1
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Huang Y, Li S, Zettle LWC, Ma Y, Naguib HE, Kumacheva E. Nanogels designed for cell-free nucleic acid sequestration. NANOSCALE 2023; 15:14531-14542. [PMID: 37609883 DOI: 10.1039/d3nr03231k] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 08/24/2023]
Abstract
Chronic wounds exhibit over-expression of cell-free deoxyribonucleic acid (cfDNA), leading to a prolonged inflammation and non-healing wounds. Scavenging excessive cfDNA molecules is a promising strategy for chronic wound treatment. Nanoscopic particles act as efficient cfDNA scavengers due to their large surface area, however their efficiency in cfDNA uptake was limited by adsorption solely on the nanoparticle surface. In contrast, nanogels may provide multiple cfDNA binding sites in the nanoparticle interior, however their use for cfDNA scavenging is yet to be explored. Herein, we report cationic nanogels derived from a copolymer of chitosan and poly{2-[(acryloyloxy)ethyl]trimethylammonium chloride} end-grafted to the chitosan backbone as side chains. The nanogels retain their positive charge at the pH and ionic strength of chronic wound exudate, enabling electrostatically driven cfDNA scavenging. The network structure of the nanogels leads to the cfDNA sequestration in the nanogel interior, in addition to surface attachment. A key factor in cfDNA sequestration is the ratio of the pore size of the nanogel-to-cfDNA molecular dimensions. The enhanced cfDNA scavenging efficiency, along with biocompatibility of the nanogels, makes them a promising component of dressings for chronic wound treatment.
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Affiliation(s)
- Yuhang Huang
- Department of Chemical Engineering and Applied Chemistry, University of Toronto, Toronto, Ontario M5S 3E5, Canada.
| | - Shangyu Li
- Department of Chemistry, University of Toronto, Toronto, Ontario M5S 3H6, Canada
| | - Logan W C Zettle
- Department of Chemistry, University of Toronto, Toronto, Ontario M5S 3H6, Canada
| | - Yingshan Ma
- Department of Chemistry, University of Toronto, Toronto, Ontario M5S 3H6, Canada
| | - Hani E Naguib
- Department of Chemical Engineering and Applied Chemistry, University of Toronto, Toronto, Ontario M5S 3E5, Canada.
- Department of Mechanical and Industrial Engineering, University of Toronto, Toronto, Ontario M5S 3G8, Canada
- Department of Materials Science and Engineering, University of Toronto, Toronto, Ontario M5S 3E4, Canada
- Institute of Biomedical Engineering, University of Toronto, Toronto, Ontario M5S 3E4, Canada
| | - Eugenia Kumacheva
- Department of Chemical Engineering and Applied Chemistry, University of Toronto, Toronto, Ontario M5S 3E5, Canada.
- Department of Chemistry, University of Toronto, Toronto, Ontario M5S 3H6, Canada
- Institute of Biomedical Engineering, University of Toronto, Toronto, Ontario M5S 3E4, Canada
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2
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Perez S, Makshakova O, Angulo J, Bedini E, Bisio A, de Paz JL, Fadda E, Guerrini M, Hricovini M, Hricovini M, Lisacek F, Nieto PM, Pagel K, Paiardi G, Richter R, Samsonov SA, Vivès RR, Nikitovic D, Ricard Blum S. Glycosaminoglycans: What Remains To Be Deciphered? JACS AU 2023; 3:628-656. [PMID: 37006755 PMCID: PMC10052243 DOI: 10.1021/jacsau.2c00569] [Citation(s) in RCA: 22] [Impact Index Per Article: 22.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/15/2022] [Revised: 12/05/2022] [Accepted: 12/07/2022] [Indexed: 06/19/2023]
Abstract
Glycosaminoglycans (GAGs) are complex polysaccharides exhibiting a vast structural diversity and fulfilling various functions mediated by thousands of interactions in the extracellular matrix, at the cell surface, and within the cells where they have been detected in the nucleus. It is known that the chemical groups attached to GAGs and GAG conformations comprise "glycocodes" that are not yet fully deciphered. The molecular context also matters for GAG structures and functions, and the influence of the structure and functions of the proteoglycan core proteins on sulfated GAGs and vice versa warrants further investigation. The lack of dedicated bioinformatic tools for mining GAG data sets contributes to a partial characterization of the structural and functional landscape and interactions of GAGs. These pending issues will benefit from the development of new approaches reviewed here, namely (i) the synthesis of GAG oligosaccharides to build large and diverse GAG libraries, (ii) GAG analysis and sequencing by mass spectrometry (e.g., ion mobility-mass spectrometry), gas-phase infrared spectroscopy, recognition tunnelling nanopores, and molecular modeling to identify bioactive GAG sequences, biophysical methods to investigate binding interfaces, and to expand our knowledge and understanding of glycocodes governing GAG molecular recognition, and (iii) artificial intelligence for in-depth investigation of GAGomic data sets and their integration with proteomics.
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Affiliation(s)
- Serge Perez
- Centre
de Recherche sur les Macromolecules, Vegetales,
University of Grenoble-Alpes, Centre National de la Recherche Scientifique, Grenoble F-38041 France
| | - Olga Makshakova
- FRC
Kazan Scientific Center of Russian Academy of Sciences, Kazan Institute of Biochemistry and Biophysics, Kazan 420111, Russia
| | - Jesus Angulo
- Insituto
de Investigaciones Quimicas, CIC Cartuja, CSIC and Universidad de Sevilla, Sevilla, SP 41092, Spain
| | - Emiliano Bedini
- Department
of Chemical Sciences, University of Naples
Federico II, Naples,I-80126, Italy
| | - Antonella Bisio
- Istituto
di Richerche Chimiche e Biochimiche, G. Ronzoni, Milan I-20133, Italy
| | - Jose Luis de Paz
- Insituto
de Investigaciones Quimicas, CIC Cartuja, CSIC and Universidad de Sevilla, Sevilla, SP 41092, Spain
| | - Elisa Fadda
- Department
of Chemistry and Hamilton Institute, Maynooth
University, Maynooth W23 F2H6, Ireland
| | - Marco Guerrini
- Istituto
di Richerche Chimiche e Biochimiche, G. Ronzoni, Milan I-20133, Italy
| | - Michal Hricovini
- Institute
of Chemistry, Slovak Academy of Sciences, Bratislava SK-845 38, Slovakia
| | - Milos Hricovini
- Institute
of Chemistry, Slovak Academy of Sciences, Bratislava SK-845 38, Slovakia
| | - Frederique Lisacek
- Computer
Science Department & Section of Biology, University of Geneva & Swiss Institue of Bioinformatics, Geneva CH-1227, Switzerland
| | - Pedro M. Nieto
- Insituto
de Investigaciones Quimicas, CIC Cartuja, CSIC and Universidad de Sevilla, Sevilla, SP 41092, Spain
| | - Kevin Pagel
- Institut
für Chemie und Biochemie Organische Chemie, Freie Universität Berlin, Berlin 14195, Germany
| | - Giulia Paiardi
- Molecular
and Cellular Modeling Group, Heidelberg Institute for Theoretical
Studies, Heidelberg University, Heidelberg 69118, Germany
| | - Ralf Richter
- School
of Biomedical Sciences, Faculty of Biological Sciences, School of
Physics and Astronomy, Faculty of Engineering and Physical Sciences,
Astbury Centre for Structural Molecular Biology and Bragg Centre for
Materials Research, University of Leeds, Leeds LS2 9JT, United Kingdom
| | - Sergey A. Samsonov
- Department
of Theoretical Chemistry, Faculty of Chemistry, University of Gdansk, Gdsank 80-309, Poland
| | - Romain R. Vivès
- Univ.
Grenoble Alpes, CNRS, CEA, IBS, Grenoble F-38044, France
| | - Dragana Nikitovic
- School
of Histology-Embriology, Medical School, University of Crete, Heraklion 71003, Greece
| | - Sylvie Ricard Blum
- University
Claude Bernard Lyon 1, CNRS, INSA Lyon, CPE, Institute of Molecular and Supramolecular Chemistry and Biochemistry,
UMR 5246, Villeurbanne F 69622 Cedex, France
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3
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Hanssen KØ, Malthe-Sørenssen A. Perineuronal nets restrict transport near the neuron surface: A coarse-grained molecular dynamics study. Front Comput Neurosci 2022; 16:967735. [DOI: 10.3389/fncom.2022.967735] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2022] [Accepted: 11/02/2022] [Indexed: 11/18/2022] Open
Abstract
Perineuronal nets (PNNs) are mesh-like extracellular matrix structures that wrap around certain neurons in the central nervous system. They are hypothesized to stabilize memories in the brain and act as a barrier between cell and extracellular space. As a means to study the impact of PNNs on diffusion, the nets were approximated by negatively charged polymer brushes and simulated by coarse-grained molecular dynamics. Diffusion constants of single neutral and single charged particles were obtained in directions parallel and perpendicular to the brush substrate. The results for the neutral particle were compared to different theories of diffusion in a heuristic manner. Diffusion was found to be considerably reduced for brush spacings smaller than 10 nm, with a pronounced anisotropy for dense brushes. The exact dynamics of the chains was found to have a negligible impact on particle diffusion. The resistance of the brush proved small compared to typical values of the membrane resistance of a neuron, indicating that PNNs likely contribute little to the total resistance of an enwrapped neuron.
