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Koller AJ, Glaser O, DeLuca MC, Motz RN, Amason EK, Carbo-Bague I, Mixdorf JC, Guzei IA, Aluicio-Sarduy E, Śmiłowicz D, Barnhart TE, Ramogida CF, Nolan EM, Engle JW, Boros E. "Off-Label Use" of the Siderophore Enterobactin Enables Targeted Imaging of Cancer with Radioactive Ti (IV). Angew Chem Int Ed Engl 2024; 63:e202319578. [PMID: 38442302 PMCID: PMC11258920 DOI: 10.1002/anie.202319578] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/18/2023] [Revised: 02/27/2024] [Accepted: 03/04/2024] [Indexed: 03/07/2024]
Abstract
The development of inert, biocompatible chelation methods is required to harness the emerging positron emitting radionuclide 45Ti for radiopharmaceutical applications. Herein, we evaluate the Ti(IV)-coordination chemistry of four catechol-based, hexacoordinate chelators using synthetic, structural, computational, and radiochemical approaches. The siderophore enterobactin (Ent) and its synthetic mimic TREN-CAM readily form mononuclear Ti(IV) species in aqueous solution at neutral pH. Radiolabeling studies reveal that Ent and TREN-CAM form mononuclear complexes with the short-lived, positron-emitting radionuclide 45Ti(IV), and do not transchelate to plasma proteins in vitro and exhibit rapid renal clearance in naïve mice. These features guide efforts to target the 45Ti isotope to prostate cancer tissue through the design, synthesis, and evaluation of Ent-DUPA, a small molecule conjugate composed of a prostate specific membrane antigen (PSMA) targeting peptide and a monofunctionalized Ent scaffold. The [45Ti][Ti(Ent-DUPA)]2- complex forms readily at room temperature. In a tumor xenograft model in mice, selective tumor tissue accumulation (8±5 %, n=5), and low off-target uptake in other organs is observed. Overall, this work demonstrates targeted imaging with 45Ti(IV), provides a foundation for advancing the application of 45Ti in nuclear medicine, and reveals that Ent can be repurposed as a 45Ti-complexing cargo for targeted nuclear imaging applications.
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Affiliation(s)
- Angus J Koller
- Department of Chemistry, Stony Brook University, Stony Brook, New York, 11794, United States
| | - Owen Glaser
- Department of Chemistry, University of Wisconsin-Madison, 1101 University Avenue, Madison, Wisconsin, 53706, United States
| | - Molly C DeLuca
- Department of Medical Physics, University of Wisconsin-Madison, 1111 Highland Avenue, Madison, Wisconsin, 53705, United States
| | - Rachel N Motz
- Department of Chemistry, Massachusetts Institute of Technology, Cambridge, Massachusetts, 02139, United States
| | - Edith K Amason
- Department of Chemistry, University of Wisconsin-Madison, 1101 University Avenue, Madison, Wisconsin, 53706, United States
| | - Imma Carbo-Bague
- Department of Chemistry, Simon Fraser University, Burnaby, British Columbia, V5A 1S6, Canada
| | - Jason C Mixdorf
- Department of Medical Physics, University of Wisconsin-Madison, 1111 Highland Avenue, Madison, Wisconsin, 53705, United States
| | - Ilia A Guzei
- Department of Chemistry, University of Wisconsin-Madison, 1101 University Avenue, Madison, Wisconsin, 53706, United States
| | - Eduardo Aluicio-Sarduy
- Department of Medical Physics, University of Wisconsin-Madison, 1111 Highland Avenue, Madison, Wisconsin, 53705, United States
| | - Dariusz Śmiłowicz
- Department of Chemistry, University of Wisconsin-Madison, 1101 University Avenue, Madison, Wisconsin, 53706, United States
| | - Todd E Barnhart
- Department of Medical Physics, University of Wisconsin-Madison, 1111 Highland Avenue, Madison, Wisconsin, 53705, United States
| | - Caterina F Ramogida
- Department of Chemistry, Simon Fraser University, Burnaby, British Columbia, V5A 1S6, Canada
| | - Elizabeth M Nolan
- Department of Chemistry, Massachusetts Institute of Technology, Cambridge, Massachusetts, 02139, United States
| | - Jonathan W Engle
- Department of Medical Physics, University of Wisconsin-Madison, 1111 Highland Avenue, Madison, Wisconsin, 53705, United States
| | - Eszter Boros
- Department of Chemistry, University of Wisconsin-Madison, 1101 University Avenue, Madison, Wisconsin, 53706, United States
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2
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Motz RN, Guo C, Sargun A, Walker GT, Sassone-Corsi M, Raffatellu M, Nolan EM. Conjugation to Native and Nonnative Triscatecholate Siderophores Enhances Delivery and Antibacterial Activity of a β-Lactam to Gram-Negative Bacterial Pathogens. J Am Chem Soc 2024; 146:7708-7722. [PMID: 38457782 PMCID: PMC11037102 DOI: 10.1021/jacs.3c14490] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/10/2024]
Abstract
Developing new antibiotics and delivery strategies is of critical importance for treating infections caused by Gram-negative bacterial pathogens. Hijacking bacterial iron uptake machinery, such as that of the siderophore enterobactin (Ent), represents one promising approach toward these goals. Here, we report a novel Ent-inspired siderophore-antibiotic conjugate (SAC) employing an alternative siderophore moiety as the delivery vector and demonstrate the potency of our SACs harboring the β-lactam antibiotic ampicillin (Amp) against multiple pathogenic Gram-negative bacterial strains. We establish the ability of N,N',N''-(nitrilotris(ethane-2,1-diyl))tris(2,3-dihydroxybenzamide) (TRENCAM, hereafter TC), a synthetic mimic of Ent, to facilitate drug delivery across the outer membrane (OM) of Gram-negative pathogens. Conjugation of Amp to a new monofunctionalized TC scaffold affords TC-Amp, which displays markedly enhanced antibacterial activity against the gastrointestinal pathogen Salmonella enterica serovar Typhimurium (STm) compared with unmodified Amp. Bacterial uptake, antibiotic susceptibility, and microscopy studies with STm show that the TC moiety facilitates TC-Amp uptake by the OM receptors FepA and IroN and that the Amp warhead inhibits penicillin-binding proteins. Moreover, TC-Amp achieves targeted activity, selectively killing STm in the presence of a commensal lactobacillus. Remarkably, we uncover that TC-Amp and its Ent-based predecessor Ent-Amp achieve enhanced antibacterial activity against diverse Gram-negative ESKAPE pathogens that express Ent uptake machinery, including strains that possess intrinsic β-lactam resistance. TC-Amp and Ent-Amp exhibit potency comparable to that of the FDA-approved SAC cefiderocol against Gram-negative pathogens. These results demonstrate the effective application of native and appropriately designed nonnative siderophores as vectors for drug delivery across the OM of multiple Gram-negative bacterial pathogens.
