Siderophores in Cloud Waters and Potential Impact on Atmospheric Chemistry: Photoreactivity of Iron Complexes under Sun-Simulated Conditions

Influence of strong iron-binding ligands on cloud water oxidant capacity

Iron (Fe) plays a dual role in atmospheric chemistry: it is involved in chemical and photochemical reactivity and serves as a micronutrient for microorganisms that have recently been shown to produce strong organic ligands. These ligands control the reactivity, mobility, solubility and speciation of Fe, which have a potential impact on Fe bioavailability and cloud water oxidant capacity. In this work, the concentrations of Fe-binding ligands and the conditional stability constants were experimentally measured for the first time by Competitive Ligand Exchange-Adsorptive Cathodic Stripping Voltammetry (CLE-ACSV) technique in cloud water samples collected at puy de Dôme (France). The conditional stability constants, which indicate the strength of the Fe-ligand complexes, are higher than those considered until now in cloud chemistry (mainly Fe-oxalate). To understand the effect of Fe complexation on cloud water reactivity, we used the CLEPS cloud chemistry model. According to the model results, we found that Fe complexation impacts the hydroxyl radical formation rate: contrary to our expectations, Fe complexation by natural organic ligands led to an increase in hydroxyl radical production. These findings have important impacts on cloud chemistry and the global iron cycle.

Emerging investigator series: aqueous-phase processing of atmospheric aerosol influences dissolution kinetics of metal ions in an urban background site in the Po Valley

Metals are an important atmospheric aerosol component; their impacts on health and the environment depend also on their solubility, dissolution kinetics and chemical form in which they are present in the aerosol (e.g., oxidation state, inorganic salt or oxide/hydroxide, organic complex). In this study, we investigated the impact of fog processing on the solubility and dissolution of metals in PM_2.5 samples collected in an urban background site in Padova (Italy). For each sample, we determined the solubility and dissolution kinetics of 17 elements in a solution simulating fog water in the winter season in the Po Valley (pH 4.7, T 5 °C, and water content ∼0.5 g m^-3). We also determined water-soluble inorganic and organic compounds having ligand properties. We used the model E-AIM IV to calculate the aerosol liquid water (ALW) content and pH, and we used the model Visual MinteQ to determine the speciation picture of the most important elements under conditions of both deliquescent aerosol (ALW and pH calculated using E-AIM IV, ambient temperature) and simulated fog. We found that the dissolution of Al, Cu, and Fe metal ions, predicted to be largely coordinated with organic compounds under fog conditions, was either immediate or considerably faster in samples collected on days with observed fog events compared with those collected on days having drier conditions. For readily soluble elements, such as As, Cd, Cr, Sr, and Zn, such an effect was not observed. Our study highlights the importance of coordination chemistry in atmospheric aerosol and fog in determining the bioavailability of particle-bound metals.

Acidity and the multiphase chemistry of atmospheric aqueous particles and clouds

The acidity of aqueous atmospheric solutions is a key parameter driving both the partitioning of semi-volatile acidic and basic trace gases and their aqueous-phase chemistry. In addition, the acidity of atmospheric aqueous phases, e.g., deliquesced aerosol particles, cloud, and fog droplets, is also dictated by aqueous-phase chemistry. These feedbacks between acidity and chemistry have crucial implications for the tropospheric lifetime of air pollutants, atmospheric composition, deposition to terrestrial and oceanic ecosystems, visibility, climate, and human health. Atmospheric research has made substantial progress in understanding feedbacks between acidity and multiphase chemistry during recent decades. This paper reviews the current state of knowledge on these feedbacks with a focus on aerosol and cloud systems, which involve both inorganic and organic aqueous-phase chemistry. Here, we describe the impacts of acidity on the phase partitioning of acidic and basic gases and buffering phenomena. Next, we review feedbacks of different acidity regimes on key chemical reaction mechanisms and kinetics, as well as uncertainties and chemical subsystems with incomplete information. Finally, we discuss atmospheric implications and highlight the need for future investigations, particularly with respect to reducing emissions of key acid precursors in a changing world, and the need for advancements in field and laboratory measurements and model tools.