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4
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Srimasorn S, Souter L, Green DE, Djerbal L, Goodenough A, Duncan JA, Roberts ARE, Zhang X, Débarre D, DeAngelis PL, Kwok JCF, Richter RP. A quartz crystal microbalance method to quantify the size of hyaluronan and other glycosaminoglycans on surfaces. Sci Rep 2022; 12:10980. [PMID: 35768463 PMCID: PMC9243130 DOI: 10.1038/s41598-022-14948-7] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/23/2022] [Accepted: 06/15/2022] [Indexed: 11/09/2022] Open
Abstract
Hyaluronan (HA) is a major component of peri- and extra-cellular matrices and plays important roles in many biological processes such as cell adhesion, proliferation and migration. The abundance, size distribution and presentation of HA dictate its biological effects and are also useful indicators of pathologies and disease progression. Methods to assess the molecular mass of free-floating HA and other glycosaminoglycans (GAGs) are well established. In many biological and technological settings, however, GAGs are displayed on surfaces, and methods to obtain the size of surface-attached GAGs are lacking. Here, we present a method to size HA that is end-attached to surfaces. The method is based on the quartz crystal microbalance with dissipation monitoring (QCM-D) and exploits that the softness and thickness of films of grafted HA increase with HA size. These two quantities are sensitively reflected by the ratio of the dissipation shift (ΔD) and the negative frequency shift (- Δf) measured by QCM-D upon the formation of HA films. Using a series of size-defined HA preparations, ranging in size from ~ 2 kDa tetrasaccharides to ~ 1 MDa polysaccharides, we establish a monotonic yet non-linear standard curve of the ΔD/ - Δf ratio as a function of HA size, which reflects the distinct conformations adopted by grafted HA chains depending on their size and surface coverage. We demonstrate that the standard curve can be used to determine the mean size of HA, as well as other GAGs, such as chondroitin sulfate and heparan sulfate, of preparations of previously unknown size in the range from 1 to 500 kDa, with a resolution of better than 10%. For polydisperse samples, our analysis shows that the process of surface-grafting preferentially selects smaller GAG chains, and thus reduces the average size of GAGs that are immobilised on surfaces comparative to the original solution sample. Our results establish a quantitative method to size HA and other GAGs grafted on surfaces, and also highlight the importance of sizing GAGs directly on surfaces. The method should be useful for the development and quality control of GAG-based surface coatings in a wide range of research areas, from molecular interaction analysis to biomaterials coatings.
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Affiliation(s)
- Sumitra Srimasorn
- School of Biomedical Sciences, Faculty of Biological Sciences, University of Leeds, Leeds, LS2 9JT, UK.,School of Physics and Astronomy, Faculty of Engineering and Physical Sciences, Astbury Centre for Structural Molecular Biology, and Bragg Centre for Materials Research, University of Leeds, Leeds, LS2 9JT, UK
| | - Luke Souter
- School of Biomedical Sciences, Faculty of Biological Sciences, University of Leeds, Leeds, LS2 9JT, UK
| | - Dixy E Green
- Department of Biochemistry and Molecular Biology, University of Oklahoma Health Sciences Center, Oklahoma City, OK, 73126, USA
| | - Lynda Djerbal
- School of Biomedical Sciences, Faculty of Biological Sciences, University of Leeds, Leeds, LS2 9JT, UK
| | - Ashleigh Goodenough
- School of Biomedical Sciences, Faculty of Biological Sciences, University of Leeds, Leeds, LS2 9JT, UK.,School of Physics and Astronomy, Faculty of Engineering and Physical Sciences, Astbury Centre for Structural Molecular Biology, and Bragg Centre for Materials Research, University of Leeds, Leeds, LS2 9JT, UK
| | - James A Duncan
- School of Biomedical Sciences, Faculty of Biological Sciences, University of Leeds, Leeds, LS2 9JT, UK.,School of Chemistry, Faculty of Engineering and Physical Sciences, University of Leeds, Leeds, LS2 9JT, UK
| | - Abigail R E Roberts
- School of Biomedical Sciences, Faculty of Biological Sciences, University of Leeds, Leeds, LS2 9JT, UK.,School of Physics and Astronomy, Faculty of Engineering and Physical Sciences, Astbury Centre for Structural Molecular Biology, and Bragg Centre for Materials Research, University of Leeds, Leeds, LS2 9JT, UK
| | - Xiaoli Zhang
- School of Biomedical Sciences, Faculty of Biological Sciences, University of Leeds, Leeds, LS2 9JT, UK.,School of Physics and Astronomy, Faculty of Engineering and Physical Sciences, Astbury Centre for Structural Molecular Biology, and Bragg Centre for Materials Research, University of Leeds, Leeds, LS2 9JT, UK
| | | | - Paul L DeAngelis
- Department of Biochemistry and Molecular Biology, University of Oklahoma Health Sciences Center, Oklahoma City, OK, 73126, USA
| | - Jessica C F Kwok
- School of Biomedical Sciences, Faculty of Biological Sciences, University of Leeds, Leeds, LS2 9JT, UK. .,Institute of Experimental Medicine, Czech Academy of Sciences, Vídeňská, 1083, Prague, Czech Republic.
| | - Ralf P Richter
- School of Biomedical Sciences, Faculty of Biological Sciences, University of Leeds, Leeds, LS2 9JT, UK. .,School of Physics and Astronomy, Faculty of Engineering and Physical Sciences, Astbury Centre for Structural Molecular Biology, and Bragg Centre for Materials Research, University of Leeds, Leeds, LS2 9JT, UK.
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5
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Abstract
I review experimental developments in the growth and application of surface-grafted weak polyelectrolytes (brushes), concentrating on their surface, tribological, and adhesive and bioadhesive properties, and their role as actuators.
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Affiliation(s)
- Mark Geoghegan
- School of Engineering, Newcastle University, Merz Court, Newcastle-upon-Tyne NE1 7RU, UK.
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6
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Ehtiati K, Z. Moghaddam S, Daugaard AE, Thormann E. Crucial Nonelectrostatic Effects on Polyelectrolyte Brush Behavior. Macromolecules 2021. [DOI: 10.1021/acs.macromol.0c02526] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Koosha Ehtiati
- Department of Chemistry, Technical University of Denmark, Kgs. Lyngby 2800, Denmark
| | - Saeed Z. Moghaddam
- Department of Chemistry, Technical University of Denmark, Kgs. Lyngby 2800, Denmark
| | - Anders E. Daugaard
- Danish Polymer Center, Department of Chemical and Biochemical Engineering, Technical University of Denmark, Kgs. Lyngby 2800, Denmark
| | - Esben Thormann
- Department of Chemistry, Technical University of Denmark, Kgs. Lyngby 2800, Denmark
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7
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Giubertoni G, Burla F, Bakker HJ, Koenderink GH. Connecting the Stimuli-Responsive Rheology of Biopolymer Hydrogels to Underlying Hydrogen-Bonding Interactions. Macromolecules 2020; 53:10503-10513. [PMID: 33335340 PMCID: PMC7735748 DOI: 10.1021/acs.macromol.0c01742] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/27/2020] [Revised: 11/04/2020] [Indexed: 11/29/2022]
Abstract
Many biopolymer hydrogels are environmentally responsive because they are held together by physical associations that depend on pH and temperature. Here, we investigate how the pH and temperature responses of the rheology of hyaluronan hydrogels are connected to the underlying molecular interactions. Hyaluronan is an essential structural biopolymer in the human body with many applications in biomedicine. Using two-dimensional infrared spectroscopy, we show that hyaluronan chains become connected by hydrogen bonds when the pH is changed from 7.0 to 2.5 and that the bond density at pH 2.5 is independent of temperature. Temperature-dependent rheology measurements show that because of this hydrogen bonding the stress relaxation at pH 2.5 is strongly slowed down in comparison to pH 7.0, consistent with the sticky reptation model of associative polymers. From the flow activation energy, we conclude that each polymer is cross-linked by multiple (5-15) hydrogen bonds to others, causing slow macroscopic stress relaxation, despite the short time scale of breaking and reformation of each individual hydrogen bond. Our findings can aid the design of stimuli-responsive hydrogels with tailored viscoelastic properties for biomedical applications.
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Affiliation(s)
| | - Federica Burla
- AMOLF, Science Park 104, Amsterdam 1098 XG, The Netherlands
| | - Huib J. Bakker
- AMOLF, Science Park 104, Amsterdam 1098 XG, The Netherlands
| | - Gijsje H. Koenderink
- AMOLF, Science Park 104, Amsterdam 1098 XG, The Netherlands
- Department of Bionanoscience, Kavli Institute
of Nanoscience Delft, Delft University of
Technology, Van der Maasweg 9, Delft 2629 HZ, The Netherlands
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8
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Ferrand-Drake del Castillo G, Hailes RLN, Dahlin A. Large Changes in Protonation of Weak Polyelectrolyte Brushes with Salt Concentration-Implications for Protein Immobilization. J Phys Chem Lett 2020; 11:5212-5218. [PMID: 32515599 PMCID: PMC7467743 DOI: 10.1021/acs.jpclett.0c01289] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2020] [Accepted: 06/09/2020] [Indexed: 05/27/2023]
Abstract
We report for the first time that the protonation behavior of weak polyelectrolyte brushes depends very strongly on ionic strength. The pKa changes by one pH step per order of magnitude in salt concentration. For low salt concentrations (∼1 mM), a very high pH is required to deprotonate a polyacidic brush and a very low pH is required to protonate a polybasic brush. This has major consequences for interactions with other macromolecules, as the brushes are actually almost fully neutral when believed to be charged. We propose that many previous studies on electrostatic interactions between polyelectrolytes and proteins have, in fact, looked at other types of intermolecular forces, in particular, hydrophobic interactions and hydrogen bonds.
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Affiliation(s)
| | | | - Andreas Dahlin
- Department of Chemistry and
Chemical Engineering, Chalmers University
of Technology, 41296 Gothenburg, Sweden
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9
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Wei W, Faubel JL, Selvakumar H, Kovari DT, Tsao J, Rivas F, Mohabir AT, Krecker M, Rahbar E, Hall AR, Filler MA, Washburn JL, Weigel PH, Curtis JE. Self-regenerating giant hyaluronan polymer brushes. Nat Commun 2019; 10:5527. [PMID: 31797934 PMCID: PMC6892876 DOI: 10.1038/s41467-019-13440-7] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2018] [Accepted: 11/08/2019] [Indexed: 12/25/2022] Open
Abstract
Tailoring interfaces with polymer brushes is a commonly used strategy to create functional materials for numerous applications. Existing methods are limited in brush thickness, the ability to generate high-density brushes of biopolymers, and the potential for regeneration. Here we introduce a scheme to synthesize ultra-thick regenerating hyaluronan polymer brushes using hyaluronan synthase. The platform provides a dynamic interface with tunable brush heights that extend up to 20 microns - two orders of magnitude thicker than standard brushes. The brushes are easily sculpted into micropatterned landscapes by photo-deactivation of the enzyme. Further, they provide a continuous source of megadalton hyaluronan or they can be covalently-stabilized to the surface. Stabilized brushes exhibit superb resistance to biofilms, yet are locally digested by fibroblasts. This brush technology provides opportunities in a range of arenas including regenerating tailorable biointerfaces for implants, wound healing or lubrication as well as fundamental studies of the glycocalyx and polymer physics.
