1
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Romero-Ben E, Castillejos MC, Rosales-Barrios C, Expósito M, Ruda P, Castillo PM, Nardecchia S, de Vicente J, Khiar N. Divergent approach to nanoscale glycomicelles and photo-responsive supramolecular glycogels. Implications for drug delivery and photoswitching lectin affinity. J Mater Chem B 2023; 11:10189-10205. [PMID: 37853786 DOI: 10.1039/d3tb01713c] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2023]
Abstract
The field of stimuli-responsive supramolecular biomaterials has rapidly advanced in recent years, with potential applications in diverse areas such as cancer theranostics, tissue engineering, and catalysis. However, designing molecular materials that exhibit predetermined hierarchical self-assembly to control the size, morphology, surface chemistry, and responsiveness of the final nanostructures remains a significant challenge. In this study, we present a divergent synthetic approach for the fabrication of spherical micelles and functional 1D-glyconanotube-based photoresponsive gels from structurally related diazobenzene/diacetylene glycolipids. The resulting nanostructures were characterized using NMR, TEM, and SEM, confirming the formation of spherical and tubular nanostructures in both the gel and solution states. Upon UV irradiation, a reversible gel-sol transition was observed, resulting from the photoswitching of the azobenzene unit from the stretched trans form to the compact, metastable cis form. Our gels were shown to enable spatio-temporal control of the adhesion and release of the lectin Concanavalin A, demonstrating potential use as regenerable biomaterials to fight against infections with toxins and pathogens. Additionally, our micelles and gels were evaluated as nanocontainers for loading and controlled release of hydrophobic dyes and antitumoural agents, suggesting their possible use as smart theranostic drug delivery systems.
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Affiliation(s)
- Elena Romero-Ben
- Asymmetric Synthesis and Functional Nanosystems Group, Instituto de Investigaciones Químicas (IIQ), CSIC-Universidad de Sevilla, Avda. Américo Vespucio 49, 41092, Seville, Spain.
| | - M Carmen Castillejos
- Asymmetric Synthesis and Functional Nanosystems Group, Instituto de Investigaciones Químicas (IIQ), CSIC-Universidad de Sevilla, Avda. Américo Vespucio 49, 41092, Seville, Spain.
| | - Cristian Rosales-Barrios
- Asymmetric Synthesis and Functional Nanosystems Group, Instituto de Investigaciones Químicas (IIQ), CSIC-Universidad de Sevilla, Avda. Américo Vespucio 49, 41092, Seville, Spain.
| | - María Expósito
- Asymmetric Synthesis and Functional Nanosystems Group, Instituto de Investigaciones Químicas (IIQ), CSIC-Universidad de Sevilla, Avda. Américo Vespucio 49, 41092, Seville, Spain.
| | - Pilar Ruda
- Asymmetric Synthesis and Functional Nanosystems Group, Instituto de Investigaciones Químicas (IIQ), CSIC-Universidad de Sevilla, Avda. Américo Vespucio 49, 41092, Seville, Spain.
| | - Paula M Castillo
- Asymmetric Synthesis and Functional Nanosystems Group, Instituto de Investigaciones Químicas (IIQ), CSIC-Universidad de Sevilla, Avda. Américo Vespucio 49, 41092, Seville, Spain.
| | - Stefania Nardecchia
- Department of Applied Physics and Excellence Research Unit 'Modeling Nature' (MNat), Faculty of Sciences, University of Granada, C/Fuentenueva s/n, 18071 - Granada, Spain
| | - Juan de Vicente
- Department of Applied Physics and Excellence Research Unit 'Modeling Nature' (MNat), Faculty of Sciences, University of Granada, C/Fuentenueva s/n, 18071 - Granada, Spain
| | - Noureddine Khiar
- Asymmetric Synthesis and Functional Nanosystems Group, Instituto de Investigaciones Químicas (IIQ), CSIC-Universidad de Sevilla, Avda. Américo Vespucio 49, 41092, Seville, Spain.
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2
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Wang Z, Maisonneuve S, Xie J. One-Pot Synthesis of Water-Soluble Glycosyl Azobenzenes and Their Photoswitching Properties in Water. J Org Chem 2022; 87:16165-16174. [PMID: 36445318 DOI: 10.1021/acs.joc.2c01511] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Molecular photoswitches capable of reversible photoswitching in aqueous media are highly demanded for various biological applications and photopharmacology. Carbohydrates, as natural and abundant raw materials, provide opportunity to make photoswitches water-soluble through linking sugar to the photoswitching molecules. We have developed a one-pot synthesis method to prepare water-soluble glycosyl azobenzenes through DMC (2-chloro-1,3-dimethylimidazolinium chloride)-mediated glycosylation between sugar and dihydroxyazobenzenes (DHABs) in aqueous media. The scope of the method has been investigated with different mono- and disaccharides, as well as with p,p'- and o,o'-DHAB, with excellent 1,2-trans stereoselectivity. Diglycosylation products can also be obtained with an excess amount of monosaccharides in one step. We have also demonstrated the possibility of further functionalization on the azobenzene moiety of glycosyl azobenzene. Both mono- and diglycosyl azobenzenes showed excellent photoswitching properties in water with high fatigue resistance and good thermostability for the Z-isomers. Excellent E → Z photoisomerization of both mono- and diglycosylated azobenzenes (Z/E = 99/1) is observed under illumination at 365 nm, while back Z → E photoisomerization can be achieved with blue light (with E/Z = 80/20 at PSS485 for the diglycosyl derivative).
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Affiliation(s)
- Zhaoxin Wang
- Université Paris-Saclay, ENS Paris-Saclay, CNRS, Photophysique et Photochimie Supramoléculaires et Macromoléculaires, 91190 Gif-sur-Yvette, France
| | - Stéphane Maisonneuve
- Université Paris-Saclay, ENS Paris-Saclay, CNRS, Photophysique et Photochimie Supramoléculaires et Macromoléculaires, 91190 Gif-sur-Yvette, France
| | - Juan Xie
- Université Paris-Saclay, ENS Paris-Saclay, CNRS, Photophysique et Photochimie Supramoléculaires et Macromoléculaires, 91190 Gif-sur-Yvette, France
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3
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Volarić J, Buter J, Schulte AM, van den Berg KO, Santamaría-Aranda E, Szymanski W, Feringa BL. Design and Synthesis of Visible-Light-Responsive Azobenzene Building Blocks for Chemical Biology. J Org Chem 2022; 87:14319-14333. [PMID: 36285612 PMCID: PMC9639001 DOI: 10.1021/acs.joc.2c01777] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
Abstract
Tetra-ortho-fluoro-azobenzenes are a class of photoswitches useful for the construction of visible-light-controlled molecular systems. They can be used to achieve spatio-temporal control over the properties of a chosen bioactive molecule. However, the introduction of different substituents to the tetra-fluoro-azobenzene core can significantly affect the photochemical properties of the switch and compromise biocompatibility. Herein, we explored the effect of useful substituents, such as functionalization points, attachment handles, and water-solubilizing groups, on the photochemical properties of this photochromic system. In general, all the tested fluorinated azobenzenes exhibited favorable photochemical properties, such as high photostationary state distribution and long half-lives, both in organic solvents and in water. One of the azobenzene building blocks was functionalized with a trehalose group to enable the uptake of the photoswitch into mycobacteria. Following metabolic uptake and incorporation of the trehalose-based azobenzene in the mycobacterial cell wall, we demonstrated photoswitching of the azobenzene in the isolated total lipid extract.
