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Lionetti D, Suseno S, Shiau AA, de Ruiter G, Agapie T. Redox Processes Involving Oxygen: The Surprising Influence of Redox-Inactive Lewis Acids. JACS AU 2024; 4:344-368. [PMID: 38425928 PMCID: PMC10900226 DOI: 10.1021/jacsau.3c00675] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/31/2023] [Revised: 12/12/2023] [Accepted: 12/13/2023] [Indexed: 03/02/2024]
Abstract
Metalloenzymes with heteromultimetallic active sites perform chemical reactions that control several biogeochemical cycles. Transformations catalyzed by such enzymes include dioxygen generation and reduction, dinitrogen reduction, and carbon dioxide reduction-instrumental transformations for progress in the context of artificial photosynthesis and sustainable fertilizer production. While the roles of the respective metals are of interest in all these enzymatic transformations, they share a common factor in the transfer of one or multiple redox equivalents. In light of this feature, it is surprising to find that incorporation of redox-inactive metals into the active site of such an enzyme is critical to its function. To illustrate, the presence of a redox-inactive Ca2+ center is crucial in the Oxygen Evolving Complex, and yet particularly intriguing given that the transformation catalyzed by this cluster is a redox process involving four electrons. Therefore, the effects of redox inactive metals on redox processes-electron transfer, oxygen- and hydrogen-atom transfer, and O-O bond cleavage and formation reactions-mediated by transition metals have been studied extensively. Significant effects of redox inactive metals have been observed on these redox transformations; linear free energy correlations between Lewis acidity and the redox properties of synthetic model complexes are observed for several reactions. In this Perspective, these effects and their relevance to multielectron processes will be discussed.
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Affiliation(s)
| | - Sandy Suseno
- Division of Chemistry and
Chemical Engineering, California Institute
of Technology, 1200 East California Boulevard, MC 127-72, Pasadena, California 91125, United States
| | - Angela A. Shiau
- Division of Chemistry and
Chemical Engineering, California Institute
of Technology, 1200 East California Boulevard, MC 127-72, Pasadena, California 91125, United States
| | - Graham de Ruiter
- Division of Chemistry and
Chemical Engineering, California Institute
of Technology, 1200 East California Boulevard, MC 127-72, Pasadena, California 91125, United States
| | - Theodor Agapie
- Division of Chemistry and
Chemical Engineering, California Institute
of Technology, 1200 East California Boulevard, MC 127-72, Pasadena, California 91125, United States
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2
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Panda S, Phan H, Karlin KD. Heme-copper and Heme O 2-derived synthetic (bioinorganic) chemistry toward an understanding of cytochrome c oxidase dioxygen chemistry. J Inorg Biochem 2023; 249:112367. [PMID: 37742491 PMCID: PMC10615892 DOI: 10.1016/j.jinorgbio.2023.112367] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/05/2023] [Revised: 08/22/2023] [Accepted: 09/07/2023] [Indexed: 09/26/2023]
Abstract
Cytochrome c oxidase (CcO), also widely known as mitochondrial electron-transport-chain complex IV, is a multi-subunit transmembrane protein responsible for catalyzing the last step of the electron transport chain, dioxygen reduction to water, which is essential to the establishment and maintenance of the membrane proton gradient that drives ATP synthesis. Although many intermediates in the CcO catalytic cycle have been spectroscopically and/or computationally authenticated, the specifics regarding the IP intermediate, hypothesized to be a heme-Cu (hydro)peroxo species whose O-O bond homolysis is supported by a hydrogen-bonding network of water molecules, are largely obscured by the fast kinetics of the A (FeIII-O2•-/CuI/Tyr) → PM (FeIV=O/CuII-OH/Tyr•) step. In this review, we have focused on the recent advancements in the design, development, and characterization of synthetic heme-peroxo‑copper model complexes, which can circumvent the abovementioned limitation, for the investigation of the formation of IP and its O-O cleavage chemistry. Novel findings regarding (a) proton and electron transfer (PT/ET) processes, together with their contributions to exogenous phenol induced O-O cleavage, (b) the stereo-electronic tunability of the secondary coordination sphere (especially hydrogen-bonding) on the geometric and spin state alteration of the heme-peroxo‑copper unit, and (c) a plausible mechanism for the Tyr-His cofactor biogenesis, are discussed in great detail. Additionally, since the ferric-superoxide and the ferryl-oxo (Compound II) species are critically involved in the CcO catalytic cycle, this review also highlights a few fundamental aspects of these heme-only (i.e., without copper) species, including the structural and reactivity influences of electron-donating trans-axial ligands and Lewis acid-promoted H-bonding.
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Affiliation(s)
- Sanjib Panda
- Department of Chemistry, Johns Hopkins University, Baltimore, MD 21218, USA
| | - Hai Phan
- Department of Chemistry, Johns Hopkins University, Baltimore, MD 21218, USA
| | - Kenneth D Karlin
- Department of Chemistry, Johns Hopkins University, Baltimore, MD 21218, USA.
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3
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Jiang YY, Chen C. Recent advances in computational studies on Cu-catalyzed aerobic reactions: cooperation of copper catalysts and dioxygen. Org Biomol Chem 2023; 21:7852-7872. [PMID: 37725071 DOI: 10.1039/d3ob00976a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/21/2023]
Abstract
O2, one of the ideal oxidants, suffers from low solubility, low oxidizability, low selectivity and a triplet ground state when applied in organic synthesis. Biomimetic copper catalysis has been demonstrated to be a powerful method for activating and transforming O2 to conduct aerobic reactions for a long time. On the other hand, the structures of Cu-O2 complexes are complex with diverse downstream reactions, whereas active copper intermediates were rarely identified by experimental methods, making the mechanisms of many Cu-catalyzed aerobic reactions far from clear. In this context, computational studies emerged as an effective alternative to mechanistic studies on Cu-catalyzed aerobic reactions. This review introduces the relevant computational studies since 2012, focusing on showing the cooperation of copper catalysts and O2 in dehydrogenation, oxygenation and coupling reactions.
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Affiliation(s)
- Yuan-Ye Jiang
- Key Laboratory of Catalytic Conversion and Clean Energy in Universities of Shandong Province, School of Chemistry and Chemical Engineering, Qufu Normal University, Qufu 273165, People's Republic of China.
| | - Chao Chen
- Key Laboratory of Catalytic Conversion and Clean Energy in Universities of Shandong Province, School of Chemistry and Chemical Engineering, Qufu Normal University, Qufu 273165, People's Republic of China.
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4
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Sharif R, Khalid A, Ahmad SW, Rehman A, Qutab HG, Akhtar HH, Mahmood K, Afzal S, Saleem F. A comprehensive review of the current progresses and material advances in perovskite solar cells. NANOSCALE ADVANCES 2023; 5:3803-3833. [PMID: 37496623 PMCID: PMC10367966 DOI: 10.1039/d3na00319a] [Citation(s) in RCA: 8] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/11/2023] [Accepted: 06/20/2023] [Indexed: 07/28/2023]
Abstract
Recently, perovskite solar cells (PSCs) have attracted ample consideration from the photovoltaic community owing to their continually-increasing power conversion efficiency (PCE), viable solution-processed methods, and inexpensive materials ingredients. Over the past few years, the performance of perovskite-based devices has exceeded 25% due to superior perovskite films achieved using low-temperature synthesis procedures along with evolving appropriate interface and electrode-materials. The current review provides comprehensive knowledge to enhance the performance and materials advances for perovskite solar cells. The latest progress in terms of perovskite crystal structure, device construction, fabrication procedures, and challenges are thoroughly discussed. Also discussed are the different layers such as ETLs and buffer-layers employed in perovskite solar-cells, seeing their transmittance, carrier mobility, and band gap potentials in commercialization. Generally, this review delivers a critical assessment of the improvements, prospects, and trials of PSCs.
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Affiliation(s)
- Rabia Sharif
- Department of Chemical & Polymer Engineering, University of Engineering & Technology Lahore Faisalabad Campus, 3½ Km. Khurrianwala - Makkuana By-Pass Faisalabad Pakistan
| | - Arshi Khalid
- Department of Humanities & Basic Sciences, University of Engineering & Technology Lahore Faisalabad Campus, 3½ Km. Khurrianwala - Makkuana By-Pass Faisalabad Pakistan
| | - Syed Waqas Ahmad
- Department of Chemical & Polymer Engineering, University of Engineering & Technology Lahore Faisalabad Campus, 3½ Km. Khurrianwala - Makkuana By-Pass Faisalabad Pakistan
| | - Abdul Rehman
- Department of Chemical & Polymer Engineering, University of Engineering & Technology Lahore Faisalabad Campus, 3½ Km. Khurrianwala - Makkuana By-Pass Faisalabad Pakistan
| | - Haji Ghulam Qutab
- Department of Chemical & Polymer Engineering, University of Engineering & Technology Lahore Faisalabad Campus, 3½ Km. Khurrianwala - Makkuana By-Pass Faisalabad Pakistan
| | - Hafiz Husnain Akhtar
- Department of Chemical & Polymer Engineering, University of Engineering & Technology Lahore Faisalabad Campus, 3½ Km. Khurrianwala - Makkuana By-Pass Faisalabad Pakistan
| | - Khalid Mahmood
- Department of Chemical & Polymer Engineering, University of Engineering & Technology Lahore Faisalabad Campus, 3½ Km. Khurrianwala - Makkuana By-Pass Faisalabad Pakistan
| | - Shabana Afzal
- Department of Basic Sciences, Humanities Muhammad Nawaz Shareef University of Engineering and Technology Multan Pakistan
| | - Faisal Saleem
- Department of Chemical & Polymer Engineering, University of Engineering & Technology Lahore Faisalabad Campus, 3½ Km. Khurrianwala - Makkuana By-Pass Faisalabad Pakistan
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5
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Kulesa KM, Padilha DS, Thapa B, Mazumder S, Losovyj Y, Schlegel HB, Scarpellini M, Verani CN. A bioinspired cobalt catalyst based on a tripodal imidazole/pyridine platform capable of water reduction and oxidation. J Inorg Biochem 2023; 242:112162. [PMID: 36841008 DOI: 10.1016/j.jinorgbio.2023.112162] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/17/2021] [Revised: 02/04/2023] [Accepted: 02/13/2023] [Indexed: 02/17/2023]
Abstract
The prototypical drug carrier [CoII(L1)Cl]PF6 (1), where L1 is a tripodal amine bound to pyridine and methyl-imidazoles, had its electrocatalytic water splitting activity studied under different pH conditions. This species contains a high-spin 3d7 CoII metal center, and is capable of generating both H2 from water reduction and O2 from water oxidation. Turnover numbers reach 390 after 3 h for water reduction. Initial water oxidation activity is molecular, with TONs of 71 at pH 7 and 103 at pH 11.5. The results reveal that species 1 can undergo several redox transformations, including reduction to the 3d8 CoI species that precedes a LS3d6 hydride for water reduction, as well as nominal CoIVO and CoIII-OOH species required for water oxidation. Post-catalytic analyses confirm the molecular nature of reduction and support initial molecular activity for oxidation.
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Affiliation(s)
- Krista M Kulesa
- Department of Chemistry, Wayne State University, 5101 Cass Avenue, Detroit, MI 48202, USA
| | - Diego S Padilha
- Instituto de Química, Universidade Federal do Rio de Janeiro, Rio de Janeiro, RJ 21941-611, Brazil
| | - Bishnu Thapa
- Department of Chemistry, Wayne State University, 5101 Cass Avenue, Detroit, MI 48202, USA
| | - Shivnath Mazumder
- Department of Chemistry, Indian Institute of Technology Jammu, Jammu 181221, India
| | - Yaroslav Losovyj
- Department of Chemistry, Indiana University, Bloomington, 800 E. Kirkwood Avenue, Bloomington, IN 47405, USA
| | - H Bernhard Schlegel
- Department of Chemistry, Wayne State University, 5101 Cass Avenue, Detroit, MI 48202, USA.
| | - Marciela Scarpellini
- Instituto de Química, Universidade Federal do Rio de Janeiro, Rio de Janeiro, RJ 21941-611, Brazil.
| | - Cláudio N Verani
- Department of Chemistry, Wayne State University, 5101 Cass Avenue, Detroit, MI 48202, USA.
