Salinity-Aided Selection of Progressive Onset Denitrifiers as a Means of Providing Nitrite for Anammox

Robustness of the synergistic partial-denitrification, anammox, and fermentation process for treating domestic and nitrate wastewaters under fluctuating C/N ratios

The synergistic partial-denitrification, anammox, and fermentation (SPDAF) process presents a promising solution to treat domestic and nitrate wastewaters. However, its capability to handle fluctuating C/N ratios (the ratios of COD to total inorganic nitrogen) in practical applications remains uncertain. In this study, the SPDAF process was operated for 236 days with C/N ratios of 0.7-3.5, and a high and stable efficiency of nitrogen removal (84.9 ± 7.8%) was achieved. The denitrification and anammox contributions were 6.1 ± 7.1% and 93.9 ± 7.1%, respectively. Batch tests highlighted the pivotal role of in situ fermentation at low biodegradable chemical oxygen demand (BCOD)/NO3- ratios. As the BCOD/NO3- ratios increased from 0 to 6, the NH4+ and NO3- removal rates increased, while the anammox contribution decreased from 100% to 80.1% but remained the primary pathway of nitrogen removal. The cooperation and balanced growth of denitrifying bacteria, anammox bacteria, and fermentation bacteria contributed to the system's robustness under fluctuating C/N ratios.

Comprehensive metagenomic and enzyme activity analysis reveals the inhibitory effects and potential toxic mechanism of tetracycline on denitrification in groundwater

The widespread use of tetracycline (TC) inevitably leads to its increasing emission into groundwater. However, the potential risks of TC to denitrification in groundwater remain unclear. In this study, the effects of TC on denitrification in groundwater were systematically investigated at both the protein and gene levels from the electron behavior aspect for the first time. The results showed that increasing TC from 0 to 10 µg·L-1 decreased the nitrate removal rate from 0.41 to 0.26 mg·L-1·h-1 while enhancing the residual nitrite concentration from 0.52 mg·L-1 to 50.60 mg·L-1 at the end of the experiment. From a macroscopic view, 10 µg·L-1 TC significantly inhibited microbial growth and altered microbial community structure and function in groundwater, which induced the degeneration of denitrification. From the electron behavior aspect (the electron production, electron transport and electron consumption processes), 10 µg·L-1 TC decreased the concentration of electron donors (nicotinamide adenine dinucleotide, NADH), electron transport system activity, and denitrifying enzyme activities at the protein level. At the gene level, 10 µg·L-1 TC restricted the replication of genes related to carbon metabolism, the electron transport system and denitrification. Moreover, discrepant inhibitory effects of TC on individual denitrification steps, which led to the accumulation of nitrite, were observed in this study. These results provide the information that is necessary for evaluating the potential environmental risk of antibiotics on groundwater denitrification and bring more attention to their effects on geochemical nitrogen cycles.

A review of microbial nitrogen transformations and microbiome engineering for biological nitrogen removal under salinity stress

The osmotic stress caused by salinity exerts severe inhibition on the process of biological nitrogen removal (BNR), leading to the deterioration of biosystems and the discharge of nitrogen with saline wastewater. Feasible strategies to solve the bottleneck in saline wastewater treatment have attracted great attention, but relevant studies to improve nitrogen transformations and enhance the salt-tolerance of biosystems in terms of microbiome engineering have not been systematically reviewed and discussed. This work attempted to provide a more comprehensive explanation of both BNR and microbiome engineering approaches for saline wastewater treatment. The effect of salinity on conventional BNR pathways, nitrification-denitrification and anammox, was summarized at cellular and metabolic levels, including the nitrogen metabolic pathways, the functional microorganisms, and the inhibition threshold of salinity. Promising nitrogen transformations, such as heterotrophic nitrification-aerobic denitrification, ammonium assimilation and the coupling of conventional pathways, were introduced and compared based on advantages and challenges in detail. Strategies to improve the salt tolerance of biosystems were proposed and evaluated from the perspective of microbiome engineering. Finally, prospects of future investigation and applications on halophilic microbiomes in saline wastewater treatment were discussed.

The enrichment of more functional microbes induced by the increasing hydraulic retention time accounts for the increment of autotrophic denitrification performance

With pyrite (FeS2) and polycaprolactone (PCL) as electron donors, three denitrification systems, namely FeS2-based autotrophic denitrification (PAD) system, PCL-supported heterotrophic denitrification (PHD) system and split-mixotrophic denitrification (PPMD) system, were constructed and operated under varying hydraulic retention times (HRT, 1-48 h). Compared with PAD or PHD, the PPMD system could achieve higher removals of NO3--N and PO43--P, and the effluent SO42- concentration was greatly reduced to 7.28 mg/L. Similarly, the abundance of the dominant genera involved in the PAD (Thiobacillus, Sulfurimonas, and Ferritrophicum, etc.) or PHD (Syntrophomonas, Desulfomicrobium, and Desulfovibrio, etc.) process all increased in the PPMD system. Gene prediction completed by PICRUSt2 showed that the abundance of the functional genes involved in denitrification and sulfur oxidation all increased with the increase of HRT. This also accounted for the increased contribution of autotrophic denitrification to total nitrogen removal in the PPMD system. In addition, the analysis of metabolic pathways disclosed the specific conversion mechanisms of nitrogen and sulfur inside the reactor.

The long-term effect of glutaraldehyde on the bacterial community in anaerobic ammonium oxidation reactor

A 160-day incubation was performed with two anammox reactors (GA and CK) to investigate the effect of glutaraldehyde. The results indicated that anammox bacteria were very sensitive when glutaraldehyde in GA reactor increased to 40 mg/L, the nitrogen removal efficiency sharply decreased to 11%, only one-quarter of CK. Glutaraldehyde changed spatial distribution of exopolysaccharides, caused anammox bacteria (Brocadia CK_gra75) to disassociate from granules (24.70% of the reads in CK but only 14.09% in GA granules). Metagenome analysis indicated glutaraldehyde led to the denitrifier community succession from strains without nir (nitrite reductase) and nor (nitric oxide reductases) genes to those with them, and the rapid growth of denitrifiers with NodT (an outer membrane factor)-related efflux pumps replacing those with another TolC -related ones. Meanwhile, Brocadia CK_gra75 lacks the NodT proteins. This study provides important insight into community adaptation and potential resistance mechanism in an active anammox community after exposure to disinfectant.

Novel nitrogen removal process in marine aquaculture wastewater treatment using Enteromorpha ferment liquid as carbon

The process performance of partial denitrification of a novel anaerobic fermentation integrated fixed-film activated sludge (IFAS-AFPD) of Enteromorpha was studied. The response surface method was used to determine the optimal reaction conditions, and the operation experiment was carried out under the optimal conditions. The results showed that the nitrogen removal effect was the best when the salinity was 12.2 g•L^-1, the Carbon-Nitrogen ratio (C/N) was 4, the pH was 8.5, and the Nitrite Accumulation Rate, Nitrate Removal Rate, Chemical Oxygen Demand Utilization Rate could reach 77%, 89% and 51%. Experimental results have shown that the NAR of the Enteromorpha ferment liquid system could be maintained at about 74%, which was noteworthy higher than that of the sodium acetate (CH₃COONa) system at 42%; Microbial community analysis showed that Enteromorpha ferment liquid was more beneficial to the growth of Bacteroidetes than CH₃COONa.

