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Iwuala E, Olajide O, Abiodun I, Odjegba V, Utoblo O, Ajewole T, Oluwajobi A, Uzochukwu S. Silicon ameliorates cadmium (Cd) toxicity in pearl millet by inducing antioxidant defense system. Heliyon 2024; 10:e25514. [PMID: 38333779 PMCID: PMC10850601 DOI: 10.1016/j.heliyon.2024.e25514] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2023] [Revised: 01/17/2024] [Accepted: 01/29/2024] [Indexed: 02/10/2024] Open
Abstract
Cadmium (Cd) stress is a significant environmental pollutant that can negatively impact crop yield and growth, and is a serious global issue. However, silicon (Si) has been shown to have a potential function in alleviating the effects of several abiotic stress conditions on crops, including Cd stress. This study investigated the effectiveness of applying silicon to soil as a method for reducing cadmium toxicity in pearl millet (IP14599) seedlings. Seeds of IP14599 were treated with Si + Cd element which cumulated to a combination of 9 treatments. Different Cd concentration of (0, 200, and 300 mg/kg-1) was taken and manually mixed into a sieved soil prior to planting and Si (0, 100 and 200 mg/kg-1) was selectively introduced till after attaining 12 days of seedling emergence. The physiochemical parameters of Cd stressed plants investigated includes chlorophyll, gas exchange attributes, proline, relative water contents, malondialdehyde (MDA) content and antioxidant enzymes (superoxide dismutase (SOD),catalase (CAT), ascorbate peroxidase (APX), peroxidase (POD). Our result revealed that the metal (Cd) caused serious oxidative impairment thereby reducing photosynthetic performance, increased activity of MDA and Cd content in the roots and leaves of IP14599.In addition, Si increased the growth pattern and antioxidant defense action thereby mitigating the Cd toxicity. The results revealed that at Si 200, Si significantly increased the chlorophyll, carotenoids and plant height at 122 %, 69 % and 128 % under the Cd 200 and Cd 300 mg/kg-1 treatment, respectively. The single treatment at Si100 and Si 200 decreased ROS by 29 %, and 37 % respectively and MDA decreased by 33 % and 43 % in contrast to Cd 200 and 300 treatments, respectively. However, Si200 showed significant increase in the activities of APX 97 %, SOD by 89 %, CAT 35 % and POD 86 % as compared to single Si, Cd or combine Cd + Si treatment. Also, a gradual decline in Cd level in both the leaf and root was present when exposed to high concentrations of Si at Si200 and 300 mg/kg-1. Our findings revealed that Si might significantly increase the capacity to tolerate Cd stress in crop plants. Therefore, the study revealed that Si has the potential to alleviate Cd-induced toxicity by reducing Cd assimilation and enhancing the growth attributes of IP14599 plants.