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Affiliation(s)
- Jana Volarić
- Stratingh
Institute for Chemistry, University of Groningen, 9747 AG Groningen, The Netherlands
| | - Jeffrey Buter
- Stratingh
Institute for Chemistry, University of Groningen, 9747 AG Groningen, The Netherlands
| | - Albert M. Schulte
- Stratingh
Institute for Chemistry, University of Groningen, 9747 AG Groningen, The Netherlands
| | | | - Eduardo Santamaría-Aranda
- Stratingh
Institute for Chemistry, University of Groningen, 9747 AG Groningen, The Netherlands,Departamento
de Química, Universidad de la Rioja, Centro de investigación en Síntesis Química, Madre de Dios 53, 26006 Logroño, Spain
| | - Wiktor Szymanski
- Stratingh
Institute for Chemistry, University of Groningen, 9747 AG Groningen, The Netherlands,Department
of Radiology, Medical Imaging, Center, University of Groningen, University Medical Center Groningen, 9713 GZ Groningen, The Netherlands,
| | - Ben L. Feringa
- Stratingh
Institute for Chemistry, University of Groningen, 9747 AG Groningen, The Netherlands,
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4
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Berry J, Lindhorst TK, Despras G. Sulfur and Azobenzenes, a Profitable Liaison: Straightforward Synthesis of Photoswitchable Thioglycosides with Tunable Properties. Chemistry 2022; 28:e202200354. [PMID: 35537915 PMCID: PMC9401004 DOI: 10.1002/chem.202200354] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/04/2022] [Indexed: 01/07/2023]
Abstract
Azobenzene photoswitches are valuable tools for controlling properties of molecular systems with light. We have been investigating azobenzene glycoconjugates to probe carbohydrate‐protein interactions and to design glycoazobenzene macrocycles with chiroptical and physicochemical properties modulated by light irradiation. To date, direct conjugation of glycosides to azobenzenes was performed by reactions providing target compounds in limited yields. We therefore sought a more effective and reliable coupling method. In this paper, we report on a straightforward thioarylation of azobenzene derivatives with glycosyl thiols as well as other thiols, thereby increasing the scope of azobenzene conjugation. Even challenging unsymmetrical conjugates can be achieved in good yields via sequential or one‐pot procedures. Importantly, red‐shifted azoswitches, which are addressed with visible light, were easily functionalized. Additionally, by oxidation of the sulfide bridge to the respective sulfones, both the photochromic and the thermal relaxation properties of the core azobenzene can be tuned. Utilizing this option, we realized orthogonal three‐state photoswitching in mixtures containing two distinct azobenzene thioglycosides.
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Affiliation(s)
- Jonathan Berry
- Otto Diels Institute of Organic Chemistry, Christiana Albertina University of Kiel, Otto-Hahn-Platz 3/4, 24118, Kiel, Germany
| | - Thisbe K Lindhorst
- Otto Diels Institute of Organic Chemistry, Christiana Albertina University of Kiel, Otto-Hahn-Platz 3/4, 24118, Kiel, Germany
| | - Guillaume Despras
- Otto Diels Institute of Organic Chemistry, Christiana Albertina University of Kiel, Otto-Hahn-Platz 3/4, 24118, Kiel, Germany.,Laboratoire des IMRCP, Université de Toulouse, CNRS UMR 5623, Université Paul Sabatier, 118 route de Narbonne, 31062, Toulouse Cedex 9, France
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5
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Osswald U, Boneberg J, Wittmann V. Photoswitching Affinity and Mechanism of Multivalent Lectin Ligands. Chemistry 2022; 28:e202200267. [PMID: 35286724 PMCID: PMC9325471 DOI: 10.1002/chem.202200267] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/26/2022] [Indexed: 11/09/2022]
Abstract
Multivalent receptor–ligand binding is a key principle in a plethora of biological recognition processes. Immense binding affinities can be achieved with the correct spatial orientation of the ligands. Accordingly, the incorporation of photoswitches, which can be used to reversibly change the spatial orientation of molecules, into multivalent ligands is a means to alter the binding affinity and possibly also the binding mode of such ligands. We report a divalent ligand for the model lectin wheat germ agglutinin (WGA) containing an arylazopyrazole photoswitch. This switch, which has recently been introduced as an alternative to the more commonly used azobenzene moiety, is characterized by almost quantitative E/Z photoswitching in both directions, high quantum yields, and high thermal stability of the Z isomer. The ligand was designed in a way that only one of the isomers is able to bridge adjacent binding sites of WGA leading to a chelating binding mode. Photoswitching induces an unprecedentedly high change in lectin binding affinity as determined by isothermal titration calorimetry (ITC). Furthermore, additional dynamic light scattering (DLS) data suggest that the binding mode of the ligand changes from chelating binding of the E isomer to crosslinking binding of the Z isomer.
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Affiliation(s)
- Uwe Osswald
- Department of ChemistryUniversity of Konstanz78457KonstanzGermany
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6
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Narayanan V, Bobbili KB, Sivaji N, Jayaprakash NG, Suguna K, Surolia A, Sekhar A. Structure and Carbohydrate Recognition by the Nonmitogenic Lectin Horcolin. Biochemistry 2022; 61:464-478. [PMID: 35225598 DOI: 10.1021/acs.biochem.1c00778] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Lectins are sugar-binding proteins that have shown considerable promise as antiviral agents because of their ability to interact with envelope glycoproteins present on the surface of viruses such as HIV-1. However, their therapeutic potential has been compromised by their mitogenicity that stimulates uncontrolled division of T-lymphocytes. Horcolin, a member of the jacalin family of lectins, tightly binds the HIV-1 envelope glycoprotein gp120 and neutralizes HIV-1 particles but is nonmitogenic. In this report, we combine X-ray crystallography and NMR spectroscopy to obtain atomic-resolution insights into the structure of horcolin and the molecular basis for its carbohydrate recognition. Each protomer of the horcolin dimer adopts a canonical β-prism I fold with three Greek key motifs and carries two carbohydrate-binding sites. The carbohydrate molecule binds in a negatively charged pocket and is stabilized by backbone and side chain hydrogen bonds to conserved residues in the ligand-binding loop. NMR titrations reveal a two-site binding mode and equilibrium dissociation constants for the two binding sites determined from two-dimensional (2D) lineshape modeling are 4-fold different. Single-binding-site variants of horcolin confirm the dichotomy in binding sites and suggest that there is allosteric communication between the two sites. An analysis of the horcolin structure shows a network of hydrogen bonds linking the two carbohydrate-binding sites directly and through a secondary binding site, and this coupling between the two sites is expected to assume importance in the interaction of horcolin with high-mannose glycans found on viral envelope glycoproteins.
