1
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Zhou X, Fillon Y, Shi X, Antia F, Zhou X, Lin A. Hydrogen Fluoride Imidazole: A Simple, Efficient, Mild, and Cost-Effective Silyl-Ether Deprotection Reagent. J Org Chem 2024; 89:15793-15807. [PMID: 39432813 DOI: 10.1021/acs.joc.4c01885] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2024]
Abstract
Despite the availability of numerous -OH silyl protection and deprotection methods, the selective cleavage of silyl ethers in highly complex molecules can still be a challenge. In this article, we present results from a full investigation of a novel, efficient, and mild desilylation protocol using HF/imidazole. Imidazole significantly enhances the desilylation reaction efficiency of HF, allowing clean and complete deprotection of TBDPS ethers in substrates containing both acid and base sensitive groups. For example, four- and five-mer oligonucleotides were efficiently deprotected where all other conditions failed. HF/imidazole is also an effective reagent for the deprotection of TIPS and TBDMS ethers. The reagent prepared using commercially available HF and imidazole maintained the same reactivity even after 4 years of storage at 4 °C. Residual reagents and byproducts can be readily removed with a simple workup; consequently, deprotection of TBDPS was successfully implemented in a 2.5 kg scale synthesis of a five-mer oligonucleotide.
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Affiliation(s)
- Xuan Zhou
- Oligonucleotide Process Development, Biogen, Cambridge, Massachusetts 02142, United States
| | - Yannick Fillon
- Oligonucleotide Process Development, Biogen, Cambridge, Massachusetts 02142, United States
| | - Xianglin Shi
- Leal Therapeutics, Worcester, Massachusetts 01609, United States
| | - Firoz Antia
- Oligonucleotide Process Development, Biogen, Cambridge, Massachusetts 02142, United States
| | - Xiao Zhou
- Oligonucleotide Process Development, Biogen, Cambridge, Massachusetts 02142, United States
| | - Angela Lin
- Department of Chemistry, Princeton University, Princeton, New Jersey 08544, United States
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2
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Ranga PK, Ahmad F, Fatma S, Kumar A, Baranwal D, Vijaya Anand R. Bis(aminoalkyl)cyclopropenylidene (BAC)-Catalyzed Intramolecular Annulation of 2-(2-Formylaryl)-aryl-Substituted p-Quinone Methides to 9-Phenanthrol Derivatives. J Org Chem 2024. [PMID: 39451066 DOI: 10.1021/acs.joc.4c01993] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2024]
Abstract
This article describes a bis(aminoalkyl)cyclopropenylidene (BAC)-catalyzed intramolecular annulation of strategically designed 2-(2-formylaryl)-phenyl-substituted p-quinone methides (p-QMs) to access 9-phenanthrol derivatives and related carbocycles. In addition, the synthetic utility of this methodology has been demonstrated in the synthesis of the seven-membered carbocyclic core of resveratrol-based natural products (±)-shoreaphenol and (±)-malibatol A.
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Affiliation(s)
- Pavit K Ranga
- Department of Chemical Sciences, Indian Institute of Science Education and Research (IISER) Mohali, Sector 81, Knowledge City, SAS Nagar, Manauli (PO), Mohali,Punjab140306, India
| | - Feroz Ahmad
- Department of Chemical Sciences, Indian Institute of Science Education and Research (IISER) Mohali, Sector 81, Knowledge City, SAS Nagar, Manauli (PO), Mohali,Punjab140306, India
| | - Shaheen Fatma
- Department of Chemical Sciences, Indian Institute of Science Education and Research (IISER) Mohali, Sector 81, Knowledge City, SAS Nagar, Manauli (PO), Mohali,Punjab140306, India
| | - Arun Kumar
- Department of Chemical Sciences, Indian Institute of Science Education and Research (IISER) Mohali, Sector 81, Knowledge City, SAS Nagar, Manauli (PO), Mohali,Punjab140306, India
| | - Divyanshu Baranwal
- Department of Chemical Sciences, Indian Institute of Science Education and Research (IISER) Mohali, Sector 81, Knowledge City, SAS Nagar, Manauli (PO), Mohali,Punjab140306, India
