Microbially mediated mineral carbonation: roles of phototrophy and heterotrophy

Bio-accelerated weathering of ultramafic minerals with Gluconobacter oxydans

Ultramafic rocks are an abundant source of cations for CO2 mineralization (e.g., Mg) and elements for sustainability technologies (e.g., Ni, Cr, Mn, Co, Al). However, there is no industrially useful process for dissolving ultramafic materials to release cations for CO2 sequestration or mining them for energy-critical elements. Weathering of ultramafic rocks by rainwater, release of metal cations, and subsequent CO2 mineralization already naturally sequesters CO2 from the atmosphere, but this natural process will take thousands to hundreds of thousands of years to remove excess anthropogenic CO2, far too late to deal with global warming that will happen over the next century. Mechanical acceleration of weathering by grinding can accelerate cation release but is prohibitively expensive. In this article we show that gluconic acid-based lixiviants produced by the mineral-dissolving microbe Gluconobacter oxydans accelerate leaching of Mg2+ by 20× over deionized water, and that leaching of Mg, Mn, Fe, Co, and Ni further improves by 73% from 24 to 96 h. At low pulp density (1%) the G. oxydans biolixiviant is only 6% more effective than gluconic acid. But, at 60% pulp density the G. oxydans biolixiviant is 3.2× more effective than just gluconic acid. We demonstrate that biolixiviants made with cellulosic hydrolysate are not significantly worse than biolixiviants made with glucose, dramatically improving the feedstock available for bioleaching. Finally, we demonstrate that we can reduce the number of carbon atoms in the biolixiviant feedstock (e.g., glucose or cellulosic hydrolysate) needed to release one Mg2+ ion and mineralize one atom of carbon from CO2 from 525 to 1.

Weathering and cementation of historic kimberlite residues from South Africa: Implications for residue stabilization and CO2 sequestration

Enhanced weathering and carbon dioxide (CO2) mineralization of ultramafic mine wastes, including kimberlite residues from diamond mining, provides secure storage of this greenhouse gas and may physically stabilize mine impoundments. Yet, the outcomes of these processes over extensive periods (i.e., decades) remain relatively unknown. This study examined coarse residues from historic impoundments at the Cullinan and Voorspoed diamond mines in South Africa that have weathered over 50 to more than 100 years to investigate weathering and cementation pathways. Cemented residues (n = 7) were mainly composed of lizardite (9.6-43.2 wt.%), saponite (10.2-34.7 wt.%), and augite (6.6-27.8 wt.%), and had minor abundances of calcite (1.7-8.8 wt.%). Electron microscopy and Raman spectroscopy revealed that three plausible pathways contributed to cementing residues: (1) secondary clay precipitation, (2) carbonate precipitation and recycling, and (3) particle entrainment and infilling. Quantitative mineralogical analyses of the cement (<63 μm) and clast (>63 μm) fractions showed that the abundances of most minerals were similar between fractions, indicating that infilling of pore spaces with fine-grained particles contributed substantially to residue cementation. Stable and radiogenic carbon isotope (13C, 14C) analyses of carbonates indicated limited incorporation of organic matter and atmospheric CO2, an indication of surface weathering. Residue cementation led to some strength development (unconfined compressive strengths = 0.1-0.2 MPa), demonstrating the potential for mineral weathering to stabilize mine residues without chemical additives. Modifying residue management practices during the operational, closure, and reclamation phases at Cullinan, Voorspoed, and other mines, such as through residue co-disposal or implementing enhanced weathering practices, may improve residue stabilization and CO2 sequestration..

Mineral-mediated stability of organic carbon in soil and relevant interaction mechanisms

Soil, the largest terrestrial carbon reservoir, is central to climate change and relevant feedback to environmental health. Minerals are the essential components that contribute to over 60% of soil carbon storage. However, how the interactions between minerals and organic carbon shape the carbon transformation and stability remains poorly understood. Herein, we critically review the primary interactions between organic carbon and soil minerals and the relevant mechanisms, including sorption, redox reaction, co-precipitation, dissolution, polymerization, and catalytic reaction. These interactions, highly complex with the combination of multiple processes, greatly affect the stability of organic carbon through the following processes: (1) formation or deconstruction of the mineral-organic carbon association; (2) oxidative transformation of the organic carbon with minerals; (3) catalytic polymerization of organic carbon with minerals; and (4) varying association stability of organic carbon according to the mineral transformation. Several pieces of evidence related to the carbon turnover and stability during the interaction with soil minerals in the real eco-environment are then demonstrated. We also highlight the current research gaps and outline research priorities, which may map future directions for a deeper mechanisms-based understanding of the soil carbon storage capacity considering its interactions with minerals.