The enhanced mixing states of oxalate with metals in single particles in Guangzhou, China

Recently, internal mixing states of oxalate with metals in single particles have been reported from field studies, yet the role of metals in the formation processes of oxalate remains unclear due to the diversity of chemical components and complex atmospheric environment. In this study, the mixing states of oxalate with five metals, including zinc (Zn), copper (Cu), lead (Pb), vanadium (V) and iron (Fe) were investigated in Guangzhou, China. It was found that 55% of oxalate-containing particles were internally mixed with these metals. The number fraction of oxalate in the metal-containing particles ranged from 5.4-26%, which is much higher than that in the total detected particles (4.0%), indicating significant enrichment of oxalate in the metal-containing particles. Enhanced oxalate production was found in the Fe- and V-containing particles based on distinctly higher relative peak area (RPA) ratios of oxalate to its precursors compared to the total particles, possibly due to enhanced aqueous phase reactions in the Fe- and V-containing particles. However, enrichment of oxalate in the Zn-, Pb-, and Cu-containing particles was possibly associated with complexation of gas phase oxalic acid with the metals, as indicated by the small increase in RPA ratios in these particles. On the other hand, the internal mixing of oxalate with metals was found to provide a way of efficient photolysis of oxalate-metal complexes, which led to a decrease in oxalate after sunrise in the metal-containing particles. In this study, the enhanced mixing states of oxalate with metals have revealed the important role of metals in the production and degradation of oxalate, providing insights for the evaluation of metals in the formation processes of organic aerosol in field studies, which is beneficial to the further study of air pollution in metal emission areas.

Significant role of iron on the fate and photodegradation of enrofloxacin

Enrofloxacin (ENR) belongs to the fluoroquinolone (FQ) antibiotics family, which are contaminants of emerging concern frequently found in effluents. Although many works studying photo-Fenton process for FQ degradation have been reported, there are no reports analysing in deep the effect of iron complexation, as well as other metals, towards FQs' photolysis, which, evidently, also contributes in the overall degradation of the pollutant. Therefore, in this work, we report a comparative study between the photochemical fate of ENR and its complex with Fe(III) under simulated sunlight irradiation. In addition, the effect of dissolved oxygen, self-sensitization process, and H₂O₂ addition on the studied photochemical systems are also investigated. Results indicate that, for free and iron-complexed ENR, singlet oxygen (¹O₂) is generated from the interaction of its triplet state with ground state oxygen. Half-life time (t_1/2) of ENR under sun simulated conditions is estimated to be around 22 min, while complexation with iron enhances its photostability, leading to a t_1/2 of 2.1 h. Such finding indicates that at least the presence of iron, might notably increase the residence time of these pollutants in the environment. Eventually, only with the addition of H₂O₂, the FQ-iron complex is efficiently degraded due to photo-Fenton process even at circumneutral pH values due to the high stability of the formed complex. Finally, after LC/FT-ICR MS analysis, 39 photoproducts are detected, of which the 14 most abundant ones are identified. Results indicate that photoproducts formation is pH and iron dependent.

Photoactive siderophores: Structure, function and biology

It is well known that bacteria and fungi have evolved sophisticated systems for acquiring the abundant but biologically inaccessible trace element iron. These systems are based on high affinity Fe(III)-specific binding compounds called siderophores which function to acquire, transport, and process this essential metal ion. Many hundreds of siderophores are now known and their numbers continue to grow. Extensive studies of their isolation, structure, transport, and molecular genetics have been undertaken in the last three decades and have been comprehensively reviewed many times. In this review we focus on a unique subset of siderophores that has only been recognized in the last 20 years, namely those whose iron complexes display photoactivity. This photoactivity, which typically results in the photooxidation of the siderophore ligand with concomitant reduction of Fe(III) to Fe(II), seemingly upsets the siderophore paradigm of forming and transporting only extremely stable Fe(III) complexes into microbial cells. Here we review their structure, synthesis, photochemistry, photoproduct coordination chemistry and explore the potential biological and ecological consequences of this photoactivity.