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Affiliation(s)
- Wenbin Wei
- School of Physics, Georgia Institute of Technology, Atlanta, GA, USA
| | - Jessica L Faubel
- School of Physics, Georgia Institute of Technology, Atlanta, GA, USA
| | - Hemaa Selvakumar
- School of Physics, Georgia Institute of Technology, Atlanta, GA, USA
- Petit H. Parker Institute for Bioengineering and Bioscience, Georgia Institute of Technology, Atlanta, GA, USA
| | - Daniel T Kovari
- School of Physics, Georgia Institute of Technology, Atlanta, GA, USA
- Department of Physics, Emory University, Atlanta, GA, USA
| | - Joanna Tsao
- School of Chemical and Biomolecular Engineering, Georgia Institute of Technology, Atlanta, GA, USA
| | - Felipe Rivas
- Virginia Tech-Wake Forest University School of Biomedical Engineering and Sciences, Wake Forest School of Medicine, Winston-Salem, NC, USA
| | - Amar T Mohabir
- School of Chemical and Biomolecular Engineering, Georgia Institute of Technology, Atlanta, GA, USA
| | - Michelle Krecker
- School of Materials Science and Engineering, Georgia Institute of Technology, Atlanta, GA, USA
| | - Elaheh Rahbar
- Virginia Tech-Wake Forest University School of Biomedical Engineering and Sciences, Wake Forest School of Medicine, Winston-Salem, NC, USA
| | - Adam R Hall
- Virginia Tech-Wake Forest University School of Biomedical Engineering and Sciences, Wake Forest School of Medicine, Winston-Salem, NC, USA
| | - Michael A Filler
- School of Chemical and Biomolecular Engineering, Georgia Institute of Technology, Atlanta, GA, USA
| | - Jennifer L Washburn
- Department of Biochemistry and Molecular Biology, University of Oklahoma Health Sciences Center, Oklahoma City, OK, USA
| | - Paul H Weigel
- Department of Biochemistry and Molecular Biology, University of Oklahoma Health Sciences Center, Oklahoma City, OK, USA
| | - Jennifer E Curtis
- School of Physics, Georgia Institute of Technology, Atlanta, GA, USA.
- Petit H. Parker Institute for Bioengineering and Bioscience, Georgia Institute of Technology, Atlanta, GA, USA.
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10
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Ma L, Luo P, He Y, Zhang L, Fan Y, Jiang Z. Ultra-Stable Silica Nanoparticles as Nano-Plugging Additive for Shale Exploitation in Harsh Environments. NANOMATERIALS (BASEL, SWITZERLAND) 2019; 9:E1683. [PMID: 31775285 PMCID: PMC6955846 DOI: 10.3390/nano9121683] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/06/2019] [Revised: 11/20/2019] [Accepted: 11/21/2019] [Indexed: 12/24/2022]
Abstract
Owing to the harsh downhole environments, poor dispersion of silica at high salinity and high temperature can severely restrict its application as the nano-plugging agent in shale gas exploitation. The objective of this study is to improve salt tolerance and thermal stability of silica. Herein, silica was successfully functionalized with an anionic polymer (p SPMA) by SI-ATRP (surface-initiated atom transfer radical polymerization), named SiO2-g-SPMA. The grafted pSPMA brushes on silica provided sufficient electrostatic repulsion and steric repulsion for stabilizing silica in a harsh environment. The modified silica (SiO2-g-SPMA) had excellent colloidal stability at salinities up to 5.43 M NaCl (saturated brine) and standard API brine (8 wt% NaCl + 2 wt% CaCl2) for 30 days at room temperature. Simultaneously, the SiO2-g-SPMA was stable at 170 °C for 24 h as well as stable in weakly alkali environment. Furthermore, the plugging performance of SiO2-g-SPMA in water-based drilling fluids for low permeate reservoir reached to 78.25% when adding a small amount of 0.5 wt% SiO2-g-SPMA, which effectively hindered the water invasion into formation and protected the reservoir.
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Affiliation(s)
- Lan Ma
- School of Science, Xihua University, Jinzhou Road, Chengdu 610039, Sichuan, China;
- State Key Lab of Oil and Gas Reservoir Geology and Exploitation, Southwest Petroleum University, 8 Xindu Avenue, Chengdu 610500, Sichuan, China; (P.L.); (L.Z.)
| | - Pingya Luo
- State Key Lab of Oil and Gas Reservoir Geology and Exploitation, Southwest Petroleum University, 8 Xindu Avenue, Chengdu 610500, Sichuan, China; (P.L.); (L.Z.)
- College of Chemistry and Chemical Engineering, Southwest Petroleum University, 8 Xindu Avenue, Chengdu 610500, Sichuan, China;
| | - Yi He
- State Key Lab of Oil and Gas Reservoir Geology and Exploitation, Southwest Petroleum University, 8 Xindu Avenue, Chengdu 610500, Sichuan, China; (P.L.); (L.Z.)
- College of Chemistry and Chemical Engineering, Southwest Petroleum University, 8 Xindu Avenue, Chengdu 610500, Sichuan, China;
| | - Liyun Zhang
- State Key Lab of Oil and Gas Reservoir Geology and Exploitation, Southwest Petroleum University, 8 Xindu Avenue, Chengdu 610500, Sichuan, China; (P.L.); (L.Z.)
- College of Chemistry and Chemical Engineering, Southwest Petroleum University, 8 Xindu Avenue, Chengdu 610500, Sichuan, China;
| | - Yi Fan
- College of Chemistry and Chemical Engineering, Southwest Petroleum University, 8 Xindu Avenue, Chengdu 610500, Sichuan, China;
- Chengdu Graphene Application Institute of Industrial Technology, Leshan Road, Chengdu 610500, Sichuan, China
| | - Zhenju Jiang
- School of Science, Xihua University, Jinzhou Road, Chengdu 610039, Sichuan, China;
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11
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Faubel JL, Patel RP, Wei W, Curtis JE, Brettmann BK. Giant Hyaluronan Polymer Brushes Display Polyelectrolyte Brush Polymer Physics Behavior. ACS Macro Lett 2019; 8:1323-1327. [PMID: 35651165 DOI: 10.1021/acsmacrolett.9b00530] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Polyelectrolyte brushes are important stimuli-responsive materials in a variety of technological applications as well as in biological systems. Their small size, however, introduces characterization challenges, particularly in studying 3D structure and time-dependent behavior. In this Letter, we report on the polyelectrolyte brush behavior of extra-large hyaluronan brushes (∼15 μm) recently developed using an enzyme-mediated growth process. In response to increasing ionic strength, the brush displays the osmotic brush regime and the salted brush regime. We also show a collapse of 96% when the brush is placed in a poor solvent. This collapse is rapid when changing from a good to poor solvent, but re-expansion is slow when changing back to a good solvent. The observed brush behavior described in this Letter is similar to that seen for smaller polyelectrolyte brushes, indicating that these larger brushes may serve as model systems to study more complex phenomena through confocal microscopy.
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12
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Voerman D, Schluck M, Weiden J, Joosten B, Eggermont LJ, van den Eijnde T, Ignacio B, Cambi A, Figdor CG, Kouwer PHJ, Verdoes M, Hammink R, Rowan AE. Synthetic Semiflexible and Bioactive Brushes. Biomacromolecules 2019; 20:2587-2597. [PMID: 31150222 PMCID: PMC6620732 DOI: 10.1021/acs.biomac.9b00385] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/18/2019] [Revised: 05/29/2019] [Indexed: 11/29/2022]
Abstract
Polymer brushes are extensively used for the preparation of bioactive surfaces. They form a platform to attach functional (bio)molecules and control the physicochemical properties of the surface. These brushes are nearly exclusively prepared from flexible polymers, even though much stiffer brushes from semiflexible polymers are frequently found in nature, which exert bioactive functions that are out of reach for flexible brushes. Synthetic semiflexible polymers, however, are very rare. Here, we use polyisocyanopeptides (PICs) to prepare high-density semiflexible brushes on different substrate geometries. For bioconjugation, we developed routes with two orthogonal click reactions, based on the strain-promoted azide-alkyne cycloaddition reaction and the (photoactivated) tetrazole-ene cycloaddition reaction. We found that for high brush densities, multiple bonds between the polymer and the substrate are necessary, which was achieved in a block copolymer strategy. Whether the desired biomolecules are conjugated to the PIC polymer before or after brush formation depends on the dimensions and required densities of the biomolecules and the curvature of the substrate. In either case, we provide mild, aqueous, and highly modular reaction strategies, which make PICs a versatile addition to the toolbox for generating semiflexible bioactive polymer brush surfaces.
