1
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Satpathy JK, Yadav R, Bagha UK, Kumar D, Sastri CV, de Visser SP. Enhanced Reactivity through Equatorial Sulfur Coordination in Nonheme Iron(IV)-Oxo Complexes: Insights from Experiment and Theory. Inorg Chem 2024; 63:6752-6766. [PMID: 38551622 DOI: 10.1021/acs.inorgchem.4c00070] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/16/2024]
Abstract
Sulfur ligation in metalloenzymes often gives the active site unique properties, whether it is the axial cysteinate ligand in the cytochrome P450s or the equatorial sulfur/thiol ligation in nonheme iron enzymes. To understand sulfur ligation to iron complexes and how it affects the structural, spectroscopic, and intrinsic properties of the active species and the catalysis of substrates, we pursued a systematic study and compared sulfur with amine-ligated iron(IV)-oxo complexes. We synthesized and characterized a biomimetic N4S-ligated iron(IV)-oxo complex and compared the obtained results with an analogous N5-ligated iron(IV)-oxo complex. Our work shows that the amine for sulfur replacement in the equatorial ligand framework leads to a rate enhancement for oxygen atom and hydrogen atom transfer reactions. Moreover, the sulfur-ligated iron(IV)-oxo complex reacts through a different reaction mechanism as compared to the N5-ligated iron(IV)-oxo complex, where the former reacts through hydride transfer with the latter reacting via radical pathways. We show that the reactivity differences are caused by a dramatic change in redox potential between the two complexes. Our studies highlight the importance of implementing a sulfur ligand into the equatorial ligand framework of nonheme iron(IV)-oxo complexes and how it affects the physicochemical properties of the oxidant and its reactivity.
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Affiliation(s)
- Jagnyesh K Satpathy
- Department of Chemistry, Indian Institute of Technology, Guwahati 781039, Assam, India
| | - Rolly Yadav
- Department of Chemistry, Indian Institute of Technology, Guwahati 781039, Assam, India
| | - Umesh K Bagha
- Department of Chemistry, Indian Institute of Technology, Guwahati 781039, Assam, India
| | - Devesh Kumar
- Department of Applied Physics, Babasaheb Bhimrao Ambedkar University, School for Physical Sciences, Vidya Vihar, Rae Bareilly Road, Lucknow 226025, UP, India
| | - Chivukula V Sastri
- Department of Chemistry, Indian Institute of Technology, Guwahati 781039, Assam, India
| | - Sam P de Visser
- Department of Chemistry, Indian Institute of Technology, Guwahati 781039, Assam, India
- The Manchester Institute of Biotechnology and Department of Chemical Engineering, The University of Manchester, 131 Princess Street, Manchester M1 7DN, United Kingdom
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2
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Ekanger LA, Shah RK, Porowski ME, Ziolkowski Z, Calello A. Spectroscopic, electrochemical, and kinetic trends in Fe(III)-thiolate disproportionation near physiologic pH. J Biol Inorg Chem 2024; 29:291-301. [PMID: 38722396 PMCID: PMC11111527 DOI: 10.1007/s00775-024-02051-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2023] [Accepted: 02/01/2024] [Indexed: 05/24/2024]
Abstract
In addition to its primary oxygen-atom-transfer function, cysteamine dioxygenase (ADO) exhibits a relatively understudied anaerobic disproportionation reaction (ADO-Fe(III)-SR → ADO-Fe(II) + ½ RSSR) with its native substrates. Inspired by ADO disproportionation reactivity, we employ [Fe(tacn)Cl3] (tacn = 1,4,7-triazacyclononane) as a precursor for generating Fe(III)-thiolate model complexes in buffered aqueous media. A series of Fe(III)-thiolate model complexes are generated in situ using aqueous [Fe(tacn)Cl3] and thiol-containing ligands cysteamine, penicillamine, mercaptopropionate, cysteine, cysteine methyl ester, N-acetylcysteine, and N-acetylcysteine methyl ester. We observe trends in UV-Vis and electron paramagnetic resonance (EPR) spectra, disproportionation rate constants, and cathodic peak potentials as a function of thiol ligand. These trends will be useful in rationalizing substrate-dependent Fe(III)-thiolate disproportionation reactions in metalloenzymes.