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Affiliation(s)
- Emmanuel Iwuala
- Department of Plant Science and Biotechnology, Federal University Oye Ekiti, Nigeria
| | - Olubunmi Olajide
- Department of Landscape and Horticulture, Ekiti State University, Ekiti, Nigeria
| | - Isaika Abiodun
- Department of Plant Science and Biotechnology, Federal University Oye Ekiti, Nigeria
| | - Victor Odjegba
- Department of Botany, University of Lagos, Akoka, Yaba, Lagos State, Nigeria
| | - Obaiya Utoblo
- Department of Plant Science and Biotechnology, University of Jos, Plateau State, Nigeria
| | - Tolulope Ajewole
- Department of Plant Science and Biotechnology, Federal University Oye Ekiti, Nigeria
| | - Ayoola Oluwajobi
- Department of Plant Science and Biotechnology, Federal University Oye Ekiti, Nigeria
| | - Sylvia Uzochukwu
- Department of Plant Science and Biotechnology, Federal University Oye Ekiti, Nigeria
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Alotaibi NM, Saeed M, Alshammari N, Alabdallah NM, Mahfooz S. Comparative genomics reveals the presence of simple sequence repeats in genes related to virulence in plant pathogenic Pythium ultimum and Pythium vexans. Arch Microbiol 2023; 205:256. [PMID: 37270724 DOI: 10.1007/s00203-023-03595-9] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/15/2023] [Revised: 05/08/2023] [Accepted: 05/21/2023] [Indexed: 06/05/2023]
Abstract
In this study, we evaluated the occurrence, relative abundance (RA), and density (RD) of simple sequence repeats (SSRs) in the complete genome and transcriptomic sequences of the plant pathogenic species of Pythium to acquire a better knowledge of their genome structure and evolution. Among the species, P. ultimum had the highest RA and RD of SSRs in the genomic sequences, whereas P. vexans had the highest RA and RD in the transcriptomic sequences. The genomic and transcriptomic sequences of P. aphanidermatum showed the lowest RA and RD of SSRs. Trinucleotide SSRs were the most prevalent class in both genomic and transcriptomic sequences, while dinucleotide SSRs were the least prevalent. The G + C content of the transcriptomic sequences was found to be positively correlated with the number (r = 0.601) and RA (r = 0.710) of SSRs. A motif conservation study revealed the highest number of unique motifs in P. vexans (9.9%). Overall, a low conservation of motifs was observed among the species (25.9%). A gene enrichment study revealed P. vexans and P. ultimum carry SSRs in their genes that are directly connected to virulence, whereas the remaining two species, P. aphanidermatum and P. arrhenomanes, harbour SSRs in genes involved in transcription, translation, and ATP binding. In an effort to enhance the genomic resources, a total of 11,002 primers from the transcribed regions were designed for the pathogenic Pythium species. Furthermore, the unique motifs identified in this work could be employed as molecular probes for species identification.
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Affiliation(s)
- Nahaa M Alotaibi
- Department of Biology, College of Science, Princess Nourah Bint Abdulrahman University, P.O. Box 84428, Riyadh, 11671, Saudi Arabia
| | - Mohd Saeed
- Department of Biology, College of Science, University of Hail, Hail, 2440, Saudi Arabia
| | - Nawaf Alshammari
- Department of Biology, College of Science, University of Hail, Hail, 2440, Saudi Arabia
| | - Nadiyah M Alabdallah
- Department of Biology, College of Science, Imam Abdulrahman Bin Faisal University, P.O. Box 1982, Dammam, 31441, Saudi Arabia
- Basic and Applied Scientific Research Centre, Imam Abdulrahman Bin Faisal University, P.O. Box 1982, Dammam, 31441, Saudi Arabia
| | - Sahil Mahfooz
- Department of Biotechnology, V.B.S. Purvanchal University, Jaunpur, Uttar Pradesh, 222003, India.
- , The Academic Editors, Saryu Enclave, Awadh Vikas Yojna, Lucknow, 226002, India.
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Parrotta L, Tanwar UK, Aloisi I, Sobieszczuk-Nowicka E, Arasimowicz-Jelonek M, Del Duca S. Plant Transglutaminases: New Insights in Biochemistry, Genetics, and Physiology. Cells 2022; 11:cells11091529. [PMID: 35563835 PMCID: PMC9105555 DOI: 10.3390/cells11091529] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/03/2022] [Revised: 04/26/2022] [Accepted: 04/29/2022] [Indexed: 11/27/2022] Open
Abstract
Transglutaminases (TGases) are calcium-dependent enzymes that catalyse an acyl-transfer reaction between primary amino groups and protein-bound Gln residues. They are widely distributed in nature, being found in vertebrates, invertebrates, microorganisms, and plants. TGases and their functionality have been less studied in plants than humans and animals. TGases are distributed in all plant organs, such as leaves, tubers, roots, flowers, buds, pollen, and various cell compartments, including chloroplasts, the cytoplasm, and the cell wall. Recent molecular, physiological, and biochemical evidence pointing to the role of TGases in plant biology and the mechanisms in which they are involved allows us to consider their role in processes such as photosynthesis, plant fertilisation, responses to biotic and abiotic stresses, and leaf senescence. In the present paper, an in-depth description of the biochemical characteristics and a bioinformatics comparison of plant TGases is provided. We also present the phylogenetic relationship, gene structure, and sequence alignment of TGase proteins in various plant species, not described elsewhere. Currently, our knowledge of these proteins in plants is still insufficient. Further research with the aim of identifying and describing the regulatory components of these enzymes and the processes regulated by them is needed.