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Affiliation(s)
- Vaishali Narayanan
- Molecular Biophysics Unit, Indian Institute of Science, Bangalore 560 012, India
| | - Kishore Babu Bobbili
- Molecular Biophysics Unit, Indian Institute of Science, Bangalore 560 012, India
| | - Nukathoti Sivaji
- Molecular Biophysics Unit, Indian Institute of Science, Bangalore 560 012, India
| | - Nisha G Jayaprakash
- Molecular Biophysics Unit, Indian Institute of Science, Bangalore 560 012, India
| | - Kaza Suguna
- Molecular Biophysics Unit, Indian Institute of Science, Bangalore 560 012, India
| | - Avadhesha Surolia
- Molecular Biophysics Unit, Indian Institute of Science, Bangalore 560 012, India
| | - Ashok Sekhar
- Molecular Biophysics Unit, Indian Institute of Science, Bangalore 560 012, India
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7
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Volarić J, Szymanski W, Simeth NA, Feringa BL. Molecular photoswitches in aqueous environments. Chem Soc Rev 2021; 50:12377-12449. [PMID: 34590636 PMCID: PMC8591629 DOI: 10.1039/d0cs00547a] [Citation(s) in RCA: 125] [Impact Index Per Article: 41.7] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2021] [Indexed: 12/17/2022]
Abstract
Molecular photoswitches enable dynamic control of processes with high spatiotemporal precision, using light as external stimulus, and hence are ideal tools for different research areas spanning from chemical biology to smart materials. Photoswitches are typically organic molecules that feature extended aromatic systems to make them responsive to (visible) light. However, this renders them inherently lipophilic, while water-solubility is of crucial importance to apply photoswitchable organic molecules in biological systems, like in the rapidly emerging field of photopharmacology. Several strategies for solubilizing organic molecules in water are known, but there are not yet clear rules for applying them to photoswitchable molecules. Importantly, rendering photoswitches water-soluble has a serious impact on both their photophysical and biological properties, which must be taken into consideration when designing new systems. Altogether, these aspects pose considerable challenges for successfully applying molecular photoswitches in aqueous systems, and in particular in biologically relevant media. In this review, we focus on fully water-soluble photoswitches, such as those used in biological environments, in both in vitro and in vivo studies. We discuss the design principles and prospects for water-soluble photoswitches to inspire and enable their future applications.
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Affiliation(s)
- Jana Volarić
- Centre for Systems Chemistry, Stratingh Institute for Chemistry, Faculty for Science and Engineering, University of Groningen, Nijenborgh 4, 9747 AG Groningen, The Netherlands.
| | - Wiktor Szymanski
- Centre for Systems Chemistry, Stratingh Institute for Chemistry, Faculty for Science and Engineering, University of Groningen, Nijenborgh 4, 9747 AG Groningen, The Netherlands.
- Department of Radiology, Medical Imaging Center, University of Groningen, University Medical Centre Groningen, Hanzeplein 1, 9713 GZ Groningen, The Netherlands
| | - Nadja A Simeth
- Centre for Systems Chemistry, Stratingh Institute for Chemistry, Faculty for Science and Engineering, University of Groningen, Nijenborgh 4, 9747 AG Groningen, The Netherlands.
- Institute for Organic and Biomolecular Chemistry, University of Göttingen, Tammannstr. 2, 37077 Göttingen, Germany
| | - Ben L Feringa
- Centre for Systems Chemistry, Stratingh Institute for Chemistry, Faculty for Science and Engineering, University of Groningen, Nijenborgh 4, 9747 AG Groningen, The Netherlands.
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8
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Noori M, Shafaatian B, Notash B. New organoplatinum complexes containing di-2-pyridyl ketone; single crystal structure determination, solvatochromism and kinetic investigations. Inorganica Chim Acta 2020. [DOI: 10.1016/j.ica.2020.119851] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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9
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Berry J, Despras G, Lindhorst TK. A compatibility study on the glycosylation of 4,4′-dihydroxyazobenzene. RSC Adv 2020; 10:17432-17437. [PMID: 35515580 PMCID: PMC9053478 DOI: 10.1039/d0ra02435j] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2020] [Accepted: 04/22/2020] [Indexed: 12/25/2022] Open
Abstract
Photoresponsive glycoconjugates based on the azobenzene photoswitch are valuable molecules which can be used as tools for the investigation of carbohydrate–protein interactions or as precursors of shape-switchable molecular architectures, for example. To access such compounds, glycosylation of 4,4′-dihydroxyazobenzene (DHAB) is a critical step, frequently giving heterogeneous results because DHAB is a challenging glycosyl acceptor. Therefore, DHAB glucosylation was studied using nine different glycosyl donors, and reaction conditions were systematically varied in order to find a reliable procedure, especially towards the preparation of azobenzene bis-glucosides. Particular emphasis was put on glucosyl donors which were differentiated at the primary 6-position (N3, OAc) for further functionalisation. The present study allowed us to identify suitable glycosyl donors and reaction conditions matching with DHAB, affording the bis-glycosylated products in fair yields and good stereocontrol. The glycosylation of 4,4′-dihydroxyazobenzene was investigated to identify suitable conditions providing access to valuable photoswitchable glycoconjugates.![]()
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Affiliation(s)
- Jonathan Berry
- Otto Diels Institute of Organic Chemistry
- Christiana Albertina University of Kiel
- 24118 Kiel
- Germany
| | - Guillaume Despras
- Otto Diels Institute of Organic Chemistry
- Christiana Albertina University of Kiel
- 24118 Kiel
- Germany
| | - Thisbe K. Lindhorst
- Otto Diels Institute of Organic Chemistry
- Christiana Albertina University of Kiel
- 24118 Kiel
- Germany
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10
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Despras G, Möckl L, Heitmann A, Stamer I, Bräuchle C, Lindhorst TK. A Photoswitchable Trivalent Cluster Mannoside to Probe the Effects of Ligand Orientation in Bacterial Adhesion. Chembiochem 2019; 20:2373-2382. [DOI: 10.1002/cbic.201900269] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2019] [Indexed: 11/08/2022]
Affiliation(s)
- Guillaume Despras
- Otto Diels Institute of Organic ChemistryChristiana Albertina University of Kiel Otto-Hahn-Platz 3–4 24118 Kiel Germany
| | - Leonhard Möckl
- Department of Chemistry and Center for NanoScience (CeNS)University of Munich (LMU) Butenandtstrasse 11 81377 Munich Germany
| | - Anne Heitmann
- Otto Diels Institute of Organic ChemistryChristiana Albertina University of Kiel Otto-Hahn-Platz 3–4 24118 Kiel Germany
| | - Insa Stamer
- Department of Chemistry EducationLeibniz Institute for Science and Mathematics Education Olshausenstrasse 62 24118 Kiel Germany
| | - Christoph Bräuchle
- Department of Chemistry and Center for NanoScience (CeNS)University of Munich (LMU) Butenandtstrasse 11 81377 Munich Germany
| | - Thisbe K. Lindhorst
- Otto Diels Institute of Organic ChemistryChristiana Albertina University of Kiel Otto-Hahn-Platz 3–4 24118 Kiel Germany
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11
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Lin C, Maisonneuve S, Theulier C, Xie J. Synthesis and Photochromic Properties of Azobenzene-Derived Glycomacrolactones. European J Org Chem 2019. [DOI: 10.1002/ejoc.201801832] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
Affiliation(s)
- Chaoqi Lin
- PPSM, ENS Paris-Saclay, CNRS; Université Paris-Saclay; 94235 Cachan France
| | | | - Cyril Theulier
- PPSM, ENS Paris-Saclay, CNRS; Université Paris-Saclay; 94235 Cachan France
| | - Juan Xie
- PPSM, ENS Paris-Saclay, CNRS; Université Paris-Saclay; 94235 Cachan France
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12
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Poonthiyil V, Reise F, Despras G, Lindhorst TK. Microwave-Assisted Facile Synthesis of Red-Shifted Azobenzene Glycoconjugates. European J Org Chem 2018. [DOI: 10.1002/ejoc.201801078] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Affiliation(s)
- Vivek Poonthiyil
- Otto Diels Institute of Organic Chemistry; Christiana Albertina University of Kiel; Otto-Hahn-Platz 3/4 24118 Kiel Germany
| | - Franziska Reise
- Otto Diels Institute of Organic Chemistry; Christiana Albertina University of Kiel; Otto-Hahn-Platz 3/4 24118 Kiel Germany
| | - Guillaume Despras
- Otto Diels Institute of Organic Chemistry; Christiana Albertina University of Kiel; Otto-Hahn-Platz 3/4 24118 Kiel Germany
| | - Thisbe K. Lindhorst
- Otto Diels Institute of Organic Chemistry; Christiana Albertina University of Kiel; Otto-Hahn-Platz 3/4 24118 Kiel Germany
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13
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Hu Y, Beshr G, Garvey CJ, Tabor RF, Titz A, Wilkinson BL. Photoswitchable Janus glycodendrimer micelles as multivalent inhibitors of LecA and LecB from Pseudomonas aeruginosa. Colloids Surf B Biointerfaces 2017; 159:605-612. [PMID: 28858663 DOI: 10.1016/j.colsurfb.2017.08.016] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/06/2017] [Revised: 07/31/2017] [Accepted: 08/10/2017] [Indexed: 12/18/2022]
Abstract
The first example of the self-assembly and lectin binding properties of photoswitchable glycodendrimer micelles is reported. Light-addressable micelles were assembled from a library of 12 amphiphilic Janus glycodendrimers composed of variable carbohydrate head groups and hydrophobic tail groups linked to an azobenzene core. Spontaneous association in water gave cylindrical micelles with uniform size distribution as determined by dynamic light scattering (DLS) and small angle neutron scattering (SANS). Trans-cis photoisomerization of the azobenzene dendrimer core was used to probe the self-assembly behaviour and lectin binding properties of cylindrical micelles, revealing moderate-to-potent inhibition of lectins LecA and LecB from Pseudomonas aeruginosa.