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6
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Liao G, Mei F, Chen Z, Yin G. Lewis acid improved dioxygen activation by a non-heme iron(II) complex towards tryptophan 2,3-dioxygenase activity for olefin oxygenation. Dalton Trans 2022; 51:18024-18032. [PMID: 36373374 DOI: 10.1039/d2dt02769k] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Abstract
Dioxygen activation and catalysis around ambient temperature is a long-standing challenge in chemistry. Inspired by the significant roles of the hydrogen bond network in dioxygen activation and catalysis by redox enzymes, this work presents a Lewis acid improved dioxygen activation by an FeII(BPMEN)(OTf)2 complex towards tryptophan 2,3-dioxygenase (TDO) activity for 3-methylindole and common olefinic CC bond oxygenation and cleavage (enzymatic Brønsted acid vs. chemical Lewis acid). It was found that the presence of a Lewis acid such as Sc3+ could substantially improve olefinic CC bond oxygenation and cleavage activity through FeII(BPMEN)(OTf)2 catalyzed dioxygen activation. Notably, a more negative ρ value in the Hammett plot of para-substituted styrene oxygenations was observed in the presence of a stronger Lewis acid, disclosing the enhanced electrophilic oxygenation capability of the putative iron(III) superoxo species through its electrostatic interaction with a stronger Lewis acid. Thereof, this work has demonstrated a new strategy in catalyst design for dioxygen activation and catalysis for olefin oxygenation, a significant process in the chemical industry.
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Affiliation(s)
- Guangjian Liao
- School of Chemistry and Chemical Engineering, Key laboratory of Material Chemistry for Energy Conversion and Storage (Huazhong University of Science and Technology), Ministry of Education, Hubei Key Laboratory of Material Chemistry and Service Failure, Huazhong University of Science and Technology, Wuhan 430074, PR China.
| | - Fuming Mei
- School of Chemistry and Chemical Engineering, Key laboratory of Material Chemistry for Energy Conversion and Storage (Huazhong University of Science and Technology), Ministry of Education, Hubei Key Laboratory of Material Chemistry and Service Failure, Huazhong University of Science and Technology, Wuhan 430074, PR China.
| | - Zhuqi Chen
- School of Chemistry and Chemical Engineering, Key laboratory of Material Chemistry for Energy Conversion and Storage (Huazhong University of Science and Technology), Ministry of Education, Hubei Key Laboratory of Material Chemistry and Service Failure, Huazhong University of Science and Technology, Wuhan 430074, PR China.
| | - Guochuan Yin
- School of Chemistry and Chemical Engineering, Key laboratory of Material Chemistry for Energy Conversion and Storage (Huazhong University of Science and Technology), Ministry of Education, Hubei Key Laboratory of Material Chemistry and Service Failure, Huazhong University of Science and Technology, Wuhan 430074, PR China.
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7
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Majumder A, Sk S, Das A, Vijaykumar G, Sahoo MK, Behera JN, Bera M. Ancillary-Ligand-Assisted Variation in Nuclearities Leading to the Formation of Di-, Tri-, and Tetranuclear Copper(II) Complexes with Multifaceted Carboxylate Coordination Chemistry. ACS OMEGA 2022; 7:39985-39997. [PMID: 36385820 PMCID: PMC9647862 DOI: 10.1021/acsomega.2c04627] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/22/2022] [Accepted: 10/17/2022] [Indexed: 06/16/2023]
Abstract
The self-assembly of a carboxylate-based dinucleating ligand, N,N'-bis[2-carboxybenzomethyl]-N,N'-bis[2-pyridylmethyl]-1,3-diaminopropan-2-ol (H3cpdp), and copper(II) ions in the presence of various exogenous ancillary ligands results in the formation of the new dinuclear complex [Cu2(cpdp)(μ-Hisophth)]4·2H2isophth·21H2O (1), trinuclear complex [Cu3(Hcpdp)(Cl)4] (2), and tetranuclear complex [Cu4(cpdp)(μ-Hphth)(μ4-phth)(piconol)(Cl)2]·3H2O (3) (H2phth = phthalic acid; H2isophth = isophthalic acid; piconol = 2-pyridinemethanol; Cl- = chloride). In methanol-water, the reaction of H3cpdp with CuCl2·2H2O at room temperature leads to the formation of 2. On the other hand, 1 and 3 have been obtained by carrying out the reaction of H3cpdp with CuCl2·2H2O/m-C6H4(CO2Na)2 and CuCl2·2H2O/o-C6H4(CO2Na)2/piconol, respectively, in methanol-water in the presence of NaOH at ambient temperature. All three complexes have been characterized by elemental analysis, molar electrical conductivity and magnetic moment measurements, FTIR, UV-vis spectroscopy, and PXRD, including single-crystal X-ray structural analyses. The molecular structure of 1 is based on a μ-alkoxide and μ-isophthalate-bridged dimeric [Cu2] core; the structure of 2 represents a trimeric [Cu3] core in which a μ-alcohol-bridged dinuclear [Cu2] unit is exclusively coupled with a [CuCl2] species by two μ:η1:η1-syn-anti carboxylate groups forming a triangular motif; the structure of 3 embodies a tetrameric [Cu4] core, with two copper(II) ions in a distorted-octahedral coordination environment, one copper(II) ion in a distorted-trigonal-bipyramidal coordination environment, and the other copper(II) ion in a square-planar coordination environment. In fact, 2 and 3 represent rare examples of copper(II)-based multinuclear complexes showing outstanding features of rich coordination chemistry: (i) using a symmetrical dinucleating ligand, trinuclear complex 2 is generated with four- and five-coordination environments around copper(II) ions; (ii) the unsymmetrical tetranuclear complex 3 is obtained by using the same ligand with four-, five- and six-coordination environments around copper(II) ions; (iii) tetracopper(II) complex 3 shows four different bridging modes of carboxylate groups simultaneously such as μ:η2, μ:η1:η1, μ3:η2:η1:η1, and μ4:η1:η1:η1:η1, the μ4:η1:η1:η1:η1 mode of phthalate being unprecedented. The formation of these [Cu2], [Cu3], and [Cu4] complexes can be controlled by changing the exogenous ancillary ligands and pH of the reaction solutions, thus allowing an effective tuning of the self-assembly. The magnetic susceptibility measurements suggest that the copper centers in all three complexes are antiferromagnetically coupled. The thermal properties of 1-3 have been investigated by thermogravimetric and differential thermal analytical (TGA and DTA) techniques, indicating that the decomposition of all three complexes proceeds via multistep processes.
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Affiliation(s)
- Avishek Majumder
- Department
of Chemistry, University of Kalyani, Kalyani, Nadia, West Bengal 741235, India
| | - Sujan Sk
- Department
of Chemistry, University of Kalyani, Kalyani, Nadia, West Bengal 741235, India
| | - Arpan Das
- Department
of Chemical Sciences, Indian Institute of
Science Education & Research-Kolkata, Mohanpur, West Bengal 741246, India
| | - Gonela Vijaykumar
- Department
of Chemical Sciences, Indian Institute of
Science Education & Research-Kolkata, Mohanpur, West Bengal 741246, India
| | - Malaya K. Sahoo
- School
of Chemical Sciences, National Institute
of Science Education & Research, An OCC of Homi Bhabha National
Institute, Bhubaneswar, Khurda, Odisha 752050, India
| | - J. N. Behera
- School
of Chemical Sciences, National Institute
of Science Education & Research, An OCC of Homi Bhabha National
Institute, Bhubaneswar, Khurda, Odisha 752050, India
| | - Manindranath Bera
- Department
of Chemistry, University of Kalyani, Kalyani, Nadia, West Bengal 741235, India
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8
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Nayek A, Ahmed ME, Samanta S, Dinda S, Patra S, Dey SG, Dey A. Bioinorganic Chemistry on Electrodes: Methods to Functional Modeling. J Am Chem Soc 2022; 144:8402-8429. [PMID: 35503922 DOI: 10.1021/jacs.2c01842] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Abstract
One of the major goals of bioinorganic chemistry has been to mimic the function of elegant metalloenzymes. Such functional modeling has been difficult to attain in solution, in particular, for reactions that require multiple protons and multiple electrons (nH+/ne-). Using a combination of heterogeneous electrochemistry, electrode and molecule design one may control both electron transfer (ET) and proton transfer (PT) of these nH+/ne- reactions. Such control can allow functional modeling of hydrogenases (H+ + e- → 1/2 H2), cytochrome c oxidase (O2 + 4 e- + 4 H+ → 2 H2O), monooxygenases (RR'CH2 + O2 + 2 e- + 2 H+ → RR'CHOH + H2O) and dioxygenases (S + O2 → SO2; S = organic substrate) in aqueous medium and at room temperatures. In addition, these heterogeneous constructs allow probing unnatural bioinspired reactions and estimation of the inner- and outer-sphere reorganization energy of small molecules and proteins.
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Affiliation(s)
- Abhijit Nayek
- School of Chemical Sciences, Indian Association for the Cultivation of Science, 2A Raja SC Mullick Road, Kolkata, WB India 700032
| | - Md Estak Ahmed
- School of Chemical Sciences, Indian Association for the Cultivation of Science, 2A Raja SC Mullick Road, Kolkata, WB India 700032
| | - Soumya Samanta
- School of Chemical Sciences, Indian Association for the Cultivation of Science, 2A Raja SC Mullick Road, Kolkata, WB India 700032
| | - Souvik Dinda
- School of Chemical Sciences, Indian Association for the Cultivation of Science, 2A Raja SC Mullick Road, Kolkata, WB India 700032
| | - Suman Patra
- School of Chemical Sciences, Indian Association for the Cultivation of Science, 2A Raja SC Mullick Road, Kolkata, WB India 700032
| | - Somdatta Ghosh Dey
- School of Chemical Sciences, Indian Association for the Cultivation of Science, 2A Raja SC Mullick Road, Kolkata, WB India 700032
| | - Abhishek Dey
- School of Chemical Sciences, Indian Association for the Cultivation of Science, 2A Raja SC Mullick Road, Kolkata, WB India 700032
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9
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Bhunia S, Ghatak A, Dey A. Second Sphere Effects on Oxygen Reduction and Peroxide Activation by Mononuclear Iron Porphyrins and Related Systems. Chem Rev 2022; 122:12370-12426. [PMID: 35404575 DOI: 10.1021/acs.chemrev.1c01021] [Citation(s) in RCA: 35] [Impact Index Per Article: 17.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Activation and reduction of O2 and H2O2 by synthetic and biosynthetic iron porphyrin models have proved to be a versatile platform for evaluating second-sphere effects deemed important in naturally occurring heme active sites. Advances in synthetic techniques have made it possible to install different functional groups around the porphyrin ligand, recreating artificial analogues of the proximal and distal sites encountered in the heme proteins. Using judicious choices of these substituents, several of the elegant second-sphere effects that are proposed to be important in the reactivity of key heme proteins have been evaluated under controlled environments, adding fundamental insight into the roles played by these weak interactions in nature. This review presents a detailed description of these efforts and how these have not only demystified these second-sphere effects but also how the knowledge obtained resulted in functional mimics of these heme enzymes.
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Affiliation(s)
- Sarmistha Bhunia
- School of Chemical Science, Indian Association for the Cultivation of Science, 2A Raja SC Mullick Road, Kolkata 700032, India
| | - Arnab Ghatak
- School of Chemical Science, Indian Association for the Cultivation of Science, 2A Raja SC Mullick Road, Kolkata 700032, India
| | - Abhishek Dey
- School of Chemical Science, Indian Association for the Cultivation of Science, 2A Raja SC Mullick Road, Kolkata 700032, India
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10
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Singha A, Mittra K, Dey A. Synthetic heme dioxygen adducts: electronic structure and reactivity. TRENDS IN CHEMISTRY 2022. [DOI: 10.1016/j.trechm.2021.10.008] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
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11
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Water oxidation and oxygen reduction reactions: A mechanistic perspective. ADVANCES IN INORGANIC CHEMISTRY 2022. [DOI: 10.1016/bs.adioch.2022.07.005] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
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12
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Understanding the mechanism(s) of ketone oxidation on VOx/γ-Al2O3. J Catal 2021. [DOI: 10.1016/j.jcat.2021.09.003] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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13
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Reed CJ, Lam QN, Mirts EN, Lu Y. Molecular understanding of heteronuclear active sites in heme-copper oxidases, nitric oxide reductases, and sulfite reductases through biomimetic modelling. Chem Soc Rev 2021; 50:2486-2539. [PMID: 33475096 PMCID: PMC7920998 DOI: 10.1039/d0cs01297a] [Citation(s) in RCA: 15] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Abstract
Heme-copper oxidases (HCO), nitric oxide reductases (NOR), and sulfite reductases (SiR) catalyze the multi-electron and multi-proton reductions of O2, NO, and SO32-, respectively. Each of these reactions is important to drive cellular energy production through respiratory metabolism and HCO, NOR, and SiR evolved to contain heteronuclear active sites containing heme/copper, heme/nonheme iron, and heme-[4Fe-4S] centers, respectively. The complexity of the structures and reactions of these native enzymes, along with their large sizes and/or membrane associations, make it challenging to fully understand the crucial structural features responsible for the catalytic properties of these active sites. In this review, we summarize progress that has been made to better understand these heteronuclear metalloenzymes at the molecular level though study of the native enzymes along with insights gained from biomimetic models comprising either small molecules or proteins. Further understanding the reaction selectivity of these enzymes is discussed through comparisons of their similar heteronuclear active sites, and we offer outlook for further investigations.