Enhanced photochemical formation of secondary organic aerosols during the COVID-19 lockdown in Northern China

To eliminate the spread of a novel coronavirus breaking out in the end of 2019 (COVID-19), the Chinese government has implemented a nationwide lockdown policy after the Chinese lunar New Year of 2020, resulting in a sharp reduction in air pollutant emissions. To investigate the impact of the lockdown on aerosol chemistry, the number fraction, size distribution and formation process of oxalic acid (C₂) containing particles and its precursors were studied using a single particle aerosol mass spectrometer (SPAMS) at the urban site of Liaocheng in the North China Plain (NCP). Our results showed that five air pollutants (i.e., PM_2.5, PM₁₀, SO₂, NO₂, and CO) decreased by 30.0-59.8% during the lockdown compared to those before the lockdown, while O₃ increased by 63.9% during the lockdown mainly due to the inefficient titration effect of O₃ via NO reduction. The increased O₃ concentration can boost the atmospheric oxidizing capacity and further enhance the formation of secondary organic aerosols, thereby significantly enhancing the C₂ particles and its precursors as observed during the lockdown. Before the lockdown, C₂ particles were significantly originated from biomass burning emissions and their subsequent aqueous-phase oxidation. The hourly variation patterns and correlation analysis before the lockdown suggested that relative humidity (RH) and aerosol liquid water content (ALWC) played a key role in the formation of C₂ particles and the increased aerosol acidity can promote the conversion of precursors such as glyoxal (Gly) and methyglyoxal (mGly) into C₂ particles in the aqueous phase. RH and ALWC decreased sharply but O₃ concentration and solar radiation increased remarkably during the lockdown, the O₃-dominated photochemical pathways played an important role in the formation of C₂ particles in which aerosol acidity was ineffective. Our study indicated that air pollution treatment sponges on a joint-control and balanced strategy for controlling numerous pollutants.

Catalytic effects of photogenerated Fe(II) on the ligand-controlled dissolution of Iron(hydr)oxides by EDTA and DFOB

Low bioavailability of iron due to poor solubility of iron(hydr)oxides limits the growth of microorganisms and plants in soils and aquatic environments. Previous studies described accelerated dissolution of iron(hydr)oxides under continuous illumination, but did not distinguish between photoreductive dissolution and non-reductive processes in which photogenerated Fe(II) catalyzes ligand-controlled dissolution. Here we show that short illuminations (5-15 min) accelerate the dissolution of iron(hydr)oxides by ligands during subsequent dark periods under anoxic conditions. Suspensions of lepidocrocite (Lp) and goethite (Gt) (1.13 mM) with 50 μM EDTA or DFOB were illuminated with UV-A light of comparable intensity to sunlight (pH 7.0, bicarbonate-CO₂ buffered solutions). During illumination, the rate of Fe(II) production was highest with Gt-EDTA; followed by Lp-EDTA > Lp-DFOB > Lp > Gt-DFOB > Gt. Under anoxic conditions, photochemically produced Fe(II) increased dissolution rates during subsequent dark periods by factors of 10-40 and dissolved Fe(III) reached 50 μM with DFOB and EDTA. Under oxic conditions, dissolution rates increased by factors of 3-5 only during illumination. With DFOB dissolved Fe(III) reached 35 μM after 10 h of illumination, while with EDTA it peaked at 15 μM and then decreased to below 2 μM. The observations are explained and discussed based on a kinetic model. The results suggest that in anoxic bottom water of ponds and lakes, or in microenvironments of algal blooms, short illuminations can dramatically increase the bioavailability of iron by Fe(II)-catalyzed ligand-controlled dissolution. In oxic environments, photostable ligands such as DFOB can maintain Fe(III) in solution during extended illumination.

Isomerization and Degradation of Levoglucosan via the Photo-Fenton Process: Insights from Aqueous-Phase Experiments and Atmospheric Particulate Matter

So far, studies on the conversion of stereochemistry under photo-Fenton conditions and their atmospheric implication are still rare. Here, we found that the biomass burning marker, the chiral compound levoglucosan (L), undergoes oxidative degradation under photo-Fenton conditions and can be isomerized into mannosan (M) and galactosan (G) simultaneously. Among the formic acid, acetic acid, and oxalic acid in the degradation products of levoglucosan, it was found that the yield of formation of formic acid in the photo-Fenton pathway can be as high as 86%. It is worth noting that both levoglucosan and its isomers are present in the atmosphere and their concentrations are strongly correlated. At the same time, the range of their concentration ratios, L/(G + M), measured in the photo-Fenton experiments in the laboratory was found to agree well with that measured in atmospheric PM_2.5 samples. However, the sources of L, G, and M in the atmosphere are complex, and the photo-Fenton reaction may be an essential pathway for the distribution of L, G, and M in the atmosphere.