| | - Ramasamy Vijaya Anand
- Department of Chemical Sciences, Indian Institute of Science Education and Research (IISER) Mohali, Sector 81, Knowledge City, SAS Nagar, Manauli (PO), Mohali,Punjab140306, India
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3
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Li M, Deng YH, Chang Q, Li J, Wang C, Wang L, Sun TY. Photoinduced Site-Selective Aryl C-H Borylation with Electron-Donor-Acceptor Complex Derived from B 2Pin 2 and Isoquinoline. Molecules 2024; 29:1783. [PMID: 38675603 PMCID: PMC11052414 DOI: 10.3390/molecules29081783] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/26/2024] [Revised: 04/08/2024] [Accepted: 04/08/2024] [Indexed: 04/28/2024] Open
Abstract
Due to boron's metalloid properties, aromatic boron reagents are prevalent synthetic intermediates. The direct borylation of aryl C-H bonds for producing aromatic boron compounds offers an appealing, one-step solution. Despite significant advances in this field, achieving regioselective aryl C-H bond borylation using simple and readily available starting materials still remains a challenge. In this work, we attempted to enhance the reactivity of the electron-donor-acceptor (EDA) complex by selecting different bases to replace the organic base (NEt3) used in our previous research. To our delight, when using NH4HCO3 as the base, we have achieved a mild visible-light-mediated aromatic C-H bond borylation reaction with exceptional regioselectivity (rr > 40:1 to single isomers). Compared with our previous borylation methodologies, this protocol provides a more efficient and broader scope for aryl C-H bond borylation through the use of N-Bromosuccinimide. The protocol's good functional-group tolerance and excellent regioselectivity enable the functionalization of a variety of biologically relevant compounds and novel cascade transformations. Mechanistic experiments and theoretical calculations conducted in this study have indicated that, for certain arenes, the aryl C-H bond borylation might proceed through a new reaction mechanism, which involves the formation of a novel transient EDA complex.
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Affiliation(s)
- Manhong Li
- Key Lab of Computational Chemistry and Drug Design, State Key Laboratory of Chemical Oncogenomics, School of Chemical Biology and Biotechnology, Peking University Shenzhen Graduate School, Shenzhen 518055, China; (M.L.); (Y.-H.D.); (C.W.)
- School of Pharmaceutical Sciences (Shenzhen), Sun Yat-sen University, No. 66, Gongchang Road, Shenzhen 518107, China;
- Institute of Molecular Chemical Biology, Shenzhen Bay Laboratory, Shenzhen 518132, China
- Department of Pharmacy and Pharmaceutical Sciences, Faculty of Science, National University of Singapore, Block S4A, Level 3, 18 Science Drive 4, Singapore 117543, Singapore
| | - Yi-Hui Deng
- Key Lab of Computational Chemistry and Drug Design, State Key Laboratory of Chemical Oncogenomics, School of Chemical Biology and Biotechnology, Peking University Shenzhen Graduate School, Shenzhen 518055, China; (M.L.); (Y.-H.D.); (C.W.)
| | - Qianqian Chang
- School of Pharmaceutical Sciences (Shenzhen), Sun Yat-sen University, No. 66, Gongchang Road, Shenzhen 518107, China;
| | - Jinyuan Li
- Shanghai Institute of Organic Chemistry, University of Chinese Academy of Sciences, Chinese Academy of Sciences, 345 Lingling Lu, Shanghai 200032, China;
| | - Chao Wang
- Key Lab of Computational Chemistry and Drug Design, State Key Laboratory of Chemical Oncogenomics, School of Chemical Biology and Biotechnology, Peking University Shenzhen Graduate School, Shenzhen 518055, China; (M.L.); (Y.-H.D.); (C.W.)
| | - Leifeng Wang
- School of Pharmaceutical Sciences (Shenzhen), Sun Yat-sen University, No. 66, Gongchang Road, Shenzhen 518107, China;
| | - Tian-Yu Sun
- Key Lab of Computational Chemistry and Drug Design, State Key Laboratory of Chemical Oncogenomics, School of Chemical Biology and Biotechnology, Peking University Shenzhen Graduate School, Shenzhen 518055, China; (M.L.); (Y.-H.D.); (C.W.)