The Mining Industry's Role in Enhanced Weathering and Mineralization for CO2 Removal

Enhanced weathering and mineralization (EWM) aim to remove carbon dioxide (CO2) from the atmosphere by accelerating the reaction of this greenhouse gas with alkaline minerals. This suite of geochemical negative emissions technologies has the potential to achieve CO2 removal rates of >1 gigatonne per year, yet will require gigatonnes of suitable rock. As a supplier of rock powder, the mining industry will be at the epicenter of the global implementation of EWM. Certain alkaline mine wastes sequester CO2 under conventional mining conditions, which should be quantified across the industry. Furthermore, mines are ideal locations for testing acceleration strategies since tailings impoundments are contained and highly monitored. While some environmentally benign mine wastes may be repurposed for off-site use─reducing costs and risks associated with their storage─numerous new mines will be needed to supply rock powders to reach the gigatonne scale. Large-scale EWM pilots with mining companies are required to progress technology readiness, including carbon verification approaches. With its knowledge of geological formations and ore processing, the mining industry can play an essential role in extracting the most reactive rocks with the greatest CO2 removal capacities, creating supply chains, and participating in life-cycle assessments. The motivations for mining companies to develop EWM include reputational benefits and carbon offsets needed to achieve carbon neutrality.

Accelerated mineral bio-carbonation of coarse residue kimberlite material by inoculation with photosynthetic microbial mats

Microbiological weathering of coarse residue deposit (CRD) kimberlite produced by the Venetia Diamond Mine, Limpopo, South Africa enhanced mineral carbonation relative to untreated material. Cultures of photosynthetically enriched biofilm produced maximal carbonation conditions when mixed with kimberlite and incubated under near surface conditions. Interestingly, mineral carbonation also occurred in the dark, under water-saturated conditions. The examination of mineralized biofilms in ca. 150 µm-thick-sections using light microscopy, X-ray fluorescence microscopy (XFM) and backscatter electron-scanning electron microscopy-energy dispersive x-ray spectrometry demonstrated that microbiological weathering aided in producing secondary calcium/magnesium carbonates on silicate grain boundaries. Calcium/magnesium sulphate(s) precipitated under vadose conditions demonstrating that evaporites formed upon drying. In this system, mineral carbonation was only observed in regions possessing bacteria, preserved within carbonate as cemented microcolonies. 16S rDNA molecular diversity of bacteria in kimberlite and in natural biofilms growing on kimberlite were dominated by Proteobacteria that are active in nitrogen, phosphorus and sulphur cycling. Cyanobacteria based enrichment cultures provided with nitrogen & phosphorus (nutrients) to enhance growth, possessed increased diversity of bacteria, with Proteobacteria re-establishing themselves as the dominant bacterial lineage when incubated under dark, vadose conditions consistent with natural kimberlite. Overall, 16S rDNA analyses revealed that weathered kimberlite hosts a diverse microbiome consistent with soils, metal cycling and hydrocarbon degradation. Enhanced weathering and carbonate-cemented microcolonies demonstrate that microorganisms are key to mineral carbonation of kimberlite.

Enhanced precipitation of magnesium carbonates using carbonic anhydrase

Carbonate precipitation, as part of the carbon dioxide (CO₂) mineralization process, is generally regarded as a high-temperature, high-pressure, and high-purity CO₂ process. Typical conditions consist of temperatures around 120 °C and a pressure of 100 bar of pure CO₂, making the process costly. A major challenge facing carbonate precipitation is performing the reaction at low temperatures and low partial pressures of CO₂ (p_CO2) such as 25 °C and CO₂ flue gas concentration. In this work, we investigated the effect of carbonic anhydrase (CA) to favor magnesium (Mg) carbonate precipitation at low temperatures and low p_CO2. CA is an enzyme that accelerates CO₂ hydration promoting its conversion into HCO₃^- and then CO₃^2-. This increases supersaturation with respect to Mg-carbonates. A geochemical model was implemented and used to identify supersaturated conditions with respect to Mg-carbonates. Tests were run at 25, 40, and 50 °C and at 1 bar of either pure CO₂ or 10 vol% CO₂ and 90 vol% N₂. The concentration of 10 vol% CO₂ was chosen to resemble CO₂ concentration in flue gas. In selected tests, the CA enzyme was added directly as bovine CA or through microalgae (Scenedesmus obliquus). Experiments were run for 48 hours; 24 hours to reach equilibrium, then another 24 hours until the supersaturated conditions were established. After 48 hours the experiments were interrupted and the solids were characterized. Results show that the addition of CA, either directly or through Scenedesmus obliquus, enhances Mg-carbonate precipitation. Regardless of the temperature, the precipitates were made entirely of nesquehonite (MgCO₃-3H₂O) when pure CO₂ was used. Otherwise, a solid solution containing brucite (Mg(OH)₂) and MgCO₃-3H₂O was formed. Overall, these findings suggest that CA can promote carbonate precipitation at low temperatures, pressures, and CO₂ purity. The enzyme is effective when added directly or supplied through microalgae, opening up the possibility for a CO₂ mineralization process to be implemented directly at a combustion plant as a CO₂ storage option without preliminary CO₂ capture.