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Affiliation(s)
- Dion Voerman
- Department
of Tumor Immunology, Department of Cell Biology, and Microscopic Imaging Center, Radboud Institute for Molecular Life Sciences, Radboud
University Medical Center, Geert Grooteplein 26, 6525 GA Nijmegen, The Netherlands
| | - Marjolein Schluck
- Department
of Tumor Immunology, Department of Cell Biology, and Microscopic Imaging Center, Radboud Institute for Molecular Life Sciences, Radboud
University Medical Center, Geert Grooteplein 26, 6525 GA Nijmegen, The Netherlands
| | - Jorieke Weiden
- Department
of Tumor Immunology, Department of Cell Biology, and Microscopic Imaging Center, Radboud Institute for Molecular Life Sciences, Radboud
University Medical Center, Geert Grooteplein 26, 6525 GA Nijmegen, The Netherlands
| | - Ben Joosten
- Department
of Tumor Immunology, Department of Cell Biology, and Microscopic Imaging Center, Radboud Institute for Molecular Life Sciences, Radboud
University Medical Center, Geert Grooteplein 26, 6525 GA Nijmegen, The Netherlands
| | - Loek J. Eggermont
- Department
of Tumor Immunology, Department of Cell Biology, and Microscopic Imaging Center, Radboud Institute for Molecular Life Sciences, Radboud
University Medical Center, Geert Grooteplein 26, 6525 GA Nijmegen, The Netherlands
| | - Tuur van den Eijnde
- Department
of Molecular Materials, Institute for Molecules
and Materials, Radboud University, Heyendaalseweg 135, 6525 AJ Nijmegen, The Netherlands
| | - Bob Ignacio
- Department
of Molecular Materials, Institute for Molecules
and Materials, Radboud University, Heyendaalseweg 135, 6525 AJ Nijmegen, The Netherlands
| | - Alessandra Cambi
- Department
of Tumor Immunology, Department of Cell Biology, and Microscopic Imaging Center, Radboud Institute for Molecular Life Sciences, Radboud
University Medical Center, Geert Grooteplein 26, 6525 GA Nijmegen, The Netherlands
| | - Carl G. Figdor
- Department
of Tumor Immunology, Department of Cell Biology, and Microscopic Imaging Center, Radboud Institute for Molecular Life Sciences, Radboud
University Medical Center, Geert Grooteplein 26, 6525 GA Nijmegen, The Netherlands
| | - Paul H. J. Kouwer
- Department
of Molecular Materials, Institute for Molecules
and Materials, Radboud University, Heyendaalseweg 135, 6525 AJ Nijmegen, The Netherlands
| | - Martijn Verdoes
- Department
of Tumor Immunology, Department of Cell Biology, and Microscopic Imaging Center, Radboud Institute for Molecular Life Sciences, Radboud
University Medical Center, Geert Grooteplein 26, 6525 GA Nijmegen, The Netherlands
| | - Roel Hammink
- Department
of Tumor Immunology, Department of Cell Biology, and Microscopic Imaging Center, Radboud Institute for Molecular Life Sciences, Radboud
University Medical Center, Geert Grooteplein 26, 6525 GA Nijmegen, The Netherlands
| | - Alan E. Rowan
- Department
of Molecular Materials, Institute for Molecules
and Materials, Radboud University, Heyendaalseweg 135, 6525 AJ Nijmegen, The Netherlands
- Australian
Institute for Bioengineering and Nanotechnology, The University of Queensland, Brisbane, QLD 4072, Australia
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13
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Davies HS, Baranova NS, El Amri N, Coche-Guérente L, Verdier C, Bureau L, Richter RP, Débarre D. An integrated assay to probe endothelial glycocalyx-blood cell interactions under flow in mechanically and biochemically well-defined environments. Matrix Biol 2019; 78-79:47-59. [DOI: 10.1016/j.matbio.2018.12.002] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/13/2018] [Revised: 12/20/2018] [Accepted: 12/26/2018] [Indexed: 01/15/2023]
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14
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Chen X, Richter RP. Effect of calcium ions and pH on the morphology and mechanical properties of hyaluronan brushes. Interface Focus 2019; 9:20180061. [PMID: 30842869 PMCID: PMC6388027 DOI: 10.1098/rsfs.2018.0061] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 12/18/2018] [Indexed: 01/13/2023] Open
Abstract
Hyaluronan (HA) is a linear, regular polysaccharide that plays as a chief structural and functional component in peri- and extracellular matrices, thus contributing significantly to many basic cellular processes. To understand more comprehensively the response of the supramolecular organization of HA polymers to changes in their aqueous environment, we study the effects of Ca2+ concentration and pH on the morphology and rigidity of films of end-grafted HA polymers on planar supports (HA brushes), as a well-defined in vitro model system of HA-rich matrices, by reflection interference contrast microscopy and quartz crystal microbalance. The thickness and softness of HA brushes decrease significantly with Ca2+ concentration but do not change with pH, within the physiological ranges of these parameters. The effect of Ca2+ on HA brush thickness is virtually identical to the effect of Na+ at 10-fold higher concentrations. Moreover, the thickness and softness of HA brushes decrease appreciably upon HA protonation at pH less than 6. Effects of pH and calcium ions are fully reversible over large parameter ranges. These findings are relevant for understanding the supramolecular organization and dynamics of HA-rich matrices in biological systems and will also benefit the rational design of synthetic HA-rich materials with tailored properties.
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Affiliation(s)
| | - Ralf P. Richter
- CIC biomaGUNE, San Sebastian, Spain
- School of Biomedical Sciences, Faculty of Biological Sciences, University of Leeds, Leeds, UK
- School of Physics and Astronomy, Faculty of Mathematics and Physical Sciences, University of Leeds, Leeds, UK
- Astbury Centre of Structural Molecular Biology, University of Leeds, Leeds, UK
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15
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Zilman A. Aggregation, Phase Separation and Spatial Morphologies of the Assemblies of FG Nucleoporins. J Mol Biol 2018; 430:4730-4740. [DOI: 10.1016/j.jmb.2018.07.011] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/30/2018] [Revised: 07/03/2018] [Accepted: 07/09/2018] [Indexed: 11/17/2022]
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16
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Liu L, Hyeon C. From octopus to dendrite—Semiflexible polyelectrolyte brush condensates in trivalent counterion solution. J Chem Phys 2018; 149:163302. [DOI: 10.1063/1.5027161] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/16/2023] Open
Affiliation(s)
- Lei Liu
- Korea Institute for Advanced Study, Seoul 02455, South Korea
| | - Changbong Hyeon
- Korea Institute for Advanced Study, Seoul 02455, South Korea
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17
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Bano F, Tammi MI, Kang DW, Harris EN, Richter RP. Single-Molecule Unbinding Forces between the Polysaccharide Hyaluronan and Its Binding Proteins. Biophys J 2018; 114:2910-2922. [PMID: 29925027 PMCID: PMC6026378 DOI: 10.1016/j.bpj.2018.05.014] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/03/2018] [Revised: 04/30/2018] [Accepted: 05/07/2018] [Indexed: 12/11/2022] Open
Abstract
The extracellular polysaccharide hyaluronan (HA) is ubiquitous in all vertebrate tissues, where its various functions are encoded in the supramolecular complexes and matrices that it forms with HA-binding proteins (hyaladherins). In tissues, these supramolecular architectures are frequently subjected to mechanical stress, yet how this affects the intermolecular bonding is largely unknown. Here, we used a recently developed single-molecule force spectroscopy platform to analyze and compare the mechanical strength of bonds between HA and a panel of hyaladherins from the Link module superfamily, namely the complex of the proteoglycan aggrecan and cartilage link protein, the proteoglycan versican, the inflammation-associated protein TSG-6, the HA receptor for endocytosis (stabilin-2/HARE), and the HA receptor CD44. We find that the resistance to tensile stress for these hyaladherins correlates with the size of the HA-binding domain. The lowest mean rupture forces are observed for members of the type A subgroup (i.e., with the shortest HA-binding domains; TSG-6 and HARE). In contrast, the mechanical stability of the bond formed by aggrecan in complex with cartilage link protein (two members of the type C subgroup, i.e., with the longest HA-binding domains) and HA is equal or even superior to the high affinity streptavidin⋅biotin bond. Implications for the molecular mechanism of unbinding of HA⋅hyaladherin bonds under force are discussed, which underpin the mechanical properties of HA⋅hyaladherin complexes and HA-rich extracellular matrices.
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Affiliation(s)
- Fouzia Bano
- School of Biomedical Sciences, Faculty of Biological Sciences, School of Physics and Astronomy, Faculty of Mathematics and Physical Sciences, and Astbury Centre for Structural Molecular Biology, University of Leeds, Leeds, United Kingdom; CIC biomaGUNE, Biosurfaces Laboratory, Donostia-San Sebastian, Spain
| | - Markku I Tammi
- Institute of Biomedicine, University of Eastern Finland, Kuopio, Finland
| | - David W Kang
- Halozyme Therapeutics Inc., San Diego, California
| | - Edward N Harris
- Department of Biochemistry, University of Nebraska, Lincoln, Nebraska
| | - Ralf P Richter
- School of Biomedical Sciences, Faculty of Biological Sciences, School of Physics and Astronomy, Faculty of Mathematics and Physical Sciences, and Astbury Centre for Structural Molecular Biology, University of Leeds, Leeds, United Kingdom; CIC biomaGUNE, Biosurfaces Laboratory, Donostia-San Sebastian, Spain.
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18
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Davies HS, Débarre D, El Amri N, Verdier C, Richter RP, Bureau L. Elastohydrodynamic Lift at a Soft Wall. PHYSICAL REVIEW LETTERS 2018; 120:198001. [PMID: 29799224 DOI: 10.1103/physrevlett.120.198001] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/30/2017] [Revised: 03/02/2018] [Indexed: 06/08/2023]
Abstract
We study experimentally the motion of nondeformable microbeads in a linear shear flow close to a wall bearing a thin and soft polymer layer. Combining microfluidics and 3D optical tracking, we demonstrate that the steady-state bead-to-surface distance increases with the flow strength. Moreover, such lift is shown to result from flow-induced deformations of the layer, in quantitative agreement with theoretical predictions from elastohydrodynamics. This study thus provides the first experimental evidence of "soft lubrication" at play at small scale, in a system relevant, for example, to the physics of blood microcirculation.