- Institute of Molecular Chemical Biology, Shenzhen Bay Laboratory, Shenzhen 518132, China
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4
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Xiao W, Wu J. Recent advance in carbocation-catalyzed reactions. CHINESE CHEM LETT 2022. [DOI: 10.1016/j.cclet.2022.06.060] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
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5
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Lin S, Sheng X, Zhang X, Liu H, Luo C, Hou S, Li B, Chen X, Li Y, Xie F. Layered Double Hydroxides as Reusable Catalysts for Cyclocondensation of Amidines and Aminoalcohols: Access to Multi-functionalized Oxazolines. J Org Chem 2021; 87:1366-1376. [PMID: 34964647 DOI: 10.1021/acs.joc.1c02696] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
Abstract
An efficient catalytic protocol based on reusable MgAl-layered double hydroxides has been developed for the synthesis of multi-functionalized oxazolines via the cyclocondensation of amidines and aminoalcohols. The developed method has a broad substrate scope and excellent functional group tolerance and uses a reusable catalyst. The catalyst can be conveniently recycled by filtration and reused for at least five times without obvious deactivation. Additionally, the selective ortho C-H silylation of oxazolines was performed using Ru(II) as the catalyst and triethyl silane as the silylating reagent, which proved to be a convenient and practical method for the synthesis of versatile organosilyl-functionalized oxazolines with advantageous biological and physical properties.
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Affiliation(s)
- Shizhuo Lin
- School of Biotechnology and Health Sciences, Wuyi University, Jiangmen 529020, China
| | - Xing Sheng
- School of Biotechnology and Health Sciences, Wuyi University, Jiangmen 529020, China
| | - Xiangyu Zhang
- School of Biotechnology and Health Sciences, Wuyi University, Jiangmen 529020, China
| | - Haibo Liu
- School of Biotechnology and Health Sciences, Wuyi University, Jiangmen 529020, China
| | - Chujun Luo
- School of Biotechnology and Health Sciences, Wuyi University, Jiangmen 529020, China
| | - Shuaishuai Hou
- School of Biotechnology and Health Sciences, Wuyi University, Jiangmen 529020, China
| | - Bin Li
- School of Biotechnology and Health Sciences, Wuyi University, Jiangmen 529020, China
| | - Xiuwen Chen
- School of Biotechnology and Health Sciences, Wuyi University, Jiangmen 529020, China
| | - Yibiao Li
- School of Biotechnology and Health Sciences, Wuyi University, Jiangmen 529020, China
| | - Feng Xie
- School of Biotechnology and Health Sciences, Wuyi University, Jiangmen 529020, China
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Ranga PK, Ahmad F, Singh G, Tyagi A, Vijaya Anand R. Recent advances in the organocatalytic applications of cyclopropene- and cyclopropenium-based small molecules. Org Biomol Chem 2021; 19:9541-9564. [PMID: 34704583 DOI: 10.1039/d1ob01549d] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
The development of novel small molecule-based catalysts for organic transformations has increased noticeably in the last two decades. A very recent addition to this particular research area is cyclopropene- and cyclopropenium-based catalysts. At one point in time, particularly in the mid-20th century, much attention was focused on the structural aspects and physical properties of cyclopropene-based compounds. However, a paradigm shift was observed in the late 20th century, and the focus shifted to the synthetic utility of these compounds. In fact, a wide range of cyclopropene derivatives have been found serving as valuable synthons for the construction of carbocycles, heterocycles and other useful organic compounds. In the last few years, the catalytic applications of cyclopropene/cyclopropenium-based compounds have been uncovered and many synthetic protocols have been developed using cyclopropene-based compounds as organocatalysts. Therefore, the main objective of this review is to highlight recent developments in the catalytic applications of cyclopropene-based small molecules in different areas of organocatalysis such as phase-transfer catalysis (PTC), Brønsted base catalysis, hydrogen-bond donor catalysis, nucleophilic carbene catalysis, and electrophotocatalysis developed within the past two decades.
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Affiliation(s)
- Pavit K Ranga
- Department of Chemical Sciences, Indian Institute of Science Education and Research (IISER) Mohali, Sector 81, Knowledge City, S.A.S Nagar, Manauli (PO), Punjab - 140306, India.
| | - Feroz Ahmad
- Department of Chemical Sciences, Indian Institute of Science Education and Research (IISER) Mohali, Sector 81, Knowledge City, S.A.S Nagar, Manauli (PO), Punjab - 140306, India.
| | - Gurdeep Singh
- Department of Chemical Sciences, Indian Institute of Science Education and Research (IISER) Mohali, Sector 81, Knowledge City, S.A.S Nagar, Manauli (PO), Punjab - 140306, India.
| | - Akshi Tyagi
- Department of Chemical Sciences, Indian Institute of Science Education and Research (IISER) Mohali, Sector 81, Knowledge City, S.A.S Nagar, Manauli (PO), Punjab - 140306, India.
| | - Ramasamy Vijaya Anand
- Department of Chemical Sciences, Indian Institute of Science Education and Research (IISER) Mohali, Sector 81, Knowledge City, S.A.S Nagar, Manauli (PO), Punjab - 140306, India.
