perfluorohexaphosphonic acid (PFHxPA) were quickly adsorbed on the epidermis of wheat root (Triticum aestivum L.), which was driven by their hydrophobicity. A small fraction of the accumulated PFPiAs and PFPAs in the wheat root was subjected to absorption via an active process dependent on H⁺-ATPase. PFHxPA, which has the smallest molecular weight and medium hydrophilicity (log K_ow < 4), displayed the strongest absorption efficiency via the water and anion channels and had the highest translocation potential from roots to shoots in wheat. C6/C6 and C8/C8 PFPiAs experienced phase I metabolism in wheat, although at a low rate, to form more persistent PFHxPA and PFOPA, respectively, as well as 1H-perfluorohexane (1H-PFHx) and 1H-perfluorooctane (1H-PFO), which were regulated by cytochrome P450 in wheat root. As a result, exposure to PFPiAs in roots ultimately caused the accumulation of more persistent PFPAs in the above-ground parts of plants, raising concerns on their potential risks on human health.

The relief effects of organic acids on Scirpus triqueter L. under pyrene-lead stress

During phytoremediation of polycyclic aromatic hydrocarbons (PAHs) and heavy metals, the phytoremediation plants are often stressed by pollutants, which would reduce the efficiency of phytoremediation. The addition of organic acids from root exudates could alleviate the stress. In this study, three organic acids (citric acid, succinic acid, glutaric acid) were added to investigate the effects of organic acids on the stress response of Scirpus triqueter L. at two pyrene-lead concentrations. The activities of reactive oxygen species, malondialdehyde, plasma membrane H⁺-ATPase, and vacuolar H⁺-ATPase and PPase activity, as well as the activities of antioxidant enzymes (SOD, POD, and CAT) in Scirpus triqueter L. were determined. The addition of organic acids could effectively reduce the activities of reactive oxygen species, malondialdehyde, plasma membrane H⁺-ATPase, and vacuolar H⁺-ATPase and PPase activities. Under higher pollution, the damage of plant plasma membrane is more serious, but the addition of citric acid can alleviate this situation and even more effective than the relief under low pollution. The effect of citric acid was more significant than that of succinic acid and glutaric acid. These results demonstrated that organic acids could attenuate the stress of pyrene and lead to Scirpus triqueter L.

Phenanthrene-triggered tricarboxylic acid cycle response in wheat leaf

Tricarboxylic acid cycle (TCA cycle) is the most effective energy metabolism pathway in higher plants and animals. However, there is no information about its response in plants under environmental stress, especially under polycyclic aromatic hydrocarbons (PAHs) pollution. Here, this study is the first to discuss the intermediate and related enzyme changes in TCA cycle in plants. We applied high performance liquid chromatography (HPLC) and isobaric tags for relative and absolute quantitation (iTRAQ) proteomics to analyze the intermediate concentration and related protein response in wheat leaf cells, respectively. The concentrations of citrate and malate (0.37 and 0.57 mg kg^-1) in the treatment with 1.0 mg L^-1 phenanthrene were higher than those in the control, and the concentrations of the other five intermediates (i.e., α-ketoglutarate, fumarate, oxaloacetate, pyruvate and succinate) in the treatment were lower than those in the control. Three detected proteins (pyruvate dehydrogenase, dihydrolipoyllysine-residue succinyltransferase and fumarate hydratase) involved in TCA cycle were up-regulated when phenanthrene was accumulated in wheat leaf cells. Meanwhile, real-time PCR results of seven key TCA cycle enzymes genes further confirmed the aforementioned enzyme results. The gene expressions of ketoglutarate dehydrogenase, fumarase and pyruvate dehydrogenase were promoted when phenanthrene was accumulated, while the other four genes were suppressed. In general, pyruvate decrease is the key reason for TCA cycle inactivation under exposure to phenanthrene. Meanwhile, malate concentration increases significantly (P < 0.05), and all the three conversion enzymes turn active. Our results offer helpful information for understanding TCA cycle energy metabolism response to PAH exposure.