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Affiliation(s)
- Rachel N. Motz
- Department of Chemistry, Massachusetts Institute of Technology, Cambridge, MA 02139, USA
| | - Chuchu Guo
- Department of Chemistry, Massachusetts Institute of Technology, Cambridge, MA 02139, USA
| | - Artur Sargun
- Department of Chemistry, Massachusetts Institute of Technology, Cambridge, MA 02139, USA
| | - Gregory T. Walker
- Division of Host-Microbe Systems and Therapeutics, Department of Pediatrics, University of California San Diego, La Jolla, CA 92093, USA
| | - Martina Sassone-Corsi
- Department of Microbiology & Molecular Genetics, University of California Irvine, Irvine, CA 92697, USA
| | - Manuela Raffatellu
- Division of Host-Microbe Systems and Therapeutics, Department of Pediatrics, University of California San Diego, La Jolla, CA 92093, USA
- Department of Microbiology & Molecular Genetics, University of California Irvine, Irvine, CA 92697, USA
- Center for Microbiome Innovation, University of California San Diego, La Jolla, CA 92093, USA
- Chiba University-UC San Diego Center for Mucosal Immunology, Allergy, and Vaccines, La Jolla, CA 92093, USA
| | - Elizabeth M. Nolan
- Department of Chemistry, Massachusetts Institute of Technology, Cambridge, MA 02139, USA
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3
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Wang X, Nayak S, Wilson RE, Soderholm L, Servis MJ. Solvent effects on extractant conformational energetics in liquid-liquid extraction: a simulation study of molecular solvents and ionic liquids. Phys Chem Chem Phys 2024; 26:2877-2886. [PMID: 38048065 DOI: 10.1039/d3cp04680j] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/05/2023]
Abstract
Extractant design in liquid-liquid extraction (LLE) is a research frontier of metal ion separations that typically focuses on the direct extractant-metal interactions. However, a more detailed understanding of energetic drivers of separations beyond primary metal coordination is often lacking, including the role of solvent in the extractant phase. In this work, we propose a new mechanism for enhancing metal-complexant energetics with nanostructured solvents. Using molecular dynamics simulations with umbrella sampling, we find that the organic solvent can reshape the energetics of the extractant's intramolecular conformational landscape. We calculate free energy profiles of different conformations of a representative bidentate extractant, n-octyl(phenyl)-N,N-diisobutyl carbamoyl methyl phosphinoxide (CMPO), in four different solvents: dodecane, tributyl phosphate (TBP), and dry and wet ionic liquid (IL) 1-ethyl-3-methylimidazolium bis(trifluoromethylsulfonyl)imide ([EMIM][Tf2N]). By promoting reorganization of the extractant molecule into its binding conformation, our findings reveal how particular solvents can ameliorate this unfavorable step of the metal separation process. In particular, the charge alternating nanodomains formed in ILs substantially reduce the free energy penalty associated with extractant reorganization. Importantly, using alchemical free energy calculations, we find that this stabilization persists even when we explicitly include the extracted cation. These findings provide insight into the energetic drivers of metal ion separations and potentially suggest a new approach to designing effective separations using a molecular-level understanding of solvent effects.
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Affiliation(s)
- Xiaoyu Wang
- Chemical Sciences and Engineering Division, Argonne National Laboratory, 9700 S Cass Ave, Lemont, IL 60439, USA.
| | - Srikanth Nayak
- Chemical Sciences and Engineering Division, Argonne National Laboratory, 9700 S Cass Ave, Lemont, IL 60439, USA.
| | - Richard E Wilson
- Chemical Sciences and Engineering Division, Argonne National Laboratory, 9700 S Cass Ave, Lemont, IL 60439, USA.
| | - L Soderholm
- Chemical Sciences and Engineering Division, Argonne National Laboratory, 9700 S Cass Ave, Lemont, IL 60439, USA.
| | - Michael J Servis
- Chemical Sciences and Engineering Division, Argonne National Laboratory, 9700 S Cass Ave, Lemont, IL 60439, USA.
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4
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Akine S, Miyashita M, Nabeshima T. Enhancement of Alkali Metal Ion Recognition by Metalation of a Tris(saloph) Cryptand Having Benzene Rings at the Bridgeheads. Inorg Chem 2021; 60:12961-12971. [PMID: 34310880 DOI: 10.1021/acs.inorgchem.1c01376] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
A cryptand derivative, H6L, which has three H2saloph arms connected by two benzene ring bridgeheads, was synthesized and converted into the trinuclear metallocryptand, LNi3. The nonmetalated host, H6L, was found to bind to alkali metal ions (Na+, K+, Rb+, Cs+; logKa = 3.37-6.67) in its well-defined cavity in DMSO/chloroform (1:9). The binding affinity was enhanced by 1-2 orders of magnitude upon the conversion into the metallocryptand, LNi3, which can be explained by the more polarized phenoxo groups in the [Ni(saloph)] arms. The guest binding affinity of Na+ < K+ < Rb+ ≈ Cs+ was clearly demonstrated by the 1H NMR competition experiments. The DFT calculations suggested that the Rb+ ion most suitably fit into the benzene-benzene spacing with a cation-π interaction and that only the largest Cs+ ion can almost equally interact with all six phenoxo oxygen donor atoms. The metallocryptand, LNi3, also showed a strong binding affinity to Ag+ by taking advantage of cation-π interactions, which was confirmed by spectroscopic titrations and crystallographic analysis as well as DFT calculations. Thus, the well-defined three-dimensional cavity of LNi3 was found to be suitable for strong binding with alkali metal ions as well as Ag+.
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Affiliation(s)
- Shigehisa Akine
- Graduate School of Natural Science and Technology/Nano Life Science Institute (WPI-NanoLSI), Kanazawa University, Kakuma-machi, Kanazawa 920-1192, Japan
| | - Masato Miyashita
- Faculty of Pure and Applied Sciences, University of Tsukuba, 1-1-1 Tennodai, Tsukuba, Ibaraki 305-8571, Japan
| | - Tatsuya Nabeshima
- Faculty of Pure and Applied Sciences, University of Tsukuba, 1-1-1 Tennodai, Tsukuba, Ibaraki 305-8571, Japan
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5
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Computational and experimental studies on the effect of conformational flexibility on bonding and photophysics of a triaza-macrocycle tripod. J INCL PHENOM MACRO 2021. [DOI: 10.1007/s10847-021-01084-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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6
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Gacesa R, Tripodi AAP, Cilibrizzi A, Leggio A, Hider R, Abbate V. Solid-Phase Synthesis and In-Silico Analysis of Iron-Binding Catecholato Chelators. Int J Mol Sci 2020; 21:E7498. [PMID: 33053658 PMCID: PMC7593911 DOI: 10.3390/ijms21207498] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/16/2020] [Revised: 09/29/2020] [Accepted: 10/08/2020] [Indexed: 11/17/2022] Open
Abstract
Siderophores are iron-complexing compounds synthesized by bacteria and fungi. They are low molecular weight compounds (500-1500 Daltons) possessing high affinity for iron(III). Since 1970 a large number of siderophores have been characterized, the majority using hydroxamate or catecholate as functional groups. The biosynthesis of siderophores is typically regulated by the iron levels of the environment where the organism is located. Because of their exclusive affinity and specificity for iron(III), natural siderophores and their synthetic derivatives have been exploited in the treatment of human iron-overload diseases, as both diagnostic and therapeutic agents. Here, solid-phase approach for the preparation of hexadentate, peptide-based tricatecholato containing peptides is described. The versatility of the synthetic method allows for the design of a common scaffolding structure whereby diverse ligands can be conjugated. With so many possibilities, a computational approach has been developed which will facilitate the identification of those peptides which are capable of providing a high affinity iron(III) binding site. This study reports an integrated computational/synthetic approach towards a rational development of peptide-based siderophores.
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Affiliation(s)
- Ranko Gacesa
- Institute of Pharmaceutical Science, King’s College London, London SE1 9NH, UK; (R.G.); (A.A.P.T.); (A.C.); (R.H.)