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7
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Ranga PK, Ahmad F, Nager P, Rana PS, Vijaya Anand R. Bis(amino)cyclopropenium Ion as a Hydrogen-Bond Donor Catalyst for 1,6-Conjugate Addition Reactions. J Org Chem 2021; 86:4994-5010. [PMID: 33721500 DOI: 10.1021/acs.joc.0c02940] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The catalytic application of the bis(amino)cyclopropenium ion has been investigated in conjugate addition reactions. The hydrogen atom, which is attached to the cyclopropene ring of bis(amino)cyclopropenium salts, is moderately acidic and can potentially serve as a hydrogen-bond donor catalyst in some organic transformations. This hypothesis has been successfully realized in the 1,6-conjugate addition reactions of p-quinone methides with various nucleophiles such as indole, 2-naphthol, thiols, phenols, and so forth. The spectroscopic studies (NMR and UV-vis) as well as the deuterium isotope labeling studies clearly revealed that the hydrogen atom (C-H) that is present in the cyclopropene ring of the catalyst is indeed solely responsible for catalyzing these transformations. In addition, these studies also strongly indicate that the C-H hydrogen of the cyclopropene ring activates the carbonyl group of the p-quinone methide through hydrogen bonding.
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Affiliation(s)
- Pavit Kumar Ranga
- Department of Chemical Sciences, Indian Institute of Science Education and Research (IISER) Mohali, Sector 81, Knowledge City, Manauli (P.O.), S. A. S. Nagar, Punjab 140306, India
| | - Feroz Ahmad
- Department of Chemical Sciences, Indian Institute of Science Education and Research (IISER) Mohali, Sector 81, Knowledge City, Manauli (P.O.), S. A. S. Nagar, Punjab 140306, India
| | - Prashant Nager
- Department of Chemical Sciences, Indian Institute of Science Education and Research (IISER) Mohali, Sector 81, Knowledge City, Manauli (P.O.), S. A. S. Nagar, Punjab 140306, India
| | - Prabhat Singh Rana
- Department of Chemical Sciences, Indian Institute of Science Education and Research (IISER) Mohali, Sector 81, Knowledge City, Manauli (P.O.), S. A. S. Nagar, Punjab 140306, India
| | - Ramasamy Vijaya Anand
- Department of Chemical Sciences, Indian Institute of Science Education and Research (IISER) Mohali, Sector 81, Knowledge City, Manauli (P.O.), S. A. S. Nagar, Punjab 140306, India
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8
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Guest M, Mir R, Foran G, Hickson B, Necakov A, Dudding T. Trisaminocyclopropenium Cations as Small-Molecule Organic Fluorophores: Design Guidelines and Bioimaging Applications. J Org Chem 2020; 85:13997-14011. [PMID: 32930593 DOI: 10.1021/acs.joc.0c02026] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Abstract
The discovery of fluorescence two centuries ago ushered in, what is today, an illuminating field of science rooted in the rational design of photochromic molecules for task-specific bio-, material-, and medical-driven applications. Today, this includes applications in bioimaging and diagnosis, photodynamic therapy regimes, in addition to photovoltaic devices and solar cells, among a vast multitude of other usages. In furthering this indispensable area of daily life and modern-day scientific research, we report herein the synthesis of a class of trisaminocyclopropenium fluorophores along with a systematic investigation of their unique molecular and electronic dependent photophysical properties. Among these fluorophores, tris[N(naphthalen-2-ylmethyl)phenylamino] cyclopropenium chloride (TNTPC) displayed a strong photophysical profile including a 0.92 quantum yield ascribed to intramolecular charge transfer and intramolecular through-space conjugation. Moreover, this cyclopropenium-based fluorophore functions as a competent imaging agent for DNA visualization and nuclear counterstaining in cell culture. To facilitate the broader use of these compounds, design principles supported by density functional theory calculations for engineering analogs of this class of fluorophores are offered. Collectively, this study adds to the burgeoning interest in cyclopropenium compounds and their unique properties as fluorophores with uses in bioimaging applications.