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Affiliation(s)
- Levi A Ekanger
- Department of Chemistry, The College of New Jersey, Ewing, NJ, 08628, USA.
| | - Ruhi K Shah
- Department of Chemistry, The College of New Jersey, Ewing, NJ, 08628, USA
| | - Matthew E Porowski
- Department of Chemistry, The College of New Jersey, Ewing, NJ, 08628, USA
| | - Zach Ziolkowski
- Department of Chemistry, The College of New Jersey, Ewing, NJ, 08628, USA
| | - Alana Calello
- Department of Chemistry, The College of New Jersey, Ewing, NJ, 08628, USA
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3
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Yadav S, Yadav V, Siegler MA, Moënne-Loccoz P, Jameson GNL, Goldberg DP. A Nonheme Iron(III) Superoxide Complex Leads to Sulfur Oxygenation. J Am Chem Soc 2024; 146:7915-7921. [PMID: 38488295 DOI: 10.1021/jacs.3c12337] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/28/2024]
Abstract
A new alkylthiolate-ligated nonheme iron complex, FeII(BNPAMe2S)Br (1), is reported. Reaction of 1 with O2 at -40 °C, or reaction of the ferric form with O2•- at -80 °C, gives a rare iron(III)-superoxide intermediate, [FeIII(O2)(BNPAMe2S)]+ (2), characterized by UV-vis, 57Fe Mössbauer, ATR-FTIR, EPR, and CSIMS. Metastable 2 then converts to an S-oxygenated FeII(sulfinate) product via a sequential O atom transfer mechanism involving an iron-sulfenate intermediate. These results provide evidence for the feasibility of proposed intermediates in thiol dioxygenases.
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Affiliation(s)
- Sudha Yadav
- Department of Chemistry, The Johns Hopkins University, 3400 North Charles Street, Baltimore, Maryland 21218, United States
| | - Vishal Yadav
- Department of Chemistry, The Johns Hopkins University, 3400 North Charles Street, Baltimore, Maryland 21218, United States
| | - Maxime A Siegler
- Department of Chemistry, The Johns Hopkins University, 3400 North Charles Street, Baltimore, Maryland 21218, United States
| | - Pierre Moënne-Loccoz
- Department of Chemical Physiology and Biochemistry, Oregon Health & Science University, Portland, Oregon 97239, United States
| | - Guy N L Jameson
- School of Chemistry, Bio21 Molecular Science and Biotechnology Institute, The University of Melbourne, 30 Flemington Road,Parkville, Victoria 3010, Australia
| | - David P Goldberg
- Department of Chemistry, The Johns Hopkins University, 3400 North Charles Street, Baltimore, Maryland 21218, United States
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4
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Fan F, Zhao L, Zeng Q, Zhang L, Zhang X, Wang T, Fu Y. Self-Catalysis Transformation of Metal-Organic Coordination Polymers. ACS APPLIED MATERIALS & INTERFACES 2023. [PMID: 37473422 DOI: 10.1021/acsami.3c07521] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 07/22/2023]
Abstract
Designing a multidimensional transformation of metal-organic coordination polymers (MOPs) is highly attractive yet very challenging. Herein, by combining the dynamicity of the coordination bond with the controllability of the chemical reaction, the concept of self-catalysis transformation of MOPs is first proposed. It uses the metal in MOPs as the catalyst to catalyze the chemical reaction of the ligand in the frameworks, simultaneously changing the coordination environment of the metal and the structure of the ligand, resulting in the controllable multidimensional transformation in the morphology and structure of MOPs. The self-catalysis transformation of MOPs can be triggered by heat or light, and crystals with various morphologies and structures can be obtained. Significantly, because the self-catalysis reaction is constraint in the framework, the products at different transformation processes are relatively stable. Monitoring and characterizing the transformation of MOPs give evidences for the exploration of the self-catalysis reaction, and a plausible transformation mechanism is proposed and proved. It can be foreseen that this novel self-catalysis transformation strategy might open up a new direction for the diverse development of MOPs and provide a powerful tool for the study of organic reaction mechanism.