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Affiliation(s)
- Christopher J Reed
- Department of Chemistry, University of Illinois at Urbana-Champaign, Urban, IL 61801, USA.
| | - Quan N Lam
- Department of Biochemistry, University of Illinois at Urbana-Champaign, Urban, IL 61801, USA
| | - Evan N Mirts
- Center for Biophysics and Quantitative Biology, University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA and Carl R. Woese Institute for Genomic Biology, University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA
| | - Yi Lu
- Department of Chemistry, University of Illinois at Urbana-Champaign, Urban, IL 61801, USA. and Department of Biochemistry, University of Illinois at Urbana-Champaign, Urban, IL 61801, USA and Center for Biophysics and Quantitative Biology, University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA and Carl R. Woese Institute for Genomic Biology, University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA
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14
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Marquardt M, Cula B, Budhija V, Dallmann A, Schwalbe M. Structural Determination of an Unusual Cu I -Porphyrin-π-Bond in a Hetero-Pacman Cu-Zn-Complex. Chemistry 2021; 27:3991-3996. [PMID: 33405305 PMCID: PMC7986761 DOI: 10.1002/chem.202004945] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/13/2020] [Revised: 12/17/2020] [Indexed: 12/02/2022]
Abstract
The synthesis and characterization of a hetero‐dinuclear compound is presented, in which a copper(I) trishistidine type coordination unit is positioned directly above a zinc porphyrin unit. The close distance between the two coordination fragments is secured by a rigid xanthene backbone, and a unique (intramolecular) copper porphyrin‐π‐bond was determined for the first time in the molecular structure. This structural motif was further analyzed by temperature‐dependent NMR studies: In solution at room temperature the coordinative bond fluctuates, while it can be frozen at low temperatures. Preliminary reactivity studies revealed a reduced reactivity of the copper(I) moiety towards dioxygen. The results adumbrate why nature is avoiding metal porphyrin‐π‐bonds by fixing reactive metal centers in a predetermined distance to each other within multimetallic enzymatic reaction centers.
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Affiliation(s)
- Michael Marquardt
- Institute of Chemistry, Humboldt-Universität zu Berlin, Brook-Taylor-Strasse 2, 12489, Berlin, Germany
| | - Beatrice Cula
- Institute of Chemistry, Humboldt-Universität zu Berlin, Brook-Taylor-Strasse 2, 12489, Berlin, Germany
| | - Vishal Budhija
- Institute of Chemistry, Humboldt-Universität zu Berlin, Brook-Taylor-Strasse 2, 12489, Berlin, Germany
| | - André Dallmann
- Institute of Chemistry, Humboldt-Universität zu Berlin, Brook-Taylor-Strasse 2, 12489, Berlin, Germany
| | - Matthias Schwalbe
- Institute of Chemistry, Humboldt-Universität zu Berlin, Brook-Taylor-Strasse 2, 12489, Berlin, Germany
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15
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Mukherjee S, Nayek A, Bhunia S, Dey SG, Dey A. A Single Iron Porphyrin Shows pH Dependent Switch between "Push" and "Pull" Effects in Electrochemical Oxygen Reduction. Inorg Chem 2020; 59:14564-14576. [PMID: 32970430 DOI: 10.1021/acs.inorgchem.0c02408] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The "push-pull" effects associated with heme enzymes manifest themselves through highly evolved distal amino acid environments and axial ligands to the heme. These conserved residues enhance their reactivities by orders of magnitude relative to small molecules that mimic the primary coordination. An instance of a mononuclear iron porphyrin with covalently attached pendent phenanthroline groups is reported which exhibit reactivity indicating a pH dependent "push" to "pull" transition in the same molecule. The pendant phenanthroline residues provide proton transfer pathways into the iron site, ensuring selective 4e-/4H+ reduction of O2 to water. The protonation of these residues at lower pH mimics the pull effect of peroxidases, and a coordination of an axial hydroxide ligand at high pH emulates the push effect of P450 monooxygenases. Both effects enhance the rate of O2 reduction by orders of magnitude over its value at neutral pH while maintaining exclusive selectivity for 4e-/4H+ oxygen reduction reaction.
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Affiliation(s)
- Sudipta Mukherjee
- School of Chemical Sciences, Indian Association for the Cultivation of Science, 2A & 2B Raja S.C. Mullick Road, Kolkata 700032, West Bengal, India
| | - Abhijit Nayek
- School of Chemical Sciences, Indian Association for the Cultivation of Science, 2A & 2B Raja S.C. Mullick Road, Kolkata 700032, West Bengal, India
| | - Sarmistha Bhunia
- School of Chemical Sciences, Indian Association for the Cultivation of Science, 2A & 2B Raja S.C. Mullick Road, Kolkata 700032, West Bengal, India
| | - Somdatta Ghosh Dey
- School of Chemical Sciences, Indian Association for the Cultivation of Science, 2A & 2B Raja S.C. Mullick Road, Kolkata 700032, West Bengal, India
| | - Abhishek Dey
- School of Chemical Sciences, Indian Association for the Cultivation of Science, 2A & 2B Raja S.C. Mullick Road, Kolkata 700032, West Bengal, India
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16
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Battistella B, Heims F, Cula B, Ray K. Synthesis, Characterization, and Reactivity of a Series of Homo‐ and Hetero‐dinuclear Complexes based on an Asymmetric FloH Ligand System. Z Anorg Allg Chem 2020. [DOI: 10.1002/zaac.202000221] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Affiliation(s)
- Beatrice Battistella
- Institut für Chemie Humboldt‐Universität zu Berlin Brook‐Taylor Str. 2 12489 Berlin Germany
| | - Florian Heims
- Institut für Chemie Humboldt‐Universität zu Berlin Brook‐Taylor Str. 2 12489 Berlin Germany
| | - Beatrice Cula
- Institut für Chemie Humboldt‐Universität zu Berlin Brook‐Taylor Str. 2 12489 Berlin Germany
| | - Kallol Ray
- Institut für Chemie Humboldt‐Universität zu Berlin Brook‐Taylor Str. 2 12489 Berlin Germany
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17
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Ferousi C, Majer SH, DiMucci IM, Lancaster KM. Biological and Bioinspired Inorganic N-N Bond-Forming Reactions. Chem Rev 2020; 120:5252-5307. [PMID: 32108471 PMCID: PMC7339862 DOI: 10.1021/acs.chemrev.9b00629] [Citation(s) in RCA: 46] [Impact Index Per Article: 11.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
Abstract
The metallobiochemistry underlying the formation of the inorganic N-N-bond-containing molecules nitrous oxide (N2O), dinitrogen (N2), and hydrazine (N2H4) is essential to the lifestyles of diverse organisms. Similar reactions hold promise as means to use N-based fuels as alternative carbon-free energy sources. This review discusses research efforts to understand the mechanisms underlying biological N-N bond formation in primary metabolism and how the associated reactions are tied to energy transduction and organismal survival. These efforts comprise studies of both natural and engineered metalloenzymes as well as synthetic model complexes.
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Affiliation(s)
- Christina Ferousi
- Department of Chemistry and Chemical Biology, Baker Laboratory, Cornell University, Ithaca, New York 14853, United States
| | - Sean H Majer
- Department of Chemistry and Chemical Biology, Baker Laboratory, Cornell University, Ithaca, New York 14853, United States
| | - Ida M DiMucci
- Department of Chemistry and Chemical Biology, Baker Laboratory, Cornell University, Ithaca, New York 14853, United States
| | - Kyle M Lancaster
- Department of Chemistry and Chemical Biology, Baker Laboratory, Cornell University, Ithaca, New York 14853, United States
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18
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Kim H, Rogler PJ, Sharma SK, Schaefer AW, Solomon EI, Karlin KD. Heme-Fe III Superoxide, Peroxide and Hydroperoxide Thermodynamic Relationships: Fe III-O 2•- Complex H-Atom Abstraction Reactivity. J Am Chem Soc 2020; 142:3104-3116. [PMID: 31913628 PMCID: PMC7034651 DOI: 10.1021/jacs.9b12571] [Citation(s) in RCA: 30] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Abstract
Establishing redox and thermodynamic relationships between metal-ion-bound O2 and its reduced (and protonated) derivatives is critically important for a full understanding of (bio)chemical processes involving dioxygen processing. Here, a ferric heme peroxide complex, [(F8)FeIII-(O22-)]- (P) (F8 = tetrakis(2,6-difluorophenyl)porphyrinate), and a superoxide complex, [(F8)FeIII-(O2•-)] (S), are shown to be redox interconvertible. Using Cr(η-C6H6)2, an equilibrium state where S and P are present is established in tetrahydrofuran (THF) at -80 °C, allowing determination of the reduction potential of S as -1.17 V vs Fc+/0. P could be protonated with 2,6-lutidinium triflate, yielding the low-spin ferric hydroperoxide species, [(F8)FeIII-(OOH)] (HP). Partial conversion of HP back to P using a derivatized phosphazene base gave a P/HP equilibrium mixture, leading to the determination of pKa = 28.8 for HP (THF, -80 °C). With the measured reduction potential and pKa, the O-H bond dissociation free energy (BDFE) of hydroperoxide species HP was calculated to be 73.5 kcal/mol, employing the thermodynamic square scheme and Bordwell relationship. This calculated O-H BDFE of HP, in fact, lines up with an experimental demonstration of the oxidizing ability of S via hydrogen atom transfer (HAT) from TEMPO-H (2,2,6,6-tetramethylpiperdine-N-hydroxide, BDFE = 66.5 kcal/mol in THF), forming the hydroperoxide species HP and TEMPO radical. Kinetic studies carried out with TEMPO-H(D) reveal second-order behavior, kH = 0.5, kD = 0.08 M-1 s-1 (THF, -80 °C); thus, the hydrogen/deuterium kinetic isotope effect (KIE) = 6, consistent with H-atom abstraction by S being the rate-determining step. This appears to be the first case where experimentally derived thermodynamics lead to a ferric heme hydroperoxide OO-H BDFE determination, that FeIII-OOH species being formed via HAT reactivity of the partner ferric heme superoxide complex.
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Affiliation(s)
- Hyun Kim
- Department of Chemistry , Johns Hopkins University , Baltimore , Maryland 21218 , United States
| | - Patrick J Rogler
- Department of Chemistry , Johns Hopkins University , Baltimore , Maryland 21218 , United States
| | - Savita K Sharma
- Department of Chemistry , Johns Hopkins University , Baltimore , Maryland 21218 , United States
| | - Andrew W Schaefer
- Department of Chemistry , Stanford University , Stanford , California 94305 , United States
| | - Edward I Solomon
- Department of Chemistry , Stanford University , Stanford , California 94305 , United States
| | - Kenneth D Karlin
- Department of Chemistry , Johns Hopkins University , Baltimore , Maryland 21218 , United States
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19
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Mani P, Devadas S, Gurusamy T, Karthik PE, Ratheesh BP, Ramanujam K, Mandal S. Sodalite-type Cu-based Three-dimensional Metal-Organic Framework for Efficient Oxygen Reduction Reaction. Chem Asian J 2019; 14:4814-4818. [PMID: 31697018 DOI: 10.1002/asia.201901242] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/04/2019] [Revised: 11/06/2019] [Indexed: 11/10/2022]
Abstract
Inspired by copper-based oxygen reduction biocatalysts, we have studied the electrocatalytic behavior of a Cu-based MOF (Cu-BTT) for oxygen reduction reaction (ORR) in alkaline medium. This catalyst reduces the oxygen at the onset (Eonset ) and half-wave potential (E1/2 ) of 0. 940 V and 0.778 V, respectively. The high halfway potential supports the good activity of Cu-BTT MOF. The high ORR catalytic activity can be interpreted by the presence of nitrogen-rich ligand (tetrazole) and the generation of nascent copper(I) during the reaction. In addition to the excellent activity, Cu-BTT MOF showed exceptional stability too, which was confirmed through chronoamperometry study, where current was unchanged up to 12 h. Further, the 4-electrons transfer of ORR kinetics was confirmed by hydrodynamic voltammetry. The oxygen active center namely copper(I) generation during ORR has been understood by the reduction peak in cyclic voltammetry as well in the XPS analysis.