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Affiliation(s)
- Luigi Parrotta
- Department of Biological, Geological and Environmental Sciences, University of Bologna, Via Irnerio 42, 40126 Bologna, Italy; (L.P.); (I.A.)
- Interdepartmental Centre for Agri-Food Industrial Research, University of Bologna, Via Quinto Bucci 336, 47521 Cesena, Italy
| | - Umesh Kumar Tanwar
- Department of Plant Physiology, Faculty of Biology, Adam Mickiewicz University in Poznań, Uniwersytetu Poznańskiego 6, 61-614 Poznań, Poland; (U.K.T.); (E.S.-N.)
| | - Iris Aloisi
- Department of Biological, Geological and Environmental Sciences, University of Bologna, Via Irnerio 42, 40126 Bologna, Italy; (L.P.); (I.A.)
| | - Ewa Sobieszczuk-Nowicka
- Department of Plant Physiology, Faculty of Biology, Adam Mickiewicz University in Poznań, Uniwersytetu Poznańskiego 6, 61-614 Poznań, Poland; (U.K.T.); (E.S.-N.)
| | - Magdalena Arasimowicz-Jelonek
- Department of Plant Ecophysiology, Faculty of Biology, Adam Mickiewicz University in Poznań, Uniwersytetu Poznańskiego 6, 61-614 Poznań, Poland;
| | - Stefano Del Duca
- Department of Biological, Geological and Environmental Sciences, University of Bologna, Via Irnerio 42, 40126 Bologna, Italy; (L.P.); (I.A.)
- Interdepartmental Centre for Agri-Food Industrial Research, University of Bologna, Via Quinto Bucci 336, 47521 Cesena, Italy
- Correspondence:
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Ahmad A, Wang R, Mubeen S, Akram W, Hu D, Yasin NA, Khan M, Wu T. Comparative transcriptomics reveals defense acquisition in Brassica rapa by synchronizing brassinosteroids metabolism with PR1 expression. EUROPEAN JOURNAL OF PLANT PATHOLOGY 2022; 162:869-884. [DOI: 10.1007/s10658-021-02443-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Accepted: 12/09/2021] [Indexed: 06/16/2023]
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Ahmad A, Yasin NA, Khan WU, Akram W, Wang R, Shah AA, Akbar M, Ali A, Wu T. Silicon assisted ameliorative effects of iron nanoparticles against cadmium stress: Attaining new equilibrium among physiochemical parameters, antioxidative machinery, and osmoregulators of Phaseolus lunatus. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2021; 166:874-886. [PMID: 34237605 DOI: 10.1016/j.plaphy.2021.06.016] [Citation(s) in RCA: 22] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/03/2021] [Accepted: 06/10/2021] [Indexed: 05/28/2023]
Abstract
Currently, producing safe agricultural commodities from the crop plants cultivated in the soil with increasing heavy metal toxicity is a gigantic challenge in front of researchers. Heavy metals are absorbed and translocated in the crop plants and then transferred to every downstream consumer of the food chain, including humans, causing serious disorders and ailments. The current research presents a combined schematic application of iron nanoparticles (Fe-NPs) and/or silicon (Si), to mitigate cadmium (Cd) stress in Lima bean (Phaseolus lunatus). It was noted that Cd-induced toxicity curtailed growth, antioxidative machinery, glyoxalase system and nutrient uptake of the plants. Furthermore, the physiochemical features of Cd stressed plants, including carotenoids, chlorophyll, photochemical quenching, photosynthetic efficiency, and leaf relative water contents, were improved by the combined application of Si and Fe-NPs. Moreover, higher levels of malondialdehyde (MDA), methylglyoxal (MG), hydrogen peroxide (H2O2), and electrolyte leakage (EL) were observed in Cd stressed plants. Nevertheless, the independent treatment or combined application of Si and/or Fe-NPs attenuated the adversative effects of Cd on the aforementioned growth attributes. Furthermore, Si and Fe-NPs defended plants from the injurious effects of MG by improving the activities of the glyoxalase enzyme. The Si and Fe-NPs reduced Cd contents but at the same time improved uptake and accumulation of nutrients in treated plants exposed to the Cd regime. This study highlights that Si and Fe-NPs have enormous potential to mitigate Cd-induced phytotoxicity by declining Cd uptake and improving the growth attributes of plants if applied in combination.
