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For: Yongye AB, Byler K, Santos R, Martínez-Mayorga K, Maggiora GM, Medina-Franco JL. Consensus Models of Activity Landscapes with Multiple Chemical, Conformer, and Property Representations. J Chem Inf Model 2011;51:1259-70. [DOI: 10.1021/ci200081k] [Citation(s) in RCA: 56] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Number Cited by Other Article(s)
1
Baygi SF, Barupal DK. IDSL_MINT: a deep learning framework to predict molecular fingerprints from mass spectra. J Cheminform 2024;16:8. [PMID: 38238779 PMCID: PMC10797927 DOI: 10.1186/s13321-024-00804-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/22/2023] [Accepted: 01/14/2024] [Indexed: 01/22/2024]  Open
2
Olmedo DA, Durant-Archibold AA, López-Pérez JL, Medina-Franco JL. Design and Diversity Analysis of Chemical Libraries in Drug Discovery. Comb Chem High Throughput Screen 2024;27:502-515. [PMID: 37409545 DOI: 10.2174/1386207326666230705150110] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/05/2023] [Revised: 05/30/2023] [Accepted: 05/30/2023] [Indexed: 07/07/2023]
3
Weber JK, Morrone JA, Bagchi S, Pabon JDE, Kang SG, Zhang L, Cornell WD. Simplified, interpretable graph convolutional neural networks for small molecule activity prediction. J Comput Aided Mol Des 2021;36:391-404. [PMID: 34817762 PMCID: PMC9325818 DOI: 10.1007/s10822-021-00421-6] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/09/2021] [Accepted: 09/24/2021] [Indexed: 12/11/2022]
4
Spiers RC, Kalivas JH. Reliable Model Selection without Reference Values by Utilizing Model Diversity with Prediction Similarity. J Chem Inf Model 2021;61:2220-2230. [PMID: 33900749 DOI: 10.1021/acs.jcim.0c01493] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
5
Maggiora G, Medina-Franco JL, Iqbal J, Vogt M, Bajorath J. From Qualitative to Quantitative Analysis of Activity and Property Landscapes. J Chem Inf Model 2020;60:5873-5880. [PMID: 33205984 DOI: 10.1021/acs.jcim.0c01249] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
6
Iqbal J, Vogt M, Bajorath J. Quantitative Comparison of Three-Dimensional Activity Landscapes of Compound Data Sets Based upon Topological Features. ACS OMEGA 2020;5:24111-24117. [PMID: 32984733 PMCID: PMC7513547 DOI: 10.1021/acsomega.0c03659] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/30/2020] [Accepted: 08/27/2020] [Indexed: 05/07/2023]
7
Iqbal J, Vogt M, Bajorath J. Computational Method for Quantitative Comparison of Activity Landscapes on the Basis of Image Data. Molecules 2020;25:E3952. [PMID: 32872506 PMCID: PMC7504767 DOI: 10.3390/molecules25173952] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/20/2020] [Revised: 08/21/2020] [Accepted: 08/27/2020] [Indexed: 01/31/2023]  Open
8
López-López E, Rabal O, Oyarzabal J, Medina-Franco JL. Towards the understanding of the activity of G9a inhibitors: an activity landscape and molecular modeling approach. J Comput Aided Mol Des 2020;34:659-669. [PMID: 32060676 DOI: 10.1007/s10822-020-00298-x] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/06/2019] [Accepted: 02/07/2020] [Indexed: 11/26/2022]
9
Predicting protein-ligand interactions based on bow-pharmacological space and Bayesian additive regression trees. Sci Rep 2019;9:7703. [PMID: 31118426 PMCID: PMC6531441 DOI: 10.1038/s41598-019-43125-6] [Citation(s) in RCA: 27] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2017] [Accepted: 04/12/2019] [Indexed: 02/08/2023]  Open
10
Activity Landscape and Molecular Modeling to Explore the SAR of Dual Epigenetic Inhibitors: A Focus on G9a and DNMT1. Molecules 2018;23:molecules23123282. [PMID: 30544967 PMCID: PMC6321328 DOI: 10.3390/molecules23123282] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/24/2018] [Revised: 12/09/2018] [Accepted: 12/10/2018] [Indexed: 11/17/2022]  Open
11