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Affiliation(s)
- Prabu Mani
- School of Chemistry, Indian Institute of Science Education and Research Thiruvananthapuram, Thiruvananthapuram, Kerala, 695551, India
| | - Sharat Devadas
- School of Chemistry, Indian Institute of Science Education and Research Thiruvananthapuram, Thiruvananthapuram, Kerala, 695551, India
| | - Tamilselvi Gurusamy
- Department of Chemistry, Indian Institute of Technology Madras, Chennai, 600036, India
| | - Pitchiah Esakki Karthik
- School of Chemistry, Indian Institute of Science Education and Research Thiruvananthapuram, Thiruvananthapuram, Kerala, 695551, India
| | - Balu P Ratheesh
- School of Chemistry, Indian Institute of Science Education and Research Thiruvananthapuram, Thiruvananthapuram, Kerala, 695551, India
| | | | - Sukhendu Mandal
- School of Chemistry, Indian Institute of Science Education and Research Thiruvananthapuram, Thiruvananthapuram, Kerala, 695551, India
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20
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Kim H, Sharma SK, Schaefer AW, Solomon EI, Karlin KD. Heme-Cu Binucleating Ligand Supports Heme/O 2 and Fe II-Cu I/O 2 Reactivity Providing High- and Low-Spin Fe III-Peroxo-Cu II Complexes. Inorg Chem 2019; 58:15423-15432. [PMID: 31657921 DOI: 10.1021/acs.inorgchem.9b02521] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The focus of this study is in the description of synthetic heme/copper/O2 chemistry employing a heme-containing binucleating ligand which provides a tridentate chelate for copper ion binding. The addition of O2 (-80 °C, tetrahydrofuran (THF) solvent) to the reduced heme compound (PImH)FeII (1), gives the oxy-heme adduct, formally a heme-superoxide complex FeIII-(O2•-) (2) (resonance Raman spectroscopy (rR): νO-O, 1171 cm-1 (Δ18O2, -61 cm-1); νFe-O, 575 cm-1 (Δ18O2, -24 cm-1)). Simple warming of 2 to room temperature regenerates reduced complex 1; this reaction is reversible, as followed by UV-vis spectroscopy. Complex 2 is electron paramagnetic resonance (EPR)-silent and exhibits upfield-shifted pyrrole resonances (δ 9.12 ppm) in 2H NMR spectroscopy, indicative of a six-coordinate low-spin heme. The coordination of the tethered imidazolyl arm to the heme-superoxide complex as an axial base ligand is suggested. We also report the new fully reduced heme-copper complex [(PImH)FeIICuI]+ (3), where the copper ion is bound to the tethered tridentate portion of PImH. This reacts with O2 to give a distinctive low-temperature-stable, high-spin (S = 2, overall) peroxo-bridged complex [(PImH)FeIII-(O22-)-CuII]+ (3a): λmax, 420 (Soret), 545, 565 nm; δpyrr, 93 ppm; νO-O, 799 cm-1 (Δ18O2, -48 cm-1); νFe-O, 524 cm-1 (Δ18O2, -23 cm-1). To 3a, the addition of dicyclohexylimidazole (DCHIm), which serves as a heme axial base, leads to low-spin (S = 0 overall) species complex [(DCHIm)(PImH)FeIII-(O22-)-CuII]+ (3b): λmax, 425 (Soret), 538 nm; δpyrr, 10.2 ppm; νO-O, 817 cm-1 (Δ18O2, -55 cm-1); νFe-O, 610 cm-1 (Δ18O2, -26 cm-1). These investigations into the characterization of the O2-adducts from (PImH)FeII (1) with/without additional copper chelation advance our understanding of the dioxygen reactivity of heme-only and heme/Cu-ligand heterobinuclear system, thus potentially relevant to O2 reduction in heme-copper oxidases or fuel-cell chemistry.
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Affiliation(s)
- Hyun Kim
- Department of Chemistry , Johns Hopkins University , Baltimore , Maryland 21218 , United States
| | - Savita K Sharma
- Department of Chemistry , Johns Hopkins University , Baltimore , Maryland 21218 , United States
| | - Andrew W Schaefer
- Department of Chemistry , Stanford University , Stanford , California 94305 , United States
| | - Edward I Solomon
- Department of Chemistry , Stanford University , Stanford , California 94305 , United States
| | - Kenneth D Karlin
- Department of Chemistry , Johns Hopkins University , Baltimore , Maryland 21218 , United States
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21
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Li XX, Cho KB, Nam W. A theoretical investigation into the first-row transition metal–O2 adducts. Inorg Chem Front 2019. [DOI: 10.1039/c9qi00407f] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
Abstract
Effects of both metal center and ligand ring size on the properties of metal–O2 adducts.
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Affiliation(s)
- Xiao-Xi Li
- Department of Chemistry and Nano Science
- Ewha Womans University
- Seoul 03760
- Korea
| | - Kyung-Bin Cho
- Department of Chemistry and Nano Science
- Ewha Womans University
- Seoul 03760
- Korea
- Department of Chemistry
| | - Wonwoo Nam
- Department of Chemistry and Nano Science
- Ewha Womans University
- Seoul 03760
- Korea
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22
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Adam SM, Wijeratne GB, Rogler PJ, Diaz DE, Quist DA, Liu JJ, Karlin KD. Synthetic Fe/Cu Complexes: Toward Understanding Heme-Copper Oxidase Structure and Function. Chem Rev 2018; 118:10840-11022. [PMID: 30372042 PMCID: PMC6360144 DOI: 10.1021/acs.chemrev.8b00074] [Citation(s) in RCA: 145] [Impact Index Per Article: 24.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
Heme-copper oxidases (HCOs) are terminal enzymes on the mitochondrial or bacterial respiratory electron transport chain, which utilize a unique heterobinuclear active site to catalyze the 4H+/4e- reduction of dioxygen to water. This process involves a proton-coupled electron transfer (PCET) from a tyrosine (phenolic) residue and additional redox events coupled to transmembrane proton pumping and ATP synthesis. Given that HCOs are large, complex, membrane-bound enzymes, bioinspired synthetic model chemistry is a promising approach to better understand heme-Cu-mediated dioxygen reduction, including the details of proton and electron movements. This review encompasses important aspects of heme-O2 and copper-O2 (bio)chemistries as they relate to the design and interpretation of small molecule model systems and provides perspectives from fundamental coordination chemistry, which can be applied to the understanding of HCO activity. We focus on recent advancements from studies of heme-Cu models, evaluating experimental and computational results, which highlight important fundamental structure-function relationships. Finally, we provide an outlook for future potential contributions from synthetic inorganic chemistry and discuss their implications with relevance to biological O2-reduction.
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Affiliation(s)
- Suzanne M. Adam
- Department of Chemistry, Johns Hopkins University, Baltimore, Maryland 21218, United States
| | - Gayan B. Wijeratne
- Department of Chemistry, Johns Hopkins University, Baltimore, Maryland 21218, United States
| | - Patrick J. Rogler
- Department of Chemistry, Johns Hopkins University, Baltimore, Maryland 21218, United States
| | - Daniel E. Diaz
- Department of Chemistry, Johns Hopkins University, Baltimore, Maryland 21218, United States
| | - David A. Quist
- Department of Chemistry, Johns Hopkins University, Baltimore, Maryland 21218, United States
| | - Jeffrey J. Liu
- Department of Chemistry, Johns Hopkins University, Baltimore, Maryland 21218, United States
| | - Kenneth D. Karlin
- Department of Chemistry, Johns Hopkins University, Baltimore, Maryland 21218, United States
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23
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Nazari R, Golchoubian H, Bruno G. Chromotropism studies on copper(II) compounds. Part II. Dinuclear copper(II) complexes with triply-bridged hydroxo, acetate, and halo ligands. J COORD CHEM 2018. [DOI: 10.1080/00958972.2018.1506113] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
Affiliation(s)
- Roya Nazari
- Department of Chemistry, University of Mazandaran , Babol-sar , Iran
| | - Hamid Golchoubian
- Department of Chemistry, University of Mazandaran , Babol-sar , Iran
| | - Giuseppe Bruno
- Dipartimento di Chimica Inorganica, Università di Messina, Messina , Italy
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24
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Bhunia S, Rana A, Roy P, Martin DJ, Pegis ML, Roy B, Dey A. Rational Design of Mononuclear Iron Porphyrins for Facile and Selective 4e -/4H + O 2 Reduction: Activation of O-O Bond by 2nd Sphere Hydrogen Bonding. J Am Chem Soc 2018; 140:9444-9457. [PMID: 29975839 DOI: 10.1021/jacs.8b02983] [Citation(s) in RCA: 77] [Impact Index Per Article: 12.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Abstract
Facile and selective 4e-/4H+ electrochemical reduction of O2 to H2O in aqueous medium has been a sought-after goal for several decades. Elegant but synthetically demanding cytochrome c oxidase mimics have demonstrated selective 4e-/4H+ electrochemical O2 reduction to H2O is possible with rate constants as fast as 105 M-1 s-1 under heterogeneous conditions in aqueous media. Over the past few years, in situ mechanistic investigations on iron porphyrin complexes adsorbed on electrodes have revealed that the rate and selectivity of this multielectron and multiproton process is governed by the reactivity of a ferric hydroperoxide intermediate. The barrier of O-O bond cleavage determines the overall rate of O2 reduction and the site of protonation determines the selectivity. In this report, a series of mononuclear iron porphyrin complexes are rationally designed to achieve efficient O-O bond activation and site-selective proton transfer to effect facile and selective electrochemical reduction of O2 to water. Indeed, these crystallographically characterized complexes accomplish facile and selective reduction of O2 with rate constants >107 M-1 s-1 while retaining >95% selectivity when adsorbed on electrode surfaces (EPG) in water. These oxygen reduction reaction rate constants are 2 orders of magnitude faster than all known heme/Cu complexes and these complexes retain >90% selectivity even under rate determining electron transfer conditions that generally can only be achieved by installing additional redox active groups in the catalyst.
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Affiliation(s)
- Sarmistha Bhunia
- Department of Inorganic Chemistry , Indian Association for the Cultivation of Science , 2A Raja SC Mullick Road , Kolkata , West Bengal 700032 , India
| | - Atanu Rana
- Department of Inorganic Chemistry , Indian Association for the Cultivation of Science , 2A Raja SC Mullick Road , Kolkata , West Bengal 700032 , India
| | - Pronay Roy
- Department of Inorganic Chemistry , Indian Association for the Cultivation of Science , 2A Raja SC Mullick Road , Kolkata , West Bengal 700032 , India
| | - Daniel J Martin
- Department of Chemistry , Yale University , New Haven , Connecticut 06520 , United States
| | - Michael L Pegis
- Department of Chemistry , Yale University , New Haven , Connecticut 06520 , United States.,Department of Chemistry , Massachusetts Institute of Technology , Cambridge , Massachusetts 02139 , United States
| | - Bijan Roy
- Department of Inorganic Chemistry , Indian Association for the Cultivation of Science , 2A Raja SC Mullick Road , Kolkata , West Bengal 700032 , India
| | - Abhishek Dey
- Department of Inorganic Chemistry , Indian Association for the Cultivation of Science , 2A Raja SC Mullick Road , Kolkata , West Bengal 700032 , India
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25
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Zhang HJ, Schuppe AW, Pan ST, Chen JX, Wang BR, Newhouse TR, Yin L. Copper-Catalyzed Vinylogous Aerobic Oxidation of Unsaturated Compounds with Air. J Am Chem Soc 2018; 140:5300-5310. [DOI: 10.1021/jacs.8b01886] [Citation(s) in RCA: 27] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2023]
Affiliation(s)
- Hai-Jun Zhang
- CAS Key Laboratory of Synthetic Chemistry of Natural Substances, Center for Excellence in Molecular Synthesis, Shanghai Institute of Organic Chemistry, University of Chinese Academy of Sciences, Chinese Academy of Sciences, 345 Lingling Road, Shanghai 200032, China
| | - Alexander W. Schuppe
- Department of Chemistry, Yale University, 225 Prospect Street, New Haven, Connecticut 06520-8107, United States
| | - Shi-Tao Pan
- CAS Key Laboratory of Synthetic Chemistry of Natural Substances, Center for Excellence in Molecular Synthesis, Shanghai Institute of Organic Chemistry, University of Chinese Academy of Sciences, Chinese Academy of Sciences, 345 Lingling Road, Shanghai 200032, China
| | - Jin-Xiang Chen
- CAS Key Laboratory of Synthetic Chemistry of Natural Substances, Center for Excellence in Molecular Synthesis, Shanghai Institute of Organic Chemistry, University of Chinese Academy of Sciences, Chinese Academy of Sciences, 345 Lingling Road, Shanghai 200032, China
| | - Bo-Ran Wang
- CAS Key Laboratory of Synthetic Chemistry of Natural Substances, Center for Excellence in Molecular Synthesis, Shanghai Institute of Organic Chemistry, University of Chinese Academy of Sciences, Chinese Academy of Sciences, 345 Lingling Road, Shanghai 200032, China
| | - Timothy R. Newhouse
- Department of Chemistry, Yale University, 225 Prospect Street, New Haven, Connecticut 06520-8107, United States
| | - Liang Yin
- CAS Key Laboratory of Synthetic Chemistry of Natural Substances, Center for Excellence in Molecular Synthesis, Shanghai Institute of Organic Chemistry, University of Chinese Academy of Sciences, Chinese Academy of Sciences, 345 Lingling Road, Shanghai 200032, China
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26
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Huang X, Groves JT. Oxygen Activation and Radical Transformations in Heme Proteins and Metalloporphyrins. Chem Rev 2018; 118:2491-2553. [PMID: 29286645 PMCID: PMC5855008 DOI: 10.1021/acs.chemrev.7b00373] [Citation(s) in RCA: 591] [Impact Index Per Article: 98.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/21/2017] [Indexed: 12/20/2022]
Abstract
As a result of the adaptation of life to an aerobic environment, nature has evolved a panoply of metalloproteins for oxidative metabolism and protection against reactive oxygen species. Despite the diverse structures and functions of these proteins, they share common mechanistic grounds. An open-shell transition metal like iron or copper is employed to interact with O2 and its derived intermediates such as hydrogen peroxide to afford a variety of metal-oxygen intermediates. These reactive intermediates, including metal-superoxo, -(hydro)peroxo, and high-valent metal-oxo species, are the basis for the various biological functions of O2-utilizing metalloproteins. Collectively, these processes are called oxygen activation. Much of our understanding of the reactivity of these reactive intermediates has come from the study of heme-containing proteins and related metalloporphyrin compounds. These studies not only have deepened our understanding of various functions of heme proteins, such as O2 storage and transport, degradation of reactive oxygen species, redox signaling, and biological oxygenation, etc., but also have driven the development of bioinorganic chemistry and biomimetic catalysis. In this review, we survey the range of O2 activation processes mediated by heme proteins and model compounds with a focus on recent progress in the characterization and reactivity of important iron-oxygen intermediates. Representative reactions initiated by these reactive intermediates as well as some context from prior decades will also be presented. We will discuss the fundamental mechanistic features of these transformations and delineate the underlying structural and electronic factors that contribute to the spectrum of reactivities that has been observed in nature as well as those that have been invented using these paradigms. Given the recent developments in biocatalysis for non-natural chemistries and the renaissance of radical chemistry in organic synthesis, we envision that new enzymatic and synthetic transformations will emerge based on the radical processes mediated by metalloproteins and their synthetic analogs.