Practical and Thermodynamic Constraints on Electromicrobially-Accelerated CO2 Mineralization

By the end of the century, tens of gigatonnes of CO₂ will need to be removed from the atmosphere every year to maintain global temperatures. Natural weathering of ultramafic rocks and subsequent mineralization reactions can convert CO₂ into ultra-stable carbonates. Although this will draw down all excess CO₂, it will take thousands of years. CO₂ mineralization could be accelerated by weathering ultramafic rocks with biodegradable lixiviants. We show that if these lixiviants come from cellulosic biomass, this demand could monopolize the world’s biomass supply. We demonstrate that electromicrobial production technologies (EMP) that combine renewable electricity and microbial metabolism could produce lixiviants for as little as $200 to $400 per tonne at solar electricity prices achievable within the decade. We demonstrate that EMP could make enough lixiviants to sequester a tonne of CO₂ for less than $100. This work highlights the potential of this approach and the need for extensive R&D.

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Bio-production of acids to sequester 20 GtCO₂ yr⁻¹ could monopolize global agriculture

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Electromicrobial production could produce acids for as little as $200 to $400 per tonne

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Electromicrobial production could make acids to sequester 1 tonne CO₂ for under $100

Kinetics and mechanisms of cyanobacterially induced precipitation of magnesium silicate

The biomineralization of CO₂ , in the form of carbonate minerals, is considered as one of the efficient solutions of atmospheric CO₂ removal, allowing stable and sustainable storage of this greenhouse gas. Cyanobacteria are among the most powerful microorganisms capable of precipitating carbonate minerals, both in the present and in the past. In the modern environments, high Si concentration during geoengineering biomineralization could occur due to dissolution of Mg-bearing primary silicates such as olivine. However, most of experimental studies aimed to understand the formation of these carbonates were performed in Si-poor solutions. Thus, experimental characterizations of the nature, rate, and stoichiometry of precipitated minerals in Si-rich solutions in the presence of bacteria are lacking. The present study attempted to reproduce, in controlled laboratory experiments, the processes of biomineralization in a carbonate- and Mg-bearing medium having high Si concentrations (2-4 mM, which is below the saturation with respect to amorphous silica). These experiments have been carried out in the presence of three contrasting cyanobacteria: Synechococcus sp., Chroococcidiopsis sp. and Aphanothece clathrata in order to characterize the rate of formation, stoichiometry and mineralogical nature of precipitates. The results demonstrated significant role of cyanobacteria in the precipitation of carbonate and silicate minerals by increasing the pH of the medium during photosynthesis. Magnesium precipitation rates measured between 50 and 150 h of reaction time ranged from 0.05 to 0.5 mmol h^-1 g_dry¹ and decreased (Synechococcus sp. and Chroococcidiopsis sp.) or increased (A. clathrata) with an increase in the Si:Mg ratio in solution. The abiotic instantaneous rates of Mg and Si removal from alkaline solutions were similar to those in the presence of cyanobacteria at the same pH value suggesting that photosynthetically induced pH rise was the main factor of mineral formation. The transmission electron microscopy (TEM) and spectroscopic observations and associated analyses identified an amorphous magnesium silicate together with hydrous Mg carbonates (hydromagnesite). The formation of carbonate solid phase at high Mg: Si ratios indicated the potential for the removal of inorganic carbon at pH > 10. The difference in the degree of C removal between different species was primarily linked to different degree of pH rise during photosynthesis. Taken together, the results obtained in this study allowed an efficient reproduction of combined magnesium hydroxo-carbonates and hydrous silicates precipitation under cyanobacterial activity, suitable for geoengineering of biologically controlled CO₂ sequestration in Si-Mg-carbonate-bearing solutions.

Carbonation, Cementation, and Stabilization of Ultramafic Mine Tailings

Tailings dam failures can cause devastation to the environment, loss of human life, and require expensive remediation. A promising approach for de-risking brucite-bearing ultramafic tailings is in situ cementation via carbon dioxide (CO₂) mineralization, which also sequesters this greenhouse gas within carbonate minerals. In cylindrical test experiments, brucite [Mg(OH)₂] carbonation was accelerated by coupling organic and inorganic carbon cycling. Waste organics generated CO₂ concentrations similar to that of flue gas (up to 19%). The abundance of brucite (2-10 wt %) had the greatest influence on tailings cementation as evidenced by the increase in total inorganic carbon (TIC; +0.17-0.84%). Brucite consumption ranged from 64-84% of its initial abundance and was mainly influenced by water availability. Higher moisture contents (e.g., 80% saturation) and finer grain sizes (e.g., clay-silt) that allowed for a better distribution of water resulted in greater brucite carbonation. Furthermore, pore clogging and surface passivation by Mg-carbonates may have slowed brucite carbonation over the 10 weeks. Unconfined compressive strengths ranged from 0.4-6.9 MPa and would be sufficient in most scenarios to adequately stabilize tailings. Our study demonstrates the potential for stabilizing brucite-bearing mine tailings through in situ cementation while sequestering CO₂.