Salinity determines performance, functional populations, and microbial ecology in consortia attenuating organohalide pollutants

Organohalide pollutants are prevalent in coastal regions due to extensive intervention by anthropogenic activities, threatening public health and ecosystems. Gradients in salinity are a natural feature of coasts, but their impacts on the environmental fate of organohalides and the underlying microbial communities remain poorly understood. Here we report the effects of salinity on microbial reductive dechlorination of tetrachloroethene (PCE) and polychlorinated biphenyls (PCBs) in consortia derived from distinct environments (freshwater and marine sediments). Marine-derived microcosms exhibited higher halotolerance during PCE and PCB dechlorination, and a halotolerant dechlorinating culture was enriched from these microcosms. The organohalide-respiring bacteria (OHRB) responsible for PCE and PCB dechlorination in marine microcosms shifted from Dehalococcoides to Dehalobium when salinity increased. Broadly, lower microbial diversity, simpler co-occurrence networks, and more deterministic microbial community assemblages were observed under higher salinity. Separately, we observed that inhibition of dechlorination by high salinity could be attributed to suppressed viability of Dehalococcoides rather than reduced provision of substrates by syntrophic microorganisms. Additionally, the high activity of PCE dechlorinating reductive dehalogenases (RDases) in in vitro tests under high salinity suggests that high salinity likely disrupted cellular components other than RDases in Dehalococcoides. Genomic analyses indicated that the capability of Dehalobium to perform dehalogenation under high salinity was likely owing to the presence of genes associated with halotolerance in its genomes. Collectively, these mechanistic and ecological insights contribute to understanding the fate and bioremediation of organohalide pollutants in environments with changing salinity.

Evaluation of sludge anaerobic fermentation driving partial denitrification capability: In view of kinetics and metagenomic mechanisms

Partial denitrification (PD) provides a promising approach of efficient and stable nitrite (NO₂^--N) generation for annamox. In this study, the feasibility of short-term sludge anaerobic fermentation driving PD was evaluated. It was found that a higher NO₂^--N accumulation in nitrate (NO₃^--N) reduction was obtained with the 5-days fermented sludge compared to 8 and 15-days fermentation. Moreover, compared to acetate as carbon source, sludge fermentation products (SFPs) induced the higher NO₂^--N production with nitrate-to-nitrite transformation ratio (NTR) nearly 100 %. Denitrification activity of fermented sludge were obviously improved with SFPs as electron donor. Metagenomic analysis revealed that Thauera was the dominant bacteria, which was assumed to be the key contributor to PD performance by harboring the highest narGHI and napAB but much lower nirS and nirK. Under the conditions of SFPs and fermented sludge, Thauera was speculated to have higher resistance than other denitrifiers attributed to versatile carbon metabolic capabilities utilizing SFPs with the significantly improved genes for metabolism of complex organic carbon via glycolysis after anaerobic fermentation. A novel integration of sludge fermentation driving PD and anammox for mainstream wastewater treatment and sidestream polishing was proposed to offer a promising application with reduced commercial carbon source consumption and waste sludge reduction.

Regulation of denitrification performance and microbial topology by lights: Insight into wavelength effects towards microbiota

The low efficiency of conventional complete denitrification, as well as the unstable nitrite supply for partial-denitrification coupled anammox (PD/A) restrict the efficient removal of nitrogen from industrial wastewaters. Herein, we proposed an optical strategy to bidirectionally regulate denitrification by introducing lights at different wavelengths, and the underlying mechanisms were elucidated accordingly. It turned out that yellow light at wavelength of 590 nm accelerated denitrification by 35.4%, while blue light delayed denitrification with stable nitrite accumulation above 86.9% and high nitrate removal (99.8%). Microbial physiology and viability further supported the positive effects of yellow light on microbial activity. Additionally, despite the sluggish denitrification aroused by blue light, negligible cellular damage was observed. Antioxidant capability divergence, microbial community shifting and metabolic flux redirection contributed to the wavelength-dependent effects. Halomonas and Pseudomonas were identified as high-credit taxonomic biomarkers of yellow and blue light. As revealed by metabolomics, pantothenate and CoA biosynthesis, glutamate metabolism and alkaloid biosynthesis presented high impact values. Co-analysis of metabolomics and metagenomics based on microbial topology further distinguished pivotal metabolic pathways and genes. Oxidative phosphorylation contributed to the divergent denitrification performance through electron transfer chains, whereas glutamate and glutathione metabolism contributed to oxidative stress alleviation and mediated the metabolic flux between peroxisome and nitrogen metabolism. This study shed a light on the application of optical strategy to regulate denitrification performance and achieve either complete denitrification or PD/A.

Extending reaction duration has minor influence on nitrite production in partial-denitrification process

Partial denitrification (PD) is another important pathway producing nitrite for anammox, however, whether its performance is affected by overlong reaction time, a situation that often takes place is still unknown. Three sequencing batch reactors were operated for PD to evaluate this factor on nitrite production. Results indicated effluent nitrite was very close despite reaction time even extending to four times longer than control (i.e., nitrate-to-nitrite transformation ratio (NTR) of 94.4%-89.8%). Meanwhile, it was found PD could recover to the normal after suffering from high organics shocking. Cycle studies suggested produced nitrite would not be further reduced with prolonged time, as indicated by changing trend of pH and alkalinity. Microbial analysis revealed PD functional bacteria, Thauera, slightly decreased with prolonged reaction, while it was always predominated. Taken together, this study indicated overlong reaction time had minor influence on PD, demonstrating its robustness with great technological superiority in supplying nitrite for anammox.

Saline short-term shock and rapid recovery on anammox performance

Anaerobic ammonia oxidation (anammox) is an environmental-friendly biological nitrogen removal process, which has been developed as a promising technology in industrial wastewater treatment. However, anammox nitrogen removal under high saline conditions still faces many challenges. This study investigated the performance of anammox sludge under saline short-term shock and the strategy of rapid recovery. Salinity concentration, saline exposure time, and NaCl/Na₂SO₄ ratio were selected as three critical factors for short-term shock. The activity inhibition of anammox sludge were tested by using response surface methodology (RSM). Our results showed that, compared with the NaCl/Na₂SO₄ ratio, the salinity concentration and saline exposure time were the significant factor causing the anammox inhibition. The addition of glycine betaine (GB) in moderate amounts (0.1-5 mM) was found to help anammox to resist in relative low saline shock intensities (e.g., IC₂₅ and IC₅₀), with the activity retention rate of 94.7%. However, glycine betaine was not worked effectively under relatively high saline shock intensities (e.g., complete inhibition condition). Microbial community analysis revealed that Brocadiaceae accounted for only about 7.6%-13.2% at inhibited conditions. Interestingly, 16S rRNA analysis showed that the abundance of activated Brocadiaceae remarkably decreased with time after high-level saline shock. This tendency was consistent with the results of qPCR targeted hzsA gene. Finally, based on quorum sensing, the anammox activity was recovered to 93.5% of original sludge by adding 30% original sludge. The study realized the rapid recovery of anammox activity under complete inhibition, promoting the development and operation of salt-tolerant anammox process.

Linking Genome-Centric Metagenomics to Kinetic Analysis Reveals the Regulation Mechanism of Hydroxylamine in Nitrite Accumulation of Biological Denitrification

Given hydroxylamine accumulation in various nitrification systems and its potential mechanism in regulating the subsequent denitrification process were unraveled in this study. Hydroxylamine (>0.5 mgN/L) immediately induced nitrite accumulation of activated sludge by inhibiting the activities of nitrite reductases and their electron transport modules (Complex III and cytochrome c). Moreover, long-term exposure to 0.5-2.5 mgN/L hydroxylamine accelerated the functional transformation from denitrification to denitratation under low C/N conditions. However, genome-centric metagenomics indicated that a genotypic complete rather than truncated denitrifier Thauera aminoaromatica TJ127 was enriched and mainly responsible for acetate storage and nitrate reduction of the denitratation community. Interestingly, its enrichment resulted in nitrite production and reduction sequentially but reduced nitrate only to nitrite under carbon-limited conditions (C/N ≤ 3.0). Thus, it showed higher tolerance to hydroxylamine than the concurrent phenotype denitrifiers in activated sludge. Moreover, due to its higher anoxic storage capability in the feast phase, this enrichment became highly specialized by decreasing the feast/famine ratio, and thus a satisfactory denitratation performance was still maintained without hydroxylamine. These results suggested that the transient release of hydroxylamine from nitrification may interfere with subsequent denitrification metabolism, but its continuous accumulation is beneficial for achieving denitratation, which could steadily provide nitrite for mainstream anammox.