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Affiliation(s)
- Xiongyi Huang
- Department
of Chemistry, Princeton University, Princeton, New Jersey 08544, United States
- Department
of Chemistry, California Institute of Technology, Pasadena, California 91125, United States
| | - John T. Groves
- Department
of Chemistry, Princeton University, Princeton, New Jersey 08544, United States
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27
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Kitagishi H, Shimoji D, Ohta T, Kamiya R, Kudo Y, Onoda A, Hayashi T, Weiss J, Wytko JA, Kano K. A water-soluble supramolecular complex that mimics the heme/copper hetero-binuclear site of cytochrome c oxidase. Chem Sci 2018; 9:1989-1995. [PMID: 29675246 PMCID: PMC5892347 DOI: 10.1039/c7sc04732k] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2017] [Accepted: 01/12/2018] [Indexed: 01/16/2023] Open
Abstract
The O2 adduct of an aqueous synthetic heme/copper model system built on a porphyrin/cyclodextrin supramolecular complex has been characterized.
In mitochondria, cytochrome c oxidase (CcO) catalyses the reduction of oxygen (O2) to water by using a heme/copper hetero-binuclear active site. Here we report a highly efficient supramolecular approach for the construction of a water-soluble biomimetic model for the active site of CcO. A tridentate copper(ii) complex was fixed onto 5,10,15,20-tetrakis(4-sulfonatophenyl)porphinatoiron(iii) (FeIIITPPS) through supramolecular complexation between FeIIITPPS and a per-O-methylated β-cyclodextrin dimer linked by a (2,2′:6′,2′′-terpyridyl)copper(ii) complex (CuIITerpyCD2). The reduced FeIITPPS/CuITerpyCD2 complex reacted with O2 in an aqueous solution at pH 7 and 25 °C to form a superoxo-type FeIII–O2–/CuI complex in a manner similar to CcO. The pH-dependent autoxidation of the O2 complex suggests that water molecules gathered at the distal Cu site are possibly involved in the FeIII–O2–/CuI superoxo complex in an aqueous solution. Electrochemical analysis using a rotating disk electrode demonstrated the role of the FeTPPS/CuTerpyCD2 hetero-binuclear structure in the catalytic O2 reduction reaction.
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Affiliation(s)
- Hiroaki Kitagishi
- Department of Molecular Chemistry and Biochemistry , Faculty of Science and Engineering , Doshisha University , Kyotanabe , Kyoto 610-0321 , Japan .
| | - Daiki Shimoji
- Department of Molecular Chemistry and Biochemistry , Faculty of Science and Engineering , Doshisha University , Kyotanabe , Kyoto 610-0321 , Japan .
| | - Takehiro Ohta
- Picobiology Institute , Graduate School of Life Science , University of Hyogo , RSC-UH LP Center , Hyogo 679-5148 , Japan
| | - Ryo Kamiya
- Department of Molecular Chemistry and Biochemistry , Faculty of Science and Engineering , Doshisha University , Kyotanabe , Kyoto 610-0321 , Japan .
| | - Yasuhiro Kudo
- Department of Molecular Chemistry and Biochemistry , Faculty of Science and Engineering , Doshisha University , Kyotanabe , Kyoto 610-0321 , Japan .
| | - Akira Onoda
- Department of Applied Chemistry , Graduate School of Engineering , Osaka University , 2-1 Yamadaoka , Suita 565-0871 , Japan
| | - Takashi Hayashi
- Department of Applied Chemistry , Graduate School of Engineering , Osaka University , 2-1 Yamadaoka , Suita 565-0871 , Japan
| | - Jean Weiss
- Institut de Chimie de Strasbourg , UMR 7177 , CNRS , Université de Strasbourg , 4 Rue Blaise Pascal , 67000 Strasbourg , France
| | - Jennifer A Wytko
- Institut de Chimie de Strasbourg , UMR 7177 , CNRS , Université de Strasbourg , 4 Rue Blaise Pascal , 67000 Strasbourg , France
| | - Koji Kano
- Department of Molecular Chemistry and Biochemistry , Faculty of Science and Engineering , Doshisha University , Kyotanabe , Kyoto 610-0321 , Japan .
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Vorburger P, Lo M, Choua S, Bernard M, Melin F, Oueslati N, Boudon C, Elhabiri M, Wytko JA, Hellwig P, Weiss J. A question of flexibility in cytochrome c oxidase models. Inorganica Chim Acta 2017. [DOI: 10.1016/j.ica.2017.04.052] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
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Jasniewski AJ, Komor AJ, Lipscomb JD, Que L. Unprecedented (μ-1,1-Peroxo)diferric Structure for the Ambiphilic Orange Peroxo Intermediate of the Nonheme N-Oxygenase CmlI. J Am Chem Soc 2017; 139:10472-10485. [PMID: 28673082 PMCID: PMC5568637 DOI: 10.1021/jacs.7b05389] [Citation(s) in RCA: 39] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The final step in the biosynthesis of the antibiotic chloramphenicol is the oxidation of an aryl-amine substrate to an aryl-nitro product catalyzed by the N-oxygenase CmlI in three two-electron steps. The CmlI active site contains a diiron cluster ligated by three histidine and four glutamate residues and activates dioxygen to perform its role in the biosynthetic pathway. It was previously shown that the active oxidant used by CmlI to facilitate this chemistry is a peroxo-diferric intermediate (CmlIP). Spectroscopic characterization demonstrated that the peroxo binding geometry of CmlIP is not consistent with the μ-1,2 mode commonly observed in nonheme diiron systems. Its geometry was tentatively assigned as μ-η2:η1 based on comparison with resonance Raman (rR) features of mixed-metal model complexes in the absence of appropriate diiron models. Here, X-ray absorption spectroscopy (XAS) and rR studies have been used to establish a refined structure for the diferric cluster of CmlIP. The rR experiments carried out with isotopically labeled water identified the symmetric and asymmetric vibrations of an Fe-O-Fe unit in the active site at 485 and 780 cm-1, respectively, which was confirmed by the 1.83 Å Fe-O bond observed by XAS. In addition, a unique Fe···O scatterer at 2.82 Å observed from XAS analysis is assigned as arising from the distal O atom of a μ-1,1-peroxo ligand that is bound symmetrically between the irons. The (μ-oxo)(μ-1,1-peroxo)diferric core structure associated with CmlIP is unprecedented among diiron cluster-containing enzymes and corresponding biomimetic complexes. Importantly, it allows the peroxo-diferric intermediate to be ambiphilic, acting as an electrophilic oxidant in the initial N-hydroxylation of an arylamine and then becoming a nucleophilic oxidant in the final oxidation of an aryl-nitroso intermediate to the aryl-nitro product.
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Affiliation(s)
- Andrew J. Jasniewski
- Department of Chemistry, University of Minnesota, Minneapolis, Minnesota 55455
- Center for Metals in Biocatalysis, University of Minnesota, Minneapolis, Minnesota 55455
| | - Anna J. Komor
- Department of Chemistry, University of Minnesota, Minneapolis, Minnesota 55455
- Center for Metals in Biocatalysis, University of Minnesota, Minneapolis, Minnesota 55455
| | - John D. Lipscomb
- Department of Biochemistry, Molecular Biology, and Biophysics, University of Minnesota, Minneapolis, Minnesota 55455
- Center for Metals in Biocatalysis, University of Minnesota, Minneapolis, Minnesota 55455
| | - Lawrence Que
- Department of Chemistry, University of Minnesota, Minneapolis, Minnesota 55455
- Center for Metals in Biocatalysis, University of Minnesota, Minneapolis, Minnesota 55455
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30
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Schaefer AW, Kieber-Emmons MT, Adam SM, Karlin KD, Solomon EI. Phenol-Induced O-O Bond Cleavage in a Low-Spin Heme-Peroxo-Copper Complex: Implications for O 2 Reduction in Heme-Copper Oxidases. J Am Chem Soc 2017; 139:7958-7973. [PMID: 28521498 PMCID: PMC5605297 DOI: 10.1021/jacs.7b03292] [Citation(s) in RCA: 40] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
Abstract
This study evaluates the reaction of a biomimetic heme-peroxo-copper complex, {[(DCHIm)(F8)FeIII]-(O22-)-[CuII(AN)]}+ (1), with a phenolic substrate, involving a net H-atom abstraction to cleave the bridging peroxo O-O bond that produces FeIV═O, CuII-OH, and phenoxyl radical moieties, analogous to the chemistry carried out in heme-copper oxidases (HCOs). A 3D potential energy surface generated for this reaction reveals two possible reaction pathways: one involves nearly complete proton transfer (PT) from the phenol to the peroxo ligand before the barrier; the other involves O-O homolysis, where the phenol remains H-bonding to the peroxo OCu in the transition state (TS) and transfers the H+ after the barrier. In both mechanisms, electron transfer (ET) from phenol occurs after the PT (and after the barrier); therefore, only the interaction with the H+ is involved in lowering the O-O cleavage barrier. The relative barriers depend on covalency (which governs ET from Fe), and therefore vary with DFT functional. However, as these mechanisms differ by the amount of PT at the TS, kinetic isotope experiments were conducted to determine which mechanism is active. It is found that the phenolic proton exhibits a secondary kinetic isotope effect, consistent with the calculations for the H-bonded O-O homolysis mechanism. The consequences of these findings are discussed in relation to O-O cleavage in HCOs, supporting a model in which a peroxo intermediate serves as the active H+ acceptor, and both the H+ and e- required for O-O cleavage derive from the cross-linked Tyr residue present at the active site.
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Affiliation(s)
- Andrew W Schaefer
- Department of Chemistry, Stanford University , Stanford, California 94305, United States
| | - Matthew T Kieber-Emmons
- Department of Chemistry, Stanford University , Stanford, California 94305, United States
- Department of Chemistry, The University of Utah , Salt Lake City, Utah 84112, United States
| | - Suzanne M Adam
- Department of Chemistry, The Johns Hopkins University , Baltimore, Maryland 21218, United States
| | - Kenneth D Karlin
- Department of Chemistry, The Johns Hopkins University , Baltimore, Maryland 21218, United States
| | - Edward I Solomon
- Department of Chemistry, Stanford University , Stanford, California 94305, United States
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31
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Elwell CE, Gagnon NL, Neisen BD, Dhar D, Spaeth AD, Yee GM, Tolman WB. Copper-Oxygen Complexes Revisited: Structures, Spectroscopy, and Reactivity. Chem Rev 2017; 117:2059-2107. [PMID: 28103018 PMCID: PMC5963733 DOI: 10.1021/acs.chemrev.6b00636] [Citation(s) in RCA: 459] [Impact Index Per Article: 65.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Abstract
A longstanding research goal has been to understand the nature and role of copper-oxygen intermediates within copper-containing enzymes and abiological catalysts. Synthetic chemistry has played a pivotal role in highlighting the viability of proposed intermediates and expanding the library of known copper-oxygen cores. In addition to the number of new complexes that have been synthesized since the previous reviews on this topic in this journal (Mirica, L. M.; Ottenwaelder, X.; Stack, T. D. P. Chem. Rev. 2004, 104, 1013-1046 and Lewis, E. A.; Tolman, W. B. Chem. Rev. 2004, 104, 1047-1076), the field has seen significant expansion in the (1) range of cores synthesized and characterized, (2) amount of mechanistic work performed, particularly in the area of organic substrate oxidation, and (3) use of computational methods for both the corroboration and prediction of proposed intermediates. The scope of this review has been limited to well-characterized examples of copper-oxygen species but seeks to provide a thorough picture of the spectroscopic characteristics and reactivity trends of the copper-oxygen cores discussed.