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Affiliation(s)
- Matt Guest
- Brock University, 1812 Sir Isaac Brock Way, St. Catharines, Ontario L2S 3A1, Canada
| | - Roya Mir
- Brock University, 1812 Sir Isaac Brock Way, St. Catharines, Ontario L2S 3A1, Canada
| | - Gregory Foran
- Brock University, 1812 Sir Isaac Brock Way, St. Catharines, Ontario L2S 3A1, Canada
| | - Brianne Hickson
- Brock University, 1812 Sir Isaac Brock Way, St. Catharines, Ontario L2S 3A1, Canada
| | - Aleksandar Necakov
- Brock University, 1812 Sir Isaac Brock Way, St. Catharines, Ontario L2S 3A1, Canada
| | - Travis Dudding
- Brock University, 1812 Sir Isaac Brock Way, St. Catharines, Ontario L2S 3A1, Canada
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9
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Litterscheidt J, Bandar JS, Ebert M, Forschner R, Bader K, Lambert TH, Frey W, Bühlmeyer A, Brändle M, Schulz F, Laschat S. Self-Assembly of Aminocyclopropenium Salts: En Route to Deltic Ionic Liquid Crystals. Angew Chem Int Ed Engl 2020; 59:10557-10565. [PMID: 32119178 PMCID: PMC7317216 DOI: 10.1002/anie.202000824] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/16/2020] [Revised: 02/25/2020] [Indexed: 01/27/2023]
Abstract
Aminocyclopropenium ions have raised much attention as organocatalysts and redox active polymers. However, the self-assembly of amphiphilic aminocyclopropenium ions remains challenging. The first deltic ionic liquid crystals based on aminocyclopropenium ions have been developed. Differential scanning calorimetry, polarizing optical microscopy and X-ray diffraction provided insight into the unique self-assembly and nanosegregation of these liquid crystals. While the combination of small headgroups with linear p-alkoxyphenyl units led to bilayer-type smectic mesophases, wedge-shaped units resulted in columnar mesophases. Upon increasing the size and polyphilicity of the aminocyclopropenium headgroup, a lamellar phase was formed.
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Affiliation(s)
- Juri Litterscheidt
- Institute of Organic ChemistryUniversity of StuttgartPfaffenwaldring 5570569StuttgartGermany
| | - Jeffrey S. Bandar
- Department of ChemistryColorado State UniversityFort CollinsCO80523USA
| | - Max Ebert
- Institute of Organic ChemistryUniversity of StuttgartPfaffenwaldring 5570569StuttgartGermany
| | - Robert Forschner
- Institute of Organic ChemistryUniversity of StuttgartPfaffenwaldring 5570569StuttgartGermany
| | - Korinna Bader
- Institute of Organic ChemistryUniversity of StuttgartPfaffenwaldring 5570569StuttgartGermany
| | - Tristan H. Lambert
- Department of Chemistry & Chemical BiologyCornell University122 Baker LaboratoryIttacaNY14853USA
- Department of ChemistryColumbia UniversityNew YorkNY10027USA
| | - Wolfgang Frey
- Institute of Organic ChemistryUniversity of StuttgartPfaffenwaldring 5570569StuttgartGermany
| | - Andrea Bühlmeyer
- Institute of Organic ChemistryUniversity of StuttgartPfaffenwaldring 5570569StuttgartGermany
| | - Marcus Brändle
- Institute of Organic ChemistryUniversity of StuttgartPfaffenwaldring 5570569StuttgartGermany
| | - Finn Schulz
- Institute of Organic ChemistryUniversity of StuttgartPfaffenwaldring 5570569StuttgartGermany
| | - Sabine Laschat
- Institute of Organic ChemistryUniversity of StuttgartPfaffenwaldring 5570569StuttgartGermany
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10
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Litterscheidt J, Bandar JS, Ebert M, Forschner R, Bader K, Lambert TH, Frey W, Bühlmeyer A, Brändle M, Schulz F, Laschat S. Self‐Assembly of Aminocyclopropenium Salts: En Route to Deltic Ionic Liquid Crystals. Angew Chem Int Ed Engl 2020. [DOI: 10.1002/ange.202000824] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]
Affiliation(s)
- Juri Litterscheidt
- Institute of Organic Chemistry University of Stuttgart Pfaffenwaldring 55 70569 Stuttgart Germany
| | - Jeffrey S. Bandar
- Department of Chemistry Colorado State University Fort Collins CO 80523 USA
| | - Max Ebert
- Institute of Organic Chemistry University of Stuttgart Pfaffenwaldring 55 70569 Stuttgart Germany
| | - Robert Forschner
- Institute of Organic Chemistry University of Stuttgart Pfaffenwaldring 55 70569 Stuttgart Germany
| | - Korinna Bader