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Affiliation(s)
- Yingxue Hu
- School of Chemistry, Monash University, Victoria 3800, Australia
| | - Ghamdan Beshr
- Chemical Biology of Carbohydrates, Helmholtz Institute for Pharmaceutical Research Saarland (HIPS), D-66123 Saarbrücken, Germany; Deutsches Zentrum für Infektionsforschung, Standort Hannover, Braunschweig, Germany
| | - Christopher J Garvey
- Australian Centre for Neutron scattering, ANSTO, Lucas Heights, New South Wales 2234, Australia
| | - Rico F Tabor
- School of Chemistry, Monash University, Victoria 3800, Australia
| | - Alexander Titz
- Chemical Biology of Carbohydrates, Helmholtz Institute for Pharmaceutical Research Saarland (HIPS), D-66123 Saarbrücken, Germany; Deutsches Zentrum für Infektionsforschung, Standort Hannover, Braunschweig, Germany
| | - Brendan L Wilkinson
- School of Science and Technology, the University of New England, New South Wales 2351, Australia.
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14
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Benelli T, Lanzi M, Mazzocchetti L, Giorgini L. Chirality on Amorphous High-T g Polymeric Nanofilms: Optical Activity Amplification by Thermal Annealing. NANOMATERIALS (BASEL, SWITZERLAND) 2017; 7:E208. [PMID: 28763033 PMCID: PMC5575690 DOI: 10.3390/nano7080208] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/07/2017] [Revised: 07/10/2017] [Accepted: 07/27/2017] [Indexed: 11/22/2022]
Abstract
The chiroptical properties of amorphous chiral polymers functionalized with conjugated trans-azoaromatic chromophore linked to the backbone through a chiral cyclic pyrrolidine moiety of one single configuration at the solid state, as thin films, were investigated. For the first time nanometric thin films of amorphous polymers (not liquid crystals) showed a remarkable chiral amplification upon thermal treatment at a temperature close to their Tg. The side-chain azobenzene chromophores rearrangement driven by the enhanced chain mobility seems to favor the formation of nanodomains of conformationally ordered macromolecular chains with one prevailing helical handedness whose optical activity depends on the configuration of the intrinsic chirality of the monomeric units and which as a result are stable at room temperature for a long time.
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Affiliation(s)
- Tiziana Benelli
- Dipartimento di Chimica Industriale Toso Montanari and INSTM UdR-Bologna, University of Bologna, Viale Risorgimento 4, 40136 Bologna, Italy.
- Interdepartmental Center for Industrial Research on Advanced Applications in Mechanical Engineering and Materials Technology (CIRI-MAM), University of Bologna, Viale Risorgimento 2, 40136 Bologna, Italy.
| | - Massimiliano Lanzi
- Dipartimento di Chimica Industriale Toso Montanari and INSTM UdR-Bologna, University of Bologna, Viale Risorgimento 4, 40136 Bologna, Italy.
| | - Laura Mazzocchetti
- Dipartimento di Chimica Industriale Toso Montanari and INSTM UdR-Bologna, University of Bologna, Viale Risorgimento 4, 40136 Bologna, Italy.
- Interdepartmental Center for Industrial Research on Advanced Applications in Mechanical Engineering and Materials Technology (CIRI-MAM), University of Bologna, Viale Risorgimento 2, 40136 Bologna, Italy.
| | - Loris Giorgini
- Dipartimento di Chimica Industriale Toso Montanari and INSTM UdR-Bologna, University of Bologna, Viale Risorgimento 4, 40136 Bologna, Italy.
- Interdepartmental Center for Industrial Research on Advanced Applications in Mechanical Engineering and Materials Technology (CIRI-MAM), University of Bologna, Viale Risorgimento 2, 40136 Bologna, Italy.
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15
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Synthesis, spectral and computational analysis of 2-(N-bromoalkoxy)-5-(phenylazo)benzaldehydes and their oximes. J Mol Struct 2017. [DOI: 10.1016/j.molstruc.2017.01.018] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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16
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Hu Y, Zou W, Julita V, Ramanathan R, Tabor RF, Nixon-Luke R, Bryant G, Bansal V, Wilkinson BL. Photomodulation of bacterial growth and biofilm formation using carbohydrate-based surfactants. Chem Sci 2016; 7:6628-6634. [PMID: 28567253 PMCID: PMC5450525 DOI: 10.1039/c6sc03020c] [Citation(s) in RCA: 33] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/08/2016] [Accepted: 08/03/2016] [Indexed: 01/06/2023] Open
Abstract
Naturally occurring and synthetic carbohydrate amphiphiles have emerged as a promising class of antimicrobial and antiadhesive agents that act through a number of dynamic and often poorly understood mechanisms. In this paper, we provide the first report on the application of azobenzene trans-cis photoisomerization for effecting spatial and temporal control over bacterial growth and biofilm formation using carbohydrate-based surfactants. Photocontrollable surface tension studies and small angle neutron scattering (SANS) revealed the diverse geometries and dimensions of self-assemblies (micelles) made possible through variation of the head group and UV-visible light irradiation. Using these light-addressable amphiphiles, we demonstrate optical control over the antibacterial activity and formation of biofilms against multi-drug resistant (MDR) Pseudomonas aeruginosa, methicillin-resistant Staphylococcus aureus (MRSA) and Gram-negative Escherichia coli. To probe the mechanism of bioactivity further, we evaluated the impact of trans-cis photoisomerization in these surfactants on bacterial motility and revealed photomodulated enhancement in swarming motility in P. aeruginosa. These light-responsive amphiphiles should attract significant interest as a new class of antibacterial agents and as investigational tools for probing the complex mechanisms underpinning bacterial adhesion and biofilm formation.