Algal softening followed by ozonation: The fate of persistent micropollutants and natural organic matter in groundwater

A proof-of-concept study evaluates the performance of a novel strategy using photosynthetic microorganisms to soften groundwater instead of using caustic chemicals. The microalga Scenedesmus quadricauda was used to increase the pH of the groundwater via natural photosynthesis. This work applied softening as a pretreatment to ozonation of hard groundwater and mainly focused on investigating the multiple effects of algal softening on the degradation of persistent micropollutants upon subsequent ozonation. The algae-induced alkaline conditions (pH > 10) were favorable to catalyze the formation of OH radicals directly from O₃ molecules. Moreover, algal softening removed the strong radical-scavenging carbonate species (HCO₃^- and CO₃^2-) to a much greater extent than that achieved by chemical softening, which was attributed to the combination of mineral carbonation and metabolic CO₂ reduction. The fate of the natural organic matter (NOM) was characterized with spectroscopy, chromatography, and bioassay, which indicates that algal treatment decomposed the NOM to be less susceptible to attack by OH radicals. Consequently, the ozonation of alkaline groundwater achieved a better removal of the micropollutant residues in groundwater. Carbamazepine and diclofenac were used as model chemicals of persistent groundwater contaminants and were almost completely removed with an addition of 1.25 mg O₃ L^-1 (0.63 mg-O₃ mg-C^-1).

Mechanism of carbonate mineralization induced by microbes: Taking Curvibacter lanceolatus strain HJ-1 as an example

Microbial-induced carbonate precipitation is important in the global carbon cycle, especially in fixing atmospheric CO₂. Many simulation experiments have shown that microbes can induce carbonate precipitation, although there is no established understanding of the mechanism. In this study, several mineralization experiments were performed using Curvibacter lanceolatus strain HJ-1, including its secreted extracellular polymeric substances (EPS) and carbonic anhydrase (CA). We found that strain HJ-1, EPS, and CA could promote carbonate precipitation if compared with the respective control experiments (CK). Also, both HJ-1 and EPS1 experiments contained calcite and aragonite, whereas CA experiments formed calcite only. Therefore, HJ-1 and EPS is favorable for carbonate precipitation, especially for aragonite. Besides, the formation of calcite in the EPS2 experiments indicated that EPS contains a trace amount of CA, which might promote CO₂ hydration and eventually lead to carbonate precipitation. It was suggested that CA only provide CO₃^2- for the formation of carbonate minerals. In the absence of exogenous HCO₃-, the optimized calcification rate followed the order: HJ-1(49.5 %) > CA(6.6 %) > EPS2(4.1 %). In addition, MICP mechanisms was studied, an increase in pH and CO₂ hydration by CA play synergetic roles in providing supersaturated alkaline conditions in the system with bacteria. Finally, bacterial cells and EPS promote the formation of calcite and aragonite by acting as nucleation sites.

Core microbial communities of lacustrine microbialites sampled along an alkalinity gradient

Microbialites are usually carbonate-rich sedimentary rocks formed by the interplay of phylogenetically and metabolically complex microbial communities with their physicochemical environment. Yet, the biotic and abiotic determinants of microbialite formation remain poorly constrained. Here, we analysed the structure of prokaryotic and eukaryotic communities associated with microbialites occurring in several crater lakes of the Trans-Mexican volcanic belt along an alkalinity gradient. Microbialite size and community structure correlated with lake physicochemical parameters, notably alkalinity. Although microbial community composition varied across lake microbialites, major taxa-associated functions appeared quite stable with both, oxygenic and anoxygenic photosynthesis and, to less extent, sulphate reduction, as major putative carbonatogenic processes. Despite interlake microbialite community differences, we identified a microbial core of 247 operational taxonomic units conserved across lake microbialites, suggesting a prominent ecological role in microbialite formation. This core mostly encompassed Cyanobacteria and their typical associated taxa (Bacteroidetes, Planctomycetes) and diverse anoxygenic photosynthetic bacteria, notably Chloroflexi, Alphaproteobacteria (Rhodobacteriales, Rhodospirilalles), Gammaproteobacteria (Chromatiaceae) and minor proportions of Chlorobi. The conserved core represented up to 40% (relative abundance) of the total community in lakes Alchichica and Atexcac, displaying the highest alkalinities and the most conspicuous microbialites. Core microbialite communities associated with carbonatogenesis might be relevant for inorganic carbon sequestration purposes.

In-Depth Profiling of Calcite Precipitation by Environmental Bacteria Reveals Fundamental Mechanistic Differences with Relevance to Application

Biomineralization triggered by bacteria is important in the natural environment and has many applications in industry and in civil and geotechnical engineering. The diversity in biomineralization capabilities of environmental bacteria is, however, not well understood. This study surveyed environmental bacteria for their ability to precipitate calcium carbonate minerals and investigated both the mechanisms and the resulting crystals. We show that while urease activity leads to the fastest precipitation, it is by no means essential. Importantly, the same quantities of calcium carbonate are produced by nonureolytic bacteria, and the resulting crystals appear to have larger volumes and more organic components, which are likely beneficial in specific applications. Testing both precipitation mechanisms in a self-healing concrete application showed that nonureolytic bacteria delivered more robust results. Here, we performed a systematic study of the fundamental differences in biomineralization between environmental bacteria, and we provide important information for the design of bacterially based engineering solutions.