Halophilic Martelella sp. AD-3 enhanced phenanthrene degradation in a bioaugmented activated sludge system through syntrophic interaction

Polycyclic aromatic hydrocarbons (PAHs) are a group of common recalcitrant pollutant in industrial saline wastewater that raised significant concerns, whereas traditional activated sludge (AS) has limited tolerance to high salinity and PAHs toxicity, restricting its capacity to degrade PAHs. It is therefore urgent to develop a bioaugmented sludge (BS) system to aid in the effective degradation of these types of compounds under saline condition. In this study, a novel bioaugmentation strategy was developed by using halophilic Martelella sp. AD-3 for effectively augmented phenanthrene (PHE) degradation under 3% salinity. It was found that a 0.5∼1.5% (w/w) ratio of strain AD-3 to activated sludge was optimal for achieving high PHE degradation activity of the BS system with degradation rates reaching 2.2 mg⋅gVSS^-1⋅h^-1, nearly 25 times that of the AS system. Although 1-hydroxy-2-naphthoic acid (1H2N) was accumulated obviously, the mineralization of PHE was more complete in the BS system. Reads-based metagenomic coupled metatranscriptomic analysis revealed that the expression values of ndoB, encoding a dioxygenase associated with PHE ring-cleavage, was 5600-fold higher in the BS system than in the AS system. Metagenome assembly showed the members of the Corynebacterium and Alcaligenes genera were abundant in the strain AD-3 bioaugmented BS system with expression of 10.3±1.8% and 1.9±0.26%, respectively. Moreover, phdI and nahG accused for metabolism of 1H2N have been annotated in both above two genera. Degradation assays of intermediates of PHE confirmed that the activated sludge actually possessed considerable degradation capacity for downstream intermediates of PHE including 1H2N. The degradation capacity ratio of 1H2N to PHE was 87% in BS system, while it was 26% in strain AD-3. These results indicated that strain AD-3 contributed mainly in transforming PHE to 1H2N in BS system, while species in activated sludge utilized 1H2N as substrate to grow, thus establishing a syntrophic interaction with strain AD-3 and achieving the complete mineralization of PHE. Long-term continuous experiment confirmed a stable PHE removal efficiency of 93% and few 1H2N accumulation in BS SBR system. This study demonstrated an effective bioaugmented strategy for the bioremediation of saline wastewater containing PAHs.

Synergistic Inorganic Carbon and Denitrification Genes Contributed to Nitrite Accumulation in a Hydrogen-Based Membrane Biofilm Reactor

Partial denitrification, the termination of NO3−-N reduction at nitrite (NO2−-N), has received growing interest for treating wastewaters with high ammonium concentrations, because it can be coupled to anammox for total-nitrogen removal. NO2− accumulation in the hydrogen (H2)-based membrane biofilm reactor (MBfR) has rarely been studied, and the mechanisms behind its accumulation have not been defined. This study aimed at achieving the partial denitrification with H2-based autotrophic reducing bacteria in a MBfR. Results showed that by increasing the NO3− loading, increasing the pH, and decreasing the inorganic-carbon concentration, a nitrite transformation rate higher than 68% was achieved. Community analysis indicated that Thauera and Azoarcus became the dominant genera when partial denitrification was occurring. Functional genes abundances proved that partial denitrification to accumulate NO2− was correlated to increases of gene for the form I RuBisCo enzyme (cbbL). This study confirmed the feasibility of autotrophic partial denitrification formed in the MBfR, and revealed the inorganic carbon mechanism in MBfR denitrification.

Insight into halotolerance of a robust heterotrophic nitrifying and aerobic denitrifying bacterium Halomonas salifodinae

Studies toward biotreating hypersaline wastewater containing different salts and halotolerant mechanism of robust strains are important but still rare. Here an isolated bacterium Halomonas salifodinae can perform simultaneous nitrification and denitrification (SND) at 15% salinity, showing high nitrogen removal efficiencies of over 98% via response surface methodology optimization. Besides NaCl, this robust strain had high resistance to other salts (KCl, Na₂SO₄, and K₂SO₄) and can efficiently remove nitrogen in saline wastewater containing heavy metals such as Fe(II), Mn(II), Zn(II), Cr(VI), Ni(II), and Cu(II). After repeated-batch culturing at different salinities, the treated strains with different halotolerant capabilities were used as single strain model to study halotolerant mechanism via metabolic analysis. The halotolerant bacterium can convert D-proline and glutamic acid to glutamine as well as lactulose to trehalose. The accumulated intracellular compatible solutes can resist high osmotic pressure and bound water molecule in hypersaline wastewater to accomplish high-efficiency SND processes.

Culturing partial denitrification biofilm in side stream incubator with ordinary activated sludge as inoculum: One step closer to mainstream Anammox upgrade

Recently, adding carriers into anoxic zone is proposed for mainstream Anammox upgrade, which relied on the denitrifiers responsible for partial denitrification (PD) to generate essential nitrite for Anammox bacteria. Still, their low abundance in the naturally formed biofilm leads to insufficient nitrite supply. This study investigated the sequential culturing of PD biofilm. By inoculating ordinary activated sludge, the PD process was quickly established within 54-day. During that, decreasing carbon to nitrogen ratio and anoxic duration in order might be effective strategies. Adding carriers shifted the microbial community, especially the proliferation of Flavobacterium. When solely using the mature PD biofilm, high nitrate to nitrite transformation ratio (>70%) was obtained. Meanwhile, both nitrate-reducing and nitrite-generating processes slowed down and lasted ∼90 min. In addition, abundant Simplicispira candidate for PD was detected in biofilm. This study also suggests that regularly harvesting PD-related functional bacteria from a side-stream incubator promotes mainstream Anammox upgrade.

The anammox coupled partial-denitrification process in an integrated granular sludge and fixed-biofilm reactor developed for mainstream wastewater treatment: Performance and community structure

This study describes an integrated granular sludge and fixed-biofilm (iGB) reactor innovatively designed to carry out the anammox/partial-denitrification (A/PD) process for nitrogen removal with mainstream municipal wastewater. The iGB-A/PD reactor consists of anammox granules inoculated in the lower region of reactor and an acclimated fixed-biofilm positioned in the upper region. Compared to the other reported A/PD systems for mainstream wastewater treatment, this iGB-A/PD reactor is notable due to its higher quality effluent with a total inorganic nitrogen (TIN) of ∼3 mg•L^-1 and operation at a high nitrogen removal rate (NRR) of 0.8 ± 0.1 kg-N•m^-3•d^-1. Reads-based metatranscriptomic analysis found that the expression values of hzsA and hdh, key genes associated with anammox, were much higher than other functional genes on nitrogen conversion, confirming the major roles of the anammox bacteria in nitrogen bio-removal. In both regions of the reactor, the nitrate reduction genes (napA/narG) had expression values of 56-99 RPM, which were similar to that of the nitrite reduction genes (nirS/nirK). The expression reads from genes for dissimilatory nitrate reduction to ammonium (DNRA), nrfA and nirB, were unexpectedly high, and were over the half of the levels of reads from genes required for nitrate reduction. Kinetic assays confirmed that the granules had an anammox activity of 16.2 g-NH₄⁺-N•kg^-1-VSS•d^-1 and a nitrate reduction activity of 4.1 g-N•kg^-1-VSS•d^-1. While these values were changed to be 4.9 g- NH₄⁺-N•kg^-1-VSS•d^-1and 4.3 g-N•kg^-1-VSS•d^-1 respectively in the fixed-biofilm. Mass flux determination found that PD and DNRA was responsible for ∼50% and ∼25% of nitrate reduction, respectively, in the whole reactor, consistent with high effluent quality and treatment efficiency via a nitrite loop. Metagenomic binning analysis revealed that new and unidentified anammox species, affiliated with Candidatus Brocadia, were the dominant anammox organisms. Myxococcota and Planctomycetota were the principal organisms associated with the PD and DNRA processes, respectively.