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Affiliation(s)
- Fuqiang Fan
- Department of Chemistry, College of Sciences, Northeastern University, Shenyang 110819, P. R. China
| | - Lin Zhao
- Department of Chemistry, College of Sciences, Northeastern University, Shenyang 110819, P. R. China
| | - Qingqi Zeng
- Department of Chemistry, College of Sciences, Northeastern University, Shenyang 110819, P. R. China
| | - Liying Zhang
- Department of Chemistry, College of Sciences, Northeastern University, Shenyang 110819, P. R. China
| | - Xuemin Zhang
- Department of Chemistry, College of Sciences, Northeastern University, Shenyang 110819, P. R. China
| | - Tieqiang Wang
- Department of Chemistry, College of Sciences, Northeastern University, Shenyang 110819, P. R. China
| | - Yu Fu
- Department of Chemistry, College of Sciences, Northeastern University, Shenyang 110819, P. R. China
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5
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Johnee Britto N, Jaccob M, Comba P, Anandababu K, Mayilmurugan R. DFT insights into the mechanism of O 2 activation catalyzed by a structural and functional model of cysteine dioxygenase with tris(2-pyridyl)methane-based ligand architecture. J Inorg Biochem 2023; 238:112066. [PMID: 36370503 DOI: 10.1016/j.jinorgbio.2022.112066] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/27/2022] [Revised: 10/26/2022] [Accepted: 11/03/2022] [Indexed: 11/07/2022]
Abstract
Cysteine dioxygenation is an important step in the metabolism of toxic L-cysteine (Cys) in the human body, carried out by cysteine dioxygenase enzyme (CDO). The disruption of this process is found to elicit neurological health issues. This work reports a computational investigation of mechanistic aspects of this reaction, using a recently reported tris(2-pyridyl)methane-based biomimetic model complex of CDO. The computed results indicate that, the initial SO2 bond formation process is the slowest step in the S-dioxygenation process, possessing an activation barrier of 12.7 kcal/mol. The remaining steps were found to be downhill requiring very small activation energies. The transition states were found to undergo spin crossover between triplet and quintet states, while the singlet surface remained unstable throughout the entire reaction. In essence, the mechanistic scheme and multistate reactivity pattern together with the relatively small computed rate-limiting activation barrier as well as the exothermic formation energy demonstrate that the model complex is an efficient biomimetic CDO model. In addition, the study also substantiates the involvement of Fe(IV)oxido intermediates in the mechanism of S-dioxygenation by the chosen model complex. The insights derived from the O2 activation process might pave way for development of more accurate CDO model catalysts that might be capable of even more efficiently mimicking the geometric, spectroscopic and functional features of the CDO enzyme.
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Affiliation(s)
- Neethinathan Johnee Britto
- Department of Chemistry & Computational Chemistry Laboratory, Loyola Institute of Frontier Energy (LIFE), Loyola College, University of Madras, Chennai 600 034, Tamil Nadu, India
| | - Madhavan Jaccob
- Department of Chemistry & Computational Chemistry Laboratory, Loyola Institute of Frontier Energy (LIFE), Loyola College, University of Madras, Chennai 600 034, Tamil Nadu, India.
| | - Peter Comba
- Heidelberg University, Anorganisch-Chemisches Institut and Interdisciplinary Center for Scientific Computing, Im Neuenheimer Feld 270, 69120 Heidelberg, Germany.