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Affiliation(s)
- Yingxue Hu
- School of Chemistry , Monash University , Victoria 3800 , Australia
| | - Wenyue Zou
- Ian Potter NanoBioSensing Facility , NanoBiotechnology Research Laboratory , School of Science , RMIT University , Victoria 3000 , Australia .
| | - Villy Julita
- School of Chemistry , Monash University , Victoria 3800 , Australia
| | - Rajesh Ramanathan
- Ian Potter NanoBioSensing Facility , NanoBiotechnology Research Laboratory , School of Science , RMIT University , Victoria 3000 , Australia .
| | - Rico F Tabor
- School of Chemistry , Monash University , Victoria 3800 , Australia
| | - Reece Nixon-Luke
- Centre for Molecular and Nanoscale Physics , School of Science , RMIT University , Victoria 3000 , Australia
| | - Gary Bryant
- Centre for Molecular and Nanoscale Physics , School of Science , RMIT University , Victoria 3000 , Australia
| | - Vipul Bansal
- Ian Potter NanoBioSensing Facility , NanoBiotechnology Research Laboratory , School of Science , RMIT University , Victoria 3000 , Australia .
| | - Brendan L Wilkinson
- School of Science and Technology , The University of New England , New South Wales 2351 , Australia .
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17
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Müller C, Despras G, Lindhorst TK. Organizing multivalency in carbohydrate recognition. Chem Soc Rev 2016; 45:3275-302. [DOI: 10.1039/c6cs00165c] [Citation(s) in RCA: 155] [Impact Index Per Article: 19.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
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18
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Díaz-Lobo M, Garcia-Amorós J, Fita I, Velasco D, Guinovart JJ, Ferrer JC. Selective photoregulation of the activity of glycogen synthase and glycogen phosphorylase, two key enzymes in glycogen metabolism. Org Biomol Chem 2015; 13:7282-8. [PMID: 26055498 DOI: 10.1039/c5ob00796h] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
Abstract
Glycogen is a polymer of α-1,4- and α-1,6-linked glucose units that provides a readily available source of energy in living organisms. Glycogen synthase (GS) and glycogen phosphorylase (GP) are the two enzymes that control, respectively, the synthesis and degradation of this polysaccharide and constitute adequate pharmacological targets to modulate cellular glycogen levels, by means of inhibition of their catalytic activity. Here we report on the synthesis and biological evaluation of a selective inhibitor that consists of an azobenzene moiety glycosidically linked to the anomeric carbon of a glucose molecule. In the ground state, the more stable (E)-isomer of the azobenzene glucoside had a slight inhibitory effect on rat muscle GP (RMGP, IC50 = 4.9 mM) and Escherichia coli GS (EcGS, IC50 = 1.6 mM). After irradiation and subsequent conversion to the (Z)-form, the inhibitory potency of the azobenzene glucoside did not significantly change for RMGP (IC50 = 2.4 mM), while its effect on EcGS increased 50-fold (IC50 = 32 μM). Sucrose synthase 4 from potatoes, a glycosyltransferase that does not operate on glycogen, was only slightly inhibited by the (E)-isomer (IC50 = 0.73 mM). These findings could be rationalized on the basis of kinetic and computer-aided docking analysis, which indicated that both isomers of the azobenzene glucoside mimic the EcGS acceptor substrate and exert their inhibitory effect by binding to the glycogen subsite in the active center of the enzyme. The ability to selectively photoregulate the catalytic activity of key enzymes of glycogen metabolism may represent a new approach for the treatment of glycogen metabolism disorders.
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Affiliation(s)
- Mireia Díaz-Lobo
- Departament de Bioquímica i Biologia Molecular, Universitat de Barcelona, Av. Diagonal 645, E-08028, Barcelona, Spain.
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19
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Hu Y, Tabor RF, Wilkinson BL. Sweetness and light: design and applications of photo-responsive glycoconjugates. Org Biomol Chem 2015; 13:2216-25. [DOI: 10.1039/c4ob02296c] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Photoswitchable glycoconjugates are promising tools for studying biomolecular interactions and for the development of stimuli-responsive materials.
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Affiliation(s)
- Yingxue Hu
- School of Chemistry
- Monash University
- Australia
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20
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Hoffmann J, Kazmaier U. A straightforward approach towards cyclic photoactivatable tubulysin derivatives. Angew Chem Int Ed Engl 2014; 53:11356-60. [PMID: 25196233 DOI: 10.1002/anie.201405650] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/26/2014] [Revised: 07/28/2014] [Indexed: 01/17/2023]
Abstract
The development of a new photolabile protecting group containing an additional allyl functionality allows the synthesis of cyclic photoactivatable natural products. Cyclization occurs between the allyl moiety in the protecting group and a second double bond in the target molecule by means of ring-closing metathesis. Cyclization should increase the metabolic stability towards proteases. On the other hand, the conformational change should cause diminished biological activity. As illustrated for tubulysin derivatives, cyclic and photoactivatable drug candidates can easily be obtained in only two steps from simple building blocks through Ugi reaction and ring-closing metathesis. The photolabile protecting group is introduced by means of the isocyanide component during the Ugi reaction.
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Affiliation(s)
- Judith Hoffmann
- Institute for Organic Chemistry, Saarland University, P.O. Box 151150, 66041 Saarbrücken (Germany) http://www.uni-saarland.de/fak8/kazmaier
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Hoffmann J, Kazmaier U. Ein einfacher Zugang zu cyclischen photoaktivierbaren Tubulysin-Derivaten. Angew Chem Int Ed Engl 2014. [DOI: 10.1002/ange.201405650] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
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22
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Ponader D, Igde S, Wehle M, Märker K, Santer M, Bléger D, Hartmann L. Photoswitchable precision glycooligomers and their lectin binding. Beilstein J Org Chem 2014; 10:1603-12. [PMID: 25161717 PMCID: PMC4143111 DOI: 10.3762/bjoc.10.166] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2014] [Accepted: 06/17/2014] [Indexed: 11/23/2022] Open
Abstract
The synthesis of photoswitchable glycooligomers is presented by applying solid-phase polymer synthesis and functional building blocks. The obtained glycoligands are monodisperse and present azobenzene moieties as well as sugar ligands at defined positions within the oligomeric backbone and side chains, respectively. We show that the combination of molecular precision together with the photoswitchable properties of the azobenzene unit allows for the photosensitive control of glycoligand binding to protein receptors. These stimuli-sensitive glycoligands promote the understanding of multivalent binding and will be further developed as novel biosensors.