Effective partial denitrification of biological effluent of landfill leachate for Anammox process: Start-up, influencing factors and stable operation

Partial denitrification combined with Anammox is a promising approach for simultaneous removal of ammonium and nitrate from wastewaters. In this study, the start-up, influencing factors and stable operation of partial denitrification for treating biological effluent from landfill leachate were investigated. High nitrate loads (3.85 kg N m^-3 d^-1) and short hydraulic retention time (0.66 h) were obtained in the partial denitrification process, yielding a suitable ratio of NO₂^--N/NH₄⁺-N in the effluent for downstream Anammox process. The study also revealed the importance of carbon sources, COD/NO₃^--N ratio and salinity in the partial denitrification. Acetate-type carbon source, COD/NO₃^--N ratio of about 3.0 and salinity lower than 1% favored high-efficient partial denitrification. The endogenous carbon sources from high-rate partial denitrification sludge contributed to low COD consumption in the process. During the partial denitrification, the dominant genus of Thauera was enriched, and shifted to Pseudomonas with the increase of organic removal rates.

Applicability of two-stage anoxic/oxic shortcut nitrogen removal via partial nitrification and partial denitrification for municipal wastewater by adding sludge fermentation products continuously

Partial nitrification and partial denitrification combined with anammox is a promising process for sewage treatment. In this study, real municipal wastewater was treated in a continuous two-stage anoxic/oxic (A/O) reactor. External mixed sludge fermentation products were added in the anoxic zone, simultaneously achieving partial nitrification and partial denitrification and achieving a high and relatively stable accumulation of nitrite. The maximum accumulation rates of NO₂^--N in A1.2 and A2.1-A2.4 zones of the reactor reached 70% and 61%-37%, respectively, which improved denitrification efficiency and created conditions that supported the coupling of subsequent anammox. The influent nitrogen load of the system was 0.078 kg/(m³•d), and the mean influent and effluent total nitrogen were 51 and 12 mg/L, respectively. The mean total nitrogen removal rate reached 76%. Further analysis revealed that Hyphomicrobium (incomplete denitrifiers) and Nitrosomonas (ammonia oxidizing bacteria) were enriched, which may have facilitated the high nitrite accumulation. Moreover, the batch test showed that adding sludge fermentation during denitrification significantly suppressed nitrite reduction, resulting in the nitrite accumulation.

Adaptation and evolution of freshwater Anammox communities treating saline/brackish wastewater

The most common way to apply Anammox for saline wastewater treatment is via salt adaptation of freshwater Anammox bacteria (FAB). To better apply this process in practice, it's essential to understand the salt adaptation process of FBA, as well as the underlying mechanisms. This study investigated the long-term salt adaptation process of a fixed-film FAB culture in three reactors (namely R1-R3), under salinities of 2, 8, and 12 NaCl g/L, correspondingly. All three reactors were under stable operation and achieved 80-90% total inorganic nitrogen removal efficiency throughout the 425-day operation period. R1 servers as a blank control, based on the clear microbial community shifts in R2 and R3, the operation period was divided into 2 phases. During Phase 1, all FAB in the three reactors belonged to Ca. Brocadia sp.. The Anammox activity (AA) and the ratio of nitrite/ammonium (NO₂^--N/NH₄⁺-N) consumption in R2 and R3 decreased with the increase of salinity and did not recover to the initial levels. During Phase 2, the relative abundance of Ca. Kuenenia sp. in R2 and R3 increased from nearly 0 to about 60 and 77%, respectively. With the growth of Ca. Kuenenia sp., the AA and stoichiometry of R2 and R3 gradually recovered. AA of R2 and R3 both reached 1.0 g NH₄⁺-N/L/day at the end of this phase, which was about 80% of that in R1. These results indicated that the salt adaptation of FAB culture was achieved by species shift from a low salt-tolerance one to a high salt-tolerance one.

Simultaneous nitrification and denitrification of hypersaline wastewater by a robust bacterium Halomonas salifodinae from a repeated-batch acclimation

Biotreatment of hypersaline wastewater requires robust strains with high resistance to activity inhibition and even bacterium death, which remains a worldwide challenge. Here Halomonas salifodinae, a simultaneous nitrification and denitrification (SND) bacterium, was isolated by performing repeated-batch acclimation, showing efficient nitrogen removal at 0-15% salinity and low activity inhibition prominently superior to that of other strains such as Pseudomonas sp. and Acinetobacter sp. Community analysis as well as comparison of microbial activity at different salinities revealed an increased relative abundance of halotolerant populations by stimulating their salt tolerance during the repeated-batch process. For single or mixed nitrogen sources at 15% salinity, the SND efficiencies of the isolated strain reached above 95%. The high activities were attributed to the key enzymes AMO and HAO for nitrification as well as NAP and NIR for denitrification. The findings provide a promising acclimation pathway to obtain robust bacteria for biotreatment of hypersaline wastewater.

Rapid start-up strategy of partial denitrification and microbially driven mechanism of nitrite accumulation mediated by dissolved organic matter

The rapid start-up of Partial denitrification (PD; nitrate to nitrite) was investigated based on the analysis of microbially driven mechanism of nitrite accumulation mediated by Dissolved organic matter (DOM) in this study. The nitrate to Nitrite transformation ratio (NTR) > 90% and effluent nitrate < 5 mg/L were achieved in 17 days by feeding with lower nitrate of ~ 35 mg/L and removing the idling period. And the enhanced nitrite accumulation when applying the above strategy is related to the decreased utilization of the aliphatic DOM during nitrite reduction process. Additionally, the rapid enriched Thauera and OLB13 (37.21%) and inhibited norank_f__Blastocatellaceae (2.86%), and the increased disparity (2.0-fold) between the genes involved in nitrite generation (e.g., narH) and for nitrite reduction (e.g., nirK) jointly contributed to PD start-up. While the genes (e.g., DLD) related to producing electrons from aliphatic DOM also up-regulated by 0.1-fold, which led to the increased nitrate removal and NTR.

Metagenomics and metatranscriptomics uncover the microbial community associated with high S0 production in a denitrifying desulfurization granular sludge reactor

The denitrification desulfurization process is a promising technology for elemental sulfur (S⁰) production from sulfide containing wastewater. However, the microbial community associated with high S⁰ production still is not well studied. This study describes an efficient denitrification S⁰ production bioreactor based on inoculation with anaerobic granular sludge. At an optimal S/N molar ratio of 7:2, 80 % of the influent sulfide was transformed to high quality elemental sulfur with a purity of 92.5% while the total inorganic nitrogen removal efficiency was stable at ∼80%. Metatranscriptomic analysis found that community expression of the gene encoding the sulfide-quinone reductase (SQR) was 10-fold greater than that of the flavocytochrome-c sulfide dehydrogenase subunit B (fccB). Moreover, the expression level of SQR was also significantly higher than the Dsr gene encoding for dissimilatory sulfate reductase, which encodes a critical S⁰ oxidation enzyme. Metagenomic binning analysis confirmed that sulfide-oxidizing bacteria (SOB) utilizing SQR were common in the community and most likely accounted for high S⁰ production. An unexpected enrichment in methanogens and high expression activity of bacteria carrying out Stickland fermentation as well as in other bacteria with reduced genomes indicated a complex community supporting stable sulfide oxidation to S⁰, likely aiding in performance stability. This study establishes this treatment approach as an alternative biotechnology for sulfide containing wastewater treatment and sheds light on the microbial interactions associated with high S⁰ production.