- Department of Gastroenterology and Hepatology, University of Groningen and University Medical Center Groningen, 9713 GZ Groningen, The Netherlands
- Department of Genetics, University of Groningen and University Medical Center Groningen, 9713 AV Groningen, The Netherlands
| | - Andrea A. P. Tripodi
- Institute of Pharmaceutical Science, King’s College London, London SE1 9NH, UK; (R.G.); (A.A.P.T.); (A.C.); (R.H.)
| | - Agostino Cilibrizzi
- Institute of Pharmaceutical Science, King’s College London, London SE1 9NH, UK; (R.G.); (A.A.P.T.); (A.C.); (R.H.)
| | - Antonella Leggio
- Department of Pharmacy, Health and Nutritional Sciences, University of Calabria, 87036 Rende, Italy;
| | - Robert Hider
- Institute of Pharmaceutical Science, King’s College London, London SE1 9NH, UK; (R.G.); (A.A.P.T.); (A.C.); (R.H.)
| | - Vincenzo Abbate
- Department of Analytical, Environmental and Forensic Sciences, King’s College London, London SE1 9NH, UK
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7
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Sutton JE, Roy S, Chowdhury AU, Wu L, Wanhala AK, De Silva N, Jansone-Popova S, Hay BP, Cheshire MC, Windus TL, Stack AG, Navrotsky A, Moyer BA, Doughty B, Bryantsev VS. Molecular Recognition at Mineral Interfaces: Implications for the Beneficiation of Rare Earth Ores. ACS APPLIED MATERIALS & INTERFACES 2020; 12:16327-16341. [PMID: 32180402 DOI: 10.1021/acsami.9b22902] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
Ce-bastnäsite is the single largest mineral source for light rare-earth elements. In view of the growing industrial importance of rare-earth minerals, it is critical to develop more efficient methods for separating the valuable rare-earth-containing minerals from the surrounding gangue. In this work, we employ a combination of periodic density functional theory (DFT) and molecular mechanics (MM) calculations together with the de novo molecular design program HostDesigner to identify bis-phosphinate ligands that preferentially bind to the (100) Ce-bastnäsite surface rather than the (104) calcite surface. DFT calculations for a simple phosphinate ligand were employed to qualitatively understand key behaviors involved in ligand-metal, ligand-solvent, and solvent-metal interactions. These insights were then used to guide the search for flexible, rigid, and semirigid hydrocarbon linkers to identify candidate bis-phosphinate ligands with the potential to bind preferentially to Ce-bastnäsite. Among the five most promising bis-phosphinate ligands suggested by theoretical studies, three ligands were synthesized and their adsorption characteristics to bastnäsite (100) interfaces were characterized using vibrational sum-frequency (vSFG) spectroscopy, attenuated total reflectance Fourier transform infrared (ATR-FTIR) spectroscopy, and isothermal titration calorimetry (ITC). The efficacy of the selective interfacial molecular binding was demonstrated by identifying a bis-phosphinate ligand capable of providing an overall higher surface coverage of alkyl groups relative to a monophosphinate ligand. The results highlight the interplay between adsorption binding strength and maximum surface coverage in determining ligand efficiency to render the mineral surface hydrophobic. DFT calculations further indicate that all tested ligands have higher affinity for Ce-bastnäsite than for calcite. This is consistent with the ITC data showing stronger adsorption enthalpy to bastnäsite than to calcite, making these ligands promising candidates for selective flotation of Ce-bastnäsite.
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Affiliation(s)
- Jonathan E Sutton
- Chemical Sciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee 37831-6119, United States
| | - Santanu Roy
- Chemical Sciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee 37831-6119, United States
| | - Azhad U Chowdhury
- Chemical Sciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee 37831-6119, United States
| | - Lili Wu
- Peter A. Rock Thermochemistry Laboratory and NEAT ORU, University of California Davis, 1 Shields Avenue, Davis, California 95616, United States
| | - Anna K Wanhala
- Chemical Sciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee 37831-6119, United States
| | - Nuwan De Silva
- Department of Chemistry and Ames Laboratory, Iowa State University, Ames, Iowa 50011-3111, United States
| | - Santa Jansone-Popova
- Chemical Sciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee 37831-6119, United States
| | - Benjamin P Hay
- Supramolecular Design Institute, 127 Chestnut Hill Rd., Oak Ridge, Tennessee 37830-7185, United States
| | - Michael C Cheshire
- Chemical Sciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee 37831-6119, United States
| | - Theresa L Windus
- Department of Chemistry and Ames Laboratory, Iowa State University, Ames, Iowa 50011-3111, United States
| | - Andrew G Stack
- Chemical Sciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee 37831-6119, United States
| | - Alexandra Navrotsky
- Peter A. Rock Thermochemistry Laboratory and NEAT ORU, University of California Davis, 1 Shields Avenue, Davis, California 95616, United States
| | - Bruce A Moyer
- Chemical Sciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee 37831-6119, United States
| | - Benjamin Doughty
- Chemical Sciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee 37831-6119, United States
| | - Vyacheslav S Bryantsev
- Chemical Sciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee 37831-6119, United States
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8
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Bautista-Renedo JM, Cuevas-Yañez E, Reyes-Pérez H, Vargas R, Garza J, González-Rivas N. Non-covalent interactions between sertraline stereoisomers and 2-hydroxypropyl-β-cyclodextrin: a quantum chemistry analysis. RSC Adv 2020; 10:20202-20210. [PMID: 35520401 PMCID: PMC9054229 DOI: 10.1039/c9ra10218c] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/05/2019] [Accepted: 04/17/2020] [Indexed: 11/21/2022] Open
Abstract
Inclusion compounds formed between sertraline stereoisomers and β-cyclodextrin, and 2-hydroxypropyl-β-cyclodextrin, were analyzed by using quantum chemistry methods. The exploration of the potential energy surface was performed using chemical intuition and classical molecular mechanics. This approach delivered around 200 candidates for low energy adducts, which were optimized through the PBE0/6-31G(d,p) method, and after this process solvent effects were considered by the continuous solvent model. This analysis showed that β-cyclodextrin and 2-hydroxypropyl-β-cyclodextrin are good trappers of sertraline, although the isomers suggested by molecular dynamics presented higher binding energies than those obtained by chemical intuition. The role of hydrogen bonds in the formation of adducts was studied using the non-covalent interactions index and the quantum theory of atoms in molecules. In this article we concluded that these interactions are present in all adducts, however, they are not important in the stabilization of these inclusion compounds. The molecular electrostatic potential indicates that Coulomb interactions could be responsible for the formation of these systems, although sophisticated solvent models must be used to confirm this conclusion, which are impractical in this case because of the sizes involved in these systems. Inclusion compounds formed between sertraline stereoisomers and β-cyclodextrin, and 2-hydroxypropyl-β-cyclodextrin, were analyzed by using quantum chemistry methods.![]()
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Affiliation(s)
| | - Erick Cuevas-Yañez
- Centro Conjunto de Investigación en Química Sustentable UAEM-UNAM
- Toluca de Lerdo
- Mexico
| | | | - Rubicelia Vargas
- Departamento de Química
- División de Ciencias Básicas e Ingeniería
- Universidad Autónoma Metropolitana-Iztapalapa
- México D. F
- Mexico
| | - Jorge Garza
- Departamento de Química
- División de Ciencias Básicas e Ingeniería
- Universidad Autónoma Metropolitana-Iztapalapa
- México D. F
- Mexico
| | - Nelly González-Rivas
- Centro Conjunto de Investigación en Química Sustentable UAEM-UNAM
- Toluca de Lerdo
- Mexico
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9
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Workman DG, Hunter M, Wang S, Brandel J, Hubscher V, Dover LG, Tétard D. The influence of linkages between 1-hydroxy-2(1H)-pyridinone coordinating groups and a tris(2-aminoethyl)amine core in a novel series of synthetic hexadentate iron(III) chelators on antimicrobial activity. Bioorg Chem 2019; 95:103465. [PMID: 31855824 DOI: 10.1016/j.bioorg.2019.103465] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/19/2019] [Revised: 09/30/2019] [Accepted: 11/21/2019] [Indexed: 12/12/2022]
Abstract
Resistance of pathogens to antimicrobials is a major current healthcare concern. In a series of linked studies, we have investigated synthetic iron chelators based on hydroxy-pyridinone ligands as novel bacteriostatic agents. Herein we describe our synthesis of several useful building blocks based on the 1-hydroxy-2(1H)-pyridinone moiety, including a novel formyl derivative, which were combined with a tris(2-aminoethyl)amine core to obtain a series of new high-affinity hexadentate Fe(III) chelators. The design principle examined by this series is the size and flexibility of the linker between the core and the metal ligands. Measurement of the pKa and stability constants (Fe3+ and Cu2+) of representative coordinating groups was performed to help rationalise the biological activity of the chelators. The novel chelators were tested on a panel of representative microorganisms with some effectively inhibiting microbial growth. We demonstrate that the nature and position of the linker between the hydroxypyridinone and the tris(2-aminoethyl)amine core has considerable impact upon microbial growth inhibition and that both amide or amine linkages can give efficacious chelators.