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Affiliation(s)
- Daniela Ponader
- Max Planck Institute of Colloids and Interfaces, Department of Biomolecular Systems, Research Campus Golm, 14424 Potsdam, Germany
| | - Sinaida Igde
- Max Planck Institute of Colloids and Interfaces, Department of Biomolecular Systems, Research Campus Golm, 14424 Potsdam, Germany
| | - Marko Wehle
- Max Planck Institute of Colloids and Interfaces, Department of Theory & Bio-Systems, Research Campus Golm, 14424 Potsdam, Germany
| | - Katharina Märker
- Max Planck Institute of Colloids and Interfaces, Department of Biomolecular Systems, Research Campus Golm, 14424 Potsdam, Germany
| | - Mark Santer
- Max Planck Institute of Colloids and Interfaces, Department of Theory & Bio-Systems, Research Campus Golm, 14424 Potsdam, Germany
| | - David Bléger
- Humboldt University, Department of Chemistry, Brook-Taylor-Str. 2, 12489 Berlin, Germany
| | - Laura Hartmann
- Max Planck Institute of Colloids and Interfaces, Department of Biomolecular Systems, Research Campus Golm, 14424 Potsdam, Germany
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23
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Ding L, Xu M, Wang J, Liao Y, Qiu J. Controlled synthesis of azobenzene functionalized homo and copolymers via direct acyclic diene metathesis polymerization. POLYMER 2014. [DOI: 10.1016/j.polymer.2014.02.021] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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24
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Zatsepin TS, Abrosimova LA, Monakhova MV, Le Thi Hien, Pingoud A, Kubareva EA, Oretskaya TS. Design of photocontrolled biomolecules based on azobenzene derivatives. RUSSIAN CHEMICAL REVIEWS 2013. [DOI: 10.1070/rc2013v082n10abeh004355] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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25
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Okada T, Isobe C, Wada T, Ezaki S, Minoura N. Switchable binding affinity of mannose tethered to collagen peptide by temperature-dependent triple-helix formation. Bioconjug Chem 2013; 24:841-5. [PMID: 23725448 DOI: 10.1021/bc3006013] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Novel glycopeptides were created with a view to regulate the bindings of carbohydrates to lectins as a means of controlling biological function. We synthesized glycopeptides containing mannose (Man) tethered to a collagen peptide moiety (MPOG10: -(Pro-Hyp-Gly)10- or MGPP10: -(Gly-Pro-Pro)10-). Circular dichroism spectra showed formation of a triple helical structure for MPOG10, and the melting temperature indicates that MPOG10 forms a more stable triple helical structure than MGPP10 in phosphate buffered saline (PBS). At 25 °C, fluorescence polarization (FP) values of MPOG10 and MGPP10 increased following the addition of concanavalin A (ConA), and the addition of α-methyl-mannose (MeMan) to a mixed solution of each glycopeptide with ConA resulted in a decrease in FP values. These results confirm that the previous increase in FP values observed was caused by ConA binding to Man on MPOG10 or MGPP10. The binding affinity of MPOG10 was higher than that of MGPP10, and the dissociation constant of MPOG10 to ConA was 1.9 × 10(-5) (mol/L). The observed binding of MPOG10 to ConA at 25 °C was reduced at higher temperature (50 °C). Therefore, the enhanced binding affinity of MPOG10 to ConA could be accounted for by formation of a clustered Man moiety triggered by the formation of a more stable triple helical structure of MPOG10 compared with MGPP10.
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Affiliation(s)
- Tomoko Okada
- School of Bioscience and Biotechnology, Tokyo University of Technology, Katakura, Hachioji, Tokyo 192-0982, Japan.
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26
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Guha S, Graf J, Göricke B, Diederichsen U. Nucleobase-caged peptide nucleic acids: PNA/PNA duplex destabilization and light-triggered PNA/PNA recognition. J Pept Sci 2013; 19:415-22. [PMID: 23649726 DOI: 10.1002/psc.2514] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/21/2013] [Revised: 03/22/2013] [Accepted: 03/24/2013] [Indexed: 01/29/2023]
Abstract
The 2-(o-nitrophenyl)-propyl (NPP) group is used as caging group to mask the nucleobases adenine and cytosine in N-(2-aminoethyl)glycine peptide nucleic acids (aeg-PNA). The adeninyl and cytosinyl nucleo amino acid building blocks Fmoc-a(NPP) -aeg-OH and Fmoc-c(NPP) -aeg-OH were synthesized and incorporated into PNA sequences by Fmoc solid phase synthesis relying on high stability of the NPP nucleobase protecting group toward Fmoc-cleavage, coupling, capping, and resin cleavage conditions. Removal of the nucleobase caging group was achieved by UV-LED irradiation at 365 nm. The nucleobase caging groups provided sterical crowding effecting the Watson-Crick base pairing, and thereby, the PNA double strand stabilities. Duplex formation can completely be suppressed for complementary PNA containing caging groups in both strands. PNA/PNA recognition can be completely restored by UV light-triggered release of the photolabile protecting group.
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Affiliation(s)
- Samit Guha
- Institut für Organische und Biomolekulare Chemie, Universität Göttingen, Tammannstraße 2, 37077 Göttingen, Germany
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27
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Moustafa ME, McCready MS, Puddephatt RJ. Photoswitchable Organoplatinum(IV) Complexes. Organometallics 2013. [DOI: 10.1021/om4000314] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Mohamed E. Moustafa
- Department of Chemistry, University of Western Ontario, London, Ontario, Canada N6A 5B7
| | - Matthew S. McCready
- Department of Chemistry, University of Western Ontario, London, Ontario, Canada N6A 5B7
| | - Richard J. Puddephatt
- Department of Chemistry, University of Western Ontario, London, Ontario, Canada N6A 5B7
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28
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Chabre YM, Roy R. Multivalent glycoconjugate syntheses and applications using aromatic scaffolds. Chem Soc Rev 2013; 42:4657-708. [PMID: 23400414 DOI: 10.1039/c3cs35483k] [Citation(s) in RCA: 200] [Impact Index Per Article: 18.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
Abstract
Glycan-protein interactions are of utmost importance in several biological phenomena. Although the variety of carbohydrate residues in mammalian cells is limited to less than a dozen different sugars, their spatial topographical presentation in what is now associated as the "glycocodes" provides the fundamental keys for specific and high affinity "lock-in" recognition events associated with a wide range of pathologies. Toward deciphering our understanding of these glycocodes, chemists have developed new creative tools that included dendrimer chemistry in order to provide monodisperse multivalent glycoconjugates. This review provides a survey of the numerous aromatic architectures generated for the multivalent presentation of relevant carbohydrates using covalent attachment or supramolecular self-assemblies. The basic concepts toward their controlled syntheses will be described using modern synthetic procedures with a particular emphasis on powerful organometallic methodologies. The large variety of dendritic aromatic scaffolds, together with a brief survey of their unique biophysical and biological properties will be critically reviewed. The distinctiveness of the resulting multivalent glycoarchitectures, encompassing glycoclusters, glycodendrimers and molecularly defined self-assemblies, in forming well organized cross-linked lattices with multivalent carbohydrate binding proteins (lectins) together with their photophysical, medical, and imaging properties will also be briefly highlighted. The topic will be presented in increasing order of aromatic backbone complexities and will end with fullerenes together with self-assembled nanostructures, thus complementing the various scaffolds described in this special thematic issue dedicated to multivalent glycoscience.
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Affiliation(s)
- Yoann M Chabre
- Pharmaqam - Department of Chemistry, Université du Québec à Montréal, P.O. Box 8888, Succ. Centre-ville, Montréal, Québec, Canada H3C 3P8
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29
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Bavireddi H, Bharate P, Kikkeri R. Probing carbohydrate–carbohydrate interactions by photoswitchable supramolecular glycoclusters. Chem Commun (Camb) 2013; 49:3988-90. [DOI: 10.1039/c3cc41025k] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
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30
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Manimekalai A, Balachander R. DFT and experimental determination of conformations of 2-(ethoxycarbonylmethoxy)-5-(arylazo)benzaldehydes and their oximes. MAGNETIC RESONANCE IN CHEMISTRY : MRC 2012; 50:765-771. [PMID: 22987368 DOI: 10.1002/mrc.3874] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/05/2012] [Revised: 08/16/2012] [Accepted: 08/27/2012] [Indexed: 06/01/2023]
Abstract
2-(Ethoxycarbonylmethoxy)-5-(arylazo)benzaldehydes 1-4 and their oximes 5-8 were synthesized and characterized by IR, (1)H and (13)C NMR spectroscopy. The favoured conformations of aldehydes 1-4 and oximes 5-8 were predicted theoretically. Selected geometrical parameters and charges were derived from optimized structures. IR, (1)H and (13)C NMR data were also computed using Gaussian-03 package and compared with the observed values. (15)N and (17)O chemical shifts were also determined theoretically.