Performance and granular characteristics of salt-tolerant aerobic granular reactors response to multiple hypersaline wastewater

Aerobic granular sludge (AGS) technology has been recognized as a promising alternative to alleviate the osmotic stress of hypersaline wastewater. However, the response of AGS process to composite hypersaline wastewater on removal performance and populations was yet to be understood. In this work, two sequenced batch reactors were operated in parallel in absence (R0) and presence (R1) of high concentration sulfate as proxy for single and mixed salts (30 g salt·L^-1) respectively. Results demonstrated that the presence of sulfate in hypersaline wastewater enhanced chemical oxygen demand (COD) and total nitrogen (TN) removals of 95.3% and 65.5% respectively with lower accumulations of nitrite. High-throughput 16 S rRNA gene sequencing technique elucidated that Denitromonas (31.6%) and Xanthomarina (17.0%) were the more dominant genera in AGS response to mixed salts with high sulfate and laid the biological basis for strengthening removal performance. The enrichment of halophilic Luteococcus (23.5%) in the AGS surface indicated the potential role of mixed salts in shaping the physical properties and surface population structure of AGS. Our work could facilitate the potential applications of AGS technology for industrial hypersaline wastewater treatment with complicated compositions.

Simultaneous carbon reutilization for primary sludge and stable nitrite production in a hydrolytic acidification coupled with partial denitrification system to treat nitrate contaminant

Partial denitrification (PD, nitrate → nitrite) is a promising process for the hazardous nitrate removal by producing nitrite for Anammox. In this study, the startup and performance of PD using slowly biodegradable organic matter in primary sludge was explored by combining with in-situ hydrolytic acidification (HA). Results showed that efficient PD was established with 61.3% nitrite production at an influent nitrate level of 50 mg/L, with a simultaneous 23.1% reduction in volatile sludge mass. Efficient electron donors including acetate (13.2%), dissolved saccharide (11.9%), and intracellular poly-hydroxyalkanoates (22.5%) were generated from sludge HA, jointly promoting desirable nitrite production. Microbial analysis revealed that adding primary sludge significantly increased community diversity; however, the specific genera Dechloromonas (11.9%) and Thauera (10.5%) remained stably enriched to facilitate the efficient sludge reduction and nitrite production. These findings provide a novel strategy for simultaneously treating primary sludge, nitrate contaminant, and domestic wastewater using a HAPD and Anammox process.

Genome-based analysis to understanding rapid resuscitation of cryopreserved anammox consortia via sequential supernatant addition

Simple cryopreservation of anaerobic ammonium-oxidation (anammox) consortia has become a promising preservation technology for the fast start-up of the anammox process. Here, we use genome-resolved metagenomics and metatranscriptomics to understand of the microbial interaction in a simple and effective resuscitation process for long-term cryopreserved anammox consortia by sequential addition of anammox SBR supernatant. Performance results showed that sequential addition of anammox supernatant significantly reduced the resuscitation time of the granule-based anammox process from 40 to 20 days. Genome-centric metagenomics were used to recover 19 high-quality draft genomes of anammox and heterotrophic bacteria. Comparative metatranscriptomic analysis was conducted to examine the gene expression of Candidatus Kuenenia stuttgartiensis, the dominant anammox bacterium, and heterotrophic bacteria to better understand their potential interactions. Proteobacteria-affiliated bacteria found in the supernatant were highly active in producing the secondary metabolites molybdopterin cofactor and folate which are needed for growth of the auxotrophic anammox bacteria. In addition, the significantly higher expression levels of hzsA and CO₂-fixtion genes in the Candidatus Kuenenia genome indicated the anammox bacteria were likely more active and growing faster after sequential anammox supernatant addition during the resuscitation process. The resuscitation treatment pulse assays confirmed that sequential addition of supernatant was an effective way for the rapid resuscitation of anammox consortia. Our findings offer the first evidence of cross-feeding during the rapid resuscitation of cryopreserved anammox consortia.

Comparative Metagenomic and Metatranscriptomic Analyses Reveal the Functional Species and Metabolic Characteristics of an Enriched Denitratation Community

Nitrite supply for mainstream anammox via denitratation has attracted increasing attention. The functional species responsible for denitratation and their metabolic characteristics were unravelled in this study. A highly stable denitratation community was enriched from activated sludge by combined control of C/N and pH. Nitrite accumulation and nitrate removal efficiencies were both higher than 80% during long-term operation (>100 d). The genotypic complete denitrifier Thauera aminoaromatica MZ1T was identified to be mainly responsible for acetate consumption, polyhydroxybutyrate (PHB) accumulation, and nitrate reduction. The presence of nitrate restricted the transcription and electron allocation of downstream denitrifying enzymes due to low expression of their electron transport modules (cytochrome bc1 and cytochrome c). Metabolic reconstruction of this strain indicated that the reducing power generated via the tricarboxylic acid (TCA) cycle was mainly provided for PHB synthesis and nitrate reduction in the exogenous feast phase. After the depletion of acetate, PHB was degraded and then entered the TCA cycle, providing reducing power for nitrate reduction. This allocation strategy of reducing power with priority given to carbon storage instead of nitrite reduction might favor their survival in oligotrophic and weak alkaline habitats. These results updated our understanding of the causes underlying nitrite accumulation and its physiological benefits.

Flocs are the main source of nitrous oxide in a high-rate anammox granular sludge reactor: insights from metagenomics and fed-batch experiments

Nitrous oxide (N₂O) emissions from anammox-based processes are well documented but insight into source of the N₂O emission in high-rate anammox granular sludge reactors (AGSR) is limited. In this study, metagenomics and fed-batch experiments were applied to investigate the relative contributions of anammox granules and flocs to N₂O production in a high-rate AGSR. Flocs, which constitute only ~10% of total biomass contributed about 60% of the total N₂O production. Granules, the main contributor of nitrogen removal (~95%), were responsible for the remaining ~40% of N₂O production. This result is inconsistent with reads-based analysis that found the gene encoding clade II type nitrous oxide reductase (nosZ_II) had similar abundances in both granules and flocs. Another notable trend observed was the relatively higher abundance of the gene for NO-producing nitrite reductase (nir) in comparison to the gene for the nitric oxide reductase gene (nor) in both granules and flocs, indicating nitric oxide (NO) may accumulate in the AGSR. This is significant since NO and N₂O pulse assays demonstrated that NO could lead to N₂O production from both granules and flocs. However, since anammox bacteria, which were shown to be in higher abundance in granules than in flocs, have the capacity to scavenge NO this provides a mechanism by which its inhibitory effects can be mitigated, limiting N₂O release from the granules, consistent with experimental observation. These results demonstrate flocs are the main source of N₂O emission in AGSR and provide lab-scale evidence that NO-dependent anammox can mitigate N₂O emission.