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Affiliation(s)
- Courtney E Elwell
- Department of Chemistry, Center for Metals in Biocatalysis, University of Minnesota , 207 Pleasant St. SE, Minneapolis, Minnesota 55455, United States
| | - Nicole L Gagnon
- Department of Chemistry, Center for Metals in Biocatalysis, University of Minnesota , 207 Pleasant St. SE, Minneapolis, Minnesota 55455, United States
| | - Benjamin D Neisen
- Department of Chemistry, Center for Metals in Biocatalysis, University of Minnesota , 207 Pleasant St. SE, Minneapolis, Minnesota 55455, United States
| | - Debanjan Dhar
- Department of Chemistry, Center for Metals in Biocatalysis, University of Minnesota , 207 Pleasant St. SE, Minneapolis, Minnesota 55455, United States
| | - Andrew D Spaeth
- Department of Chemistry, Center for Metals in Biocatalysis, University of Minnesota , 207 Pleasant St. SE, Minneapolis, Minnesota 55455, United States
| | - Gereon M Yee
- Department of Chemistry, Center for Metals in Biocatalysis, University of Minnesota , 207 Pleasant St. SE, Minneapolis, Minnesota 55455, United States
| | - William B Tolman
- Department of Chemistry, Center for Metals in Biocatalysis, University of Minnesota , 207 Pleasant St. SE, Minneapolis, Minnesota 55455, United States
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Qiu J, Spano TL, Dembowski M, Kokot AM, Szymanowski JES, Burns PC. Sulfate-Centered Sodium-Icosahedron-Templated Uranyl Peroxide Phosphate Cages with Uranyl Bridged by μ–η1:η2 Peroxide. Inorg Chem 2017; 56:1874-1880. [DOI: 10.1021/acs.inorgchem.6b02429] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Jie Qiu
- Department
of Civil and Environmental Engineering and Earth Sciences and ‡Department of
Chemistry and Biochemistry, University of Notre Dame, Notre Dame, Indiana 46556, United States
| | - Tyler L. Spano
- Department
of Civil and Environmental Engineering and Earth Sciences and ‡Department of
Chemistry and Biochemistry, University of Notre Dame, Notre Dame, Indiana 46556, United States
| | - Mateusz Dembowski
- Department
of Civil and Environmental Engineering and Earth Sciences and ‡Department of
Chemistry and Biochemistry, University of Notre Dame, Notre Dame, Indiana 46556, United States
| | - Alex M. Kokot
- Department
of Civil and Environmental Engineering and Earth Sciences and ‡Department of
Chemistry and Biochemistry, University of Notre Dame, Notre Dame, Indiana 46556, United States
| | - Jennifer E. S. Szymanowski
- Department
of Civil and Environmental Engineering and Earth Sciences and ‡Department of
Chemistry and Biochemistry, University of Notre Dame, Notre Dame, Indiana 46556, United States
| | - Peter C. Burns
- Department
of Civil and Environmental Engineering and Earth Sciences and ‡Department of
Chemistry and Biochemistry, University of Notre Dame, Notre Dame, Indiana 46556, United States
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Adam SM, Garcia-Bosch I, Schaefer AW, Sharma SK, Siegler MA, Solomon EI, Karlin KD. Critical Aspects of Heme-Peroxo-Cu Complex Structure and Nature of Proton Source Dictate Metal-O(peroxo) Breakage versus Reductive O-O Cleavage Chemistry. J Am Chem Soc 2017; 139:472-481. [PMID: 28029788 PMCID: PMC5274545 DOI: 10.1021/jacs.6b11322] [Citation(s) in RCA: 32] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Abstract
The 4H+/4e- reduction of O2 to water, a key fuel-cell reaction also carried out in biology by oxidase enzymes, includes the critical O-O bond reductive cleavage step. Mechanistic investigations on active-site model compounds, which are synthesized by rational design to incorporate systematic variations, can focus on and resolve answers to fundamental questions, including protonation and/or H-bonding aspects, which accompany electron transfer. Here, we describe the nature and comparative reactivity of two low-spin heme-peroxo-Cu complexes, LS-4DCHIm, [(DCHIm)F8FeIII-(O22-)-CuII(DCHIm)4]+, and LS-3DCHIm, [(DCHIm)F8FeIII-(O22-)-CuII(DCHIm)3]+ (F8 = tetrakis(2,6-difluorophenyl)-porphyrinate; DCHIm = 1,5-dicyclohexylimidazole), toward different proton (4-nitrophenol and [DMF·H+](CF3SO3-)) (DMF = dimethyl-formamide) or electron (decamethylferrocene (Fc*)) sources. Spectroscopic reactivity studies show that differences in structure and electronic properties of LS-3DCHIm and LS-4DCHIm lead to significant differences in behavior. LS-3DCHIm is resistant to reduction, is unreactive toward weakly acidic 4-NO2-phenol, and stronger acids cleave the metal-O bonds, releasing H2O2. By contrast, LS-4DCHIm forms an adduct with 4-NO2-phenol, which includes an H-bond to the peroxo O-atom distal to Fe (resonance Raman (rR) spectroscopy and DFT). With addition of Fc* (2 equiv overall required), O-O reductive cleavage occurs, giving water, Fe(III), and Cu(II) products; however, a kinetic study reveals a one-electron rate-determining process, ket = 1.6 M-1 s-1 (-90 °C). The intermediacy of a high-valent [(DCHIm)F8FeIV═O] species is thus implied, and separate experiments show that one-electron reduction-protonation of [(DCHIm)F8FeIV═O] occurs faster (ket2 = 5.0 M-1 s-1), consistent with the overall postulated mechanism. The importance of the H-bonding interaction as a prerequisite for reductive cleavage is highlighted.
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Affiliation(s)
- Suzanne M. Adam
- Johns Hopkins University, Baltimore, Maryland 21218, United States
| | | | - Andrew W. Schaefer
- Department of Chemistry, Stanford University, Stanford, California 94305, United States
| | - Savita K. Sharma
- Johns Hopkins University, Baltimore, Maryland 21218, United States
| | | | - Edward I. Solomon
- Department of Chemistry, Stanford University, Stanford, California 94305, United States
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Bae SH, Lee Y, Fukuzumi S, Nam W. Fine Control of the Redox Reactivity of a Nonheme Iron(III)–Peroxo Complex by Binding Redox‐Inactive Metal Ions. Angew Chem Int Ed Engl 2016; 56:801-805. [DOI: 10.1002/anie.201610828] [Citation(s) in RCA: 39] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/06/2016] [Indexed: 11/08/2022]
Affiliation(s)
- Seong Hee Bae
- Department of Chemistry and Nano Science Ewha Womans University Seoul 03760 Korea
| | - Yong‐Min Lee
- Department of Chemistry and Nano Science Ewha Womans University Seoul 03760 Korea
| | - Shunichi Fukuzumi
- Department of Chemistry and Nano Science Ewha Womans University Seoul 03760 Korea
- Faculty of Science and Engineering, SENTAN (Japan) Science and Technology Agency (JST) Meijo University Nagoya Aichi 468-8502 Japan
| | - Wonwoo Nam
- Department of Chemistry and Nano Science Ewha Womans University Seoul 03760 Korea
- State Key Laboratory for Oxo Synthesis and Selective Oxidation Lanzhou Institute of Chemical Physics, Chinese Academy of Sciences Lanzhou 730000 China
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Bae SH, Lee Y, Fukuzumi S, Nam W. Fine Control of the Redox Reactivity of a Nonheme Iron(III)–Peroxo Complex by Binding Redox‐Inactive Metal Ions. Angew Chem Int Ed Engl 2016. [DOI: 10.1002/ange.201610828] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Seong Hee Bae
- Department of Chemistry and Nano Science Ewha Womans University Seoul 03760 Korea
| | - Yong‐Min Lee
- Department of Chemistry and Nano Science Ewha Womans University Seoul 03760 Korea
| | - Shunichi Fukuzumi
- Department of Chemistry and Nano Science Ewha Womans University Seoul 03760 Korea
- Faculty of Science and Engineering, SENTAN (Japan) Science and Technology Agency (JST) Meijo University Nagoya Aichi 468-8502 Japan
| | - Wonwoo Nam
- Department of Chemistry and Nano Science Ewha Womans University Seoul 03760 Korea
- State Key Laboratory for Oxo Synthesis and Selective Oxidation Lanzhou Institute of Chemical Physics, Chinese Academy of Sciences Lanzhou 730000 China
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Mase K, Aoi S, Ohkubo K, Fukuzumi S. Catalytic reduction of proton, oxygen and carbon dioxide with cobalt macrocyclic complexes. J PORPHYR PHTHALOCYA 2016. [DOI: 10.1142/s1088424616300111] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
The conversion of solar energy into chemical energy by the reduction of small molecules provides a promising solution for the effective energy storage and transport. In this manuscript, we have highlighted our recent researches on the catalysis of cobalt-macrocycle complexes for the reduction of O2, proton and CO2. We have successfully clarified the reaction mechanisms of catalytic O2 reduction with cobalt phthalocyanine (Co[Formula: see text](Pc)) and cobalt chlorin (Co[Formula: see text](Ch)) based on detailed kinetic study under homogeneous conditions. The presence of proton-accepting moieties on these macrocyclic ligands enhances the electron-accepting ability, leading to the efficient catalytic two-electron reduction of O2 to produce hydrogen peroxide (H2O[Formula: see text] with high stability and less overpotential in acidic solutions. When Co[Formula: see text](Ch) is adsorbed on multi-walled carbon nanotubes (MWCNTs) and employed as an electrocatalyst, CO2 was successfully reduced to form CO with a Faradaic efficiency of 89% at an applied potential of -1.1 V vs. NHE in an aqueous solution. Finally, photocatalytic H2 evolution was attained from ascorbic acid with Co[Formula: see text](Ch) as a catalyst and [Ru(bpy)3][Formula: see text] (bpy [Formula: see text] 2,2[Formula: see text]-bipyridine) as a photocatalyst via a one-photon two-electron process.
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Affiliation(s)
- Kentaro Mase
- Department of Material and Life Science, Graduate School of Engineering, Osaka University, Suita, Osaka 565-0871, Japan
| | - Shoko Aoi
- Department of Material and Life Science, Graduate School of Engineering, Osaka University, Suita, Osaka 565-0871, Japan
| | - Kei Ohkubo
- Department of Material and Life Science, Graduate School of Engineering, Osaka University, Suita, Osaka 565-0871, Japan
- Division of Innovative Research for Drug Design, Institute of Academic Initiatives, Osaka University, Suita, Osaka 565-0871, Japan
- Department of Chemistry and Nano Science, Ewha Womans University, Seoul 120-750, Korea
| | - Shunichi Fukuzumi
- Department of Chemistry and Nano Science, Ewha Womans University, Seoul 120-750, Korea
- Faculty of Science and Engineering, Meijo University, SENTAN, Japan Science and Technology Agency (JST), Nagoya, Aichi 468-0073, Japan
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Zhang W, Lai W, Cao R. Energy-Related Small Molecule Activation Reactions: Oxygen Reduction and Hydrogen and Oxygen Evolution Reactions Catalyzed by Porphyrin- and Corrole-Based Systems. Chem Rev 2016; 117:3717-3797. [PMID: 28222601 DOI: 10.1021/acs.chemrev.6b00299] [Citation(s) in RCA: 698] [Impact Index Per Article: 87.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
Abstract
Globally increasing energy demands and environmental concerns related to the use of fossil fuels have stimulated extensive research to identify new energy systems and economies that are sustainable, clean, low cost, and environmentally benign. Hydrogen generation from solar-driven water splitting is a promising strategy to store solar energy in chemical bonds. The subsequent combustion of hydrogen in fuel cells produces electric energy, and the only exhaust is water. These two reactions compose an ideal process to provide clean and sustainable energy. In such a process, a hydrogen evolution reaction (HER), an oxygen evolution reaction (OER) during water splitting, and an oxygen reduction reaction (ORR) as a fuel cell cathodic reaction are key steps that affect the efficiency of the overall energy conversion. Catalysts play key roles in this process by improving the kinetics of these reactions. Porphyrin-based and corrole-based systems are versatile and can efficiently catalyze the ORR, OER, and HER. Because of the significance of energy-related small molecule activation, this review covers recent progress in hydrogen evolution, oxygen evolution, and oxygen reduction reactions catalyzed by porphyrins and corroles.