Microbially induced calcite precipitation (MICP) has not only helped to shape our planet’s geological features but is also a promising technology to address environmental concerns in civil engineering applications. However, limited understanding of the biomineralization capacity of environmental bacteria impedes application. We therefore surveyed the environment for different mechanisms of precipitation across bacteria. The most fundamental difference was in ureolytic ability, where urease-positive bacteria caused rapid, widespread increases in pH, whereas nonureolytic strains produced such changes slowly and locally. These pH shifts correlated well with patterns of precipitation on solid medium. Strikingly, while both mechanisms led to high levels of precipitation, we observed clear differences in the precipitate. Ureolytic bacteria produced homogenous, inorganic fine crystals, whereas the crystals of nonureolytic strains were larger and had a mixed organic/inorganic composition. When representative strains were tested in application for crack healing in cement mortars, nonureolytic bacteria gave robust results, while ureolytic strains showed more variation. This may be explained by our observation that urease activity differed between growth conditions or by the different natures and therefore different material performances of the precipitates. Our results shed light on the breadth of biomineralization activity among environmental bacteria, an important step toward the rational design of bacterially based engineering solutions.

IMPORTANCE Biomineralization triggered by bacteria is important in the natural environment and has many applications in industry and in civil and geotechnical engineering. The diversity in biomineralization capabilities of environmental bacteria is, however, not well understood. This study surveyed environmental bacteria for their ability to precipitate calcium carbonate minerals and investigated both the mechanisms and the resulting crystals. We show that while urease activity leads to the fastest precipitation, it is by no means essential. Importantly, the same quantities of calcium carbonate are produced by nonureolytic bacteria, and the resulting crystals appear to have larger volumes and more organic components, which are likely beneficial in specific applications. Testing both precipitation mechanisms in a self-healing concrete application showed that nonureolytic bacteria delivered more robust results. Here, we performed a systematic study of the fundamental differences in biomineralization between environmental bacteria, and we provide important information for the design of bacterially based engineering solutions.

Deciphering Biosignatures in Planetary Contexts

Microbial life permeates Earth's critical zone and has likely inhabited nearly all our planet's surface and near subsurface since before the beginning of the sedimentary rock record. Given the vast time that Earth has been teeming with life, do astrobiologists truly understand what geological features untouched by biological processes would look like? In the search for extraterrestrial life in the Universe, it is critical to determine what constitutes a biosignature across multiple scales, and how this compares with "abiosignatures" formed by nonliving processes. Developing standards for abiotic and biotic characteristics would provide quantitative metrics for comparison across different data types and observational time frames. The evidence for life detection falls into three categories of biosignatures: (1) substances, such as elemental abundances, isotopes, molecules, allotropes, enantiomers, minerals, and their associated properties; (2) objects that are physical features such as mats, fossils including trace-fossils and microbialites (stromatolites), and concretions; and (3) patterns, such as physical three-dimensional or conceptual n-dimensional relationships of physical or chemical phenomena, including patterns of intermolecular abundances of organic homologues, and patterns of stable isotopic abundances between and within compounds. Five key challenges that warrant future exploration by the astrobiology community include the following: (1) examining phenomena at the "right" spatial scales because biosignatures may elude us if not examined with the appropriate instrumentation or modeling approach at that specific scale; (2) identifying the precise context across multiple spatial and temporal scales to understand how tangible biosignatures may or may not be preserved; (3) increasing capability to mine big data sets to reveal relationships, for example, how Earth's mineral diversity may have evolved in conjunction with life; (4) leveraging cyberinfrastructure for data management of biosignature types, characteristics, and classifications; and (5) using three-dimensional to n-D representations of biotic and abiotic models overlain on multiple overlapping spatial and temporal relationships to provide new insights.

The kinetics of siderophore-mediated olivine dissolution

Silicate minerals represent an important reservoir of nutrients at Earth's surface and a source of alkalinity that modulates long-term geochemical cycles. Due to the slow kinetics of primary silicate mineral dissolution and the potential for nutrient immobilization by secondary mineral precipitation, the bioavailability of many silicate-bound nutrients may be limited by the ability of micro-organisms to actively scavenge these nutrients via redox alteration and/or organic ligand production. In this study, we use targeted laboratory experiments with olivine and the siderophore deferoxamine B to explore how microbial ligands affect nutrient (Fe) release and the overall rate of mineral dissolution. Our results show that olivine dissolution rates are accelerated in the presence of micromolar concentrations of deferoxamine B. Based on the non-linear decrease in rates with time and formation of a Fe³⁺ -ligand complex, we attribute this acceleration in dissolution rates to the removal of an oxidized surface coating that forms during the dissolution of olivine at circum-neutral pH in the presence of O₂ and the absence of organic ligands. While increases in dissolution rates are observed with micromolar concentrations of siderophores, it remains unclear whether such conditions could be realized in natural environments due to the strong physiological control on microbial siderophore production. So, to contextualize our experimental results, we also developed a feedback model, which considers how microbial physiology and ligand-promoted mineral dissolution kinetics interact to control the extent of biotic enhancement of dissolution rates expected for different environments. The model predicts that physiological feedbacks severely limit the extent to which dissolution rates may be enhanced by microbial activity, though the rate of physical transport modulates this limitation.