| | - Karunanithi Anandababu
- Depatment of Chemistry, Indian Institute of Technology Bhilai, GEC Campus, Sejbahar, Raipur 492015, India
| | - Ramasamy Mayilmurugan
- Depatment of Chemistry, Indian Institute of Technology Bhilai, GEC Campus, Sejbahar, Raipur 492015, India
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6
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Xu S, Yang D, Wang B, Chen Y, Ye S, Qu J. Generation of a Sulfinamide Species from Facile N-O Bond Cleavage of Nitrosobenzene by a Thiolate-Bridged Diiron Complex. J Am Chem Soc 2021; 143:17374-17387. [PMID: 34617736 DOI: 10.1021/jacs.1c03542] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
Abstract
The activation of nitrosobenzene promoted by transition-metal complexes has gained considerable interest due to its significance for understanding biological processes and catalytic C-N bond formation processes. Despite intensive studies in the past decades, there are only limited cases where electron-rich metal centers were commonly employed to achieve the N-O or C-N bond cleavage of the coordinated nitrosobenzene. In this regard, it is significant and challenging to construct a suitable functional system for examining its unique reactivity toward reductive activation of nitrosoarene. Herein, we present a {Fe2S2} functional platform that can activate nitrosobenzene via an unprecedented iron-directed thiolate insertion into the N-O bond to selectively generate a well-defined diiron benzenesulfinamide complex. Furthermore, computational studies support a proposal that in this concerted four-electron reduction process of nitrosobenzene the iron center serves as an important electron shuttle. Notably, compared to the intact bridging nitrosoarene ligand, the benzenesulfinamide moiety has priority to convert into aniline in the presence of separate or combined protons and reductants, which may imply the formation of the sulfinamide species accelerates reduction process of nitrosoarene. The reaction pattern presented here represents a novel activation mode of nitrosobenzene realized by a thiolate-bridged diiron complex.
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Affiliation(s)
- Sunlin Xu
- State Key Laboratory of Fine Chemicals, Dalian University of Technology, Dalian 116024, P.R. China
| | - Dawei Yang
- State Key Laboratory of Fine Chemicals, Dalian University of Technology, Dalian 116024, P.R. China
| | - Baomin Wang
- State Key Laboratory of Fine Chemicals, Dalian University of Technology, Dalian 116024, P.R. China
| | - Yifeng Chen
- State Key Laboratory of Bioreactor Engineering, Shanghai Collaborative Innovation Centre for Biomanufacturing, Frontiers Science Center for Materiobiology and Dynamic Chemistry, East China University of Science and Technology, Shanghai 200237, P.R. China.,School of Chemistry and Molecular Engineering, East China University of Science and Technology, Shanghai 200237, P.R. China
| | - Shengfa Ye
- State Key Laboratory of Catalysis, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, P.R. China
| | - Jingping Qu
- State Key Laboratory of Fine Chemicals, Dalian University of Technology, Dalian 116024, P.R. China.,State Key Laboratory of Bioreactor Engineering, Shanghai Collaborative Innovation Centre for Biomanufacturing, Frontiers Science Center for Materiobiology and Dynamic Chemistry, East China University of Science and Technology, Shanghai 200237, P.R. China
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7
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Ekanayake DM, Pham D, Probst AL, Miller JR, Popescu CV, Fiedler AT. Electronic structures and spectroscopic signatures of diiron intermediates generated by O 2 activation of nonheme iron(II)-thiolate complexes. Dalton Trans 2021; 50:14432-14443. [PMID: 34570147 PMCID: PMC8721859 DOI: 10.1039/d1dt02286e] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Abstract
The activation of O2 at thiolate-ligated iron(II) sites is essential to the function of numerous metalloenzymes and synthetic catalysts. Iron-thiolate bonds in the active sites of nonheme iron enzymes arise from either coordination of an endogenous cysteinate residue or binding of a deprotonated thiol-containing substrate. Examples of the latter include sulfoxide synthases, such as EgtB and OvoA, that utilize O2 to catalyze tandem S-C bond formation and S-oxygenation steps in thiohistidine biosyntheses. We recently reported the preparation of two mononuclear nonheme iron-thiolate complexes (1 and 2) that serve as structural active-site models of substrate-bound EgtB and OvoA (Dalton Trans. 2020, 49, 17745-17757). These models feature monodentate thiolate ligands and tripodal N4 ligands with mixed pyridyl/imidazolyl donors. Here, we describe the reactivity of 1 and 2 with O2 at low temperatures to give metastable intermediates (3 and 4, respectively). Characterization with multiple spectroscopic techniques (UV-vis absorption, NMR, variable-field and -temperature Mössbauer, and resonance Raman) revealed that these intermediates are thiolate-ligated iron(III) dimers with a bridging oxo ligand derived from the four-electron reduction of O2. Structural models of 3 and 4 consistent with the experimental data were generated via density functional theory (DFT) calculations. The combined experimental and computational results illuminate the geometric and electronic origins of the unique spectral features of diiron(III)-μ-oxo complexes with thiolate ligands, and the spectroscopic signatures of 3 and 4 are compared to those of closely-related diiron(III)-μ-peroxo species. Collectively, these results will assist in the identification of intermediates that appear on the O2 reaction landscapes of iron-thiolate species in both biological and synthetic environments.