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Affiliation(s)
- Aqeel Ahmad
- Vegetable Research Institute, Guangdong Academy of Agricultural Sciences / Guangdong Key Laboratory for New Technology Research of Vegetables, Guangzhou, 510640, China
| | | | - Waheed Ullah Khan
- Department of Environmental Science, The Islamia University of Bahawalpur, Pakistan
| | - Waheed Akram
- Vegetable Research Institute, Guangdong Academy of Agricultural Sciences / Guangdong Key Laboratory for New Technology Research of Vegetables, Guangzhou, 510640, China
| | - Rui Wang
- Vegetable Research Institute, Guangdong Academy of Agricultural Sciences / Guangdong Key Laboratory for New Technology Research of Vegetables, Guangzhou, 510640, China
| | - Anis Ali Shah
- Department of Botany, University of Narowal, Narowal, Pakistan
| | - Muhammad Akbar
- Department of Botany, University of Gujrat, Gujrat, Pakistan
| | - Aamir Ali
- Department of Botany, University of Sargodha, Sargodha, Pakistan
| | - Tingquan Wu
- Vegetable Research Institute, Guangdong Academy of Agricultural Sciences / Guangdong Key Laboratory for New Technology Research of Vegetables, Guangzhou, 510640, China.
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Magnetic Field Stimulation Effect on Germination and Antioxidant Activities of Presown Hybrid Seeds of Sunflower and Its Seedlings. J FOOD QUALITY 2021. [DOI: 10.1155/2021/5594183] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023] Open
Abstract
Magnetic field biostimulation plays a significant role in enhancing the germination of seeds and increasing the metabolic rate. The low magnetic field effect for long exposure time and its effect on antioxidant profiling have not been studied. Therefore, in the recent findings, the static magnetic field’s impact on sunflower seeds subjected to the magnetic field at varying intensity (millitesla) for different exposure times was examined. The effectiveness of magnetic biostimulation on presown sunflower seeds, growth parameters of seedlings (biomass, root and shoot length, fresh and dry weight of roots, shoots, leaf, and height of plants), and antioxidant activities were also studied. It has been revealed that magnetic treatment at 50 mT/45 min greatly influenced the growth parameters, including mean germination growth (100 ± 0.02) and final emergence rate. Concerning the antioxidant parameters, seed variety FH620 at 500 µg/µL concentration showed significant results compared to other varieties. FTIR was employed to determine the conformational changes and functional groups of organic compounds from sunflower seedlings. Tocopherol analysis by HPLC showed that magnetic treatment at 50 mT/45 min had a higher concentration of vitamin E compared to the control group. These modifications indicated that magnetic field induction enhanced seeds’ inner energy that led to seedlings’ growth and development enhancement. Besides, magnetic field pretreatment has been shown to have a beneficial influence on sunflower seeds and their bioactive compounds. Future studies should be focused on growth characteristics at the field level and yield attributes.
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