Effects of Binary Mixtures and Transpiration on Accumulation of Pharmaceuticals by Spinach

Many pharmaceuticals are present in reclaimed wastewater and effluent-dominated water bodies used to irrigate edible crops. Previous research has shown that plants irrigated with reclaimed wastewater can accumulate pharmaceuticals. However, plant-driven processes that contribute to differences in accumulation among compounds are not well understood. Here, we tested the effects of exposure to mixtures on spinach accumulation and metabolism of four psychoactive pharmaceuticals found in reclaimed wastewater: carbamazepine, fluoxetine, amitriptyline, and lamotrigine. Coexposure of plants to carbamazepine and fluoxetine or amitriptyline decreased accumulation of the toxic carbamazepine metabolite 10,11-epoxycarbamazepine. Furthermore, we tested a simple transpiration-based accumulation model and found that transpiration is a strong predictor for accumulation of the studied compounds. Amitriptyline accumulated to a larger extent than predicted from transpiration alone, and we suggest the possibility that a transporter protein may be involved in its uptake. Our findings highlight the need to consider plant physiology and mixture effects in studying accumulation of polar and ionizable organic contaminants and their metabolites.

Accumulation and distribution of PAHs in winter wheat from areas influenced by coal combustion in China

In order to investigate level and potential sources of polycyclic aromatic hydrocarbons (PAHs) in wheat fields affected by coal combustion in Henan and Shaanxi Provinces and to investigate distribution and transfer of PAHs in winter wheat grown in the areas, various tissues of the crop and the corresponding rhizosphere soils were collected during the harvest season of winter wheat. The mean concentrations of USEPA 15 priority PAHs (sum of the three- to six-ring PAHs) ranged from 486 to 1117 μg kg^-1 in the rhizosphere soils, indicating serious PAH contamination. Based on both the isomeric ratios of PAHs and a principal component analysis (PCA), the main sources of PAHs in the agricultural soils were from combustion of biomass, coal and petroleum, and petroleum. ∑₁₅PAHs were significantly (p < 0.001) higher in the roots (287-432 μg kg^-1) than those in aerial tissues (221-310 μg kg^-1). There were two decreasing gradients of PAH concentrations, one from roots, stems to leaves, and the other from glumes to grains. Regardless of sampling sites, most PAHs detected in the roots and in the aerial tissues were three-ring PAHs (acenaphthene, acenaphthylene, fluorene, phenanthrene, and anthracene) and the percentages of three-ring PAHs were much higher in the aerial tissues (72.5-82.7%) than in the roots (49.5-74.0%) and in the rhizosphere soils (36.3-65.7%). The distribution of PAHs with different ring numbers in the stems, leaves, and glumes was quite similar to each other but was significantly different from that of the roots and rhizosphere soils. Combined with significant results from partial correlation and linear regression models, the present study suggested that partial three- to four-ring PAHs in the aerial tissues are derived from root-soil uptake and that six-ring PAHs may come from the air-to-leaf pathway, although the quantity contribution of foliar uptake and root uptake was yet to be further studied.

Carotenoid and superoxide dismutase are the most effective antioxidants participating in ROS scavenging in phenanthrene accumulated wheat leaf