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Affiliation(s)
| | - Dao Pham
- Department of Chemistry, The College of Arts and Sciences, University of St. Thomas, St. Paul, Minnesota 55105, USA.
| | - Andrew L Probst
- Department of Chemistry, The College of Arts and Sciences, University of St. Thomas, St. Paul, Minnesota 55105, USA.
| | - Joshua R Miller
- Department of Chemistry, University of Wisconsin - Madison, Madison, Wisconsin 53706, USA
| | - Codrina V Popescu
- Department of Chemistry, The College of Arts and Sciences, University of St. Thomas, St. Paul, Minnesota 55105, USA.
| | - Adam T Fiedler
- Department of Chemistry, Marquette University, Milwaukee, Wisconsin 53233, USA.
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8
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Lin S, He C. Development of Nonheme {FeNO} 7 Complexes Based on the Pyrococcus furiosus Rubredoxin for Red-Light-Controllable Nitric Oxide Release. Inorg Chem 2021; 60:14364-14370. [PMID: 34503329 DOI: 10.1021/acs.inorgchem.1c02089] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Nitric oxide (NO) is an essential biological messenger, contributing a significant role in a diverse range of physiological processes. The light-controllable NO releasers are of great interest because of their potential as agents for NO-related research and therapeutics. Herein, we developed a pair of red-light-controllable NO releasers, pfRd-C9A-{FeNO}7 and pfRd-C42A-{FeNO}7 (pfRd = Pyrococcus furiosus rubredoxin), by constructing a nonheme {FeNO}7 center within the redesigned iron-sulfur protein scaffolds. While shown to be both air and thermally stable, these complexes are highly sensitive to red-light irradiation with temporal precision, which was confirmed by electron paramagnetic resonance spin trapping and Griess assay. The temporally controlled NO release from these complexes was also demonstrated in DNA cleavage assay. Overall, this study demonstrates that such a protein-based nonheme iron nitrosyl system could be a viable chemical tool for precise NO administration.
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Affiliation(s)
- Shaomin Lin
- School of Chemistry and Chemical Engineering, South China University of Technology, Guangzhou 510640, China
| | - Chunmao He
- School of Chemistry and Chemical Engineering, South China University of Technology, Guangzhou 510640, China
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9
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Börner M, Fuhrmann D, Klose J, Krautscheid H, Kersting B. Ethereal Hydroperoxides: Powerful Reagents for S-Oxygenation of Bridging Thiophenolate Functions. Inorg Chem 2021; 60:13517-13527. [PMID: 34415154 DOI: 10.1021/acs.inorgchem.1c01854] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
S-Oxygenation of thiophenolate bridges by ethereal hydroperoxides was studied. [NiII2LS(PhCO2)]+ (1), where LS = macrocyclic aminethiolate supporting ligand, is S-oxygenated readily in a mixed methanol/acetonitrile solution with ether/dioxygen at room temperature in the presence of daylight. The reactions were found to depend strongly on the choice of the ether. Uptake of two O atoms occurs in dioxane to give a mixed thiolate/sulfinate complex [NiII2LSO2(PhCO2)]+ (2) containing the rare five-membered Ni(μ1,1-S)(μ1,2-OS)Ni core. In tetrahydrofuran, four O atoms are taken up by 1 to generate the bis(sulfinate) species [NiII2LSO4(PhCO2)]+ (3). A mono-S-oxygenated sulfenate intermediate can be detected by electrospray ionization mass spectrometry. The oxygenation reactions proceed in high yields without complex disintegration and invariably provide μ1,2-bridging sulfinates as established by spectroscopy (IR and UV/vis), X-ray crystallography, and accompanying density functional theory calculations. The oxygenation of the S atoms has a strong impact on the electronic structures of the nickel complexes. The monosulfinate complex 2 has an S = 2 ground state resulting from moderate ferromagnetic exchange coupling interactions (J = +15.7 cm-1; H = -2JS1S2), while an antiferromagnetic exchange interaction in 3 shows the presence of a ground state with spin S = 0 (J = -0.56 cm-1).