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Affiliation(s)
- Wei Zhang
- Key Laboratory of Applied Surface and Colloid Chemistry, Ministry of Education, School of Chemistry and Chemical Engineering, Shaanxi Normal University , Xi'an 710119, China
| | - Wenzhen Lai
- Department of Chemistry, Renmin University of China , Beijing 100872, China
| | - Rui Cao
- Key Laboratory of Applied Surface and Colloid Chemistry, Ministry of Education, School of Chemistry and Chemical Engineering, Shaanxi Normal University , Xi'an 710119, China.,Department of Chemistry, Renmin University of China , Beijing 100872, China
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Sharma SK, Kim H, Rogler PJ, A Siegler M, Karlin KD. Isocyanide or nitrosyl complexation to hemes with varying tethered axial base ligand donors: synthesis and characterization. J Biol Inorg Chem 2016; 21:729-43. [PMID: 27350154 PMCID: PMC5003086 DOI: 10.1007/s00775-016-1369-4] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/06/2016] [Accepted: 06/08/2016] [Indexed: 01/08/2023]
Abstract
A series of ferrous-heme 2,6-dimethylphenyl isocyanide (DIMPI) and ferrous-heme mononitrosyl complexes have been synthesized and characterized. The heme portion of the complexes studied is varied with respect to the nature of the axial ligand, including complexes, where it is covalently tethered to the porphyrinate periphery. Reduced heme complexes, [(F8)Fe(II)], [(P(Py))Fe(II)], [(P(Im))Fe(II)], and [(P(ImH))Fe(II)], where F8 = tetrakis(2,6-difluorophenyl)-porphyrinate and P(Py), P(Im), and P(ImH) are partially fluorinated tetraaryl porphyrinates with covalently appended axial base pyridyl/imidazolyl or histamine moieties, were employed; P(ImH) is a new construct. Room temperature addition of DIMPI to these iron(II) complexes affords the bis-isocyanide species [(F8)Fe(II)-(DIMPI)2] in the case of [(F8)Fe(II)], while for the other hemes, mono-DIMPI compounds are obtained, [(P(Py))Fe(II)-(DIMPI)] [(2)-DIMPI], [(P(Im))Fe(II)-(DIMPI)] [(3)-DIMPI], and [(P(ImH))Fe(II)-(DIMPI)] [(4)-DIMPI]. The structures of complexes (3)-DIMPI and (4)-DIMPI have been determined by single crystal X-ray crystallography, where interesting H…F(porphryinate aryl group) interactions are observed. (19)F-NMR spectra determined for these complexes suggest that H…F(porphyrinate aryl groups) attractions also occur in solution, the H atom coming either from the DIMPI methyl groups or from a porphyinate axial base imidazole or porphyrinate pyrrole. Similarly, we have used nitrogen monoxide to generate ferrous-nitrosyl complexes, a five-coordinate species for F8, [(F8)Fe(II)-(NO)], or low-spin six-coordinate compounds [(P(Py))Fe(II)-(NO)], [(P(Im))Fe(II)-(NO)], and [(P(ImH))Fe(II)-(NO)]. The DIMPI and mononitrosyl complexes have also been characterized using UV-Vis, IR, (1)H-NMR, and EPR spectroscopies.
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Affiliation(s)
- Savita K Sharma
- Department of Chemistry, The Johns Hopkins University, Baltimore, MD, 21218, USA
| | - Hyun Kim
- Department of Chemistry, The Johns Hopkins University, Baltimore, MD, 21218, USA
| | - Patrick J Rogler
- Department of Chemistry, The Johns Hopkins University, Baltimore, MD, 21218, USA
| | - Maxime A Siegler
- Department of Chemistry, The Johns Hopkins University, Baltimore, MD, 21218, USA
| | - Kenneth D Karlin
- Department of Chemistry, The Johns Hopkins University, Baltimore, MD, 21218, USA.
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Sil D, Khan FST, Rath SP. Effect of Inter-Porphyrin Distance on Spin-State in Diiron(III) μ-Hydroxo Bisporphyrins. Chemistry 2016; 22:14585-97. [DOI: 10.1002/chem.201602018] [Citation(s) in RCA: 30] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/29/2016] [Indexed: 12/16/2022]
Affiliation(s)
- Debangsu Sil
- Department of Chemistry; Indian Institute of Technology Kanpur; Kanpur- 208016 India
| | | | - Sankar Prasad Rath
- Department of Chemistry; Indian Institute of Technology Kanpur; Kanpur- 208016 India
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40
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Zhang S, Fallah H, Gardner EJ, Kundu S, Bertke JA, Cundari TR, Warren TH. A Dinitrogen Dicopper(I) Complex via a Mixed‐Valence Dicopper Hydride. Angew Chem Int Ed Engl 2016; 55:9927-31. [DOI: 10.1002/anie.201603970] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/24/2016] [Revised: 06/14/2016] [Indexed: 11/07/2022]
Affiliation(s)
- Shiyu Zhang
- Department of Chemistry Georgetown University Box 571227 Washington DC 20057-1227 USA
| | - Hengameh Fallah
- Department of Chemistry, Center for Advanced Scientific Computing and Modeling (CASCaM) University of North Texas Denton TX 76203 USA
| | - Evan J. Gardner
- Department of Chemistry Georgetown University Box 571227 Washington DC 20057-1227 USA
| | - Subrata Kundu
- Department of Chemistry Georgetown University Box 571227 Washington DC 20057-1227 USA
| | - Jeffery A. Bertke
- Department of Chemistry Georgetown University Box 571227 Washington DC 20057-1227 USA
| | - Thomas R. Cundari
- Department of Chemistry, Center for Advanced Scientific Computing and Modeling (CASCaM) University of North Texas Denton TX 76203 USA
| | - Timothy H. Warren
- Department of Chemistry Georgetown University Box 571227 Washington DC 20057-1227 USA
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41
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Zhang S, Fallah H, Gardner EJ, Kundu S, Bertke JA, Cundari TR, Warren TH. A Dinitrogen Dicopper(I) Complex via a Mixed‐Valence Dicopper Hydride. Angew Chem Int Ed Engl 2016. [DOI: 10.1002/ange.201603970] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Shiyu Zhang
- Department of Chemistry Georgetown University Box 571227 Washington DC 20057-1227 USA
| | - Hengameh Fallah
- Department of Chemistry, Center for Advanced Scientific Computing and Modeling (CASCaM) University of North Texas Denton TX 76203 USA
| | - Evan J. Gardner
- Department of Chemistry Georgetown University Box 571227 Washington DC 20057-1227 USA
| | - Subrata Kundu
- Department of Chemistry Georgetown University Box 571227 Washington DC 20057-1227 USA
| | - Jeffery A. Bertke
- Department of Chemistry Georgetown University Box 571227 Washington DC 20057-1227 USA
| | - Thomas R. Cundari
- Department of Chemistry, Center for Advanced Scientific Computing and Modeling (CASCaM) University of North Texas Denton TX 76203 USA
| | - Timothy H. Warren
- Department of Chemistry Georgetown University Box 571227 Washington DC 20057-1227 USA
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42
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Ohta T, Liu JG, Nagaraju P, Ogura T, Naruta Y. A cryo-generated ferrous-superoxo porphyrin: EPR, resonance Raman and DFT studies. Chem Commun (Camb) 2016; 51:12407-10. [PMID: 26144219 DOI: 10.1039/c5cc03520a] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The resonance Raman analysis of cryo-generated ferrous-superoxy heme has been performed for the first time, and its structure and the reaction mechanism are rationalized by DFT calculations. The presence of another electronic tautomer of ferrous-superoxy heme is predicted computationally.
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Affiliation(s)
- Takehiro Ohta
- Picobiology Institute, Graduate School of Life Science, University of Hyogo, Hyogo 679-5148, Japan.
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43
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Tsang ASK, Kapat A, Schoenebeck F. Factors That Control C–C Cleavage versus C–H Bond Hydroxylation in Copper-Catalyzed Oxidations of Ketones with O2. J Am Chem Soc 2016; 138:518-26. [DOI: 10.1021/jacs.5b08347] [Citation(s) in RCA: 126] [Impact Index Per Article: 15.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Affiliation(s)
- Althea S.-K. Tsang
- Institute of Organic Chemistry, RWTH Aachen University, Landoltweg 1, 52074 Aachen, Germany
| | - Ajoy Kapat
- Institute of Organic Chemistry, RWTH Aachen University, Landoltweg 1, 52074 Aachen, Germany
| | - Franziska Schoenebeck
- Institute of Organic Chemistry, RWTH Aachen University, Landoltweg 1, 52074 Aachen, Germany
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44
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Ozarowski A, Calzado CJ, Sharma RP, Kumar S, Jezierska J, Angeli C, Spizzo F, Ferretti V. Metal–Metal Interactions in Trinuclear Copper(II) Complexes [Cu3(RCOO)4(H2TEA)2] and Binuclear [Cu2(RCOO)2(H2TEA)2]. Syntheses and Combined Structural, Magnetic, High-Field Electron Paramagnetic Resonance, and Theoretical Studies. Inorg Chem 2015; 54:11916-34. [DOI: 10.1021/acs.inorgchem.5b02199] [Citation(s) in RCA: 46] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Andrew Ozarowski
- National High Magnetic Field Laboratory, Florida State University, Tallahassee, Florida 32310, United States
| | - Carmen J. Calzado
- Departamento de Química Física, Universidad de Sevilla, c/Prof. García González, s/n, 41012 Sevilla, Spain
| | - Raj Pal Sharma
- Department of Chemistry, Panjab University, Chandigarh 160014, India
| | - Santosh Kumar
- Department of Chemistry, Panjab University, Chandigarh 160014, India
| | - Julia Jezierska
- Faculty of Chemistry, Wroclaw University, 14 F. Joliot Curie Str., 50-383 Wroclaw, Poland
| | | | - Federico Spizzo
- Dipartimento di Fisica e Scienze della Terra, Università di Ferrara, Via Saragat 1, I-44122 Ferrara, Italy
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45
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Bimetallic Fe–Cu Carbido Carbonyl Clusters Obtained from the Reactions of [Fe4C(CO)12{Cu(MeCN)}2] with N-Donor Ligands. J CLUST SCI 2015. [DOI: 10.1007/s10876-015-0939-x] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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46
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Zhou A, Kleespies ST, Van Heuvelen KM, Que L. Characterization of a heterobimetallic nonheme Fe(III)-O-Cr(III) species formed by O2 activation. Chem Commun (Camb) 2015; 51:14326-9. [PMID: 26265081 PMCID: PMC4567504 DOI: 10.1039/c5cc05931c] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
We report the generation and spectroscopic characterization of a heterobimetallic [(TMC)Fe(III)-O-Cr(III)(OTf)4] species (1) by bubbling O2 into a mixture of Fe(TMC)(OTf)2 and Cr(OTf)2 in NCCH3. Complex 1 also formed quantitatively by adding Cr(OTf)2 to [Fe(IV)(O)(TMC)(NCCH3)](2+). The proposed O2 activation mechanism involves the trapping of a Cr-O2 adduct by Fe(TMC)(OTf)2.
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Affiliation(s)
- Ang Zhou
- Department of Chemistry and Center for Metals in Biocatalysis, University of Minnesota, 207 Pleasant St. SE, Minneapolis, Minnesota 55455, USA.
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47
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Chatterjee S, Sengupta K, Hematian S, Karlin KD, Dey A. Electrocatalytic O2-Reduction by Synthetic Cytochrome c Oxidase Mimics: Identification of a "Bridging Peroxo" Intermediate Involved in Facile 4e(-)/4H(+) O2-Reduction. J Am Chem Soc 2015; 137:12897-905. [PMID: 26419806 DOI: 10.1021/jacs.5b06513] [Citation(s) in RCA: 76] [Impact Index Per Article: 8.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Abstract
A synthetic heme-Cu CcO model complex shows selective and highly efficient electrocatalytic 4e(-)/4H(+) O2-reduction to H2O with a large catalytic rate (>10(5) M(-1) s(-1)). While the heme-Cu model (FeCu) shows almost exclusive 4e(-)/4H(+) reduction of O2 to H2O (detected using ring disk electrochemistry and rotating ring disk electrochemistry), when imidazole is bound to the heme (Fe(Im)Cu), this same selective O2-reduction to water occurs only under slow electron fluxes. Surface enhanced resonance Raman spectroscopy coupled to dynamic electrochemistry data suggests the formation of a bridging peroxide intermediate during O2-reduction by both complexes under steady state reaction conditions, indicating that O-O bond heterolysis is likely to be the rate-determining step (RDS) at the mass transfer limited region. The O-O vibrational frequencies at 819 cm(-1) in (16)O2 (759 cm(-1) in (18)O2) for the FeCu complex and at 847 cm(-1) (786 cm(-1)) for the Fe(Im)Cu complex, indicate the formation of side-on and end-on bridging Fe-peroxo-Cu intermediates, respectively, during O2-reduction in an aqueous environment. These data suggest that side-on bridging peroxide intermediates are involved in fast and selective O2-reduction in these synthetic complexes. The greater amount of H2O2 production by the imidazole bound complex under fast electron transfer is due to 1e(-)/1H(+) O2-reduction by the distal Cu where O2 binding to the water bound low spin Fe(II) complex is inhibited.
