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For: Oikonomakos NG, Johnson LN, Acharya KR, Stuart DI, Barford D, Hajdu J, Varvill KM, Melpidou AE, Papageorgiou T, Graves DJ. Pyridoxal phosphate site in glycogen phosphorylase b: structure in native enzyme and in three derivatives with modified cofactors. Biochemistry 1987;26:8381-9. [PMID: 3126802 DOI: 10.1021/bi00399a053] [Citation(s) in RCA: 38] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
Number Cited by Other Article(s)
1
Nadeau OW, Fontes JD, Carlson GM. The regulation of glycogenolysis in the brain. J Biol Chem 2018;293:7099-7107. [PMID: 29483194 DOI: 10.1074/jbc.r117.803023] [Citation(s) in RCA: 46] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]  Open
2
Beauchamp NJ, Taybert J, Champion MP, Layet V, Heinz-Erian P, Dalton A, Tanner MS, Pronicka E, Sharrard MJ. High frequency of missense mutations in glycogen storage disease type VI. J Inherit Metab Dis 2007;30:722-34. [PMID: 17705025 DOI: 10.1007/s10545-007-0499-9] [Citation(s) in RCA: 35] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 11/01/2006] [Revised: 05/11/2007] [Accepted: 06/11/2007] [Indexed: 11/24/2022]
3
Vázquez MA, Muñoz F, Donoso J, García-Blanco F. Kinetic Study on Stability ofSchiffBase of Pyridoxal 5′-Phosphate and Leucine in Water Media with Cationic Surfactants. Helv Chim Acta 2004. [DOI: 10.1002/hlca.19920750406] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
4
Vázquez MA, Muñoz F, Donoso J, Blanco FG. Schiff bases between pyridoxal 5′-phosphate and dodecylamine. Kinetic study. INT J CHEM KINET 2004. [DOI: 10.1002/kin.550240108] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
5
Denesyuk AI, Denessiouk KA, Korpela T, Johnson MS. Functional attributes of the phosphate group binding cup of pyridoxal phosphate-dependent enzymes. J Mol Biol 2002;316:155-72. [PMID: 11829510 DOI: 10.1006/jmbi.2001.5310] [Citation(s) in RCA: 59] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
6
Metzler DE, Metzler CM, Sauke DJ. Transferring Groups by Displacement Reactions. Biochemistry 2001. [DOI: 10.1016/b978-012492543-4/50015-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
7
Ruzicka FJ, Lieder KW, Frey PA. Lysine 2,3-aminomutase from Clostridium subterminale SB4: mass spectral characterization of cyanogen bromide-treated peptides and cloning, sequencing, and expression of the gene kamA in Escherichia coli. J Bacteriol 2000;182:469-76. [PMID: 10629195 PMCID: PMC94298 DOI: 10.1128/jb.182.2.469-476.2000] [Citation(s) in RCA: 38] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
8
Denessiouk KA, Denesyuk AI, Lehtonen JV, Korpela T, Johnson MS. Common structural elements in the architecture of the cofactor-binding domains in unrelated families of pyridoxal phosphate-dependent enzymes. Proteins 1999;35:250-61. [PMID: 10223296 DOI: 10.1002/(sici)1097-0134(19990501)35:2<250::aid-prot10>3.0.co;2-x] [Citation(s) in RCA: 28] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
9
Agasimundin YS, Mumper MW, Hosmane RS. Inhibitors of glycogen phosphorylase b: synthesis, biochemical screening, and molecular modeling studies of novel analogues of hydantocidin. Bioorg Med Chem 1998;6:911-23. [PMID: 9730227 DOI: 10.1016/s0968-0896(98)00055-8] [Citation(s) in RCA: 18] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
10
Time-resolved diffraction studies on glycogen phosphorylase b. ACTA ACUST UNITED AC 1997. [DOI: 10.1098/rsta.1992.0064] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
11
Oikonomakos NG, Zographos SE, Tsitsanou KE, Johnson LN, Acharya KR. Activator anion binding site in pyridoxal phosphorylase b: the binding of phosphite, phosphate, and fluorophosphate in the crystal. Protein Sci 1996;5:2416-28. [PMID: 8976550 PMCID: PMC2143326 DOI: 10.1002/pro.5560051204] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/03/2023]