Polycyclic aromatic hydrocarbons (PAHs) are a kind of pollutants which could stimulate stress reaction in plant cells. In this study, we systematically verify that PAHs could induce an oxidative stress in plants, and describe their damages on wheat leaf subcellular structure and organelle, together with the contributions of antioxidants working against reactive oxygen species. The observation of transmission electron microscope exhibits that cell structures become plasmolyzed and distorted, and organelles disappear under phenanthrene (a model PAH) treatments. Osmiophilic granules arise with increasing phenanthrene concentrations, displaying the evidence for oxidative stress. As more H₂O₂ produce, and the accumulation of H₂O₂ is a fatal reason for cell death under PAH treatments. Through cluster analysis, Pearson correlation coefficient, principal component analysis and redundancy analysis, carotenoid and superoxide dismutase are the two most effective antioxidants to scavenge superoxide radicals among nine major antioxidants (ascorbate, glutathione, polyamines, α-tocopherol, carotenoid, catalases, ascorbate peroxidase, superoxide dismutase and glutathione-S-transferase), glutathione-S-transferase is a potential antioxidant, and Asa-GSH cycle would turn active under higher phenanthrene treatments. Ascorbate peroxidase and α-tocopherol would cause leaf moisture increase. Thus, this work provides better comprehension on the antioxidant performances and their potential application to improving plants' resistance under PAH pollution in the environment.

Apoplastic and symplastic uptake of phenanthrene in wheat roots

The contamination of agricultural crops by polycyclic aromatic hydrocarbons (PAHs) has drawn considerable attention due to their carcinogenicity, mutagenicity, and toxicity. However, the uptake process of PAHs in plant roots has not been clearly understood. In this work, we first study the radial uptake of phenanthrene in hydroculture wheat roots by vacuum-infiltration-centrifugation method. The concentration-dependent kinetics of apoplastic and symplastic uptake at phenanthrene concentrations of 0-6.72 μM for 4 h can be described with the Langmuir and Michaelis-Menten equations, respectively; whereas, their time-dependent kinetics at 5.60 μM phenanthrene for 36 h follow the Elovich equation. The apoplastic and symplastic uptake increases with temperature of 15-35 °C. The apparent Arrhenius activation energies for apoplastic and symplastic uptake are 77.5 and 9.39 KJ mol^-1, respectively. The symplastic uptake accounts for over 55% of total phenanthrene uptake, suggesting that symplast is the dominant pathway for wheat root phenanthrene uptake. Larger volume of symplast in roots and lower activation energy lead to the greater contribution of symplast to total uptake of phenanthrene. Our results provide not only novel insights into the mechanisms on the uptake of PAHs by plant roots, but also the help to optimize strategies for crop safety and phytoremediation of PAH-contaminated soil/water.

Comparative transcriptomic evidence for Tween80-enhanced biodegradation of phenanthrene by Sphingomonas sp. GY2B

Previous study of the effects of surfactants on the biodegradation of phenanthrene focused on investigating alterations of the cell characteristics of Sphingomonas sp. GY2B. However, genes regulation associated with biodegradation and biological processes in response to the presence of surfactants, remains unclear. In this study, comparative transcriptome analysis was conducted to observe the gene expression of GY2B during phenanthrene biodegradation in the presence and absence of Tween80. A diverse set of genes was regulated by Tween80, leading to increased biodegradation of phenanthrene by GY2B: (i) Tween80 increased expression of genes related to H⁺ transport in the plasma membrane to provide a driving force (i.e., ATP) for accelerating transmembrane transport of phenanthrene with increasing Tween80 concentrations, thereby enhancing the uptake and degradation of phenanthrene by GY2B; (ii) Tween80 (1 and 8 CMC) promoted intracellular biodegradation of phenanthrene by stimulating expression of genes encoding dioxygenases and monooxygenase, increasing expression of genes involved in intracellular metabolic processes (e.g., TCA cycle); and (iii) Tween80 likely increased GY2B vitality and growth by inducing expression of genes associated with ABC transporters and protein transport, regulating genes involved in other biological processes (e.g., transcription, translation).