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Affiliation(s)
| | | | - Nouha El Amri
- Université Grenoble Alpes, CNRS, LIPhy, 38000 Grenoble, France
| | - Claude Verdier
- Université Grenoble Alpes, CNRS, LIPhy, 38000 Grenoble, France
| | - Ralf P Richter
- School of Biomedical Sciences, Faculty of Biological Sciences, School of Physics and Astronomy, Faculty of Mathematics and Physical Sciences, Astbury Centre for Structural Molecular Biology, University of Leeds, Leeds LS2 9JT, United Kingdom
- CIC biomaGUNE, Paseo Miramon 182, 20014 San Sebastian, Spain
| | - Lionel Bureau
- Université Grenoble Alpes, CNRS, LIPhy, 38000 Grenoble, France
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19
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Willott JD, Murdoch TJ, Leermakers FAM, de Vos WM. Behavior of Weak Polyelectrolyte Brushes in Mixed Salt Solutions. Macromolecules 2018; 51:1198-1206. [PMID: 29472729 PMCID: PMC5814957 DOI: 10.1021/acs.macromol.7b02244] [Citation(s) in RCA: 20] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/20/2017] [Revised: 12/22/2017] [Indexed: 12/25/2022]
Abstract
![]()
Hydrophilic
and hydrophobic weak polybasic brushes immersed in
aqueous solutions of mixed salt counterions are considered using a
mean-field numerical self-consistent field approach. On top of the
solvent quality of the polymer, the counterion–solvent interactions
are accounted for by implementing Flory–Huggins interaction
parameters. We show that ion specificity within the brush can bring
about large changes in conformation. It is found that the collapse
transition of hydrophobic, weak polyelectrolyte brushes features an
intermediate two-phase state wherein a subset of chains are collapsed
in a dense layer at the substrate, while the remainder of chains are
well-solvated and strongly stretched away from the it. Besides pH
and ionic strength, solvent quality of counterions and the composition
of ions in the solvent are important control parameters for the behavior
of polyelectrolyte brushes. Increasingly hydrophobic counterions penetrate
deeper within the brush and stabilize the collapsed region, while
hydrophilic counterions do the opposite.
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Affiliation(s)
- Joshua D Willott
- Membrane Science and Technology, Mesa+ Institute for Nanotechnology, University of Twente, Enschede 7500 AE, The Netherlands
| | - Timothy J Murdoch
- Priority Research Centre for Advanced Particle Processing and Transport, University of Newcastle, Callaghan, NSW 2308, Australia
| | - Frans A M Leermakers
- Physical Chemistry and Soft Matter, Wageningen University and Research, Wageningen 6708 WE, The Netherlands
| | - Wiebe M de Vos
- Membrane Science and Technology, Mesa+ Institute for Nanotechnology, University of Twente, Enschede 7500 AE, The Netherlands
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20
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Ozmaian M, Jasnow D, Eskandari Nasrabad A, Zilman A, Coalson RD. Effects of cross-linking on partitioning of nanoparticles into a polymer brush: Coarse-grained simulations test simple approximate theories. J Chem Phys 2018; 148:024902. [DOI: 10.1063/1.4990796] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022] Open
Affiliation(s)
- Masoumeh Ozmaian
- Department of Chemistry, University of Pittsburgh, Pittsburgh, Pennsylvania 15260, USA
| | - David Jasnow
- Department of Physics and Astronomy, University of Pittsburgh, Pittsburgh, Pennsylvania 15260, USA
| | | | - Anton Zilman
- Department of Physics and Institute for Biomaterials and Biomedical Engineering, University of Toronto, Toronto, Ontario M5S 1A7, Canada
| | - Rob D. Coalson
- Department of Chemistry, University of Pittsburgh, Pittsburgh, Pennsylvania 15260, USA
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21
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Chin-Hun Kuo J, Gandhi JG, Zia RN, Paszek MJ. Physical biology of the cancer cell glycocalyx. NATURE PHYSICS 2018; 14:658-669. [PMID: 33859716 PMCID: PMC8046174 DOI: 10.1038/s41567-018-0186-9] [Citation(s) in RCA: 85] [Impact Index Per Article: 14.2] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/07/2023]
Abstract
The glycocalyx coating the outside of most cells is a polymer meshwork comprising proteins and complex sugar chains called glycans. From a physical perspective, the glycocalyx has long been considered a simple 'slime' that protects cells from mechanical disruption or against pathogen interactions, but the great complexity of the structure argues for the evolution of more advanced functionality: the glycocalyx serves as the complex physical environment within which cell-surface receptors reside and operate. Recent studies have demonstrated that the glycocalyx can exert thermodynamic and kinetic control over cell signalling by serving as the local medium within which receptors diffuse, assemble and function. The composition and structure of the glycocalyx change markedly with changes in cell state, including transformation. Notably, cancer-specific changes fuel the synthesis of monomeric building blocks and machinery for production of long-chain polymers that alter the physical and chemical structure of the glycocalyx. In this Review, we discuss these changes and their physical consequences on receptor function and emergent cell behaviours.
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Affiliation(s)
- Joe Chin-Hun Kuo
- Robert Frederick Smith School of Chemical and Biomolecular Engineering, Cornell University, Ithaca, NY, USA
| | - Jay G. Gandhi
- Robert Frederick Smith School of Chemical and Biomolecular Engineering, Cornell University, Ithaca, NY, USA
| | - Roseanna N. Zia
- Chemical Engineering, Stanford University, Stanford, CA, USA
| | - Matthew J. Paszek
- Robert Frederick Smith School of Chemical and Biomolecular Engineering, Cornell University, Ithaca, NY, USA
- Meinig School of Biomedical Engineering, Cornell University, Ithaca, NY, USA
- Field of Biophysics, Cornell University, Ithaca, NY, USA
- Correspondence should be addressed to M.J.P.
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22
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Dubacheva GV, Araya-Callis C, Geert Volbeda A, Fairhead M, Codée J, Howarth M, Richter RP. Controlling Multivalent Binding through Surface Chemistry: Model Study on Streptavidin. J Am Chem Soc 2017; 139:4157-4167. [PMID: 28234007 PMCID: PMC5364436 DOI: 10.1021/jacs.7b00540] [Citation(s) in RCA: 71] [Impact Index Per Article: 10.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/17/2017] [Indexed: 12/22/2022]
Abstract
Although multivalent binding to surfaces is an important tool in nanotechnology, quantitative information about the residual valency and orientation of surface-bound molecules is missing. To address these questions, we study streptavidin (SAv) binding to commonly used biotinylated surfaces such as supported lipid bilayers (SLBs) and self-assembled monolayers (SAMs). Stability and kinetics of SAv binding are characterized by quartz crystal microbalance with dissipation monitoring, while the residual valency of immobilized SAv is quantified using spectroscopic ellipsometry by monitoring binding of biotinylated probes. Purpose-designed SAv constructs having controlled valencies (mono-, di-, trivalent in terms of biotin-binding sites) are studied to rationalize the results obtained on regular (tetravalent) SAv. We find that divalent interaction of SAv with biotinylated surfaces is a strict requirement for stable immobilization, while monovalent attachment is reversible and, in the case of SLBs, leads to the extraction of biotinylated lipids from the bilayer. The surface density and lateral mobility of biotin, and the SAv surface coverage are all found to influence the average orientation and residual valency of SAv on a biotinylated surface. We demonstrate how the residual valency can be adjusted to one or two biotin binding sites per immobilized SAv by choosing appropriate surface chemistry. The obtained results provide means for the rational design of surface-confined supramolecular architectures involving specific biointeractions at tunable valency. This knowledge can be used for the development of well-defined bioactive coatings, biosensors and biomimetic model systems.
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Affiliation(s)
- Galina V. Dubacheva
- Biosurfaces
Lab, CIC biomaGUNE, Paseo Miramon 182, 20014 Donostia − San Sebastian, Spain
- PPSM
CNRS UMR8531, ENS Cachan, Université
Paris-Saclay, 61 Avenue du Président Wilson, 94235 Cachan, France
| | - Carolina Araya-Callis
- Biosurfaces
Lab, CIC biomaGUNE, Paseo Miramon 182, 20014 Donostia − San Sebastian, Spain
| | - Anne Geert Volbeda
- Leiden
Institute of Chemistry, Leiden University, P.O. Box 9502, 2300 RA Leiden, The Netherlands
| | - Michael Fairhead
- Department
of Biochemistry, University of Oxford, South Parks Road, Oxford OX1 3QU, United Kingdom
| | - Jeroen Codée
- Leiden
Institute of Chemistry, Leiden University, P.O. Box 9502, 2300 RA Leiden, The Netherlands
| | - Mark Howarth
- Department
of Biochemistry, University of Oxford, South Parks Road, Oxford OX1 3QU, United Kingdom
| | - Ralf P. Richter
- Biosurfaces
Lab, CIC biomaGUNE, Paseo Miramon 182, 20014 Donostia − San Sebastian, Spain
- School
of Biomedical Sciences and School of Physics and Astronomy, University of Leeds, Leeds LS2 9JT, United Kingdom
- Laboratory
of Interdisciplinary Physics, University
Grenoble Alpes − CNRS, 140 Rue de la Physique, 38402 Saint Martin d’Hères, France
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23
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Liu L, Pincus PA, Hyeon C. Heterogeneous Morphology and Dynamics of Polyelectrolyte Brush Condensates in Trivalent Counterion Solution. Macromolecules 2017. [DOI: 10.1021/acs.macromol.6b02685] [Citation(s) in RCA: 28] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
Affiliation(s)
- Lei Liu
- Korea Institute
for Advanced Study, Seoul 02455, Korea
| | - Philip A. Pincus
- Materials
and Physics Departments, University of California at Santa Barbara, Santa Barbara, California 93106, United States
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24
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Brettmann B, Pincus P, Tirrell M. Lateral Structure Formation in Polyelectrolyte Brushes Induced by Multivalent Ions. Macromolecules 2017. [DOI: 10.1021/acs.macromol.6b02563] [Citation(s) in RCA: 42] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
Affiliation(s)
- Blair Brettmann
- The
Institute for Molecular Engineering, The University of Chicago, 5640 S. Ellis Ave., Chicago, Illinois 60637, United States
| | - Philip Pincus
- Materials
Department, Room 3004 Materials Research Laboratory, University of California, Santa Barbara, Santa Barbara, California 93106, United States
| | - Matthew Tirrell
- The
Institute for Molecular Engineering, The University of Chicago, 5640 S. Ellis Ave., Chicago, Illinois 60637, United States
- The
Institute for Molecular Engineering, Argonne National Laboratory, 9700 Cass Avenue, Lemont, Illinois 60439, United States
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25