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Affiliation(s)
- Martin Börner
- Institut für Anorganische Chemie, Universität Leipzig, Johannisallee 29, 04103 Leipzig, Germany.,Leibniz-Institut für Oberflächenmodifizierung, Abteilung Funktionale Oberflächen, Permoserstrasse 15, D-04318 Leipzig, Germany
| | - Daniel Fuhrmann
- Institut für Anorganische Chemie, Universität Leipzig, Johannisallee 29, 04103 Leipzig, Germany
| | - Jennifer Klose
- Institut für Anorganische Chemie, Universität Leipzig, Johannisallee 29, 04103 Leipzig, Germany
| | - Harald Krautscheid
- Institut für Anorganische Chemie, Universität Leipzig, Johannisallee 29, 04103 Leipzig, Germany
| | - Berthold Kersting
- Institut für Anorganische Chemie, Universität Leipzig, Johannisallee 29, 04103 Leipzig, Germany
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10
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Albkuri YM, Ovens JS, Martin J, Baker RT. Nickel(II)-SNS Thiolate Complexes: Reactivity and Solution Dynamics. Inorg Chem 2021; 60:10934-10942. [PMID: 34242000 DOI: 10.1021/acs.inorgchem.1c00446] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
Abstract
Nickel coordination chemistry with a biomimetic thiolate-imine-thioether SNSMe ligand is accompanied by diverse reactivity and multidentate ligand dynamics. Reaction of Ni(acac)2 with 2 equiv of 2-(methylthio)-phenyl-benzothiazolidine (MPB) affords the bis(arylimino-phenylene-thiolate) complex Ni(κ2-SNSMe)2 (1; acac = acetylacetonate). Thermolysis of 1 in refluxing toluene is accompanied by imine C-C bond formation, yielding [Ni(N2S2)] (2) with a redox-active ligand. Protonation of 1 with NHTf2 at a low temperature released 1 equiv of MPB, yielding crystals of the dimeric dication {[Ni(μ-κ3-SNSMe)]2}(NTf2)2 (3; Tf = SO2CF3) in high yield. In contrast, the same reaction at room temperature gave also paramagnetic complexes {Ni[μ-Ni(κ3-SNSMe)2]2}(NTf2)2 (4) and {Ni[μ-Ni(κ3-SNSMe)2]3}(NTf2)2 (5) that feature coordination of two or three pseudo-octahedral, paramagnetic Ni(κ3-SNSMe)2 units to a central Ni(II) dication via thiolate bridges. Remarkably, dissolution of 3 in a variety of solvents, including weakly coordinating CH2Cl2, rapidly generates a mixture of 4 and Ni(NTf)2. Treatment of this mixture with Lewis bases L gave high yields of dimers {[Ni(μ-κ3-SNSMe)L]2}(NTf2)2 for L = CNXylyl (6a) and {[Ni(μ-κ3-SNSMe)]2(μ-dmpm)}(NTf2)2 (6b; dmpm = bis(dimethylphosphino)methane) or monomers [Ni(κ3-SNSMe)L](NTf2) for L = PMe3 (7a) and P(OMe)3 (7b). Addition of 2 equiv of the strong donor N-heterocyclic carbene ligand, IPr, to 3, however, led to thioether demethylation, affording neutral dithiolate complex Ni(κ3-SNS)(IPr) (8). Reaction products were characterized by NMR and mass spectrometry and complexes 1-5, 6a, 6b, 7a, and 8 by single-crystal X-ray diffraction.