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Affiliation(s)
- A Manimekalai
- Department of Chemistry, Annamalai University, Annamalainagar 608 002, India.
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31
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Merino E, Ribagorda M. Control over molecular motion using the cis-trans photoisomerization of the azo group. Beilstein J Org Chem 2012; 8:1071-90. [PMID: 23019434 PMCID: PMC3458724 DOI: 10.3762/bjoc.8.119] [Citation(s) in RCA: 296] [Impact Index Per Article: 24.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2012] [Accepted: 06/21/2012] [Indexed: 12/16/2022] Open
Abstract
Control over molecular motion represents an important objective in modern chemistry. Aromatic azobenzenes are excellent candidates as molecular switches since they can exist in two forms, namely the cis (Z) and trans (E) isomers, which can interconvert both photochemically and thermally. This transformation induces a molecular movement and a significant geometric change, therefore the azobenzene unit is an excellent candidate to build dynamic molecular devices. We describe selected examples of systems containing an azobenzene moiety and their motions and geometrical changes caused by external stimuli.
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Affiliation(s)
- Estíbaliz Merino
- Instituto de Química Orgánica General, Centro Superior de Investigaciones Científicas (CSIC), C/ Juan de la Cierva, 3, 28006, Madrid, Spain
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32
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Abstract
The photoisomerization of azobenzene has been known for almost 75 years but only recently has this process been widely applied to biological systems. The central challenge of how to productively couple the isomerization process to a large functional change in a biomolecule has been met in a number of instances and it appears that effective photocontrol of a large variety of biomolecules may be possible. This critical review summarizes key properties of azobenzene that enable its use as a photoswitch in biological systems and describes strategies for using azobenzene photoswitches to drive functional changes in peptides, proteins, nucleic acids, lipids, and carbohydrates (192 references).
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Affiliation(s)
- Andrew A Beharry
- Department of Chemistry, University of Toronto, 80 St. George St. Toronto, ON M5S 3H6, Canada
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33
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Gupta G, Surolia A, Sampathkumar SG. Lectin microarrays for glycomic analysis. OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY 2010; 14:419-36. [PMID: 20726799 DOI: 10.1089/omi.2009.0150] [Citation(s) in RCA: 80] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
Abstract
Glycomics is the study of comprehensive structural elucidation and characterization of all glycoforms found in nature and their dynamic spatiotemporal changes that are associated with biological processes. Glycocalyx of mammalian cells actively participate in cell-cell, cell-matrix, and cell-pathogen interactions, which impact embryogenesis, growth and development, homeostasis, infection and immunity, signaling, malignancy, and metabolic disorders. Relative to genomics and proteomics, glycomics is just growing out of infancy with great potential in biomedicine for biomarker discovery, diagnosis, and treatment. However, the immense diversity and complexity of glycan structures and their multiple modes of interactions with proteins pose great challenges for development of analytical tools for delineating structure function relationships and understanding glyco-code. Several tools are being developed for glycan profiling based on chromatography, mass spectrometry, glycan microarrays, and glyco-informatics. Lectins, which have long been used in glyco-immunology, printed on a microarray provide a versatile platform for rapid high throughput analysis of glycoforms of biological samples. Herein, we summarize technological advances in lectin microarrays and critically review their impact on glycomics analysis. Challenges remain in terms of expansion to include nonplant derived lectins, standardization for routine clinical use, development of recombinant lectins, and exploration of plant kingdom for discovery of novel lectins.
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Affiliation(s)
- Garima Gupta
- Molecular Biophysics Unit, Indian Institute of Science, Bangalore, India
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Takekuma SI, Fukuda K, Minematsu T, Takekuma H. Preparation and Structures of New Azobenzene Derivatives with a 3-Guaiazulenylvinyl Group. BULLETIN OF THE CHEMICAL SOCIETY OF JAPAN 2009. [DOI: 10.1246/bcsj.82.1398] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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35
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Takekuma SI, Fukuda K, Kawase Y, Minematsu T, Takekuma H. Preparation, Structures, and Properties of New Monocarbenium Ion Compounds Stabilized by a 3-Guaiazulenyl Group and an Azobenzene Unit: Comparative Studies on Three Delocalized π-Electron Systems. BULLETIN OF THE CHEMICAL SOCIETY OF JAPAN 2009. [DOI: 10.1246/bcsj.82.879] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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36
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Ding L, Zhang L, Han H, Huang W, Song C, Xie M, Zhang Y. Hyperbranched Azo-Polymers Synthesized by Acyclic Diene Metathesis Polymerization of an AB2 Monomer. Macromolecules 2009. [DOI: 10.1021/ma900412b] [Citation(s) in RCA: 53] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Liang Ding
- Department of Chemistry, East China Normal University, Shanghai 200062, China
| | - Liya Zhang
- Department of Chemistry, East China Normal University, Shanghai 200062, China
| | - Huijing Han
- Department of Chemistry, East China Normal University, Shanghai 200062, China
| | - Wei Huang
- Department of Chemistry, East China Normal University, Shanghai 200062, China
| | - Chunmei Song
- Department of Chemistry, East China Normal University, Shanghai 200062, China
| | - Meiran Xie
- Department of Chemistry, East China Normal University, Shanghai 200062, China
| | - Yiqun Zhang
- Department of Chemistry, East China Normal University, Shanghai 200062, China
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37
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Zhang M, Zhang R, Zhang AQ, Zhao Y, Wang T. Oxidation of Arylaminomagnesium Compounds by Copper Salts. JOURNAL OF CHEMICAL RESEARCH 2009. [DOI: 10.3184/030823409x401808] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
Oxidation of arylaminomagnesium compounds by cupric chloride has been investigated. A possible oxidation reaction mechanism is considered.