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Willott JD, Murdoch TJ, Webber GB, Wanless EJ. Physicochemical behaviour of cationic polyelectrolyte brushes. Prog Polym Sci 2017. [DOI: 10.1016/j.progpolymsci.2016.09.010] [Citation(s) in RCA: 32] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
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26
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Murdoch TJ, Willott JD, de Vos WM, Nelson A, Prescott SW, Wanless EJ, Webber GB. Influence of Anion Hydrophilicity on the Conformation of a Hydrophobic Weak Polyelectrolyte Brush. Macromolecules 2016. [DOI: 10.1021/acs.macromol.6b01897] [Citation(s) in RCA: 33] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Affiliation(s)
- Timothy J. Murdoch
- Priority Research
Centre for Advanced Particle Processing and Transport, University of Newcastle, Callaghan, NSW 2308, Australia
| | - Joshua D. Willott
- Priority Research
Centre for Advanced Particle Processing and Transport, University of Newcastle, Callaghan, NSW 2308, Australia
| | - Wiebe M. de Vos
- Membrane Science
and Technology, Mesa+ Institute for Nanotechnology, University of Twente, Enschede 7500 AE, Netherlands
| | - Andrew Nelson
- Australian
Nuclear Science and Technology Organisation, Lucas Heights, NSW 2234, Australia
| | - Stuart W. Prescott
- School of Chemical Engineering, UNSW Australia, UNSW Sydney, NSW 2052, Australia
| | - Erica J. Wanless
- Priority Research
Centre for Advanced Particle Processing and Transport, University of Newcastle, Callaghan, NSW 2308, Australia
| | - Grant B. Webber
- Priority Research
Centre for Advanced Particle Processing and Transport, University of Newcastle, Callaghan, NSW 2308, Australia
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27
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Vovk A, Gu C, Opferman MG, Kapinos LE, Lim RY, Coalson RD, Jasnow D, Zilman A. Simple biophysics underpins collective conformations of the intrinsically disordered proteins of the Nuclear Pore Complex. eLife 2016; 5. [PMID: 27198189 PMCID: PMC4874778 DOI: 10.7554/elife.10785] [Citation(s) in RCA: 62] [Impact Index Per Article: 7.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/11/2015] [Accepted: 03/24/2016] [Indexed: 12/13/2022] Open
Abstract
Nuclear Pore Complexes (NPCs) are key cellular transporter that control nucleocytoplasmic transport in eukaryotic cells, but its transport mechanism is still not understood. The centerpiece of NPC transport is the assembly of intrinsically disordered polypeptides, known as FG nucleoporins, lining its passageway. Their conformations and collective dynamics during transport are difficult to assess in vivo. In vitro investigations provide partially conflicting results, lending support to different models of transport, which invoke various conformational transitions of the FG nucleoporins induced by the cargo-carrying transport proteins. We show that the spatial organization of FG nucleoporin assemblies with the transport proteins can be understood within a first principles biophysical model with a minimal number of key physical variables, such as the average protein interaction strengths and spatial densities. These results address some of the outstanding controversies and suggest how molecularly divergent NPCs in different species can perform essentially the same function. DOI:http://dx.doi.org/10.7554/eLife.10785.001 Animal, plant and fungal cells contain a structure called the nucleus, inside which the genetic material of the cell is stored. For the cell to work properly, certain proteins and other molecules need to be able to enter and exit the nucleus. This transport is carried out by pore-like molecular “devices” known as Nuclear Pore Complexes, whose architecture and mode of operation are unique among cellular transporters. Nuclear Pore Complexes are charged with a daunting task of deciding which of the hundreds of molecules it conducts per second should go through and which should not. Small molecules can pass freely through Nuclear Pore Complexes. However, larger molecules can only pass through the pore efficiently if they are bound to specialized transport proteins that interact with the proteins – called FG nucleoporins – that line the pore. A unique feature of the FG nucleoporins is that, unlike typical proteins, they do not have a defined three-dimensional structure. Instead, they form a soft and pliable lining inside the Nuclear Pore Complex passageway. Exactly how interacting with transport proteins affects the structure and spatial arrangements of the FG nucleoporins in a way that allows them to control transport is not well understood. This is in part because existing experimental techniques are unable to study the structures of the FG nucleoporins in enough detail to track how they change during transport. The complexity and the diversity of the FG nucleoporins also make them difficult to model in detail. Vovk, Gu et al. have developed a theoretical model that is based on just three basic physical properties of the FG nucleoporins – their flexibility, their ability to interact with each other, and their binding with the transport proteins. Future work can refine the model by incorporating further molecular details about the interactions between FG nucleoporins and transport proteins. The predictions made by this simple model agree well with experimental results in a wide range of situations – from single molecules to complex spatial assemblies. They also explain why some of the experimental results appear to contradict each other and suggest how several outstanding controversies in the field can be reconciled. Because the model invokes only fundamental physical principles of FG nucleoporin assemblies, it shows that some of their general properties do not depend on the exact conditions. In particular, this might shed light on why Nuclear Pore Complexes in different organisms perform essentially the same function, although the details of their molecular structure may differ. This also suggests how the FG nucleoporins can be manipulated to build artificial devices based on the same principles. DOI:http://dx.doi.org/10.7554/eLife.10785.002
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Affiliation(s)
- Andrei Vovk
- Department of Physics, University of Toronto, Toronto, Canada
| | - Chad Gu
- Department of Physics, University of Toronto, Toronto, Canada
| | - Michael G Opferman
- Department of Physics and Astronomy, University of Pittsburgh, Pittsburgh, United States
| | - Larisa E Kapinos
- Biozentrum and the Swiss Nanoscience Institute, University of Basel, Basel, Switzerland
| | - Roderick Yh Lim
- Biozentrum and the Swiss Nanoscience Institute, University of Basel, Basel, Switzerland
| | - Rob D Coalson
- Department of Chemistry, University of Pittsburgh, Pittsburgh, United States
| | - David Jasnow
- Department of Physics and Astronomy, University of Pittsburgh, Pittsburgh, United States
| | - Anton Zilman
- Department of Physics, University of Toronto, Toronto, Canada.,Institute for Biomaterials and Biomedical Engineering, University of Toronto, Toronto, Canada
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28
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Minsky BB, Antoni CH, Boehm H. Controlled Immobilization Strategies to Probe Short Hyaluronan-Protein Interactions. Sci Rep 2016; 6:21608. [PMID: 26883791 PMCID: PMC4756360 DOI: 10.1038/srep21608] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/09/2015] [Accepted: 01/27/2016] [Indexed: 12/15/2022] Open
Abstract
Well-controlled grafting of small hyaluronan oligosaccharides (sHA) enables novel approaches to investigate biological processes such as angiogenesis, immune reactions and cancer metastasis. We develop two strategies for covalent attachment of sHA, a fast high-density adsorption and a two-layer system that allows tuning the density and mode of immobilization. We monitored the sHA adlayer formation and subsequent macromolecular interactions by label-free quartz crystal microbalance with dissipation (QCM-D). The modified surfaces are inert to unspecific protein adsorption, and yet retain the specific binding capacity of sHA. Thus they are an ideal tool to study the interactions of hyaluronan-binding proteins and short hyaluronan molecules as demonstrated by the specific recognition of LYVE-1 and aggrecan. Both hyaladherins recognize sHA and the binding is independent to the presence of the reducing end.
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Affiliation(s)
- Burcu Baykal Minsky
- Department of New Materials and Biosystems, Max Planck Institute for Intelligent Systems, Heisenbergstr. 3, D-70569 Stuttgart, Germany
- Department of Biophysical Chemistry, University of Heidelberg, INF 253, D-69120 Heidelberg, Germany
| | - Christiane H. Antoni
- Department of New Materials and Biosystems, Max Planck Institute for Intelligent Systems, Heisenbergstr. 3, D-70569 Stuttgart, Germany
- Department of Biophysical Chemistry, University of Heidelberg, INF 253, D-69120 Heidelberg, Germany
| | - Heike Boehm
- Department of New Materials and Biosystems, Max Planck Institute for Intelligent Systems, Heisenbergstr. 3, D-70569 Stuttgart, Germany
- Department of Biophysical Chemistry, University of Heidelberg, INF 253, D-69120 Heidelberg, Germany
- CSF Biomaterials and Cellular Biophysics, Max Planck Institute for Intelligent Systems
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De Gernier R, Curk T, Dubacheva GV, Richter RP, Mognetti BM. A new configurational bias scheme for sampling supramolecular structures. J Chem Phys 2015; 141:244909. [PMID: 25554182 DOI: 10.1063/1.4904727] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/02/2023] Open
Abstract
We present a new simulation scheme which allows an efficient sampling of reconfigurable supramolecular structures made of polymeric constructs functionalized by reactive binding sites. The algorithm is based on the configurational bias scheme of Siepmann and Frenkel and is powered by the possibility of changing the topology of the supramolecular network by a non-local Monte Carlo algorithm. Such a plan is accomplished by a multi-scale modelling that merges coarse-grained simulations, describing the typical polymer conformations, with experimental results accounting for free energy terms involved in the reactions of the active sites. We test the new algorithm for a system of DNA coated colloids for which we compute the hybridisation free energy cost associated to the binding of tethered single stranded DNAs terminated by short sequences of complementary nucleotides. In order to demonstrate the versatility of our method, we also consider polymers functionalized by receptors that bind a surface decorated by ligands. In particular, we compute the density of states of adsorbed polymers as a function of the number of ligand-receptor complexes formed. Such a quantity can be used to study the conformational properties of adsorbed polymers useful when engineering adsorption with tailored properties. We successfully compare the results with the predictions of a mean field theory. We believe that the proposed method will be a useful tool to investigate supramolecular structures resulting from direct interactions between functionalized polymers for which efficient numerical methodologies of investigation are still lacking.