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Affiliation(s)
- David G Workman
- Faculty of Health and Life Sciences, Northumbria University, Newcastle upon Tyne NE1 8ST, United Kingdom
| | - Michael Hunter
- Faculty of Health and Life Sciences, Northumbria University, Newcastle upon Tyne NE1 8ST, United Kingdom
| | - Shuning Wang
- Université de Strasbourg, IPHC, 25 rue Becquerel, 67087 Strasbourg, France; CNRS, UMR7178, 67087 Strasbourg, France
| | - Jérémy Brandel
- Université de Strasbourg, IPHC, 25 rue Becquerel, 67087 Strasbourg, France; CNRS, UMR7178, 67087 Strasbourg, France
| | - Véronique Hubscher
- Université de Strasbourg, IPHC, 25 rue Becquerel, 67087 Strasbourg, France; CNRS, UMR7178, 67087 Strasbourg, France
| | - Lynn G Dover
- Faculty of Health and Life Sciences, Northumbria University, Newcastle upon Tyne NE1 8ST, United Kingdom
| | - David Tétard
- Faculty of Health and Life Sciences, Northumbria University, Newcastle upon Tyne NE1 8ST, United Kingdom.
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10
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Zhang Q, Jin B, Zheng T, Tang X, Guo Z, Peng R. Hexadentate β-Dicarbonyl(bis-catecholamine) Ligands for Efficient Uranyl Cation Decorporation: Thermodynamic and Antioxidant Activity Studies. Inorg Chem 2019; 58:14626-14634. [PMID: 31613591 DOI: 10.1021/acs.inorgchem.9b02306] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The special linear dioxo cation structure of the uranyl cation, which relegates ligand coordination to an equatorial plane perpendicular to the O═U═O vector, poses an unusual challenge for the rational design of efficient chelating agents. Therefore, the planar hexadentate ligand rational design employed in this work incorporates two bidentate catecholamine (CAM) chelating moieties and a flexible linker with a β-dicarbonyl chelating moiety (β-dicarbonyl(CAM)2 ligands). The solution thermodynamics of β-dicarbonyl(CAM)2 with a uranyl cation was investigated by potentiometric and spectrophotometric titrations. The results demonstrated that the pUO22+ values are significantly higher than for the previously reported TMA(2Li-1,2-HOPO)2, and efficient chelation of the uranyl cation was realized by the planar hexadentate β-dicarbonyl(CAM)2. The efficient chelating ability of β-dicarbonyl(CAM)2 was attributed to the presence of the more flexible β-dicarbonyl chelating linker and planar hexadentate structure, which favors the geometric arrangement between ligand and uranyl coordinative preference. Meanwhile, β-dicarbonyl(CAM)2 also exhibits higher antiradical efficiency in comparison to butylated hydroxyanisole. These results indicated that β-dicarbonyl(CAM)2 has potential application prospects as a chelating agent for efficient chelation of a uranyl cation.
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Affiliation(s)
- Qingchun Zhang
- State Key Laboratory of Environment-friendly Energy Materials , Southwest University of Science and Technology , Mianyang 621010 , People's Republic of China
| | - Bo Jin
- State Key Laboratory of Environment-friendly Energy Materials , Southwest University of Science and Technology , Mianyang 621010 , People's Republic of China
| | - Tian Zheng
- State Key Laboratory of Environment-friendly Energy Materials , Southwest University of Science and Technology , Mianyang 621010 , People's Republic of China
| | - Xingyan Tang
- Sichuan Research Center of New Materials, Institute of Chemical Materials , China Academy of Engineering Physics , Chengdu 610200 , People's Republic of China
| | - Zhicheng Guo
- School of National Defense Science and Technology , Southwest University of Science and Technology , Mianyang 621010 , People's Republic of China
| | - Rufang Peng
- State Key Laboratory of Environment-friendly Energy Materials , Southwest University of Science and Technology , Mianyang 621010 , People's Republic of China
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11
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Ironing out pyoverdine's chromophore structure: serendipity or design? J Biol Inorg Chem 2019; 24:659-673. [PMID: 31214860 DOI: 10.1007/s00775-019-01678-x] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/08/2019] [Accepted: 06/07/2019] [Indexed: 10/26/2022]
Abstract
Pyoverdines are Pseudomonas aeruginosa's primary siderophores. These molecules, composed of a fluorescent chromophore attached to a peptide chain of 6-14 amino acids, are synthesized by the bacterium to scavenge iron (essential to its survival and growth) from its environment. Hijacking the siderophore pathway to use pyoverdine-antibiotic compounds in a Trojan horse approach has shown promise but remains very challenging because of the synthetic efforts involved. Indeed, both possible approaches (grafting an antibiotic on pyoverdine harvested from Pseudomonas or designing a total synthesis route) are costly, time-consuming and low-yield tasks. Designing comparatively simple analogs featuring the salient properties of the original siderophore is thus crucial for the conception of novel antibiotics to fight bacterial resistance. In this work, we focus on the replacement of the pyoverdine chromophore, a major roadblock on the synthetic pathway. We propose three simpler analogs and evaluate their ability to complex iron and interact with the FpvA transporter using molecular modeling techniques. Based on these results, we discuss the role of the native chromophore's main features (polycyclicity, positive charge, flexibility) on pyoverdine's ability to bind iron and be recognized by membrane transporter FpvA and propose guidelines for the design of effective synthetic siderophores.
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12
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New hexadentate tris(dopamine) as iron chelating agent: Synthesis, solution thermodynamic stability and antioxidant activity studies. Polyhedron 2019. [DOI: 10.1016/j.poly.2018.12.053] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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13
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Zhang Q, Jin B, Wang X, Lei S, Shi Z, Zhao J, Liu Q, Peng R. The mono(catecholamine) derivatives as iron chelators: synthesis, solution thermodynamic stability and antioxidant properties research. ROYAL SOCIETY OPEN SCIENCE 2018; 5:171492. [PMID: 30110407 PMCID: PMC6030290 DOI: 10.1098/rsos.171492] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/06/2017] [Accepted: 05/02/2018] [Indexed: 06/08/2023]
Abstract
There is a growing interest in the development of new iron chelators as novel promising therapeutic strategies for neurodegenerative disorders. In this article, a series of mono(catecholamine) derivatives, 2,3-bis(hydroxy)-N-(hydroxyacyl)benzamide, containing a pendant hydroxy, have been synthesized and fully characterized by nuclear magnetic resonance, Fourier transform infrared spectroscopy and mass spectrum. The thermodynamic stability of the chelators with FeIII, MgII and ZnII ions was then investigated. The chelators enable formation of (3 : 1) FeIII complexes with high thermodynamic stability and exhibited improved selectivity to FeIII ion. Meanwhile, the results of 1,1-diphenyl-2-picryl-hydrazyl assays of mono(catecholamine) derivatives indicated that they all possess excellent antioxidant properties. These results support the hypothesis that the mono(catecholamine) derivatives be used as high-affinity chelator for iron overload situations without depleting essential metal ions, such as MgII and ZnII ions.