Fast start-up of PN/A process in a single-stage packed bed and mechanism of nitrogen removal

The single-stage partial nitritation-anammox (PN/A) process is severely limited by a long start-up time and unstable removal efficiency. In this study, PN/A was developed in 67 days in a novel packed bed equipped with porous bio-carriers by gradually increasing the influent nitrogen loading rate (0.15-0.73 kg-N m^-3·d^-1) and controlling the dissolved oxygen (< 1.2 mg L^-1). An average ammonium nitrogen removal efficiency (ARE) and total nitrogen removal efficiency (TNR) of 87.01 and 72.41%, respectively, were obtained. This represents a reliable alternative method of achieving rapid PN/A start-up. The results of 16S rRNA sequencing showed that Proteobacteria and Planctomycetes, with which ammonia-oxidizing bacteria and anammox bacteria were affiliated, accounted for 38.8%, representing the dominant phylum in the system after acclimation. The abundance of Nitrosomonas and Candidatus Brocadia increased by 16 and 1.79%, respectively. The results of metagenomics and metatranscriptomics revealed that the nitrite oxidation process was blocked by the transcriptional suppression of nitrite oxidoreductase and the entire nitrogen metabolism process was dominated by the partial nitritation and anammox process. Moreover, a high abundance of heterotrophic bacteria with potential for nitrogen removal was detected. In the nitrogen cycle, a widespread nitrite-accumulated denitrification helps to form a nitrite loop, which promotes the efficiency of total nitrogen removal. This is crucial for further improving the nitrogen removal mechanism in the PN/A system.

Successful establishment of partial denitrification by introducing hydrolytic acidification of slowly biodegradable organic matter

Partial denitrification (PD, nitrate → nitrite) was successfully established in this study by introducing hydrolytic acidification (HA) of slowly biodegradable organic matter (SBOM). A high selectivity for the nitrate over nitrite as electron acceptors was obtained during a 178-day long-term operation, with the nitrate to nitrite transformation ratio climbing to 81.3% at an influent SBOM of 286 mg/L and low-strength nitrate of 40 mg/L. Acetate (33.9%) and dissolved saccharide (19.3%), as the major SBOM HA products, indeed facilitated high-efficiency nitrite production by serving as favorable electron donors. This was well explained by the metagenomic analysis that the dominant Dechloromonas and Thauera denitrifying genera, which hold 3.9 times higher abundance of nitrate reductase than nitrite reductase, also played a key role in carbon glycolysis and acidification. This study provides new insight into PD development in multiple types of wastewater for the versatile carbon/nitrogen metabolism of functional bacteria.

Achieving efficient nitrite accumulation in glycerol-driven partial denitrification system: Insights of influencing factors, shift of microbial community and metabolic function

Partial denitrification (PD), which could provide sufficient nitrite for subsequent anaerobic ammonium oxidation, is a novel strategy for mainstream nitrogen removal. In this study, the performance of using glycerol as electron donor for nitrite accumulation in PD process was evaluated. Results showed that a C/N of 4.5 was effective for nitrite production (average nitrite accumulation rate: 34.32 mg N h^-1 gMLVSS^-1; average nitrate-to-nitrite transformation ratio (NTR): 91.1%) with pH ranging from 6.0 to 9.0. Also, a stable nitrite accumulation was achieved in long-term operation with the average NTR of 80.1%. Mechanism investigation found that the denitrifying bacteria Saccharibacteria (77.9%) was enriched in glycerol-driven reactors. Moreover, the enzymatic activity as well as the encoding genes (i.e. narG, narH and napA) involved in nitrate reduction were much higher than that for nitrite reduction (i.e. nirK), and this disparity was responsible for the efficient nitrite accumulation in glycerol-driven PD system.

Application of acidic conditions and inert-gas sparging to achieve high-efficiency nitrous oxide recovery during nitrite denitrification

Nitrogen removal with energy recovery through denitrification dependent N₂O production is garnering recent attention due to its cost advantages. The most effective current method requires alternating COD and nitrite to achieve high N₂O production making it incompatible with typical wastewaters and consequently difficult to use in most settings. The work described here introduces a robust and highly efficient N₂O recovery approach which has the potential to work with wastewaters containing COD and nitrite simultaneously. This method relies on low pH incubation and inert gas sparging (IGS) to shift a community of mainly N₂ producing nitrite denitrifiers to a community that accumulates N₂O when incubated in the absence of IGS. Before experiencing IGS, samples from activated sludge incubated at a pH of 4.5 and 6.0 only achieved a maximum N₂O production efficiency (PE_N₂O) of ∼26%. After IGS the PE_N₂O values increased to ∼97.5% and ∼80.2% for samples from these same pH 4.5 and pH 6.0 reactors, respectively. IGS did not lead to N₂O production in a pH 7.5 bioreactor. Meta-omics analysis revealed that IGS resulted in an increase in bacteria utilizing the clade I nitrous oxide reductase (nosZ_I) relative to bacteria utilizing the clade II nitrous oxide reductase (nosZ_II). This likely results from IGS flushing out N₂O leaving nitrite as the principal nitrogen oxide available for respiration, favoring nosZ_I utilizing bacteria which are more likely to be complete denitrifiers. Metatranscriptomic analysis suggested that the high PE_N₂O values that occurred after stopping IGS result from the NO generated by chemodenitrification accumulating to levels that inactivate [4Fe:4S] clusters in the NosR protein essential for N₂O reduction in the nosZ_I denitrifiers. This study provides an efficient and straightforward method for N₂O recovery, widening the options for energy recovery from nitrogen-based wastes.

Bacteriophage-mediated extracellular DNA release is important for the structural stability of aerobic granular sludge

The aim of this study was to investigate the microbial characteristics and the structural role of exDNA in different size AGSs. Metagenomic results showed that exDNA has a significantly lower GC content, ~46.0%, than the ~65.0% GC of intracellular DNA (inDNA). Taxonomic predictions showed most of the reads from the exDNA that could be taxonomically assigned were from members of the phyla Bacteroidetes (55.0-64.2% of the total exDNA reads). Assigned inDNA reads were mainly from Proteobacteria (50.9-57.8%) or Actinobacteria (18.0-28.0%). Reads mapping showed that exDNA read depths were similar across all predicted open reading frames from assembled genomes that were assigned as Bacteroidetes which is consistent with cell lysis as a source of exDNA. Enrichment of CRISPR-CAS proteins in exDNA reads and CRISPR spacers in Bacteroidetes associated draft genomes suggested that bacteriophage infection may be an important cause of lysis of these cells. A critical role for this exDNA was found using DNase I digestion experiments which showed that the exDNA was vital for the structural stability of relatively small sized AGS but not for the larger sized AGS. The characteristics of exDNA in AGSs revealed in this work provide a new perspective on AGS components and structural stability.

Recovering partial nitritation in a PN/A system during mainstream wastewater treatment by reviving AOB activity after thoroughly inhibiting AOB and NOB with free nitrous acid

Starting up or recovering partial nitritation is a major challenge for achieving or maintaining stable partial nitritation/anammox (PN/A) during mainstream wastewater treatment. This study presents a novel strategy for recovering the nitrite pathway by selectively reviving ammonium oxidizing bacteria (AOB) after thoroughly inhibiting AOB and nitrite oxidizing bacteria (NOB) using free nitrous acid (FNA). A sequencing batch reactor was operated for PN/A to treat real domestic wastewater for 423 days, during which twice FNA treatment was temporarily implemented. Results showed that with a single 0.45 mg/L FNA treatment on flocculent sludge, the NO₃^--N concentration during the aerobic period showed an uptrend again and the partial nitritation performance was deteriorated. In contrast, 1.35 mg/L FNA treatment induced the inhibition of both AOB and NOB leading to regressive ammonium oxidation, but a subsequently higher DO (1.5 mg/L) and longer aeration duration recovered partial nitritation. For the relative abundances of the acquired biomass related to nitrogen conversion, Nitrosomonas, Nitrospira and Nitrolancea increased to 9.65%, 10.27% and 4.35%, respectively, at the beginning of the 1.35 mg/L FNA treatment, and Nitrospira and Nitrolancea decreased to 2.80% and 0.03% whereas Nitrosomonas declined to 8.71% after 76 days. Ca. Brocadia showed less resilience after the 1.35 mg/L FNA treatment, with the relative abundance decreasing from 13.38% to 0.62% due to insufficient nitrite. Molecular ecological network analysis indicates that among anammox taxa, Ca. Kuenenia and Ca. Brocadia formed important links with other N cycle processes. Moreover, the proposed strategy shows operational flexibility because it can be easily used to control NOB in mainstream PN/A applications offered by flocculent sludge systems.