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Affiliation(s)
- Robin De Gernier
- Center for Nonlinear Phenomena and Complex Systems, Université Libre de Bruxelles, Code Postal 231, Campus Plaine, B-1050 Brussels, Belgium
| | - Tine Curk
- Department of Chemistry, University of Cambridge, Cambridge CB2 1EW, United Kingdom
| | - Galina V Dubacheva
- Biosurfaces Unit, CIC biomaGUNE, Paseo Miramon 182, 20009 Donostia - San Sebastian, Spain
| | - Ralf P Richter
- Biosurfaces Unit, CIC biomaGUNE, Paseo Miramon 182, 20009 Donostia - San Sebastian, Spain
| | - Bortolo M Mognetti
- Center for Nonlinear Phenomena and Complex Systems, Université Libre de Bruxelles, Code Postal 231, Campus Plaine, B-1050 Brussels, Belgium
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D'Sa RA, Raj J, Dickinson PJ, McMahon MAS, McDowell DA, Meenan BJ. Protein, cell and bacterial response to atmospheric pressure plasma grafted hyaluronic acid on poly(methylmethacrylate). JOURNAL OF MATERIALS SCIENCE. MATERIALS IN MEDICINE 2015; 26:260. [PMID: 26449450 DOI: 10.1007/s10856-015-5586-0] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/03/2015] [Accepted: 09/25/2015] [Indexed: 06/05/2023]
Abstract
Hyaluronic acid (HA) has been immobilised on poly(methyl methacrylate) (PMMA) surfaces using a novel dielectric barrier discharge (DBD) plasma process for the purposes of repelling protein, cellular and bacterial adhesion in the context of improving the performance of ophthalmic devices. Grafting was achieved by the following steps: (1) treatment of the PMMA with a DBD plasma operating at atmospheric pressure, (2) amine functionalisation of the activated polymer surface by exposure to a 3-aminopropyltrimethoxysilane (APTMS) linker molecule and (3) reaction of HA with the surface bound amine. The mechanism and effectiveness of the grafting process was verified by surface analysis. XPS data indicates that the APTMS linker molecule binds to PMMA via the Si-O chemistry and has the required pendant amine moiety. The carboxylic acid moiety on HA then binds with this -NH2 group via standard carbodiimide chemistry. ToF-SIMS confirms the presence of a coherent HA layer the microstructure of which is verified by AFM. The plasma grafted HA coating surfaces showed a pronounced decrease in protein and cellular adhesion when tested with bovine serum albumin and human corneal epithelial cells, respectively. The ability of these coatings to resist bacterial adhesion was established using Staphylococcus aureus NTC8325. Interestingly, the coatings did not repel bacterial adhesion, indicating that the mechanism of adhesion of bacterial cells is different to that for the surface interactions of mammalian cells. It is proposed that this difference is a consequence of the specific HA conformation that occurs under the conditions employed here. Hence, it is apparent that the microstructure/architecture of the HA coatings is an important factor in fabricating surfaces intended to repel proteins, mammalian and bacterial cells.
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Affiliation(s)
- Raechelle A D'Sa
- Centre for Materials and Structures, University of Liverpool, Brownlow Hill, Liverpool, L69 3GH, UK.
- Nanotechnology and Integrated Bio-Engineering Centre (NIBEC), University of Ulster, Shore Road, Newtownabbey, BT37 0QB, UK.
| | - Jog Raj
- Nanotechnology and Integrated Bio-Engineering Centre (NIBEC), University of Ulster, Shore Road, Newtownabbey, BT37 0QB, UK
| | - Peter J Dickinson
- Nanotechnology and Integrated Bio-Engineering Centre (NIBEC), University of Ulster, Shore Road, Newtownabbey, BT37 0QB, UK
| | - M Ann S McMahon
- Biomedical Sciences Research Institute, School of Heath Sciences, University of Ulster, Shore Road, Newtownabbey, BT37 0QB, UK
| | - David A McDowell
- Biomedical Sciences Research Institute, School of Heath Sciences, University of Ulster, Shore Road, Newtownabbey, BT37 0QB, UK
| | - Brian J Meenan
- Nanotechnology and Integrated Bio-Engineering Centre (NIBEC), University of Ulster, Shore Road, Newtownabbey, BT37 0QB, UK
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Bano F, Carril M, Di Gianvincenzo P, Richter RP. Interaction of Hyaluronan with Cationic Nanoparticles. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2015; 31:8411-8420. [PMID: 26146006 DOI: 10.1021/acs.langmuir.5b01505] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
Abstract
The polysaccharide hyaluronan (HA) is a main component of peri- and extracellular matrix, and an attractive molecule for materials design in tissue engineering and nanomedicine. Here, we study the morphology of complexes that form upon interaction of nanometer-sized amine-coated gold particles with this anionic, linear, and regular biopolymer in solution and grafted to a surface. We find that cationic nanoparticles (NPs) have profound effects on HA morphology on the molecular and supramolecular scale. Quartz crystal microbalance (QCM-D) shows that depending on their relative abundance, cationic NPs promote either strong compaction or swelling of films of surface-grafted HA polymers (HA brushes). Transmission electron and atomic force microscopy reveal that the NPs do also give rise to complexes of distinct morphologies-compact nanoscopic spheres and extended microscopic fibers-upon interaction with HA polymers in solution. In particular, stable and hydrated spherical complexes of single HA polymers with NPs can be prepared when balancing the ionizable groups on HA and NPs. The observed self-assembly phenomena could be useful for the design of drug delivery vehicles and a better understanding of the reorganization of HA-rich synthetic or biological matrices.
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Affiliation(s)
- Fouzia Bano
- †CIC biomaGUNE, Paseo Miramon 182, 20009 Donostia - San Sebastian, Spain
| | - Mónica Carril
- †CIC biomaGUNE, Paseo Miramon 182, 20009 Donostia - San Sebastian, Spain
- §Ikerbasque, Basque Foundation for Science, 48011 Bilbao, Spain
| | - Paolo Di Gianvincenzo
- †CIC biomaGUNE, Paseo Miramon 182, 20009 Donostia - San Sebastian, Spain
- ‡CIBER-BNN, Paseo Miramon 182, 20009 Donostia - San Sebastian, Spain
| | - Ralf P Richter
- †CIC biomaGUNE, Paseo Miramon 182, 20009 Donostia - San Sebastian, Spain
- ∥Université Grenoble Alpes, Grenoble 38041 Cedex 9, France
- ⊥CNRS, DCM, BP 53, Grenoble 38041 Cedex 9, France
- #Max-Planck-Institute for Intelligent Systems, Heisenbergstrasse 3, 70569 Stuttgart, Germany
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Willott JD, Murdoch TJ, Humphreys BA, Edmondson S, Wanless EJ, Webber GB. Anion-specific effects on the behavior of pH-sensitive polybasic brushes. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2015; 31:3707-3717. [PMID: 25768282 DOI: 10.1021/acs.langmuir.5b00116] [Citation(s) in RCA: 51] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
Abstract
The anion-specific solvation and conformational behavior of weakly basic poly(2-dimethylamino)ethyl methacrylate (poly(DMA)), poly(2-diethylamino)ethyl methacrylate (poly(DEA)), and poly(2-diisopropylamino)ethyl methacrylate (poly(DPA)) brushes, with correspondingly increasing inherent hydrophobicity, have been investigated using in situ ellipsometric and quartz crystal microbalance with dissipation (QCM-D) measurements. In the osmotic brush regime, as the initial low concentration of salt is increased, the brushes osmotically swell by the uptake of solvent as they become charged and the attractive hydrophobic inter- and intrachain interactions are overcome. With increased ionic strength, the brushes move into the salted brush regime where they desolvate and collapse as their electrostatic charge is screened. Here, as the brushes collapse, they transition to more uniform and rigid conformations, which dissipate less energy, than similarly solvated brushes at lower ionic strength. Significantly, in these distinct regimes brush behavior is not only ionic strength dependent but is also influenced by the nature of the added salt based on its position in the well-known Hofmeister or lyotropic series, with potassium acetate, nitrate, and thiocyanate investigated. The strongly kosmotropic acetate anions display low affinity for the hydrophobic polymers, and largely unscreened electrosteric repulsions allow the brushes to remain highly solvated at higher acetate concentrations. The mildly chaotropic nitrate and strongly chaotropic thiocyanate anions exhibit a polymer hydrophobicity-dependent affinity for the brushes. Increasing thiocyanate concentration causes the brushes to collapse at lower ionic strength than for the other two anions. This study of weak polybasic brushes demonstrates the importance of all ion, solvent, and polymer interactions.
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Affiliation(s)
- Joshua D Willott
- †Priority Research Centre for Advanced Particle Processing and Transport, University of Newcastle, Callaghan, NSW 2308, Australia
| | - Timothy J Murdoch
- †Priority Research Centre for Advanced Particle Processing and Transport, University of Newcastle, Callaghan, NSW 2308, Australia
| | - Ben A Humphreys
- †Priority Research Centre for Advanced Particle Processing and Transport, University of Newcastle, Callaghan, NSW 2308, Australia
| | - Steve Edmondson
- ‡School of Materials, University of Manchester, Oxford Road, Manchester M13 9PL, United Kingdom
| | - Erica J Wanless
- †Priority Research Centre for Advanced Particle Processing and Transport, University of Newcastle, Callaghan, NSW 2308, Australia
| | - Grant B Webber
- †Priority Research Centre for Advanced Particle Processing and Transport, University of Newcastle, Callaghan, NSW 2308, Australia
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Affiliation(s)
- O. V. Borisov
- CNRS,
UMR 5254, Institut des Sciences Analytiques et de Physico-Chimie pour
l’Environnement et les Matériaux, Université de Pau et des Pays de l’Adour, Pau 64053, France
- Institute
of Macromolecular Compounds, Russian Academy of Sciences, St. Petersburg 199004, Russia
- St. Petersburg National
University of Informational Technologies, Mechanics and Optics, St. Petersburg 197101, Russia
| | - E. B. Zhulina
- Institute
of Macromolecular Compounds, Russian Academy of Sciences, St. Petersburg 199004, Russia
- St. Petersburg National
University of Informational Technologies, Mechanics and Optics, St. Petersburg 197101, Russia
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Cuellar JL, Llarena I, Iturri JJ, Donath E, Moya SE. A novel approach for measuring the intrinsic nanoscale thickness of polymer brushes by means of atomic force microscopy: application of a compressible fluid model. NANOSCALE 2013; 5:11679-11685. [PMID: 24101034 DOI: 10.1039/c3nr02929h] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/02/2023]
Abstract
The thickness of a poly(sulfo propyl methacrylate) (PSPM) brush is determined by Atomic Force Microscopy (AFM) imaging as a function of the loading force at different ionic strengths, ranging from Milli-Q water to 1 M NaCl. Imaging is performed both with a sharp tip and a colloidal probe. The brush thickness strongly depends both on the applied load and on the ionic strength. A brush thickness of 150 nm is measured in Millipore water when applying the minimal loading force. Imaging with an 8 μm silica particle as a colloidal probe results in a thickness of 30 nm larger than that measured with the tip. Increasing the ionic strength causes the well known reduction of the thickness of the brush. The apparent thickness of the brush decreases with increasing loading forces. An empirical model analogous to that of a compressible fluid is applied to describe the dependence of the apparent thickness of the brush with loading force. The model comprises three ionic strength dependent parameters for the brush: thickness at infinite compression, energy, and cohesive force. The meaning and significance of these parameters are discussed. A particular advantage of the model is that it allows for determination of the brush thickness at zero loading force.