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Affiliation(s)
- Qingchun Zhang
- State Key Laboratory Cultivation Base for Nonmetal Composites and Functional Materials, Southwest University of Science and Technology, Mianyang 621010, People's Republic of China
- School of Materials Science and Engineering, Southwest University of Science and Technology, Mianyang 621010, People's Republic of China
| | - Bo Jin
- State Key Laboratory Cultivation Base for Nonmetal Composites and Functional Materials, Southwest University of Science and Technology, Mianyang 621010, People's Republic of China
| | - Xiaofang Wang
- State Key Laboratory Cultivation Base for Nonmetal Composites and Functional Materials, Southwest University of Science and Technology, Mianyang 621010, People's Republic of China
| | - Shan Lei
- State Key Laboratory Cultivation Base for Nonmetal Composites and Functional Materials, Southwest University of Science and Technology, Mianyang 621010, People's Republic of China
| | - Zhaotao Shi
- School of Materials Science and Engineering, Southwest University of Science and Technology, Mianyang 621010, People's Republic of China
| | - Jia Zhao
- School of Materials Science and Engineering, Southwest University of Science and Technology, Mianyang 621010, People's Republic of China
| | - Qiangqiang Liu
- Research Center of Laser Fusion, China Academy of Engineering Physics, Mianyang 621010, People's Republic of China
| | - Rufang Peng
- State Key Laboratory Cultivation Base for Nonmetal Composites and Functional Materials, Southwest University of Science and Technology, Mianyang 621010, People's Republic of China
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14
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Jiang N, Yuan Z, Li T, Zhu Y, Chen YS, Lin L, Zhang J, Chan YT, Wang J. Synthesis and Characterization of Ferrocene Based Hemicages. J Org Chem 2018; 83:4824-4830. [PMID: 29595264 DOI: 10.1021/acs.joc.8b00146] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
We present a series of tripodal ligands L1-3, which fold into hemicages C1-3 by using coordination-driven dynamic combinational chemistry. The identities of these hemicages were characterized using 1H NMR, 1H-1H COSY, DOSY, and ESI-TWIM-MS. Free rotation of the ferrocene structural units in the ligands affords an adaptable directionality, which is essential for the construction of these hemicages. Encapsulation of adamantane by C2 indicates the presence of a well-defined inner cavity as the binding pocket.
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Affiliation(s)
- Nianqiang Jiang
- School of Chemistry , Sun Yat-Sen University , Guangzhou 510275 , People's Republic of China
| | - Ziyong Yuan
- School of Chemistry , Sun Yat-Sen University , Guangzhou 510275 , People's Republic of China
| | - Tao Li
- School of Chemistry , Sun Yat-Sen University , Guangzhou 510275 , People's Republic of China
| | - Yanpeng Zhu
- School of Chemistry , Sun Yat-Sen University , Guangzhou 510275 , People's Republic of China
| | - Yu-Sheng Chen
- Department of Chemistry , National Taiwan University , Taipei 10617 , Taiwan, Republic of China
| | - Liqiong Lin
- School of Chemistry , Sun Yat-Sen University , Guangzhou 510275 , People's Republic of China
| | - Jingrui Zhang
- School of Chemistry , Sun Yat-Sen University , Guangzhou 510275 , People's Republic of China
| | - Yi-Tsu Chan
- Department of Chemistry , National Taiwan University , Taipei 10617 , Taiwan, Republic of China
| | - Jiaobing Wang
- School of Chemistry , Sun Yat-Sen University , Guangzhou 510275 , People's Republic of China
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15
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Johnstone TC, Nolan EM. Determination of the Molecular Structures of Ferric Enterobactin and Ferric Enantioenterobactin Using Racemic Crystallography. J Am Chem Soc 2017; 139:15245-15250. [PMID: 28956921 PMCID: PMC5748154 DOI: 10.1021/jacs.7b09375] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
Enterobactin is a secondary metabolite produced by Enterobacteriaceae for acquiring iron, an essential metal nutrient. The biosynthesis and utilization of enterobactin permits many Gram-negative bacteria to thrive in environments where low soluble iron concentrations would otherwise preclude survival. Despite extensive work carried out on this celebrated molecule since its discovery over 40 years ago, the ferric enterobactin complex has eluded crystallographic structural characterization. We report the successful growth of single crystals containing ferric enterobactin using racemic crystallization, a method that involves cocrystallization of a chiral molecule with its mirror image. The structures of ferric enterobactin and ferric enantioenterobactin obtained in this work provide a definitive assignment of the stereochemistry at the metal center and reveal secondary coordination sphere interactions. The structures were employed in computational investigations of the interactions of these complexes with two enterobactin-binding proteins, which illuminate the influence of metal-centered chirality on these interactions. This work highlights the utility of small-molecule racemic crystallography for obtaining elusive structures of coordination complexes.
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Affiliation(s)
- Timothy C. Johnstone
- Department of Chemistry, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, MA 02139, USA
| | - Elizabeth M. Nolan
- Department of Chemistry, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, MA 02139, USA
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16
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New tris(dopamine) derivative as an iron chelator. Synthesis, solution thermodynamic stability, and antioxidant research. J Inorg Biochem 2017; 171:29-36. [DOI: 10.1016/j.jinorgbio.2017.03.003] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/20/2016] [Revised: 03/09/2017] [Accepted: 03/21/2017] [Indexed: 11/19/2022]
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17
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Novel enterobactin analogues as potential therapeutic chelating agents: Synthesis, thermodynamic and antioxidant studies. Sci Rep 2016; 6:34024. [PMID: 27671769 PMCID: PMC5037427 DOI: 10.1038/srep34024] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/29/2016] [Accepted: 09/06/2016] [Indexed: 11/21/2022] Open
Abstract
A series of novel hexadentate enterobactin analogues, which contain three catechol chelating moieties attached to different molecular scaffolds with flexible alkyl chain lengths, were prepared. The solution thermodynamic stabilities of the complexes with uranyl, ferric(III), and zinc(II) ions were then investigated. The hexadentate ligands demonstrate effective binding ability to uranyl ion, and the average uranyl affinities are two orders of magnitude higher than 2,3-dihydroxy-N1,N4-bis[(1,2-hydroxypyridinone-6-carboxamide)ethyl]terephthalamide [TMA(2Li-1,2-HOPO)2] ligand with similar denticity. The high affinity of hexadentate ligands could be due to the presence of the flexible scaffold, which favors the geometric agreement between the ligand and the uranyl coordination preference. The hexadentate ligands also exhibit higher antiradical efficiency than butylated hydroxyanisole (BHA). These results provide a basis for further studies on the potential applications of hexadentate ligands as therapeutic chelating agents.