Miyao T, Funatsu K, Bajorath J. Three-Dimensional Activity Landscape Models of Different Design and Their Application to Compound Mapping and Potency Prediction. J Chem Inf Model 2018;59:993-1004. [DOI: 10.1021/acs.jcim.8b00661] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
12
Vogt M. Progress with modeling activity landscapes in drug discovery. Expert Opin Drug Discov 2018;13:605-615. [PMID: 29656681 DOI: 10.1080/17460441.2018.1465926] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
13
Saldívar-González FI, Naveja JJ, Palomino-Hernández O, Medina-Franco JL. Getting SMARt in drug discovery: chemoinformatics approaches for mining structure–multiple activity relationships. RSC Adv 2017. [DOI: 10.1039/c6ra26230a] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]  Open
14
García-Sánchez MO, Cruz-Monteagudo M, Medina-Franco JL. Quantitative Structure-Epigenetic Activity Relationships. CHALLENGES AND ADVANCES IN COMPUTATIONAL CHEMISTRY AND PHYSICS 2017. [DOI: 10.1007/978-3-319-56850-8_8] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
15
Activity and property landscape modeling is at the interface of chemoinformatics and medicinal chemistry. Future Med Chem 2016;7:1197-211. [PMID: 26132526 DOI: 10.4155/fmc.15.51] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]  Open
16
Naveja JJ, Medina-Franco JL. Activity landscape of DNA methyltransferase inhibitors bridges chemoinformatics with epigenetic drug discovery. Expert Opin Drug Discov 2015;10:1059-70. [DOI: 10.1517/17460441.2015.1073257] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2023]
17
Pérez-Villanueva J, Méndez-Lucio O, Soria-Arteche O, Medina-Franco JL. Activity cliffs and activity cliff generators based on chemotype-related activity landscapes. Mol Divers 2015;19:1021-35. [PMID: 26150300 DOI: 10.1007/s11030-015-9609-z] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/15/2015] [Accepted: 06/24/2015] [Indexed: 12/26/2022]
18
Méndez-Lucio O, Kooistra AJ, Graaf CD, Bender A, Medina-Franco JL. Analyzing Multitarget Activity Landscapes Using Protein–Ligand Interaction Fingerprints: Interaction Cliffs. J Chem Inf Model 2015;55:251-62. [DOI: 10.1021/ci500721x] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
19
Naveja JJ, Medina-Franco JL. Activity landscape sweeping: insights into the mechanism of inhibition and optimization of DNMT1 inhibitors. RSC Adv 2015. [DOI: 10.1039/c5ra12339a] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]  Open
20
Cruz-Monteagudo M, Medina-Franco JL, Pérez-Castillo Y, Nicolotti O, Cordeiro MND, Borges F. Activity cliffs in drug discovery: Dr Jekyll or Mr Hyde? Drug Discov Today 2014;19:1069-80. [DOI: 10.1016/j.drudis.2014.02.003] [Citation(s) in RCA: 77] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/22/2013] [Revised: 01/23/2014] [Accepted: 02/10/2014] [Indexed: 10/25/2022]
21
Rojas-Aguirre Y, Medina-Franco JL. Analysis of structure-Caco-2 permeability relationships using a property landscape approach. Mol Divers 2014;18:599-610. [DOI: 10.1007/s11030-014-9514-x] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/03/2013] [Accepted: 02/28/2014] [Indexed: 12/14/2022]
22
Guha R, Medina-Franco JL. On the validity versus utility of activity landscapes: are all activity cliffs statistically significant? J Cheminform 2014;6:11. [PMID: 24694189 PMCID: PMC4021161 DOI: 10.1186/1758-2946-6-11] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/25/2013] [Accepted: 03/25/2014] [Indexed: 02/06/2023]  Open
23
Medina-Franco JL, Méndez-Lucio O, Martinez-Mayorga K. The Interplay Between Molecular Modeling and Chemoinformatics to Characterize Protein–Ligand and Protein–Protein Interactions Landscapes for Drug Discovery. ADVANCES IN PROTEIN CHEMISTRY AND STRUCTURAL BIOLOGY 2014;96:1-37. [DOI: 10.1016/bs.apcsb.2014.06.001] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
24
Santos RG, Giulianotti MA, Houghten RA, Medina-Franco JL. Conditional probabilistic analysis for prediction of the activity landscape and relative compound activities. J Chem Inf Model 2013;53:2613-25. [PMID: 23971977 PMCID: PMC3850180 DOI: 10.1021/ci400243e] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