Application of a microbial siderophore desferrioxamine B in sunlight/Fe3+/persulfate system: from the radical formation to the degradation of atenolol at neutral pH

The present work reported a modified persulfate activation process with a microbial siderophore named desferrioxamine B (DFOB). DFOB was a natural complexing agent and could complex with Fe³⁺ strongly. The photochemical reactivity of Fe(III)-DFOB was studied. Fe²⁺ and HO^• were produced from Fe(III)-DFOB photolysis. Furthermore, the degradation of atenolol (ATL) was followed in light/persulfate (PS)/Fe(III)-DFOB system. The main oxidative radicals were SO₄^•- in this system. The results of pH effect showed that there was no obviously fluctuation on ATL degradation efficiency with the pH increased from 2.5 to 8.4. Moreover, k_SO4•-,DFOB was determined by laser flash photolysis (LFP) experiments. DFOB had positive effect on Fe²⁺ formation but negative effect on ATL degradation due to the high react rate constant between DFOB and SO₄^•-. The effects of chloride and carbonate ion were also investigated. The results in this study proposed the reaction mechanism of the modified persulfate activation process, and it could be applied in neutral and weak-alkaline pH range.

Insight into the photochemistry of atmospheric oxalate through hourly measurements in the northern suburbs of Nanjing, China

Oxalate-iron is an integral part of the photochemical system in the atmosphere. Here, we combined high-resolution online observations and laboratory simulations to discuss the distribution of oxalate and oxalate-iron photochemical system in Nanjing atmosphere at the molecular level. The results show that the oxidation state of iron in the oxalate-iron photochemical system changes significantly and regularly. Among them, Fe (II)/Fe (III) is 3.82 during the day and 0.76 at night. At the same time, Cl^- may accelerate the generation of hydroxyl radicals in the system and promote the photooxidation rate of oxalate. Oxalate can be converted into formate (C1) and acetate (C2) in the photochemical system, but <4% of degraded oxalate is converted, which means that the photochemical system may not be the main source of formate and acetate in the atmosphere. Besides, the ratio of C1/C2 < 1 in the conversion is opposite to the ratio of C1/C2 > 1 in the general secondary conversion, which means that not all ratio of C1/C2 in the photochemical pathway is >1. These results are beneficial for us to understand the effect of the oxalate-iron photochemical system on the distribution of oxalate in the atmosphere, and also help us to analyze the conversion of organics in the atmospheric aqueous phase.

Photochemistry of the Cloud Aqueous Phase: A Review

This review paper describes briefly the cloud aqueous phase composition and deeply its reactivity in the dark and mainly under solar radiation. The role of the main oxidants (hydrogen peroxide, nitrate radical, and hydroxyl radical) is presented with a focus on the hydroxyl radical, which drives the oxidation capacity during the day. Its sources in the aqueous phase, mainly through photochemical mechanisms with H₂O₂, iron complexes, or nitrate/nitrite ions, are presented in detail. The formation rate of hydroxyl radical and its steady state concentration evaluated by different authors are listed and compared. Finally, a paragraph is also dedicated to the sinks and the reactivity of the HO^• radical with the main compounds found in the cloud aqueous phase. This review presents an assessment of the reactivity in the cloud aqueous phase and shows the significant potential impact that this medium can have on the chemistry of the atmosphere and more generally on the climate.

Effect of endogenous microbiota on the molecular composition of cloud water: a study by Fourier-transform ion cyclotron resonance mass spectrometry (FT-ICR MS)

A cloud water sample collected at the puy de Dôme observatory (PUY) has been incubated under dark conditions, with its endogenous microbiota at two different temperatures (5 and 15 °C), and the change in the molecular organic composition of this sample was analyzed by Fourier transform ion cyclotron resonance mass spectrometry (FT-ICR MS). Microorganisms were metabolically active and strongly modified the dissolved organic matter since they were able to form and consume many compounds. Using Venn diagrams, four fractions of compounds were identified: (1) compounds consumed by microbial activity; (2) compounds not transformed during incubation; (3) compounds resulting from dark chemistry (i.e., hydrolysis and Fenton reactions) and, finally, (4) compounds resulting from microbial metabolic activity. At 15 °C, microorganisms were able to consume 58% of the compounds initially present and produce 266 new compounds. For this cloud sample, the impact of dark chemistry was negligible. Decreasing the temperature to 5 °C led to the more efficient degradation of organic compounds (1716 compounds vs. 1094 at 15 °C) but with the less important production of new ones (173). These transformations were analyzed using a division into classes based on the O/C and H/C ratios: lipid-like compounds, aliphatic/peptide-like compounds, carboxylic-rich alicyclic molecule (CRAM)-like structures, carbohydrate-like compounds, unsaturated hydrocarbons, aromatic structures and highly oxygenated compounds (HOCs). Lipid-like, aliphatic/peptide-like and CRAMs-like compounds were the most impacted since they were consumed to maintain the microbial metabolism. On the contrary, the relative percentages of CRAMs and carbohydrates increased after incubation.