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18
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Workman DG, Hunter M, Dover LG, Tétard D. Synthesis of novel Iron(III) chelators based on triaza macrocycle backbone and 1-hydroxy-2(H)-pyridin-2-one coordinating groups and their evaluation as antimicrobial agents. J Inorg Biochem 2016; 160:49-58. [DOI: 10.1016/j.jinorgbio.2016.04.018] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2015] [Revised: 04/04/2016] [Accepted: 04/12/2016] [Indexed: 12/19/2022]
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19
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McCann BW, Silva ND, Windus TL, Gordon MS, Moyer BA, Bryantsev VS, Hay BP. Computer-Aided Molecular Design of Bis-phosphine Oxide Lanthanide Extractants. Inorg Chem 2016; 55:5787-803. [DOI: 10.1021/acs.inorgchem.5b02995] [Citation(s) in RCA: 35] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Billy W. McCann
- Chemical Sciences Division, Oak Ridge National Laboratory, 1 Bethel Valley Road, Oak Ridge, Tennessee 37831-6119, United States
| | - Nuwan De Silva
- Department of Chemistry and Ames Laboratory, Iowa State University, Ames, Iowa 50011-3111, United States
| | - Theresa L. Windus
- Department of Chemistry and Ames Laboratory, Iowa State University, Ames, Iowa 50011-3111, United States
| | - Mark S. Gordon
- Department of Chemistry and Ames Laboratory, Iowa State University, Ames, Iowa 50011-3111, United States
| | - Bruce A. Moyer
- Chemical Sciences Division, Oak Ridge National Laboratory, 1 Bethel Valley Road, Oak Ridge, Tennessee 37831-6119, United States
| | - Vyacheslav S. Bryantsev
- Chemical Sciences Division, Oak Ridge National Laboratory, 1 Bethel Valley Road, Oak Ridge, Tennessee 37831-6119, United States
| | - Benjamin P. Hay
- Supramolecular Design Institute, 127 Chestnut Hill Road, Oak Ridge, Tennessee 37830-7185, United States
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20
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Salem ME, Darweesh AF, Farag AM, Elwahy AH. 2-Bromo-1-(1H-pyrazol-4-yl)ethanone: versatile precursors for novel mono-, bis- and poly{6-(1H-pyrazol-4-yl)-[1,2,4]triazolo[3,4-b][1,3,4]thiadiazines}. Tetrahedron 2016. [DOI: 10.1016/j.tet.2015.12.024] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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21
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Abdelhamid IA, Darweesh AF, Elwahy AH. Synthesis and characterization of poly(2,6-dimethyl-4-phenyl-1,4-dihydropyridinyl)arenes as novel multi-armed molecules. Tetrahedron Lett 2015. [DOI: 10.1016/j.tetlet.2015.11.015] [Citation(s) in RCA: 28] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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22
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Abstract
This Account focuses on the coordination chemistry of the microbial iron chelators called siderophores. The initial research (early 1970s) focused on simple analogs of siderophores, which included hydroxamate, catecholate, or hydroxycarboxylate ligands. The subsequent work increasingly focused on the transport of siderophores and their microbial iron transport. Since these are pseudo-octahedral complexes often composed of bidentate ligands, there is chirality at the metal center that in principle is independent of the ligand chirality. It has been shown in many cases that chiral recognition of the complex occurs. Many techniques have been used to elucidate the iron uptake processes in both Gram-positive (single membrane) and Gram-negative (double membrane) bacteria. These have included the use of radioactive labels (of ligand, metal, or both), kinetically inert metal complexes, and Mössbauer spectroscopy. In general, siderophore recognition and transport involves receptors that recognize the metal chelate portion of the iron-siderophore complex. A second, to date less commonly found, mechanism called the siderophore shuttle involves the receptor binding an apo-siderophore. Since one of the primary ways that microbes compete with each other for iron stores is the strength of their competing siderophore complexes, it became important early on to characterize the solution thermodynamics of these species. Since the acidity of siderophores varies significantly, just the stability constant does not give a direct measure of the relative competitive strength of binding. For this reason, the pM value is compared. The pM, like pH, is a measure of the negative log of the free metal ion concentration, typically calculated at pH 7.4, and standard total concentrations of metal and ligand. The characterization of the electronic structure of ferric siderophores has done much to help explain the high stability of these complexes. A new chapter in siderophore science has emerged with the characterization of what are now called siderocalins. Initially found as a protein of the human innate immune system, these proteins bind both ferric and apo-siderophores to inactivate the siderophore transport system and hence deny iron to an invading pathogenic microbe. Siderocalins also can play a role in iron transport of the host, particularly in the early stages of fetal development. Finally, it is speculated that the molecular targets of siderocalins in different species differ based on the siderophore structures of the most important bacterial pathogens of those species.
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Affiliation(s)
- Kenneth N. Raymond
- Department of Chemistry, University of California, Berkeley, California 94720-1460, United States
| | - Benjamin E. Allred
- Department of Chemistry, University of California, Berkeley, California 94720-1460, United States
| | - Allyson K. Sia
- Department of Chemistry, University of California, Berkeley, California 94720-1460, United States
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23
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Queirós C, Leite A, Silva AM, Gameiro P, de Castro B, Rangel M. Synthesis and spectroscopic characterization of a new tripodal hexadentate iron chelator incorporating catechol units. Polyhedron 2015. [DOI: 10.1016/j.poly.2014.10.003] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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24
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Bergeron RJ, Wiegand J, McManis JS, Bharti N. Desferrithiocin: a search for clinically effective iron chelators. J Med Chem 2014; 57:9259-91. [PMID: 25207964 PMCID: PMC4255733 DOI: 10.1021/jm500828f] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/30/2014] [Indexed: 01/19/2023]
Abstract
The successful search for orally active iron chelators to treat transfusional iron-overload diseases, e.g., thalassemia, is overviewed. The critical role of iron in nature as a redox engine is first described, as well as how primitive life forms and humans manage the metal. The problems that derive when iron homeostasis in humans is disrupted and the mechanism of the ensuing damage, uncontrolled Fenton chemistry, are discussed. The solution to the problem, chelator-mediated iron removal, is clear. Design options for the assembly of ligands that sequester and decorporate iron are reviewed, along with the shortcomings of the currently available therapeutics. The rationale for choosing desferrithiocin, a natural product iron chelator (a siderophore), as a platform for structure-activity relationship studies in the search for an orally active iron chelator is thoroughly developed. The study provides an excellent example of how to systematically reengineer a pharmacophore in order to overcome toxicological problems while maintaining iron clearing efficacy and has led to three ligands being evaluated in human clinical trials.
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Affiliation(s)
- Raymond J. Bergeron
- Department of Medicinal Chemistry, University of Florida, Box 100485 JHMHC, Gainesville, Florida 32610-0485, United States
| | - Jan Wiegand
- Department of Medicinal Chemistry, University of Florida, Box 100485 JHMHC, Gainesville, Florida 32610-0485, United States
| | - James S. McManis
- Department of Medicinal Chemistry, University of Florida, Box 100485 JHMHC, Gainesville, Florida 32610-0485, United States
| | - Neelam Bharti
- Department of Medicinal Chemistry, University of Florida, Box 100485 JHMHC, Gainesville, Florida 32610-0485, United States
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25
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Rosario-Amorin D, Ouizem S, Dickie DA, Paine RT, Cramer RE, Hay BP, Podair J, Delmau LH. Synthesis and Lanthanide Coordination Chemistry of Phosphine Oxide Decorated Dibenzothiophene and Dibenzothiophene Sulfone Platforms. Inorg Chem 2014; 53:5698-711. [DOI: 10.1021/ic500471w] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Affiliation(s)
- Daniel Rosario-Amorin
- Department of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, United States
| | - Sabrina Ouizem
- Department of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, United States
| | - Diane A. Dickie
- Department of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, United States
| | - Robert T. Paine
- Department of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, United States
| | - Roger E. Cramer
- Department
of Chemistry, University of Hawaii, Honolulu, Hawaii 96822, United States
| | - Benjamin P. Hay
- Chemical Sciences Division, Oak Ridge National Laboratory, P.O. Box 2008, Oak Ridge, Tennessee 37831, United States
| | - Julien Podair
- Chemical Sciences Division, Oak Ridge National Laboratory, P.O. Box 2008, Oak Ridge, Tennessee 37831, United States
| | - Lætitia H. Delmau
- Chemical Sciences Division, Oak Ridge National Laboratory, P.O. Box 2008, Oak Ridge, Tennessee 37831, United States
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26
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Ouizem S, Pailloux SL, Ray AD, Duesler EN, Dickie DA, Paine RT, Hay BP. Synthesis and Selected Reactivity Studies of a Dissymmetric (PhosphinoylmethylpyridineN-Oxide) Methylamine Platform. European J Org Chem 2014. [DOI: 10.1002/ejoc.201400120] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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27
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Baramov T, Keijzer K, Irran E, Mösker E, Baik MH, Süssmuth R. Synthesis and structural characterization of hexacoordinate silicon, germanium, and titanium complexes of the E. coli siderophore enterobactin. Chemistry 2013; 19:10536-42. [PMID: 23821482 DOI: 10.1002/chem.201301825] [Citation(s) in RCA: 41] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/13/2013] [Indexed: 11/07/2022]
Abstract
The E. coli siderophore enterobactin, one of the strongest Fe(III) chelators known to date, is also capable of binding Si(IV) under physiological conditions. We report on the synthesis and structural characterization of the tris(catecholate) Si(IV) -enterobactin complex and its Ge(IV) and Ti(IV) analogues. Comparative structural analysis, supported by quantum-chemical calculations, reveals the correlation between the ionic radius and the structural changes in enterobactin upon complexation.