12
Stirtan WG, Withers SG. Phosphonate and alpha-fluorophosphonate analogue probes of the ionization state of pyridoxal 5'-phosphate (PLP) in glycogen phosphorylase. Biochemistry 1996;35:15057-64. [PMID: 8942672 DOI: 10.1021/bi9606004] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/03/2023]
13
García del Vado M, Martín Pérez M, Rodríguez Cardona AF, Echevarría GR, Santos Blanco J, Blanco FG. Kinetics of the formation and hydrolysis of the Schiff bases of pyridoxal 5′-phosphate and copolypeptides containing l-lysine and aromatic l-amino acids. ACTA ACUST UNITED AC 1996. [DOI: 10.1016/1381-1169(96)00210-5] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
14
Momany C, Ghosh R, Hackert ML. Structural motifs for pyridoxal-5'-phosphate binding in decarboxylases: an analysis based on the crystal structure of the Lactobacillus 30a ornithine decarboxylase. Protein Sci 1995;4:849-54. [PMID: 7663340 PMCID: PMC2143112 DOI: 10.1002/pro.5560040504] [Citation(s) in RCA: 58] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]
15
Leonidas DD, Oikonomakos NG, Papageorgiou AC, Acharya KR, Barford D, Johnson LN. Control of phosphorylase b conformation by a modified cofactor: crystallographic studies on R-state glycogen phosphorylase reconstituted with pyridoxal 5'-diphosphate. Protein Sci 1992;1:1112-22. [PMID: 1304390 PMCID: PMC2142186 DOI: 10.1002/pro.5560010905] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
16
Barford D, Johnson LN. The molecular mechanism for the tetrameric association of glycogen phosphorylase promoted by protein phosphorylation. Protein Sci 1992;1:472-93. [PMID: 1304350 PMCID: PMC2142214 DOI: 10.1002/pro.5560010403] [Citation(s) in RCA: 39] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
17
del Vado MAG, Echevarría G, Vázquez MA, Blanco FG. Band-shape analysis of electronic spectra and study of the hydrolysis of the Schiff bases of 5′-deoxypyridoxal and n-hexylamine in aqueous and non-aqueous media. ACTA ACUST UNITED AC 1992. [DOI: 10.1039/p29920000915] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
18
del Vado MG, Echevarria GR, Blanco FG, Santos Blanco JG, Blázquez M, Sevilla JM, Dominguez M. Schiff bases of pyridoxal 5′-phosphate and polypeptides containing L-lysine: A kinetic study. ACTA ACUST UNITED AC 1991. [DOI: 10.1016/0304-5102(91)80095-k] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
19
Papageorgiou AC, Oikonomakos NG, Leonidas DD, Bernet B, Beer D, Vasella A. The binding of D-gluconohydroximo-1,5-lactone to glycogen phosphorylase. Kinetic, ultracentrifugation and crystallographic studies. Biochem J 1991;274 ( Pt 2):329-38. [PMID: 1900987 PMCID: PMC1150141 DOI: 10.1042/bj2740329] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
20
Vázquez MA, Donoso J, Muñoz F, Blanco FG, del Vado MAG, Echevarria G. Formation of Schiff bases of 5′-deoxypyridoxal and hexylamine in aqueous and non-aqueous media. ACTA ACUST UNITED AC 1991. [DOI: 10.1039/p29910001143] [Citation(s) in RCA: 21] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
21
Marceau M, Lewis SD, Kojiro CL, Mountjoy K, Shafer JA. Disruption of active site interactions with pyridoxal 5'-phosphate and substrates by conservative replacements in the glycine-rich loop of Escherichia coli D-serine dehydratase. J Biol Chem 1990. [DOI: 10.1016/s0021-9258(17)30521-5] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]  Open
22
Withers SG, Rupitz K. Measurement of active-site homology between potato and rabbit muscle alpha-glucan phosphorylases through use of a linear free energy relationship. Biochemistry 1990;29:6405-9. [PMID: 2207081 DOI: 10.1021/bi00479a010] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