Achieving partial denitrification-anammox in biofilter for advanced wastewater treatment

Recently, partial denitrification (PDN) - anaerobic ammonium oxidation (anammox) process has been widely studied in activated sludge for nitrate wastewater treatment. However, achieving PDN-Anammox in biofilter for domestic wastewater treatment was never reported. In this study, two lab-scale PDN biofilter and Anammox biofilter were built up to treat simulated domestic wastewater. The results showed that stable nitrogen removal performance was kept with averaged effluent nitrogen of 10.2 mg/L. Stable nitrite accumulation performance was achieved with low abundance of nitrite reductase gene, while influent composition influenced nitrogen transformation pathway in PDN biofilter. When treating domestic wastewater, nitrification and partial denitrification led to the higher nitrite accumulation ratio of 75.4%. The percentage contribution of anammox biofilter was 74.6% for nitrogen removal, and Candidatus Brocadia was dominant genus. After long-term operation, limited substrate concentration caused interspecific competition among various anammox bacteria, leading to an increasing proportion of Candidatus Brocadia fulgida. PDN-Anammox biofilter is a feasible process to advanced wastewater treatment, which could save aeration consumption and carbon source addition, and reduce sludge production.

Metagenomics revealed the phase-related characteristics during rapid development of halotolerant aerobic granular sludge

Efforts to produce aerobic granular sludge (AGS) for high-efficient and stable nutrient removal in high saline wastewaters have gained much attention recently. This study was undertaken to describe the phase-related characteristics of the rapid formation of glucose-fed salt-tolerant AGS (SAGS) generated from common municipal activated sludge using metagenomic approaches. The time needed for SAGS formation is about 11 days in a multi-ion matrix salinity of 3%. There were three distinct developmental phases during sludge maturation which were designated: I) the salinity adaptation phase (days 1-2), II) the particle-size transition phase (days 3-5) and III) the maturation and steady-state phase (days 6-11), respectively. Genome-based analysis revealed that during the phase I, members of the genus Mangrovibacter, which has the potential to secrete extracellular polymeric substances (EPS), dominated during the formation of initial SAGS aggregates. During phase II, fungi of the class Saccharomycetes, in particular the genus Geotrichum, became dominant and provided a matrix for bacterial attachment. This mutualistic interaction supported the rapid development and maintenance of mature SAGS. This work characterizes a robust approach for the rapid development of SAGS for efficient saline sewage treatment and provides unique insight into the granulation mechanism occurring during the development process.

A novel SNPR process for advanced nitrogen and phosphorus removal from mainstream wastewater based on anammox, endogenous partial-denitrification and denitrifying dephosphatation

For achieving energy-efficient wastewater treatment, a novel simultaneous nitrogen and phosphorus removal (SNPR) process, which integrated anammox, endogenous partial-denitrification and denitrifying dephosphatation in a sequencing batch reactor with granular sludge was developed to treat mainstream wastewater. After 200 days of operation, a simultaneous high-level nitrogen and phosphorus removal of 93.9% and 94.2%, respectively was achieved with an average influent C/N ratio of 2.9. Anammox pathway contributed 82.9% of the overall nitrogen removal because of the stable nitrite production from nitrate via endogenous partial-denitrification. In addition, phosphorus was mainly removed via denitrifying dephosphatation utilizing nitrate as the electron acceptor, resulting in a significant saving of carbon sources and oxygen demands. Further, adsorption/precipitation of phosphorus occurred in this novel SNPR process, which displaced the energy source to the metabolism of glycogen accumulating organisms (GAOs) for nitrite production and alleviated competition between phosphorus accumulating organisms (PAOs) and anammox for electron acceptor. Using 16S rRNA gene amplicon sequencing analysis, the study found that anammox bacteria (8.4%), GAOs (1.5%) and PAOs (1.1%) co-existed in this system, potentially resulting in simultaneous endogenous partial-denitrification, anammox and denitrifying dephosphatation. The above results demonstrated that the novel SNPR process is a promising technique for energy-efficient wastewater treatment.

Efficient partial-denitrification/anammox (PD/A) process through gas-mixing strategy: System evaluation and microbial analysis

Partial denitrification (PD, NO₃^--N → NO₂^--N) provides a promising opportunity for anammox application in wastewater nitrogen removal. In this study, a continuous-flow PD/Anammox (PD/A) process operated with a novel gas mixing was reported in an up-flow anaerobic bed reactor. A high nitrogen removal rate of 2.42 kgN/(m³∙d) was achieved at a relatively short hydraulic retention time (HRT) of 0.5 h with both influent NH₄⁺-N and NO₃^--N of 30 mg/L. Sludge floatation was eliminated by mixing with gas of the reactor due to an efficiently improved mass transfer. Further optimization of gas flowrates at high NLR could avoid the overproduction of tight-bound extracellular polymeric substances (TB-EPS) and benefit sludge stability. Functional microorganisms of PD and anammox were effectively retained, and Zoogloea affecting sludge settleability kept increasing throughout the operation. This study clearly demonstrated the effectiveness of gas mixing strategy for a high-rate continuous-flow PD/A process with stable nitrogen removal performance.

Metagenomics reveals microbial community differences lead to differential nitrate production in anammox reactors with differing nitrogen loading rates

Nitrate production during anammox can decrease total nitrogen removal efficiency, which will negatively impact its usefulness for the removal of nitrogen from waste streams. However, neither the performance characteristics nor physiological shifts associated with nitrate accumulation in anammox reactors under different nitrogen loading rates (NLRs) is well understood. Consequently, these parameters were studied in a lower NLR anammox reactor, termed R1, producing higher than expected levels of nitrate and compared with a higher NLR reactor, termed R2, showing no excess nitrate production. While both reactors showed high NH₄⁺-N removal efficiencies (>90%), the total nitrogen removal efficiency (<60%) was much lower in R1 due to higher nitrate production. Metagenomic analysis found that the number of reads derived from anammox bacteria were significantly higher in R2. Another notable trend in reads occurrence was the relatively higher levels of reads from genes predicted to be nitrite oxidoreductases (nxr) in R1. Binning yielded 27 high quality draft genomes from the two reactors. Analysis of bin occurrence found that R1 showing both a decrease in anammox bacteria and an unexpected increase in nxr. In-situ assays confirmed that R1 had higher rates of nitrite oxidation to nitrate and suggested that it was not solely due to obligate NOB, but other nxr-containing bacteria are important contributors as well. Our results demonstrate that nitrate accumulation can be a serious operational concern for the application of anammox technology to low-strength wastewater treatment and provide insight into the community changes leading to this outcome.

Recent advances in partial denitrification in biological nitrogen removal: From enrichment to application

To maximize energy recovery, carbon capture followed by shortcut nitrogen removal is becoming the most promising route in biological wastewater treatment. As the intermediate of microbial denitrification, nitrite could serve as a substrate for anammox bacteria, while N₂O is a combustion promoter that can increase 37% energy release from CH₄ than O₂. Therefore, the important advances in partial denitrification (PD) that produces nitrite or N₂O as the main product using inorganic or organic electron donors were critically reviewed. Specifically, the enrichment strategies of PD microorganisms were obtained by analyzing the selection pressures, metabolism, physiology, and microbiology of these microorganisms. Furthermore, some prospective and promising processes integrating PD microorganisms and the bottlenecks of current applications were discussed. The obtained knowledge would provide new insights into the upgrading of current WWTPs involving commitment to achieve nitrogen removal from wastewaters more economically and environmentally friendly.