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Affiliation(s)
- Sudipta Chatterjee
- Department of Inorganic Chemistry, Indian Association for the Cultivation of Science , Jadavpur, Kolkata 700032, India
| | - Kushal Sengupta
- Department of Inorganic Chemistry, Indian Association for the Cultivation of Science , Jadavpur, Kolkata 700032, India
| | - Shabnam Hematian
- Department of Chemistry, Johns Hopkins University , Baltimore, Maryland 21218, United States
| | - Kenneth D Karlin
- Department of Chemistry, Johns Hopkins University , Baltimore, Maryland 21218, United States
| | - Abhishek Dey
- Department of Inorganic Chemistry, Indian Association for the Cultivation of Science , Jadavpur, Kolkata 700032, India
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48
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Abstract
Mononuclear nonheme iron-oxygen species, such as iron-superoxo, -peroxo, -hydroperoxo, and -oxo, are key intermediates involved in dioxygen activation and oxidation reactions catalyzed by nonheme iron enzymes. Because these iron-oxygen intermediates are short-lived due to their thermal instability and high reactivity, it is challenging to investigate their structural and spectroscopic properties and reactivity in the catalytic cycles of the enzymatic reactions themselves. One way to approach such problems is to synthesize biomimetic iron-oxygen complexes and to tune their geometric and electronic structures for structural characterization and reactivity studies. Indeed, a number of biologically important iron-oxygen species, such as mononuclear nonheme iron(III)-superoxo, iron(III)-peroxo, iron(III)-hydroperoxo, iron(IV)-oxo, and iron(V)-oxo complexes, were synthesized recently, and the first X-ray crystal structures of iron(III)-superoxo, iron(III)-peroxo, and iron(IV)-oxo complexes in nonheme iron models were successfully obtained. Thus, our understanding of iron-oxygen intermediates in biological reactions has been aided greatly from the studies of the structural and spectroscopic properties and the reactivities of the synthetic biomimetic analogues. In this Account, we describe our recent results on the synthesis and characterization of mononuclear nonheme iron-oxygen complexes bearing simple macrocyclic ligands, such as N-tetramethylated cyclam ligand (TMC) and tetraamido macrocyclic ligand (TAML). In the case of iron-superoxo complexes, an iron(III)-superoxo complex, [(TAML)Fe(III)(O2)](2-), is described, including its crystal structure and reactivities in electrophilic and nucleophilic oxidative reactions, and its properties are compared with those of a chromium(III)-superoxo complex, [(TMC)Cr(III)(O2)(Cl)](+), with respect to its reactivities in hydrogen atom transfer (HAT) and oxygen atom transfer (OAT) reactions. In the case of iron-peroxo intermediates, an X-ray crystal structure of an iron(III)-peroxo complex binding the peroxo ligand in a side-on (η(2)) fashion, [(TMC)Fe(III)(O2)](+), is described. In addition, iron(III)-peroxo complexes binding redox-inactive metal ions are described and discussed in light of the role of redox-inactive metal ions in O-O bond activation in cytochrome c oxidase and O2-evolution in photosystem II. In the case of iron-hydroperoxo intermediates, mononuclear nonheme iron(III)-hydroperoxo complexes can be generated upon protonation of iron(III)-peroxo complexes or by hydrogen atom abstraction (HAA) of hydrocarbon C-H bonds by iron(III)-superoxo complexes. Reactivities of the iron(III)-hydroperoxo complexes in both electrophilic and nucleophilic oxidative reactions are described along with a discussion of O-O bond cleavage mechanisms. In the last section of this Account, a brief summary is presented of developments in mononuclear nonheme iron(IV)-oxo complexes since the first structurally characterized iron(IV)-oxo complex, [(TMC)Fe(IV)(O)](2+), was reported. Although the field of nonheme iron-oxygen intermediates (e.g., Fe-O2, Fe-O2H, and Fe-O) has been developed greatly through intense synthetic, structural, spectroscopic, reactivity, and theoretical studies in the communities of bioinorganic and biomimetic chemistry over the past 10 years, there is still much to be explored in trapping, characterizing, and understanding the chemical properties of the key iron-oxygen intermediates involved in dioxygen activation and oxidation reactions by nonheme iron enzymes and their biomimetic compounds.
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Affiliation(s)
- Wonwoo Nam
- Department of Chemistry and
Nano Science, Ewha Womans University, Seoul 120-750, Korea
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49
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Serrano-Plana J, Garcia-Bosch I, Company A, Costas M. Structural and reactivity models for copper oxygenases: cooperative effects and novel reactivities. Acc Chem Res 2015. [PMID: 26207342 DOI: 10.1021/acs.accounts.5b00187] [Citation(s) in RCA: 93] [Impact Index Per Article: 10.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
Abstract
Dioxygen is widely used in nature as oxidant. Nature itself has served as inspiration to use O2 in chemical synthesis. However, the use of dioxygen as an oxidant is not straightforward. Its triplet ground-state electronic structure makes it unreactive toward most organic substrates. In natural systems, metalloenzymes activate O2 by reducing it to more reactive peroxide (O2(2-)) or superoxide (O2(-)) forms. Over the years, the development of model systems containing transition metals has become a convenient tool for unravelling O2-activation mechanistic aspects and reproducing the oxidative activity of enzymes. Several copper-based systems have been developed within this area. Tyrosinase is a copper-based O2-activating enzyme, whose structure and reactivity have been widely studied, and that serves as a paradigm for O2 activation at a dimetal site. It contains a dicopper center in its active site, and it catalyzes the regioselective ortho-hydroxylation of phenols to catechols and further oxidation to quinones. This represents an important step in melanin biosynthesis and it is mediated by a dicopper(II) side-on peroxo intermediate species. In the present accounts, our research in the field of copper models for oxygen activation is collected. We have developed m-xylyl linked dicopper systems that mimick structural and reactivity aspects of tyrosinase. Synergistic cooperation of the two copper(I) centers results in O2 binding and formation of bis(μ-oxo)dicopper(III) cores. These in turn bind and ortho-hydroxylate phenolates via an electrophilic attack of the oxo ligand over the arene. Interestingly the bis(μ-oxo)dicopper(III) cores can also engage in ortho-hydroxylation-defluorination of deprotonated 2-fluorophenols, substrates that are well-known enzyme inhibitors. Analysis of Cu2O2 species with different binding modes show that only the bis(μ-oxo)dicopper(III) cores can mediate the reaction. Finally, the use of unsymmetric systems for oxygen activation is a field that still remains rather unexplored. We envision that the unsymmetry might infere interesting new reactivities. We contributed to this topic with the development of an unsymmetric ligand (m-XYL(N3N4)), whose dicuprous complex reacts with O2 and forms a trans-peroxo dicopper(II) species that showed a markedly different reactivity compared to a symmetric trans-peroxo dicopper(II) analog. Nucleophilic reactivity is observed for the unsymmetric trans-peroxo dicopper(II) species against electrophilies such as H(+), CO2 and aldehydes, and neither oxygen atom transfer nor hydrogen abstraction is observed when reacting with oxygen atom acceptors (triphenyl phosphine, sulfides) and substrates with weak C-H bonds. Instead, electrophilic monooxygenase-like ortho-hydroxylation reactivity is described for these unsymmetric species upon reaction with phenolates. Finally, by using a second dinucleating unsymmetric ligand (L(N3N4)), we have described copper(I) containing heterodimetallic systems and explored their O2 binding properties. Site specific metalation led to the generation of dimeric heterometallic M'CuO2CuM' species from intermolecular O2 binding at copper sites.
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Affiliation(s)
- Joan Serrano-Plana
- Grup
de Química Bioinorgànica, Supramolecular i Catàlisi
(QBIS-CAT), Institut de Química Computacional i Catàlisi
(IQCC), Departament de Química, Universitat de Girona, Campus Montilivi, E17071 Girona, Catalonia, Spain
| | - Isaac Garcia-Bosch
- Grup
de Química Bioinorgànica, Supramolecular i Catàlisi
(QBIS-CAT), Institut de Química Computacional i Catàlisi
(IQCC), Departament de Química, Universitat de Girona, Campus Montilivi, E17071 Girona, Catalonia, Spain
- Department of Chemistry, Southern Methodist University, Dallas, Texas 75275-0314, United States
| | - Anna Company
- Grup
de Química Bioinorgànica, Supramolecular i Catàlisi
(QBIS-CAT), Institut de Química Computacional i Catàlisi
(IQCC), Departament de Química, Universitat de Girona, Campus Montilivi, E17071 Girona, Catalonia, Spain
| | - Miquel Costas
- Grup
de Química Bioinorgànica, Supramolecular i Catàlisi
(QBIS-CAT), Institut de Química Computacional i Catàlisi
(IQCC), Departament de Química, Universitat de Girona, Campus Montilivi, E17071 Girona, Catalonia, Spain
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50
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Hematian S, Garcia-Bosch I, Karlin KD. Synthetic heme/copper assemblies: toward an understanding of cytochrome c oxidase interactions with dioxygen and nitrogen oxides. Acc Chem Res 2015; 48:2462-74. [PMID: 26244814 DOI: 10.1021/acs.accounts.5b00265] [Citation(s) in RCA: 79] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
Abstract
Our long-time niche in synthetic biological inorganic chemistry has been to design ligands and generate coordination complexes of copper or iron ions or both, those reacting with dioxygen (O2) or nitrogen oxides (e.g., nitric oxide (NO(g)) and nitrite (NO2(-))) or both. As inspiration for this work, we turn to mitochondrial cytochrome c oxidase, which is responsible for dioxygen consumption and is also the predominant target for NO(g) and nitrite within mitochondria. In this Account, we highlight recent advances in studying synthetic heme/Cu complexes in two respects. First, there is the design, synthesis, and characterization of new O2 adducts whose further study will add insights into O2 reductive cleavage chemistry. Second, we describe how related heme/Cu constructs reduce nitrite ion to NO(g) or the reverse, oxidize NO(g) to nitrite. The reactions of nitrogen oxides occur as part of CcO's function, which is intimately tied to cellular O2 balance. We had first discovered that reduced heme/Cu compounds react with O2 giving μ-oxo heme-Fe(III)-O-Cu(II)(L) products; their properties are discussed. The O-atom is derived from dioxygen, and interrogations of these systems led to the construction and characterization of three distinctive classes of heme-peroxo complexes, two high-spin and one low-spin species. Recent investigations include a new approach to the synthesis of low-spin heme-peroxo-Cu complexes, employing a "naked" synthon, where the copper ligand denticity and geometric types can be varied. The result is a collection of such complexes; spectroscopic and structural features (by DFT calculations) are described. Some of these compounds are reactive toward reductants/protons effecting subsequent O-O cleavage. This points to how subtle improvements in ligand environment lead to a desired local structure and resulting optimized reactivity, as known to occur at enzyme active sites. The other sector of research is focused on heme/Cu assemblies mediating the redox interplay between nitrite and NO(g). In the nitrite reductase chemistry, the cupric center serves as a Lewis acid, while the heme is the redox active center providing the electron. The orientation of nitrite in approaching the ferrous heme center and N-atom binding are important. Also, detailed spectroscopic and kinetic studies of the NO(g) oxidase chemistry, in excellent agreement with theoretical calculations, reveal the intermediates and key mechanistic steps. Thus, we suggest that both chemical and biochemical heme/Cu-mediated nitrite reductase and NO(g) oxidase chemistry require N-atom binding to a ferrous heme along with cupric ion O-atom coordination, proceeding via a three-membered O-Fe-N chelate ring transition state. These important mechanistic features of heme/Cu systems interconverting NO(g) and nitrite are discussed for the first time.
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Affiliation(s)
- Shabnam Hematian
- Department of Chemistry, Johns Hopkins University, Baltimore, Maryland 21211, United States
| | - Isaac Garcia-Bosch
- Department of Chemistry, Johns Hopkins University, Baltimore, Maryland 21211, United States
| | - Kenneth D. Karlin
- Department of Chemistry, Johns Hopkins University, Baltimore, Maryland 21211, United States
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