Phenanthrene-responsive microRNAs and their targets in wheat roots

MicroRNAs (miRNAs) play key roles in plant growth, development and responses to abiotic stress. Polycyclic aromatic hydrocarbons (PAHs) are ubiquitous environmental pollutants. However, it is yet unknown how miRNAs work during PAH uptake by plant roots. Thus, in this study we ascertain phenanthrene (a model PAH)-responsive miRNAs using small RNA high-throughput deep sequencing and their target genes in wheat roots. We identified 108 conserved and non-conserved miRNA members belonging to 82 miRNA families and found 11 differentially expressed miRNAs, among which four miRNAs (miR156, miR164, miR171a and miR9678-3p) were up-regulated and the other seven miRNAs (miR398, miR531, miR1121, miR5048-5p, miR9653b, miR9773 and miR9778) were down-regulated. ABC-transporter-related Gene CA704421 and CA697226 did not respond to phenanthrene exposure. miR156 and miR164 might regulate directly the growth and development of wheat roots by targeting SPL and NAC, respectively. miR398 and miR1121 could regulate oxidative reactions to respond to phenanthrene stress. Additionally, miR9773 might involve phenanthrene metabolism through acting on CYP450. Therefore, it is concluded that phenanthrene triggers variation in miRNA expression, which is associated with uptake of and response to phenanthrene. These findings are of significance for further understanding miRNA regulation mechanisms on PAH uptake, and providing guidance for screening of resistant cultivars in crop production and phytoremediation of PAH-contaminated soils or water at genetic level.

Roots alterations in presence of phenanthrene may limit co-remediation implementation with Noccaea caerulescens

Co-phytoremediation of both trace elements and polycyclic aromatic hydrocarbons (PAH) is an emerging technique to treat multi-contaminated soils. In this study, root morphological and structural features of the heavy metal hyperaccumulator Noccaea caerulescens, exposed to a model PAH phenanthrene (PHE) in combination with cadmium (Cd), were observed. In vitro cultivated seedlings were exposed to 2 mM of PHE and/or 5 μM of Cd for 1 week. Co-phytoremediation effectiveness appeared restricted because of a serious inhibition (about 40%) of root and shoot biomass production in presence of PHE, while Cd had no significant adverse effect on these parameters. The most striking effects of PHE on roots were a decreased average root diameter, the inhibition of cell and root hair elongation and the promotion of lateral root formation. Moreover, endodermal cells with suberin lamellae appeared closer to the root apex when exposed to PHE compared to control and Cd treatments, possibly due to modified lateral root formation. The stage with well-developed suberin lamellae was not influenced by PHE whereas peri-endodermal layer development was impaired in PHE-treated plants. Many of these symptoms were similar to a water-deficit response. These morphological and structural root modifications in response to PHE exposition might in turn limit Cd phytoextraction by N. caerulescens in co-contaminated soils.

The retention and distribution of parent, alkylated, and N/O/S-containing polycyclic aromatic hydrocarbons on the epidermal tissue of mangrove seedlings

The polycyclic aromatic hydrocarbons (PAHs) located on the epidermal tissues showed distinctive toxic effects to root, while the retention and distribution of PAHs on mangrove seedlings poorly understood. Our results confirmed that the partition coefficients (K_f) of the PAHs retained on the epidermal tissue of mangrove roots, such as Kandelia obovata, Avicennia marina and Aegiceras corniculatum, were much higher than the Poaceae plants roots, for example wheat and maize (Wild et al., 2005). Moreover, to the parent and alkyl PAHs, a well negative correlation was observed between the surface polarity of these three species of mangrove root and the K_f values (p < 0.05). To the N/O/S containing PAHs, these relationships were not obviously due to existing of the π-π, n-π interactions and hydrogen bonding between the N/O/S-containing PAHs and epidermal tissues. The PAHs retained on these three species of mangrove root epidermal tissues formed larger clusters than that of on Poaceae plants, such as wheat and maize (Wild et al., 2005) due to the limitation of the suberization of the root exodermis and endodermis. After exposure of 30 d, rhizo- and endophytic bacteria degraded parts of the N/O/S-containing PAHs to medium-lifetime fluorescence substances. To our knowledge, this is the first time to assess the retention of PAHs on the epidermal tissue of mangrove root, which will improve our understanding of the root uptake PAHs process.