Cyanobacterial Siderophores-Physiology, Structure, Biosynthesis, and Applications

Siderophores are low-molecular-weight metal chelators that function in microbial iron uptake. As iron limits primary productivity in many environments, siderophores are of great ecological importance. Additionally, their metal binding properties have attracted interest for uses in medicine and bioremediation. Here, we review the current state of knowledge concerning the siderophores produced by cyanobacteria. We give an overview of all cyanobacterial species with known siderophore production, finding siderophores produced in all but the most basal clades, and in a wide variety of environments. We explore what is known about the structure, biosynthesis, and cycling of the cyanobacterial siderophores that have been characterized: Synechobactin, schizokinen and anachelin. We also highlight alternative siderophore functionality and technological potential, finding allelopathic effects on competing phytoplankton and likely roles in limiting heavy-metal toxicity. Methodological improvements in siderophore characterization and detection are briefly described. Since most known cyanobacterial siderophores have not been structurally characterized, the application of mass spectrometry techniques will likely reveal a breadth of variation within these important molecules.

Metatranscriptomic exploration of microbial functioning in clouds

Clouds constitute the uppermost layer of the biosphere. They host diverse communities whose functioning remains obscure, although biological activity potentially participates to atmospheric chemical and physical processes. In order to gain information on the metabolic functioning of microbial communities in clouds, we conducted coordinated metagenomics/metatranscriptomics profiling of cloud water microbial communities. Samples were collected from a high altitude atmospheric station in France and examined for biological content after untargeted amplification of nucleic acids. Living microorganisms, essentially bacteria, maintained transcriptional and translational activities and expressed many known complementary physiological responses intended to fight oxidants, osmotic variations and cold. These included activities of oxidant detoxification and regulation, synthesis of osmoprotectants/cryoprotectants, modifications of membranes, iron uptake. Consistently these energy-demanding processes were fueled by central metabolic routes involved in oxidative stress response and redox homeostasis management, such as pentose phosphate and glyoxylate pathways. Elevated binding and transmembrane ion transports demonstrated important interactions between cells and their cloud droplet chemical environments. In addition, polysaccharides, potentially beneficial for survival like exopolysaccharides, biosurfactants and adhesins, were synthesized. Our results support a biological influence on cloud physical and chemical processes, acting notably on the oxidant capacity, iron speciation and availability, amino-acids distribution and carbon and nitrogen fates.

Formation and Evolution of aqSOA from Aqueous-Phase Reactions of Phenolic Carbonyls: Comparison between Ammonium Sulfate and Ammonium Nitrate Solutions

We investigate the effects of sulfate and nitrate on the formation and evolution of secondary organic aerosol formed in the aqueous phase (aqSOA) from photooxidation of two phenolic carbonyls emitted from wood burning. AqSOA was formed efficiently from the photooxidation of both syringaldehyde (C₉H₁₀O₄) and acetosyringone (C₁₀H₁₂O₄) in ammonium sulfate and ammonium nitrate solutions, with mass yields ranging from 30% to 120%. Positive matrix factorization on the organic mass spectra acquired by an Aerosol Mass Spectrometer revealed a combination of functionalization, oligomerization, and fragmentation processes in the chemical evolution of aqSOA. Functionalization and oligomerization dominated in the first 4 h of reaction, with phenolic oligomers and their derivatives significantly contributing to aqSOA formation; and oxidation of the first-generation products led to an abundance of oxygenated ring-opening products. Degradation rates of syringaldehyde and acetosyringone in nitrate solutions were 1.5 and 3.5 times faster than rates in sulfate solutions, and aqSOA yields in nitrate experiments are twice as high as in sulfate experiments. Nitrate likely promoted the reactions because it is a photolytic source of OH radicals, while sulfate is not, highlighting the importance of aerosol-phase nitrate in the formation of aqSOA by facilitating the photooxidation of organic precursors.