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Affiliation(s)
- Todor Baramov
- Technische Universität Berlin, Fakultät II, Institut für Chemie, Strasse des 17. Juni 124, 10623 Berlin, Germany
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28
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Vukovic S, Hay BP. De Novo Structure-Based Design of Bis-amidoxime Uranophiles. Inorg Chem 2013; 52:7805-10. [DOI: 10.1021/ic401089u] [Citation(s) in RCA: 44] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Sinisa Vukovic
- Chemical Sciences
Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee 37831-6119,
United States
| | - Benjamin P. Hay
- Chemical Sciences
Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee 37831-6119,
United States
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29
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Pailloux SL, Rosario-Amorin D, Chakravarty M, Camus JM, Smith KA, Duesler EN, Dickie DA, Paine RT, Klausmeyer KK, Padron DA, Hay BP, Delmau LH. Synthesis and Properties of New (Phosphinoylmethyl)Pyridine N-Oxides. Z Anorg Allg Chem 2013. [DOI: 10.1002/zaac.201300099] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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30
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Rosario-Amorin D, Ouizem S, Dickie DA, Wen Y, Paine RT, Gao J, Grey JK, de Bettencourt-Dias A, Hay BP, Delmau LH. Synthesis, Lanthanide Coordination Chemistry, and Liquid–Liquid Extraction Performance of CMPO-Decorated Pyridine and Pyridine N-Oxide Platforms. Inorg Chem 2013; 52:3063-83. [DOI: 10.1021/ic3025342] [Citation(s) in RCA: 43] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Daniel Rosario-Amorin
- Department of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, United
States
| | - Sabrina Ouizem
- Department of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, United
States
| | - Diane A. Dickie
- Department of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, United
States
| | - Yufeng Wen
- Department of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, United
States
| | - Robert T. Paine
- Department of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, United
States
| | - Jian Gao
- Department of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, United
States
| | - John K. Grey
- Department of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, United
States
| | | | - Benjamin P. Hay
- Chemical Sciences Division, Oak Ridge National Laboratory, P.O. Box 2008, Oak Ridge,
Tennessee 37831, United States
| | - Lætitia H. Delmau
- Chemical Sciences Division, Oak Ridge National Laboratory, P.O. Box 2008, Oak Ridge,
Tennessee 37831, United States
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31
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Esrafili MD, Alizadeh V. A theoretical study on bonding and energy aspects of and [LnL3 · H2O]3+complexes (Ln = La, Eu, Gd, L · u; L = β-diketone, β-dithioketone, β-diphosphine oxide). Mol Phys 2012. [DOI: 10.1080/00268976.2012.670279] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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32
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Inorganic and organometallic hemicage podates and cage cryptates incorporating a benzene platform. Coord Chem Rev 2012. [DOI: 10.1016/j.ccr.2012.02.001] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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33
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Rosario-Amorin D, Duesler EN, Paine RT, Hay BP, Delmau LH, Reilly SD, Gaunt AJ, Scott BL. Synthesis and Coordination Chemistry of Phosphine Oxide Decorated Dibenzofuran Platforms. Inorg Chem 2012; 51:6667-81. [DOI: 10.1021/ic300301d] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
Affiliation(s)
- Daniel Rosario-Amorin
- Department of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, United
States
| | - Eileen N. Duesler
- Department of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, United
States
| | - Robert T. Paine
- Department of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, United
States
| | - Benjamin P. Hay
- Chemical Sciences
Division, Oak Ridge National Laboratory, P.O. Box 2008, Oak Ridge, Tennessee 37831, United States
| | - Lætitia H. Delmau
- Chemical Sciences
Division, Oak Ridge National Laboratory, P.O. Box 2008, Oak Ridge, Tennessee 37831, United States
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34
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Harrington JM, Bargar JR, Jarzecki AA, Roberts JG, Sombers LA, Duckworth OW. Trace metal complexation by the triscatecholate siderophore protochelin: structure and stability. Biometals 2011; 25:393-412. [PMID: 22187125 DOI: 10.1007/s10534-011-9513-7] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/11/2011] [Accepted: 12/01/2011] [Indexed: 11/29/2022]
Abstract
Although siderophores are generally viewed as biological iron uptake agents, recent evidence has shown that they may play significant roles in the biogeochemical cycling and biological uptake of other metals. One such siderophore that is produced by A. vinelandii is the triscatecholate protochelin. In this study, we probe the solution chemistry of protochelin and its complexes with environmentally relevant trace metals to better understand its effect on metal uptake and cycling. Protochelin exhibits low solubility below pH 7.5 and degrades gradually in solution. Electrochemical measurements of protochelin and metal-protochelin complexes reveal a ligand half-wave potential of 200 mV. The Fe(III)Proto(3-) complex exhibits a salicylate shift in coordination mode at circumneutral to acidic pH. Coordination of Mn(II) by protochelin above pH 8.0 promotes gradual air oxidation of the metal center to Mn(III), which accelerates at higher pH values. The Mn(III)Proto(3-) complex was found to have a stability constant of log β(110) = 41.6. Structural parameters derived from spectroscopic measurements and quantum mechanical calculations provide insights into the stability of the Fe(III)Proto(3-), Fe(III)H(3)Proto, and Mn(III)Proto(3-) complexes. Complexation of Co(II) by protochelin results in redox cycling of Co, accompanied by accelerated degradation of the ligand at all solution pH values. These results are discussed in terms of the role of catecholate siderophores in environmental trace metal cycling and intracellular metal release.