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Affiliation(s)
- Ming Zhang
- College of Chemistry, Jiangxi Normal University (Yaohu campus), 99 Ziyangdadao, Nanchang, Jiangxi 330022, P.R. China
| | - Rongli Zhang
- College of Chemistry, Jiangxi Normal University (Yaohu campus), 99 Ziyangdadao, Nanchang, Jiangxi 330022, P.R. China
| | - Ai-Qin Zhang
- Department of Environmental and Chemical Engineering, Nanchang Institute of Aeronautical Technology, Nanchang, Jiangxi, P.R. China
| | - Yongli Zhao
- College of Chemistry, Jiangxi Normal University (Yaohu campus), 99 Ziyangdadao, Nanchang, Jiangxi 330022, P.R. China
| | - Tao Wang
- College of Chemistry, Jiangxi Normal University (Yaohu campus), 99 Ziyangdadao, Nanchang, Jiangxi 330022, P.R. China
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38
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Jayaraman N. Multivalent ligand presentation as a central concept to study intricate carbohydrate–protein interactions. Chem Soc Rev 2009; 38:3463-83. [DOI: 10.1039/b815961k] [Citation(s) in RCA: 185] [Impact Index Per Article: 12.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
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39
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Uchiyama N, Kuno A, Tateno H, Kubo Y, Mizuno M, Noguchi M, Hirabayashi J. Optimization of evanescent-field fluorescence-assisted lectin microarray for high-sensitivity detection of monovalent oligosaccharides and glycoproteins. Proteomics 2008; 8:3042-50. [DOI: 10.1002/pmic.200701114] [Citation(s) in RCA: 48] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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40
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Angiolini L, Benelli T, Giorgini L. Photochromic and Photoresponsive Properties of Methacrylic Polymers Bearing Optically Active Hydroxysuccinimide in the Side Chain. MACROMOL CHEM PHYS 2007. [DOI: 10.1002/macp.200700160] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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Murthy BN, Sinha S, Surolia A, Indi SS, Jayaraman N. SPR and ITC determination of the kinetics and the thermodynamics of bivalent versus monovalent sugar ligand–lectin interactions. Glycoconj J 2007; 25:313-21. [DOI: 10.1007/s10719-007-9076-6] [Citation(s) in RCA: 34] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/24/2007] [Revised: 09/21/2007] [Accepted: 09/26/2007] [Indexed: 11/29/2022]
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Abstract
Biologically active compounds which are light-responsive offer experimental possibilities which are otherwise very difficult to achieve. Since light can be manipulated very precisely, for example, with lasers and microscopes rapid jumps in concentration of the active form of molecules are possible with exact control of the area, time, and dosage. The development of such strategies started in the 1970s. This review summarizes new developments of the last five years and deals with "small molecules", proteins, and nucleic acids which can either be irreversibly activated with light (these compounds are referred to as "caged compounds") or reversibly switched between an active and an inactive state.
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Affiliation(s)
- Günter Mayer
- Kekulé-Institut für Organische Chemie und Biochemie, Rheinische Friedrich-Wilhelms-Universität Bonn, Gerhard-Domagk-Strasse 1, 53121 Bonn, Germany.
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Carreño MC, García I, Núñez I, Merino E, Ribagorda M, Pieraccini S, Spada GP. Photoinduced Conformational Switch of Enantiopure Azobenzenes Controlled by a Sulfoxide. J Am Chem Soc 2007; 129:7089-100. [PMID: 17497861 DOI: 10.1021/ja070163o] [Citation(s) in RCA: 35] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Two series of enantiopure azobenzenes with a p-tolylsulfoxide at the ortho or meta position with respect to the azo group, have been regioselectively synthesized. Both can act as enantiopure molecular switches showing different structural features owing to the presence of the stereogenic sulfur. The photoisomerization process, studied by UV-vis, circular dichroism (CD), NMR, and chiral HPLC evidenced a double role of the sulfoxide. A transfer of chirality from the sulfoxide to the azo system was observed by CD in both cis and trans-isomers of the meta sulfinyl derivatives 3, whereas this perturbation was evident for the ortho sulfinyl series 7 only in the cis isomer. The NMR study evidenced that the s-cis rigid conformation of the bisaromatic sulfoxide was fixing a different orientation of the overall system in each series both in the trans and cis isomers, by forcing a final U-shaped structure in cis-3 and an S-shaped structure in cis-7. Very different values of specific optical rotations were measured in both trans and cis isomers, also reflecting the existence of distinct chiral entities in the photostationary states. The easy and reversible changes occurring between different conformational states could find applications in the photocontrol of several molecular switches.
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Affiliation(s)
- M Carmen Carreño
- Departamento de Química Orgánica (C-I), Universidad Autónoma de Madrid, Cantoblanco, 28049-Madrid, Spain.
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Natchiar SK, Suguna K, Surolia A, Vijayan M. Peanut agglutinin, a lectin with an unusual quaternary structure and interesting ligand binding properties. CRYSTALLOGR REV 2007. [DOI: 10.1080/08893110701382087] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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45
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Gokulnath S, Prabhuraja V, Sankar J, Chandrashekar TK. Smaragdyrin–Azobenzene Conjugates: Syntheses, Structure, and Spectral and Electrochemical Properties. European J Org Chem 2007. [DOI: 10.1002/ejoc.200600719] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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Zhu H, Wu S, Zeng F, Yao S, Zhao J, She W, Luo D, Feng W. Synthesis and photoinduced birefringence of novel azobenzene chromophore-containing polymer. REACT FUNCT POLYM 2006. [DOI: 10.1016/j.reactfunctpolym.2005.12.004] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
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Carreño MC, García I, Ribagorda M, Merino E, Pieraccini S, Spada GP. Enantiopure Sulfinyl Azobenzenes as Chiroptical Switches. Org Lett 2005; 7:2869-72. [PMID: 15987157 DOI: 10.1021/ol050789o] [Citation(s) in RCA: 18] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
[reaction: see text] Photoswitchable enantiopure sulfinyl azo compounds have been synthesized. A remarkable perturbation of the azo system by the stereogenic sulfinyl moiety has been observed by CD in both the trans and the cis azobenzenes resulting by photoisomerization. After five irradiation cycles, the configurational integrity of these chiral switches remains unchanged.
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Affiliation(s)
- M Carmen Carreño
- Departamento de Química Orgánica (C-I), Universidad Autónoma de Madrid, Cantoblanco, Spain.
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49
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Srinivas O, Mitra N, Surolia A, Jayaraman N. Photoswitchable cluster glycosides as tools to probe carbohydrate-protein interactions: synthesis and lectin-binding studies of azobenzene containing multivalent sugar ligands. Glycobiology 2005; 15:861-73. [PMID: 15872151 DOI: 10.1093/glycob/cwi069] [Citation(s) in RCA: 41] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
Synthetic cluster glycosides have often been used to unravel mechanisms of carbohydrate-protein interactions. Although synthetic cluster glycosides are constituted on scaffolds to achieve high avidities in lectin binding, there have been no known attempts to modulate the orientations of the sugar clusters with the aid of a functional scaffold onto which the sugar units are linked. Herein, we describe synthesis, physical, and lectin-binding studies of a series of alpha-D-mannopyranoside and beta-D-galactopyranosyl-(1-->4)-beta-D-glucopyranoside glycoclusters that are attached to a photoswitchable azobenzenoid core. These glycoclusters were synthesized by the amidation of amine-tethered glycopyranosides with azobenzene carbonyl chlorides. From kinetic studies, the cis forms of the azobenzene-glycopyranoside derivative were found to be more stable in aqueous solutions than in organic solvents. Molecular modeling studies were performed to estimate the relative geometries of the photoswitchable glycoclusters in the trans- and cis-isomeric forms. Isothermal titration calorimetry (ITC) was employed to assess the binding of these glycoclusters to lectins peanut agglutinin (PNA) and concanavalin A (Con A). Although binding affinities were enhanced several orders higher as the valency of the sugar was increased, a biphasic-binding profile in ITC plots was observed during few glycoclusters lectin-binding processes. The biphasic-binding profile indicates a "cooperativity" in the binding process. An important outcome of this study is that in addition to inherent clustering of the sugar units as a molecular feature, an induced clustering emanates because of the isomerization of the trans form of the azobenzene scaffold to the cis-isomeric form.
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Affiliation(s)
- Oruganti Srinivas
- Molecular Biophysics Unit, Indian Institute of Science, Bangalore 560 012, Karnataka, India
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Inoue D, Suzuki M, Shirai H, Hanabusa K. Novel Low-Molecular-Weight Gelators Based on Azobenzene Containing L-Amino Acids. BULLETIN OF THE CHEMICAL SOCIETY OF JAPAN 2005. [DOI: 10.1246/bcsj.78.721] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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