Carbon Sequestration in Biogenic Magnesite and Other Magnesium Carbonate Minerals

The stability and longevity of carbonate minerals make them an ideal sink for surplus atmospheric carbon dioxide. Biogenic magnesium carbonate mineral precipitation from the magnesium-rich tailings generated by many mining operations could offset net mining greenhouse gas emissions, while simultaneously giving value to mine waste products. In this investigation, cyanobacteria in a wetland bioreactor enabled the precipitation of magnesite (MgCO₃), hydromagnesite [Mg₅(CO₃)₄(OH)₂·4H₂O], and dypingite [Mg₅(CO₃)₄(OH)₂·5H₂O] from a synthetic wastewater comparable in chemistry to what is produced by acid leaching of ultramafic mine tailings. These precipitates occurred as micrometer-scale mineral grains and microcrystalline carbonate coatings that entombed filamentous cyanobacteria. This provides the first laboratory demonstration of low temperature, biogenic magnesite precipitation for carbon sequestration purposes. These findings demonstrate the importance of extracellular polymeric substances in microbially enabled carbonate mineral nucleation. Fluid composition was monitored to determine carbon sequestration rates. The results demonstrate that up to 238 t of CO₂ could be stored per hectare of wetland/year if this method of carbon dioxide sequestration was implemented at an ultramafic mine tailing storage facility. The abundance of tailings available for carbonation and the anticipated global implementation of carbon pricing make this method of mineral carbonation worth further investigation.

Bisnorgammacerane traces predatory pressure and the persistent rise of algal ecosystems after Snowball Earth

Eukaryotic algae rose to ecological relevance after the Neoproterozoic Snowball Earth glaciations, but the causes for this consequential evolutionary transition remain enigmatic. Cap carbonates were globally deposited directly after these glaciations, but they are usually organic barren or thermally overprinted. Here we show that uniquely-preserved cap dolostones of the Araras Group contain exceptional abundances of a newly identified biomarker: 25,28-bisnorgammacerane. Its secular occurrence, carbon isotope systematics and co-occurrence with other demethylated terpenoids suggest a mechanistic connection to extensive microbial degradation of ciliate-derived biomass in bacterially dominated ecosystems. Declining 25,28-bisnorgammacerane concentrations, and a parallel rise of steranes over hopanes, indicate the transition from a bacterial to eukaryotic dominated ecosystem after the Marinoan deglaciation. Nutrient levels already increased during the Cryogenian and were a prerequisite, but not the ultimate driver for the algal rise. Intense predatory pressure by bacterivorous protists may have irrevocably cleared self-sustaining cyanobacterial ecosystems, thereby creating the ecological opportunity that allowed for the persistent rise of eukaryotic algae to global importance.

The growth of Scenedesmus quadricauda in RO concentrate and the impacts on refractory organic matter, Escherichia coli, and trace organic compounds

This study achieves a better operational simplicity for the phycoremediation of reverse osmosis (RO) concentrate using Scenedesmus quadricauda microalgae. Under continuous illumination with CO₂ supplementation, algal growth in the RO concentrate resulted in a conversion of polymeric organic matter (a mixture of humic substances and polysaccharides) to biodegradable fractions and their prompt removal along with inorganic nutrients (NO₃^- and PO₄^3-). The algal-induced degradation of humic-like substances which are typically refractory to microbial decomposition was demonstrated in an indirect manner. In this study, we also investigated the effects of algal treatment on the growth of Escherichia coli and removal of trace organic compounds (TOrCs) from the RO concentrate. Our results indicate that algal treatment of the RO concentrate using aeration with 10% (v/v) CO₂ under continuous illumination is highly feasible as a safe and inexpensive technology to remove non- or slowly-biodegradable organic matter, reduce enteric bacteria, and attenuate TOrCs in wastewater. However, the results should not be generalized, but critically discussed, due to limitations of using the synthetic RO concentrate in evaluating the performance of wastewater remediation with microalgae.