25
Yongye AB, Medina-Franco JL. Toward an Efficient Approach to Identify Molecular Scaffolds Possessing Selective or Promiscuous Compounds. Chem Biol Drug Des 2013;82:367-75. [DOI: 10.1111/cbdd.12162] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/19/2012] [Revised: 04/12/2013] [Accepted: 04/17/2013] [Indexed: 01/09/2023]
26
Bajorath J. Large-scale SAR analysis. DRUG DISCOVERY TODAY. TECHNOLOGIES 2013;10:e419-e426. [PMID: 24050139 DOI: 10.1016/j.ddtec.2013.01.002] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/02/2023]
27
Vogt M, Iyer P, Maggiora GM, Bajorath J. Conditional Probabilities of Activity Landscape Features for Individual Compounds. J Chem Inf Model 2013;53:1602-12. [DOI: 10.1021/ci400288r] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
28
Medina-Franco JL, Edwards BS, Pinilla C, Appel JR, Giulianotti MA, Santos RG, Yongye AB, Sklar LA, Houghten RA. Rapid scanning structure-activity relationships in combinatorial data sets: identification of activity switches. J Chem Inf Model 2013;53:1475-85. [PMID: 23705689 DOI: 10.1021/ci400192y] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2023]
29
Stumpfe D, Dimova D, Heikamp K, Bajorath J. Compound Pathway Model To Capture SAR Progression: Comparison of Activity Cliff-Dependent and -Independent Pathways. J Chem Inf Model 2013;53:1067-72. [DOI: 10.1021/ci400141w] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
30
Yongye AB, Medina-Franco JL. Systematic characterization of structure-activity relationships and ADMET compliance: a case study. Drug Discov Today 2013;18:732-9. [PMID: 23583765 DOI: 10.1016/j.drudis.2013.04.002] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/24/2012] [Revised: 03/18/2013] [Accepted: 04/04/2013] [Indexed: 01/29/2023]
31
Medina-Franco JL, Yoo J. Docking of a novel DNA methyltransferase inhibitor identified from high-throughput screening: insights to unveil inhibitors in chemical databases. Mol Divers 2013;17:337-44. [PMID: 23447100 DOI: 10.1007/s11030-013-9428-z] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/18/2012] [Accepted: 02/07/2013] [Indexed: 12/21/2022]
32
Pérez-Villanueva J, Méndez-Lucio O, Soria-Arteche O, Izquierdo T, Concepción Lozada M, Gloria-Greimel WA, Medina-Franco JL. Cyclic Systems Distribution Along Similarity Measures: Insights for an Application to Activity Landscape Modeling. Mol Inform 2013;32:179-90. [DOI: 10.1002/minf.201200127] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/22/2012] [Accepted: 12/21/2012] [Indexed: 12/12/2022]
33
Guha R. On exploring structure-activity relationships. Methods Mol Biol 2013;993:81-94. [PMID: 23568465 PMCID: PMC4852705 DOI: 10.1007/978-1-62703-342-8_6] [Citation(s) in RCA: 72] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
34
Medina-Franco JL, Yongye AB, Pérez-Villanueva J, Houghten RA, Martínez-Mayorga K. Activity-difference maps and consensus similarity measure characterize structure-activity relationships. J Cheminform 2012. [PMCID: PMC3341234 DOI: 10.1186/1758-2946-4-s1-p24] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]  Open
35
Medina-Franco JL, Martínez-Mayorga K, Peppard TL, Del Rio A. Chemoinformatic analysis of GRAS (Generally Recognized as Safe) flavor chemicals and natural products. PLoS One 2012;7:e50798. [PMID: 23226386 PMCID: PMC3511266 DOI: 10.1371/journal.pone.0050798] [Citation(s) in RCA: 33] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/28/2012] [Accepted: 10/24/2012] [Indexed: 12/15/2022]  Open
36
Méndez-Lucio O, Pérez-Villanueva J, Castillo R, Medina-Franco JL. Identifying Activity Cliff Generators of PPAR Ligands Using SAS Maps. Mol Inform 2012;31:837-46. [DOI: 10.1002/minf.201200078] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/21/2012] [Accepted: 10/06/2012] [Indexed: 01/27/2023]
37