Bacterial community structure and function in soils from tidal freshwater wetlands in a Chinese delta: Potential impacts of salinity and nutrient

Microorganisms in tidal freshwater wetlands affect biogeochemical cycling of nutrients, but the structures and functions of the wetland communities change due to natural and anthropogenic stresses. Soil samples were collected along a 350-m sampling belt in typical tidal freshwater wetlands of Yellow River Delta to investigate nutrient distributions, bacterial community structures and potential metabolic functions under tide and runoff stress by high-throughput sequencing and PICRUSt analysis. The total nitrogen (TN) contents varied greatly while total phosphorous (TP) contents were relatively stable. The bacterial community structures and predicted functions varied along a 350-m sampling belt. Some sulfate-reducing bacteria, nitrifying bacteria, Marmoricola, unclassified_f_Salinisphaeraceae and Oceanococcus exhibited a decreased trend with increasing distances far away from the river bank (B-0m). However, Salinisphaera was more dominant far away from the river bank (B-350m), indicating the stronger tolerance degree under salt stress. Marinobacterium and Marinobacter could be widely detected from B-0m to B-350m, demonstrating that those bacteria could tolerate a broad range of salinity and have its exceptional adaptation capacities. Redundancy analysis (RDA) indicated that nutrient and salinity played an important role in shaping bacterial community composition. NH₄⁺-N and AP were the key factors in explaining the variance of the genus level. Predicted by PICRUSt analysis, nitrogen fixation (NF), nitrogen mineralization (NM), denitrification and dissimilatory nitrate reduction to ammonium (DNRA) might be the dominant processes of nitrogen metabolism and related genes abundance were abundant in tidal freshwater wetland soils. These findings could provide new insights into the prevention and control of potential nutrient pollution in tidal freshwater wetlands under the dual stress of tide and runoff.

Towards mainstream deammonification of municipal wastewater: Partial nitrification-anammox versus partial denitrification-anammox

The mainstream deammonification has been believed as a viable technology for the energy-neutral municipal wastewater treatment, which can be realized through two approaches known as partial nitrification-anammox (PN/AMX) and partial denitrification-anammox (PDN/AMX). However, large-scale applications of these deammonification processes for municipal wastewater treatment have been rarely reported thus far. Given such a situation, this review examined the mainstream PN/AMX and PDN/AMX processes with the focus on their engineering feasibility, economic viability and potential challenges. It was revealed that soluble COD and stable nitrite production were the main challenges for mainstream deammonification. Pre-capture of COD was essential for mitigating the competition between denitrifiers and anammox bacteria on nitrite, while NOB suppression and partial denitrification control to nitrite stage were critical issues for stable nitrite production in PN and PDN processes respectively. Compared to nitrification-denitrification, the unit oxygen demand for nitrogen removal in PN/AMX and PDN/AMX could be reduced by 57.3% and 47.7%, while the sludge production could also be cut off by 83.7% and 66.3% in PN/AMX and PDN/AMX respectively. These clearly showed the greater economic viability and environmental sustainability of PN/AMX against PDN/AMX. Consequently, more effort is needed to improve the engineering feasibility of large-scale mainstream deammonification for municipal wastewater treatment.

Partial denitrification providing nitrite: Opportunities of extending application for anammox

Anaerobic ammonium oxidation (anammox) has been extensively investigated for cost-efficient nitrogen removal from wastewater. However, the major issues of nitrate (NO₃^--N) residue and instability in the current combination of nitritation and anammox process necessitates being addressed efficiently. The recently proposed partial-denitrification (PD), terminating NO₃^--N reduction to nitrite (NO₂^--N), has been regarded as a promising alternative of NO₂^--N supplying for anammox bacteria. Given the engineering practices, the steadily high NO₂^--N production, alleviating organic inhibition, and reducing greenhouse gas of PD process offers a viable and efficient approach for anammox implementation. Moreover, it allows for the extending applications of anammox process due to the NO₃^--N removal availability. Here we comprehensively review the important new outcomes and discuss the emerging applications of PD-based anammox including the process development, mechanism understanding, and future trends. Significant greater stability and enhanced nitrogen removal efficiency have been demonstrated in the novel integrations of PD and anammox process, indicating a broad perspective in dealing with the mainstream municipal sewage, ammonia-rich streams, and industrial NO₃^--N contained wastewater. Furthermore, researches are still needed for the predictable and controllable strategies, along with the detailed microbiological information in future study. Overall, the achievement of PD process provides unique opportunity catalyzing the engineering applications of energy-efficient and environmental-friendly wastewater treatment via anammox technology.

Achieving partial denitrification using carbon sources in domestic wastewater with waste-activated sludge as inoculum

Partial denitrification (PD, nitrate → nitrite) using carbon sources in domestic wastewater with waste-activated sludge as inoculum was firstly achieved in this study. Through controlling influent pH at about 9.0 and anoxic reaction time of 1 h in the start-up, the nitrite (NO₂^--N) production reached as high as 25.2 mg/L, with influent nitrate (NO₃^--N) of about 30 mg/L and chemical oxygen demand (COD) to NO₃^--N ratio of 5.9. Furthermore, PD performance remained stable without pH control during subsequent operations. Efficient NO₂^--N production was closely related to the consumed amount of readily biodegradable COD (Ss) fraction, with optimal Ss/NO₃^--N ratio of about 3.5. Thauera (19.1%), norank_f__Xanthomonadaceae (5.2%), and Thiobacillus (5.0%) were enriched during the 208-day operation, which may be responsible for high NO₂^--N production. These findings provided a novel strategy for promoting mainstream PD/Anammox application, without additional nitrite-accumulating denitrifying sludge and external carbon sources.

Dominance ofCandidatus saccharibacteriain SBRs achieving partial denitrification: effects of sludge acclimating methods on microbial communities and nitrite accumulation

Partial denitrification (NO₃⁻-N → NO₂⁻-N) was combined with anaerobic ammonium oxidation (ANAMMOX) to achieve nitrogen removal with a low C/N ratio and low energy consumption. Three different acclimation conditions, namely, R1 (sequencing batch reactor (SBR) under anoxic conditions), R2 (SBR under alternating anoxic/aerobic conditions), and R3 (SBR under low-intensity aeration), were investigated using glucose as an electron donor to achieve continuous accumulation of nitrite during a 120 d run. Subsequently, the denitrification performance and microbial community structure of the sludge were investigated. The results showed that the acclimatized sludge in reactors R2 and R3 achieved better partial denitrification performance than the sludge in R1 due to the presence of dissolved oxygen as a result of aeration. Notably, the R3 reactor had the optimal conditions for nitrite accumulation. The high-throughput sequencing analysis indicated that the dominant bacteria in R2 and R3 were Candidatus saccharibacteria with a relative abundance of 45.44% and 34.96%, respectively. This was the first time that Candidatus saccharibacteria was reported as the dominant bacteria in denitrifying sludge. The microbial diversity of the R1 reactor was much greater than that of R2 and R3, indicating that a larger proportion of denitrifying bacteria were present in the R2 and R3 reactors. In addition, the batch experiments showed that the higher the initial pH, the higher the nitrite accumulation rate was.

Partial denitrification (NO₃⁻-N → NO₂⁻-N) was combined with anaerobic ammonium oxidation (ANAMMOX) to achieve nitrogen removal with a low C/N ratio and low energy consumption.