Accelerating Mineral Carbonation Using Carbonic Anhydrase

Carbonic anhydrase (CA) enzymes have gained considerable attention for their potential use in carbon dioxide (CO2) capture technologies because they are able to catalyze rapidly the interconversion of aqueous CO2 and bicarbonate. However, there are challenges for widespread implementation including the need to develop mineralization process routes for permanent carbon storage. Mineral carbonation of highly reactive feedstocks may be limited by the supply rate of CO2. This rate limitation can be directly addressed by incorporating enzyme-catalyzed CO2 hydration. This study examined the effects of bovine carbonic anhydrase (BCA) and CO2-rich gas streams on the carbonation rate of brucite [Mg(OH)2], a highly reactive mineral. Alkaline brucite slurries were amended with BCA and supplied with 10% CO2 gas while aqueous chemistry and solids were monitored throughout the experiments (hours to days). In comparison to controls, brucite carbonation using BCA was accelerated by up to 240%. Nesquehonite [MgCO3·3H2O] precipitation limited the accumulation of hydrated CO2 species, apparently preventing BCA from catalyzing the dehydration reaction. Geochemical models reproduce observed reaction progress in all experiments, revealing a linear correlation between CO2 uptake and carbonation rate. Data demonstrates that carbonation in BCA-amended reactors remained limited by CO2 supply, implying further acceleration is possible.

Microbially Accelerated Carbonate Mineral Precipitation as a Strategy for in Situ Carbon Sequestration and Rehabilitation of Asbestos Mine Sites

A microbially accelerated process for the precipitation of carbonate minerals was implemented in a sample of serpentinite mine tailings collected from the abandoned Woodsreef Asbestos Mine in New South Wales, Australia as a strategy to sequester atmospheric CO2 while also stabilizing the tailings. Tailings were leached using sulfuric acid in reaction columns and subsequently inoculated with an alkalinity-generating cyanobacteria-dominated microbial consortium that was enriched from pit waters at the Woodsreef Mine. Leaching conditions that dissolved 14% of the magnesium from the serpentinite tailings while maintaining circumneutral pH (1800 ppm, pH 6.3) were employed in the experiment. The mineralogy, water chemistry, and microbial colonization of the columns were characterized following the experiment. Micro-X-ray diffraction was used to identify carbonate precipitates as dypingite [Mg5(CO3)4(OH)2·5H2O] and hydromagnesite [Mg5(CO3)4(OH)2·4H2O] with minor nesquehonite (MgCO3·3H2O). Scanning electron microscopy revealed that carbonate mineral precipitates form directly on the filamentous cyanobacteria. These findings demonstrate the ability of these organisms to generate localized supersaturating microenvironments of high concentrations of adsorbed magnesium and photosynthetically generated carbonate ions while also acting as nucleation sites for carbonate precipitation. This study is the first step toward implementing in situ carbon sequestration in serpentinite mine tailings via microbial carbonate precipitation reactions.

Carbonate Precipitation through Microbial Activities in Natural Environment, and Their Potential in Biotechnology: A Review

Calcium carbonate represents a large portion of carbon reservoir and is used commercially for a variety of applications. Microbial carbonate precipitation, a by-product of microbial activities, plays an important metal coprecipitation and cementation role in natural systems. This natural process occurring in various geological settings can be mimicked and used for a number of biotechnologies, such as metal remediation, carbon sequestration, enhanced oil recovery, and construction restoration. In this study, different metabolic activities leading to calcium carbonate precipitation, their native environment, and potential applications and challenges are reviewed.

Metagenomic analysis reveals that modern microbialites and polar microbial mats have similar taxonomic and functional potential

Within the subarctic climate of Clinton Creek, Yukon, Canada, lies an abandoned and flooded open-pit asbestos mine that harbors rapidly growing microbialites. To understand their formation we completed a metagenomic community profile of the microbialites and their surrounding sediments. Assembled metagenomic data revealed that bacteria within the phylum Proteobacteria numerically dominated this system, although the relative abundances of taxa within the phylum varied among environments. Bacteria belonging to Alphaproteobacteria and Gammaproteobacteria were dominant in the microbialites and sediments, respectively. The microbialites were also home to many other groups associated with microbialite formation including filamentous cyanobacteria and dissimilatory sulfate-reducing Deltaproteobacteria, consistent with the idea of a shared global microbialite microbiome. Other members were present that are typically not associated with microbialites including Gemmatimonadetes and iron-oxidizing Betaproteobacteria, which participate in carbon metabolism and iron cycling. Compared to the sediments, the microbialite microbiome has significantly more genes associated with photosynthetic processes (e.g., photosystem II reaction centers, carotenoid, and chlorophyll biosynthesis) and carbon fixation (e.g., CO dehydrogenase). The Clinton Creek microbialite communities had strikingly similar functional potentials to non-lithifying microbial mats from the Canadian High Arctic and Antarctica, but are functionally distinct, from non-lithifying mats or biofilms from Yellowstone. Clinton Creek microbialites also share metabolic genes (R² < 0.750) with freshwater microbial mats from Cuatro Ciénegas, Mexico, but are more similar to polar Arctic mats (R² > 0.900). These metagenomic profiles from an anthropogenic microbialite-forming ecosystem provide context to microbialite formation on a human-relevant timescale.