- Institute of Organic Chemistry University of Stuttgart Pfaffenwaldring 55 70569 Stuttgart Germany
| | - Tristan H. Lambert
- Department of Chemistry & Chemical Biology Cornell University 122 Baker Laboratory Ittaca NY 14853 USA
- Department of Chemistry Columbia University New York NY 10027 USA
| | - Wolfgang Frey
- Institute of Organic Chemistry University of Stuttgart Pfaffenwaldring 55 70569 Stuttgart Germany
| | - Andrea Bühlmeyer
- Institute of Organic Chemistry University of Stuttgart Pfaffenwaldring 55 70569 Stuttgart Germany
| | - Marcus Brändle
- Institute of Organic Chemistry University of Stuttgart Pfaffenwaldring 55 70569 Stuttgart Germany
| | - Finn Schulz
- Institute of Organic Chemistry University of Stuttgart Pfaffenwaldring 55 70569 Stuttgart Germany
| | - Sabine Laschat
- Institute of Organic Chemistry University of Stuttgart Pfaffenwaldring 55 70569 Stuttgart Germany
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Smajlagic I, Guest M, Durán R, Herrera B, Dudding T. Mechanistic Insight toward Understanding the Role of Charge in Thiourea Organocatalysis. J Org Chem 2020; 85:585-593. [PMID: 31790584 DOI: 10.1021/acs.joc.9b02682] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Pyranylation and glycosylation are pivotal for accessing a myriad of natural products, pharmaceuticals, and drug candidates. Catalytic approaches for enabling these transformations are of utmost importance and integral to advancing this area of synthesis. In exploring this chemical space, a combined experimental and computational mechanistic study of pyranylation and 2-deoxygalactosylation catalyzed by a cationic thiourea organocatalyst is reported. To this end, a thiourea-cyclopropenium organocatalyst was employed as a model system in combination with an arsenal of mechanistic techniques, including 13C kinetic isotope effect experiments, deuterated labeling studies, variable-temperature 1H NMR spectroscopy, and density functional theory calculations. From these studies, two distinct reaction pathways were identified for this transformation corresponding to either dual hydrogen bond (H-bond) activation or Brønsted acid catalysis. The former involving thiourea orchestrated bifurcated hydrogen bonding proceeded in an asynchronous concerted fashion. In contrast, the latter stepwise mechanism involving Brønsted acid catalysis hinged upon the formation of an oxocarbenium intermediate accompanied by subsequent alcohol addition.
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Affiliation(s)
- Ivor Smajlagic
- Brock University , 1812 Sir Isaac Brock Way , St. Catharines , ON L2S 3A1 , Canada
| | - Matt Guest
- Brock University , 1812 Sir Isaac Brock Way , St. Catharines , ON L2S 3A1 , Canada
| | - Rocío Durán
- Laboratorio de Química Teórica Computacional (QTC), Departamento de Química-Física, Facultad de Química y de Farmacia , Pontificia Universidad Católica de Chile , Av. Vicuña Mackenna 4860 , Macul, Santiago , Chile
| | - Barbara Herrera
- Laboratorio de Química Teórica Computacional (QTC), Departamento de Química-Física, Facultad de Química y de Farmacia , Pontificia Universidad Católica de Chile , Av. Vicuña Mackenna 4860 , Macul, Santiago , Chile
| | - Travis Dudding
- Brock University , 1812 Sir Isaac Brock Way , St. Catharines , ON L2S 3A1 , Canada
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12
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13
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Baheti A, Vigalok A. Short Wavelength Inner Filter Technique (SWIFT) in Designing Reactive Fluorescent Molecular Probes. J Am Chem Soc 2019; 141:12224-12228. [DOI: 10.1021/jacs.9b06033] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
Affiliation(s)
- Abhishek Baheti
- School of Chemistry, The Sackler Faculty of Exact Sciences, Tel Aviv University, Tel Aviv 69978, Israel
| | - Arkadi Vigalok
- School of Chemistry, The Sackler Faculty of Exact Sciences, Tel Aviv University, Tel Aviv 69978, Israel
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14
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Bhatt SV, Bhatt SV, Fotie J. Pt-catalyzed O-silylation of oximes by tri-substituted organosilanes. Tetrahedron Lett 2019. [DOI: 10.1016/j.tetlet.2019.05.033] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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15