Phenanthrene-triggered Chlorosis is caused by elevated Chlorophyll degradation and leaf moisture

Leaf is an important organ in responding to environmental stresses. To date, chlorophyll metabolism under polycyclic aromatic hydrocarbon (PAH) stress is still unclear. Here we reveal, for the first time, the chlorophyll metabolism of wheat seedling leaves in response to phenanthrene (a model PAH) exposure. In this study, the hydroponic experiment was employed, and the wheat seedlings were exposed to phenanthrene to observe the response at day 1, 3, 5, 7 and 9. Over the exposure time, wheat leaf color turns light. With the accumulation of phenanthrene, the concentrations of glutamate, 5-aminolevulinic acid, uroporphyrinogen III, protoporphyrin IX, Mg-protoporphyrin IX and protochlorophyllide increase while the concentrations of porphobilinogen and Chlorophyll b decrease. Also chlorophyll a content rises initially and then declines. Uroporphyrinogen III synthase and chlorophyllase are activated and porphobilinogen deaminase activity declines in the treatments. Both chlorophyll synthesis and degradation are enhanced, but the degradation rate is faster. Phenanthrene accumulation has significant and positive effects on increase of glutamate, 5-aminolevulinic acid, uroporphyrinogen III, protoporphyrin IX, Mg-protoporphyrin IX and protochlorophyllide concentrations. There is a negative correlation between phenanthrene accumulation and total chlorophyll. Additionally, the leaf moisture increases. Therefore, it is concluded that wheat leaf chlorosis results from a combination of accelerated chlorophyll degradation and elevated leaf moisture under phenanthrene exposure. Our results are helpful not only for better understanding the toxicity of PAHs to plants and crop PAH-adaptive mechanism in the environment, but also for potentially employing the changes of the chlorophyll-synthesizing precursors and enzyme activities in plant leaves as indicators of plant response to PAH pollution.

Proteomic analysis of plasma membrane proteins in wheat roots exposed to phenanthrene

Polycyclic aromatic hydrocarbons (PAHs) are potentially carcinogenic and toxic to humans through ingestion of contaminated food crops. PAHs can enter crop roots through proton/PAH symporters; however, to date, the symporter remains unclear. Here we reveal, for the first time, the plasma membrane proteome of Triticum aestivum seedling roots in response to phenanthrene (a model PAH) exposure. Two-dimensional gel electrophoresis (2-DE) coupled with MALDI-TOF/TOF-MS and protein database search engines were employed to analyze and identify phenanthrene-responsive proteins. Over 192 protein spots are reproducibly detected in each gel, while 8 spots are differentially expressed under phenanthrene treatment. Phenanthrene induces five up-regulated proteins distinguished as 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferase 2, enolase, heat shock protein 80-2, probable mediator of RNA polymerase II transcription subunit 37e (heat shock 70-kDa protein 1), and lactoylglutathione lyase. Three proteins identified as adenosine kinase 2, 4-hydroxy-7-methoxy-3-oxo-3,4-dihydro-2H-1,4-benzoxazin-2-yl glucoside beta-D-glucosidase 1c, and glyceraldehyde-3-phosphate dehydrogenase 3 are down-regulated under exposure to phenanthrene. The up-regulated proteins are related to plant defense response, antioxidant system, and glycolysis. The down-regulated proteins involve the metabolism of high-energy compounds and plant growth. Magnesium, which is able to bind to enolase, can enhance the transport of phenanthrene into wheat roots. Therefore, it is concluded that phenanthrene can induce differential expression of proteins in relation to carbohydrate metabolism, self-defense, and plant growth on wheat root plasma membrane. This study not only provides novel insights into PAH uptake by plant roots and PAH stress responses, but is also a good starting point for further determination and analyses of their functions using genetic and other approaches.