A greenhouse-scale photosynthetic microbial bioreactor for carbon sequestration in magnesium carbonate minerals

A cyanobacteria dominated consortium collected from an alkaline wetland located near Atlin, British Columbia, Canada accelerated the precipitation of platy hydromagnesite [Mg5(CO3)4(OH)2·4H2O] in a linear flow-through experimental model wetland. The concentration of magnesium decreased rapidly within 2 m of the inflow point of the 10-m-long (∼1.5 m(2)) bioreactor. The change in water chemistry was monitored over two months along the length of the channel. Carbonate mineralization was associated with extra-cellular polymeric substances in the nutrient-rich upstream portion of the bioreactor, while the lower part of the system, which lacked essential nutrients, did not exhibit any hydromagnesite precipitation. A mass balance calculation using the water chemistry data produced a carbon sequestration rate of 33.34 t of C/ha per year. Amendment of the nutrient deficiency would intuitively allow for increased carbonation activity. Optimization of this process will have application as a sustainable mining practice by mediating magnesium carbonate precipitation in ultramafic mine tailings storage facilities.

Reaction mechanism for the aqueous-phase mineral carbonation of heat-activated serpentine at low temperatures and pressures in flue gas conditions

Mineral carbonation is known as one of the safest ways to sequester CO2. Nevertheless, the slow kinetics and low carbonation rates constitute a major barrier for any possible industrial application. To date, no studies have focused on reacting serpentinite with a relatively low partial pressure of CO2 (pCO2) close to flue gas conditions. In this work, finely ground and heat-treated serpentinite [Mg3Si2O5(OH)4] extracted from mining residues was reacted with a 18.2 vol % CO2 gas stream at moderate global pressures to investigate the effect on CO2 solubility and Mg leaching. Serpentinite dissolution rates were also measured to define the rate-limiting step. Successive batches of gas were contacted with the same serpentinite to identify surface-limiting factors using scanning electron microscopy (SEM) analysis. Investigation of the serpentinite carbonation reaction mechanisms under conditions close to a direct flue gas treatment showed that increased dissolution rates could be achieved relative to prior work, with an average Mg dissolution rate of 3.55 × 10(-11) mol cm(-2) s(-1). This study provides another perspective of the feasibility of applying a mineral carbonation process to reduce industrial greenhouse gas (GHG) emissions from large emission sources.

Accelerated carbonation of brucite in mine tailings for carbon sequestration

Atmospheric CO(2) is sequestered within ultramafic mine tailings via carbonation of Mg-bearing minerals. The rate of carbon sequestration at some mine sites appears to be limited by the rate of CO(2) supply. If carbonation of bulk tailings were accelerated, large mines may have the capacity to sequester millions of tonnes of CO(2) annually, offsetting mine emissions. The effect of supplying elevated partial pressures of CO(2) (pCO(2)) at 1 atm total pressure, on the carbonation rate of brucite [Mg(OH)(2)], a tailings mineral, was investigated experimentally with conditions emulating those at Mount Keith Nickel Mine (MKM), Western Australia. Brucite was carbonated to form nesquehonite [MgCO(3) · 3H(2)O] at a rate that increased linearly with pCO(2). Geochemical modeling indicated that HCO(3)(-) promoted dissolution accelerated brucite carbonation. Isotopic and aqueous chemistry data indicated that equilibrium between CO(2) in the gas and aqueous phases was not attained during carbonation, yet nesquehonite precipitation occurred at equilibrium. This implies CO(2) uptake into solution remains rate-limiting for brucite carbonation at elevated pCO(2), providing potential for further acceleration. Accelerated brucite carbonation at MKM offers the potential to offset annual mine emissions by ~22-57%. Recognition of mechanisms for brucite carbonation will guide ongoing work to accelerate Mg-silicate carbonation in tailings.

Geochemical implications of gas leakage associated with geologic CO2 storage--a qualitative review

Gas leakage from deep storage reservoirs is a major risk factor associated with geologic carbon sequestration (GCS). A systematic understanding of how such leakage would impact the geochemistry of potable aquifers and the vadose zone is crucial to the maintenance of environmental quality and the widespread acceptance of GCS. This paper reviews the current literature and discusses current knowledge gaps on how elevated CO(2) levels could influence geochemical processes (e.g., adsorption/desorption and dissolution/precipitation) in potable aquifers and the vadose zone. The review revealed that despite an increase in research and evidence for both beneficial and deleterious consequences of CO(2) migration into potable aquifers and the vadose zone, significant knowledge gaps still exist. Primary among these knowledge gaps is the role/influence of pertinent geochemical factors such as redox condition, CO(2) influx rate, gas stream composition, microbial activity, and mineralogy in CO(2)-induced reactions. Although these factors by no means represent an exhaustive list of knowledge gaps we believe that addressing them is pivotal in advancing current scientific knowledge on how leakage from GCS may impact the environment, improving predictions of CO(2)-induced geochemical changes in the subsurface, and facilitating science-based decision- and policy-making on risk associated with geologic carbon sequestration.