Medina-Franco JL. Interrogating Novel Areas of Chemical Space for Drug Discovery using Chemoinformatics. Drug Dev Res 2012. [DOI: 10.1002/ddr.21034] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
38
Medina-Franco JL. Scanning structure-activity relationships with structure-activity similarity and related maps: from consensus activity cliffs to selectivity switches. J Chem Inf Model 2012;52:2485-93. [PMID: 22989212 DOI: 10.1021/ci300362x] [Citation(s) in RCA: 53] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
39
Waddell J, Medina-Franco JL. Bioactivity landscape modeling: Chemoinformatic characterization of structure–activity relationships of compounds tested across multiple targets. Bioorg Med Chem 2012;20:5443-52. [DOI: 10.1016/j.bmc.2011.11.051] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/20/2011] [Revised: 11/01/2011] [Accepted: 11/23/2011] [Indexed: 12/14/2022]
40
Vogt M, Bajorath J. Chemoinformatics: A view of the field and current trends in method development. Bioorg Med Chem 2012;20:5317-23. [DOI: 10.1016/j.bmc.2012.03.030] [Citation(s) in RCA: 40] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/23/2012] [Revised: 03/09/2012] [Accepted: 03/12/2012] [Indexed: 12/18/2022]
41
Yongye AB, Medina-Franco JL. Data mining of protein-binding profiling data identifies structural modifications that distinguish selective and promiscuous compounds. J Chem Inf Model 2012;52:2454-61. [PMID: 22856455 DOI: 10.1021/ci3002606] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
42
Activity landscape modeling of PPAR ligands with dual-activity difference maps. Bioorg Med Chem 2012;20:3523-32. [DOI: 10.1016/j.bmc.2012.04.005] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/15/2012] [Revised: 03/27/2012] [Accepted: 04/04/2012] [Indexed: 01/19/2023]
43
López-Vallejo F, Martínez-Mayorga K. Furin inhibitors: importance of the positive formal charge and beyond. Bioorg Med Chem 2012;20:4462-71. [PMID: 22682919 DOI: 10.1016/j.bmc.2012.05.029] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/10/2012] [Revised: 05/03/2012] [Accepted: 05/12/2012] [Indexed: 02/02/2023]
44
Gupta-Ostermann D, Hu Y, Bajorath J. Introducing the LASSO Graph for Compound Data Set Representation and Structure–Activity Relationship Analysis. J Med Chem 2012;55:5546-53. [DOI: 10.1021/jm3004762] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
45
A large scale classification of molecular fingerprints for the chemical space representation and SAR analysis. J Cheminform 2012. [PMCID: PMC3341238 DOI: 10.1186/1758-2946-4-s1-p26] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]  Open
46
Guha R. Exploring Structure-Activity Data Using the Landscape Paradigm. WILEY INTERDISCIPLINARY REVIEWS-COMPUTATIONAL MOLECULAR SCIENCE 2012;2. [PMID: 24163705 DOI: 10.1002/wcms.1087] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
47
López-Vallejo F, Giulianotti MA, Houghten RA, Medina-Franco JL. Expanding the medicinally relevant chemical space with compound libraries. Drug Discov Today 2012;17:718-26. [PMID: 22515962 DOI: 10.1016/j.drudis.2012.04.001] [Citation(s) in RCA: 90] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2012] [Revised: 03/01/2012] [Accepted: 04/02/2012] [Indexed: 02/04/2023]
48
Bajorath J. Modeling of activity landscapes for drug discovery. Expert Opin Drug Discov 2012;7:463-73. [DOI: 10.1517/17460441.2012.679616] [Citation(s) in RCA: 43] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
49
Identification of benzoylisoquinolines as potential anti-Chagas agents. Bioorg Med Chem 2012;20:2587-94. [DOI: 10.1016/j.bmc.2012.02.046] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2011] [Revised: 02/14/2012] [Accepted: 02/20/2012] [Indexed: 12/15/2022]
50
Stumpfe D, Bajorath J. Exploring Activity Cliffs in Medicinal Chemistry. J Med Chem 2012;55:2932-42. [DOI: 10.1021/jm201706b] [Citation(s) in RCA: 250] [Impact Index Per Article: 20.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
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