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Maejima S, Yamaguchi E, Itoh A. Visible Light/Molecular-Iodine-Mediated Intermolecular Spirolactonization Reaction of Olefins with Cyclic Ketones. J Org Chem 2019; 84:9519-9531. [DOI: 10.1021/acs.joc.9b01081] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Affiliation(s)
- Saki Maejima
- Gifu Pharmaceutical University, 1-25-4, Daigaku-nishi, Gifu 501-1196, Japan
| | - Eiji Yamaguchi
- Gifu Pharmaceutical University, 1-25-4, Daigaku-nishi, Gifu 501-1196, Japan
| | - Akichika Itoh
- Gifu Pharmaceutical University, 1-25-4, Daigaku-nishi, Gifu 501-1196, Japan
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16
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Mir R, Rowshanpour R, Dempsey K, Pilkington M, Dudding T. Selective Aerobic Oxidation of Benzylic Alcohols Catalyzed by a Dicyclopropenylidene-Ag(I) Complex. J Org Chem 2019; 84:5726-5731. [PMID: 30896944 DOI: 10.1021/acs.joc.9b00624] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The unprecedented synthesis, single-crystal X-ray structure, and first catalytic application of a dicarbene-Ag(I) complex [Ag(BAC)2][CO2CF3] (BAC = bis(diisopropyl)aminocyclopropenylidene) is reported. This novel complex provides a versatile catalytic platform for selective aerobic oxidation of benzylic alcohols to aldehyde or ketone products in high yields. Ease of experimental execution coupled with the use of abundant atmospheric molecular oxygen as an oxidant and low catalyst loading are inherit strengths of these oxidations.
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Affiliation(s)
- Roya Mir
- Department of Chemistry , Brock University , 1812 Sir Isaac Brock Way , St. Catharines , Ontario , Canada L2S 3A1
| | - Rozhin Rowshanpour
- Department of Chemistry , Brock University , 1812 Sir Isaac Brock Way , St. Catharines , Ontario , Canada L2S 3A1
| | - Katie Dempsey
- Department of Chemistry , Brock University , 1812 Sir Isaac Brock Way , St. Catharines , Ontario , Canada L2S 3A1
| | - Melanie Pilkington
- Department of Chemistry , Brock University , 1812 Sir Isaac Brock Way , St. Catharines , Ontario , Canada L2S 3A1
| | - Travis Dudding
- Department of Chemistry , Brock University , 1812 Sir Isaac Brock Way , St. Catharines , Ontario , Canada L2S 3A1
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Dempsey K, Mir R, Smajlagic I, Dudding T. Expanding the repertoire of cyclopropenium ion phase transfer catalysis: Benzylic fluorination. Tetrahedron 2018. [DOI: 10.1016/j.tet.2018.04.083] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
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18
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Vartak A, Hefny FM, Sucheck SJ. Synthesis of Oligosaccharide Components of the Outer Core Domain of P. aeruginosa Lipopolysaccharide Using a Multifunctional Hydroquinone-Derived Reducing-End Capping Group. Org Lett 2018; 20:353-356. [PMID: 29285926 PMCID: PMC6169316 DOI: 10.1021/acs.orglett.7b03590] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The synthesis of a trisaccharide (common to glycoform I and II) and a tetrasaccharide (common to glycoform I) from the outer core domain of Pseudomonas aeruginosa lipopolysaccharide (LPS) using a novel hydroquinone-based reducing-end capping group is reported. This multifunctional capping group was utilized as purification handle and was stable toward many common transformations in oligosaccharide synthesis. The access to outer-core LPS antigens with a TBDPS-protected hydroquinone (TPH) at the reducing end will be useful for glycan array and therapeutic glycoconjugate synthesis.
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Affiliation(s)
- Abhishek Vartak
- Department of Chemistry and Biochemistry, University of Toledo, 2801 West Bancroft Street, Toledo, Ohio 43606, United States
| | - Fatma M. Hefny
- Department of Chemistry and Biochemistry, University of Toledo, 2801 West Bancroft Street, Toledo, Ohio 43606, United States
| | - Steven J. Sucheck
- Department of Chemistry and Biochemistry, University of Toledo, 2801 West Bancroft Street, Toledo, Ohio 43606, United States
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