23
Palm D, Klein HW, Schinzel R, Buehner M, Helmreich EJ. The role of pyridoxal 5'-phosphate in glycogen phosphorylase catalysis. Biochemistry 1990;29:1099-107. [PMID: 2182117 DOI: 10.1021/bi00457a001] [Citation(s) in RCA: 135] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
24
Johnson LN, Acharya KR, Jordan MD, McLaughlin PJ. Refined crystal structure of the phosphorylase-heptulose 2-phosphate-oligosaccharide-AMP complex. J Mol Biol 1990;211:645-61. [PMID: 2106586 DOI: 10.1016/0022-2836(90)90271-m] [Citation(s) in RCA: 80] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
25
Johnson LN, Barford D. Glycogen phosphorylase. The structural basis of the allosteric response and comparison with other allosteric proteins. J Biol Chem 1990. [DOI: 10.1016/s0021-9258(19)39810-2] [Citation(s) in RCA: 61] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]  Open
26
Johnson LN. Glycogen phosphorylase: a multifaceted enzyme. CARLSBERG RESEARCH COMMUNICATIONS 1989;54:203-29. [PMID: 2490368 DOI: 10.1007/bf02910457] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
27
Barford D, Johnson LN. The allosteric transition of glycogen phosphorylase. Nature 1989;340:609-16. [PMID: 2770867 DOI: 10.1038/340609a0] [Citation(s) in RCA: 227] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
28
Street IP, Rupitz K, Withers SG. Fluorinated and deoxygenated substrates as probes of transition-state structure in glycogen phosphorylase. Biochemistry 1989;28:1581-7. [PMID: 2719921 DOI: 10.1021/bi00430a024] [Citation(s) in RCA: 44] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
29
Marceau M, Lewis SD, Kojiro CL, Shafer JA. Contribution of a conserved arginine near the active site of Escherichia coli D-serine dehydratase to cofactor affinity and catalytic activity. J Biol Chem 1989. [DOI: 10.1016/s0021-9258(19)81677-0] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]  Open
30
Sprang SR, Acharya KR, Goldsmith EJ, Stuart DI, Varvill K, Fletterick RJ, Madsen NB, Johnson LN. Structural changes in glycogen phosphorylase induced by phosphorylation. Nature 1988;336:215-21. [PMID: 3194008 DOI: 10.1038/336215a0] [Citation(s) in RCA: 234] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
31
Marceau M, Lewis SD, Shafer JA. The glycine-rich region of Escherichia coli D-serine dehydratase. Altered interactions with pyridoxal 5′-phosphate produced by substitution of aspartic acid for glycine. J Biol Chem 1988. [DOI: 10.1016/s0021-9258(18)37481-7] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]  Open
32
Hyde CC, Ahmed SA, Padlan EA, Miles EW, Davies DR. Three-dimensional structure of the tryptophan synthase alpha 2 beta 2 multienzyme complex from Salmonella typhimurium. J Biol Chem 1988. [DOI: 10.1016/s0021-9258(19)77913-7] [Citation(s) in RCA: 330] [Impact Index Per Article: 9.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]  Open
33
Marceau M, McFall E, Lewis SD, Shafer JA. D-serine dehydratase from Escherichia coli. DNA sequence and identification of catalytically inactive glycine to aspartic acid variants. J Biol Chem 1988. [DOI: 10.1016/s0021-9258(18)37480-5] [Citation(s) in RCA: 40] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]  Open
34
Oikonomakos NG, Acharya KR, Stuart DI, Melpidou AE, McLaughlin PJ, Johnson LN. Uridine(5')diphospho(1)-alpha-D-glucose. A binding study to glycogen phosphorylase b in the crystal. EUROPEAN JOURNAL OF BIOCHEMISTRY 1988;173:569-78. [PMID: 3371347 DOI: 10.1111/j.1432-1033.1988.tb14037.x] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
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