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Affiliation(s)
- José Luis Cuellar
- Institute of Biophysics and Medical Physics, Faculty of Medicine, University of Leipzig, Leipzig, Germany.
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Attili S, Richter RP. Self-assembly and elasticity of hierarchical proteoglycan–hyaluronan brushes ††Electronic supplementary information (ESI) available: Variations in areal mass density upon SLB and SAv monolayer formation determined by SE (Fig. S1). See DOI: 10.1039/c3sm51213dClick here for additional data file. . SOFT MATTER 2013; 9. [PMCID: PMC4080815 DOI: 10.1039/c3sm51213d] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/05/2023]
Abstract
We assemble aggrecan-containing hyaluronan brushes to study how the supramolecular structure and dynamics relate to material properties in hyaluronan-rich pericellular matrices.
Spatially confined yet strongly hydrated assemblies made from the proteoglycan aggrecan and the polysaccharide hyaluronan (HA) are major, functionally important components of the pericellular space around chondrocytes, and in cartilage. To better understand, how mechanical properties arise from the supramolecular structure and dynamics of such assemblies, we have studied the effect of aggrecan on the physico-chemical properties of well-defined, planar HA brushes. From interaction studies by quartz crystal microbalance with dissipation monitoring and spectroscopic ellipsometry, and compression studies by combined colloidal probe atomic force/reflection interference contrast microscopy, we find that aggrecan readily intercalates into HA brushes in a reversible manner. Aggrecan induces a drastic swelling of HA brushes, generating self-assembled films of several micrometers in thickness that are highly hydrated (>99%), elastic and very soft. The Young modulus in the linear compression regime is well below 100 Pa, and reaches several kPa at strong compression. The implications of these findings for biological function are discussed.
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Affiliation(s)
- Seetharamaiah Attili
- CIC biomaGUNE , Biosurfaces Unit , Paseo Miramon 182 , 20009 San Sebastian , Spain . ; Tel: +34 943 0053 29
- Max Planck Institute for Intelligent Systems , Heisenbergstraße 3 , 70569 Stuttgart , Germany
| | - Ralf P. Richter
- CIC biomaGUNE , Biosurfaces Unit , Paseo Miramon 182 , 20009 San Sebastian , Spain . ; Tel: +34 943 0053 29
- Max Planck Institute for Intelligent Systems , Heisenbergstraße 3 , 70569 Stuttgart , Germany
- J. Fourier University , Department of Molecular Chemistry , Laboratory I2BM , 570 Rue de la Chimie , 38041 Grenoble Cedex 9 , France
- University of the Basque Country , Department of Biochemistry and Molecular Biology , Barrio Sarriena s/n , 48940 Leioa , Spain
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Baranova NS, Foulcer SJ, Briggs DC, Tilakaratna V, Enghild JJ, Milner CM, Day AJ, Richter RP. Inter-α-inhibitor impairs TSG-6-induced hyaluronan cross-linking. J Biol Chem 2013; 288:29642-53. [PMID: 24005673 PMCID: PMC3795262 DOI: 10.1074/jbc.m113.477422] [Citation(s) in RCA: 55] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/16/2013] [Revised: 08/31/2013] [Indexed: 12/05/2022] Open
Abstract
Under inflammatory conditions and in the matrix of the cumulus-oocyte complex, the polysaccharide hyaluronan (HA) becomes decorated covalently with heavy chains (HCs) of the serum glycoprotein inter-α-inhibitor (IαI). This alters the functional properties of the HA as well as its structural role within extracellular matrices. The covalent transfer of HCs from IαI to HA is catalyzed by TSG-6 (tumor necrosis factor-stimulated gene-6), but TSG-6 is also known as a HA cross-linker that induces condensation of the HA matrix. Here, we investigate the interplay of these two distinct functions of TSG-6 by studying the ternary interactions of IαI and TSG-6 with well defined films of end-grafted HA chains. We demonstrate that TSG-6-mediated cross-linking of HA films is impaired in the presence of IαI and that this effect suppresses the TSG-6-mediated enhancement of HA binding to CD44-positive cells. Furthermore, we find that the interaction of TSG-6 and IαI in the presence of HA gives rise to two types of complexes that independently promote the covalent transfer of heavy chains to HA. One type of complex interacts very weakly with HA and is likely to correspond to the previously reported covalent HC·TSG-6 complexes. The other type of complex is novel and binds stably but noncovalently to HA. Prolonged incubation with TSG-6 and IαI leads to HA films that contain, in addition to covalently HA-bound HCs, several tightly but noncovalently bound molecular species. These findings have important implications for understanding how the biological activities of TSG-6 are regulated, such that the presence or absence of IαI will dictate its function.
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Affiliation(s)
- Natalia S. Baranova
- From the Biosurfaces Unit, CIC biomaGUNE, 20009 Donostia-San Sebastian, Spain
| | | | | | | | - Jan J. Enghild
- the Department of Molecular Biology and Genetics, University of Aarhus, 8000 Aarhus C, Denmark
| | - Caroline M. Milner
- the Faculty of Life Sciences, University of Manchester, Manchester M13 9PT, United Kingdom
| | | | - Ralf P. Richter
- From the Biosurfaces Unit, CIC biomaGUNE, 20009 Donostia-San Sebastian, Spain
- the Max Planck Institute for Intelligent Systems, 70569 Stuttgart, Germany, and
- the Department of Molecular Chemistry, Joseph Fourier University, 38041 Grenoble Cedex 9, France
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Lopez-Rodriguez E, Cruz A, Richter RP, Taeusch HW, Pérez-Gil J. Transient exposure of pulmonary surfactant to hyaluronan promotes structural and compositional transformations into a highly active state. J Biol Chem 2013; 288:29872-81. [PMID: 23983120 DOI: 10.1074/jbc.m113.493957] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022] Open
Abstract
Pulmonary surfactant is a lipid-protein complex that lowers surface tension at the respiratory air-liquid interface, stabilizing the lungs against physical forces tending to collapse alveoli. Dysfunction of surfactant is associated with respiratory pathologies such as acute respiratory distress syndrome or meconium aspiration syndrome where naturally occurring surfactant-inhibitory agents such as serum, meconium, or cholesterol reach the lung. We analyzed the effect of hyaluronan (HA) on the structure and surface behavior of pulmonary surfactant to understand the mechanism for HA-promoted surfactant protection in the presence of inhibitory agents. In particular, we found that HA affects structural properties such as the aggregation state of surfactant membranes and the size, distribution, and order/packing of phase-segregated lipid domains. These effects do not require a direct interaction between surfactant complexes and HA and are accompanied by a compositional reorganization of large surfactant complexes that become enriched with saturated phospholipid species. HA-exposed surfactant reaches very high efficiency in terms of rapid and spontaneous adsorption of surfactant phospholipids at the air-liquid interface and shows significantly improved resistance to inactivation by serum or cholesterol. We propose that physical effects pertaining to the formation of a meshwork of interpenetrating HA polymer chains are responsible for the changes in surfactant structure and composition that enhance surfactant function and, thus, resistance to inactivation. The higher resistance of HA-exposed surfactant to inactivation persists even after removal of the polymer, suggesting that transient exposure of surfactant to polymers like HA could be a promising strategy for the production of more efficient therapeutic surfactant preparations.
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Affiliation(s)
- Elena Lopez-Rodriguez
- From the Departamento de Bioquimica y Biologia Molecular, Facultad de Biologia, Universidad Complutense, 28040 Madrid, Spain
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38
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Jusufi A, Borisov O, Ballauff M. Structure formation in polyelectrolytes induced by multivalent ions. POLYMER 2013. [DOI: 10.1016/j.polymer.2012.12.030] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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Zhulina EB, Boulakh AB, Borisov OV. Repulsive Forces between Spherical Polyelectrolyte Brushes in Salt-Free Solution. ACTA ACUST UNITED AC 2012. [DOI: 10.1524/zpch.2012.0279] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Abstract
Abstract
Interaction forces between two colloidal spherical polyelectrolyte brushes in salt-free solution are calculated within Derjaguin approximation on the basis of self-consistent field Poisson–Boltzmann theory of a planar polyelectrolyte brush (E. B. Zhulina, O. V. Borisov, J. Chem. Phys. 107 (1997) 5952). It is demonstrated that at large separations the force-distance curve has a universal form which is independent of the charge density of the brush. At small separations the repulsive force is controlled by osmotic pressure of the counterions confined inside compressed brush. The crossover between these two regimes corresponds to the distance between the surfaces comparable to (double) thickness of a brush and occurs either continuously or with abrupt variation in the magnitude of the repulsive force. The latter is the case if the interacting brushes are found in the osmotic regime, that is, most of the counterions are retained in the intra-brush volume.
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Affiliation(s)
- Ekaterina B. Zhulina
- Institute of Macromolecular Compounds, Russian Academy of Sciences, St. Petersburg, Russische Föderation
| | - Andrey B. Boulakh
- St. Petersburg State Polytechnical University, St. Petersburg, Russische Föderation
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