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Affiliation(s)
- James M Harrington
- Soil Science Department, North Carolina State University, Raleigh, NC 27695-7619, USA
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Ma M, Kong L, Li X, Jin H, Zhao X, Wen K. Synthesis and Supramolecular Assemblies of Tripodal 1,3,5-Tris(phenoxymethyl)-2,4,6-triethylbenzene Analogues. CHINESE J CHEM 2011. [DOI: 10.1002/cjoc.201180271] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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Peuckert F, Ramos-Vega A, Miethke M, Schwörer C, Albrecht A, Oberthür M, Marahiel M. The Siderophore Binding Protein FeuA Shows Limited Promiscuity toward Exogenous Triscatecholates. ACTA ACUST UNITED AC 2011; 18:907-19. [DOI: 10.1016/j.chembiol.2011.05.006] [Citation(s) in RCA: 38] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/08/2010] [Revised: 04/14/2011] [Accepted: 05/04/2011] [Indexed: 11/24/2022]
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St-Pierre G, Ladouceur S, Fortin D, Zysman-Colman E. Fraternal twin iridium hemicage chelates. Dalton Trans 2011; 40:11726-31. [DOI: 10.1039/c1dt11236h] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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38
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Barbazán P, Hagenbach A, Oehlke E, Abram U, Carballo R, Rodríguez-Hermida S, Vázquez-López EM. Tricarbonyl Rhenium(I) and Technetium(I) Complexes with Hydrazones Derived from 4,5-Diazafluoren-9-one and 1,10-Phenanthroline-5,6-dione. Eur J Inorg Chem 2010. [DOI: 10.1002/ejic.201000522] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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39
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Werner EJ, Botta M, Aime S, Raymond KN. Effect of a mesitylene-based ligand cap on the relaxometric properties of Gd(III) hydroxypyridonate MRI contrast agents. CONTRAST MEDIA & MOLECULAR IMAGING 2010; 4:220-9. [PMID: 19839031 DOI: 10.1002/cmmi.281] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Abstract
A series of new Gd(III) hydroxypyridonate complexes featuring a mesitylene (ME)-derived ligand cap has been prepared. Relaxometric characterization reveals that the complexes tend to form large aggregates in solution with slow tumbling rates, as estimated from NMRD analysis, and unique pH-dependent relaxivities. The solution behavior and relaxometric properties are compared with those observed for analogous TREN-capped compounds, and the potential for use of these new ME-capped complexes as pH-responsive MRI contrast agents is explored.
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Affiliation(s)
- Eric J Werner
- Department of Chemistry, University of California, Berkeley, CA 94720-1460, USA
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40
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Structural and electronic structure differences due to the O–H···O and O–H···S bond formation in selected benzamide derivatives: a first-principles molecular dynamics study. Theor Chem Acc 2009. [DOI: 10.1007/s00214-009-0612-2] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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41
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Birkmann B, Seidel WW, Pape T, Ehlers AW, Lammertsma K, Ekkehardt Hahn F. Coordination chemistry of the sulfur analog of tricatechol siderophores. Dalton Trans 2009:7350-2. [DOI: 10.1039/b911014n] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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42
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Crumbliss AL, Harrington JM. Iron sequestration by small molecules: Thermodynamic and kinetic studies of natural siderophores and synthetic model compounds. ADVANCES IN INORGANIC CHEMISTRY 2009. [DOI: 10.1016/s0898-8838(09)00204-9] [Citation(s) in RCA: 76] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
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43
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Pintér Á, Haberhauer G. Synthesis and Investigation of a Chiral Enterobactin Analogue Based on a Macrocyclic Peptide Scaffold. Chemistry 2008; 14:11061-8. [DOI: 10.1002/chem.200801552] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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44
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Tripodal amine catechol ligands: A fascinating class of chelators for aluminium(III). J Inorg Biochem 2008; 102:1581-8. [DOI: 10.1016/j.jinorgbio.2008.02.006] [Citation(s) in RCA: 38] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/24/2007] [Revised: 01/24/2008] [Accepted: 02/13/2008] [Indexed: 11/18/2022]
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45
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Yang CT, Sreerama SG, Hsieh WY, Liu S. Synthesis and Characterization of a Novel Macrocyclic Chelator with 3-Hydroxy-4-Pyrone Chelating Arms and Its Complexes with Medicinally Important Metals. Inorg Chem 2008; 47:2719-27. [PMID: 18281940 DOI: 10.1021/ic7022506] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Chang-Tong Yang
- School of Health Sciences, Purdue University, 550 Stadium Mall Drive, West Lafayette, Indiana 47907
| | - Subramanya G. Sreerama
- School of Health Sciences, Purdue University, 550 Stadium Mall Drive, West Lafayette, Indiana 47907
| | - Wen-Yuan Hsieh
- School of Health Sciences, Purdue University, 550 Stadium Mall Drive, West Lafayette, Indiana 47907
| | - Shuang Liu
- School of Health Sciences, Purdue University, 550 Stadium Mall Drive, West Lafayette, Indiana 47907
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Guerra KP, Delgado R. Homo-and heterodinuclear complexes of the tris(catecholamide) derivative of a tetraazamacrocycle with Fe3+, Cu2+and Zn2+metal ions. Dalton Trans 2008:539-50. [DOI: 10.1039/b712916e] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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47
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Batey HD, Whitwood AC, Duhme-Klair AK. Synthesis, Characterization, Solid-State Structures, and Spectroscopic Properties of Two Catechol-Based Luminescent Chemosensors for Biologically Relevant Oxometalates. Inorg Chem 2007; 46:6516-28. [PMID: 17616125 DOI: 10.1021/ic700554n] [Citation(s) in RCA: 47] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The new heteroditopic ligand 2,3-dihydroxy-N-(1,10-phenanthroline-5-yl)benzamide (H2-L3) was synthesized and coordinated to [Ru(bpy)2(phen)]2+- and [ReBr(CO)3(phen)]-type luminophores (bpy = 2,2'-bipyridine and phen = 1,10-phenanthroline). The resulting chemosensors [Ru(bpy)2(H2-L3)]2+ and [ReBr(CO)3(H2-L3)] were fully characterized and their solid-state structures and spectroscopic properties were investigated to assess how the photophysical properties of the luminescent signaling units affect the performance of the sensors. [Ru(bpy)2(H2-L3)]2+ and [ReBr(CO)3(H2-L3)] both signal the presence and concentration of molybdate and vanadate in aqueous acetonitrile through a decrease in emission intensity. [ReBr(CO)3(H2-L3)] also detects tungstate. Due to the higher emission intensity of the Ru-based sensor, its detection limits for molybdate (43 microg L(-1)) and vanadate (24 microg L(-1)) are almost 1 order of magnitude lower than the ones achieved with the Re-based sensor. The optimum working pH of the chemosensors is determined by the pKa values of the 2-hydroxy-groups of the receptor units: pH 4 for [ReBr(CO)3(H2-L3)] and pH 3 for [Ru(bpy)2(H2-L3)]2+. Both sensors are selective: equimolar amounts of PO4(3-), SO4(2-), ReO4-, Mn(II), Fe(III), Co(II), Ni(II), Cu(II), and Zn(II) do not interfere with the detection of molybdate or vanadate.
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Affiliation(s)
- Helen D Batey
- Department of Chemistry, University of York, Heslington, York, UK
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Müller A, Wilkinson AJ, Wilson KS, Duhme-Klair AK. An [{Fe(mecam)}2]6- bridge in the crystal structure of a ferric enterobactin binding protein. Angew Chem Int Ed Engl 2007; 45:5132-6. [PMID: 16927323 DOI: 10.1002/anie.200601198] [Citation(s) in RCA: 50] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Affiliation(s)
- Axel Müller
- Department of Chemistry, University of York, York, YO10 5DD, UK
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49
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Sumby CJ, Steel PJ. Coordination chemistry of di-2-pyridylamine-based bridging heterocyclic ligands: A structural study of coordination polymers and discrete dinuclear complexes. Inorganica Chim Acta 2007. [DOI: 10.1016/j.ica.2006.10.031] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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50
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Guarise C, Prins LJ, Scrimin P. Fully symmetrical functionalization of multivalent scaffold molecules on solid support. Tetrahedron 2006. [DOI: 10.1016/j.tet.2006.09.053] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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