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Affiliation(s)
- Yahya M Albkuri
- Department of Chemistry and Biomolecular Sciences and Centre for Catalysis Research and Innovation, University of Ottawa, Ottawa, Ontario K1N 6N5, Canada
| | - Jeffrey S Ovens
- Faculty of Science, University of Ottawa, Ottawa, Ontario K1N 6N5, Canada
| | - Jessica Martin
- Department of Chemistry and Biomolecular Sciences and Centre for Catalysis Research and Innovation, University of Ottawa, Ottawa, Ontario K1N 6N5, Canada
| | - R Tom Baker
- Department of Chemistry and Biomolecular Sciences and Centre for Catalysis Research and Innovation, University of Ottawa, Ottawa, Ontario K1N 6N5, Canada
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11
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Dedushko MA, Pikul JH, Kovacs JA. Superoxide Oxidation by a Thiolate-Ligated Iron Complex and Anion Inhibition. Inorg Chem 2021; 60:7250-7261. [PMID: 33900756 DOI: 10.1021/acs.inorgchem.1c00336] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Superoxide (O2•-) is a toxic radical, generated via the adventitious reduction of dioxygen (O2), which has been implicated in a number of human disease states. Nonheme iron enzymes, superoxide reductase (SOR) and superoxide dismutase (SOD), detoxify O2•- via reduction to afford H2O2 and disproportionation to afford O2 and H2O2, respectively. The former contains a thiolate in the coordination sphere, which has been proposed to prevent O2•- oxidation to O2. The work described herein shows that, in contrast to this, oxidized thiolate-ligated [FeIII(SMe2N4(tren)(THF)]2+ (1ox-THF) is capable of oxidizing O2•- to O2. Coordinating anions, Cl- and OAc-, are shown to inhibit dioxygen evolution, implicating an inner-sphere mechanism. Previously we showed that the reduced thiolate-ligated [FeII(SMe2N4(tren))]+ (1) is capable of reducing O2•- via a proton-dependent inner-sphere mechanism involving a transient Fe(III)-OOH intermediate. A transient ferric-superoxo intermediate, [FeIII(SMe2N4(tren))(O2)]+ (3), is detected by electronic absorption spectroscopy at -130 °C in the reaction between 1ox-THF and KO2 and shown to evolve O2 upon slight warming to -115 °C. The DFT calculated O-O (1.306 Å) and Fe-O (1.943 Å) bond lengths of 3 are typical of ferric-superoxo complexes, and the time-dependent DFT calculated electronic absorption spectrum of 3 reproduces the experimental spectrum. The electronic structure of 3 is shown to consist of two antiferromagnetically coupled (Jcalc = -180 cm-1) unpaired electrons, one in a superoxo π*(O-O) orbital and the other in an antibonding π*(Fe(dyz)-S(py)) orbital.
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Affiliation(s)
- Maksym A Dedushko
- The Department of Chemistry, University of Washington: Box 351700, Seattle, Washington 98195-1700, United States
| | - Jessica H Pikul
- The Department of Chemistry, University of Washington: Box 351700, Seattle, Washington 98195-1700, United States
| | - Julie A Kovacs
- The Department of Chemistry, University of Washington: Box 351700, Seattle, Washington 98195-1700, United States
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12
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Gordon JB, McGale JP, Siegler MA, Goldberg DP. Proton-Coupled Electron-Transfer Reactivity Controls Iron versus Sulfur Oxidation in Nonheme Iron-Thiolate Complexes. Inorg Chem 2021; 60:6255-6265. [PMID: 33872005 DOI: 10.1021/acs.inorgchem.0c03779] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Reaction of the five-coordinate FeII(N4S) complexes, [FeII(iPr3TACN)(abtX)](OTf) (abt = aminobenzenethiolate, X = H, CF3), with a one-electron oxidant and an appropriate base leads to net H atom loss, generating new FeIII(iminobenzenethiolate) complexes that were characterized by single-crystal X-ray diffraction (XRD), as well as UV-vis, EPR, and Mössbauer spectroscopies. The spectroscopic data indicate that the iminobenzenethiolate complexes have S = 3/2 ground states. In the absence of a base, oxidation of the FeII(abt) complexes leads to disulfide formation instead of oxidation at the metal center. Bracketing studies with separated proton-coupled electron-transfer (PCET) reagents show that the FeII(aminobenzenethiolate) and FeIII(iminobenzenethiolate) forms are readily interconvertible by H+/e- transfer and provide a measure of the bond dissociation free energy (BDFE) for the coordinated N-H bond between 64 and 69 kcal mol-1. This work shows that coordination to the iron center causes a dramatic weakening of the N-H bond and that Fe- versus S-oxidation in a nonheme iron complex can be controlled by the protonation state of an ancillary amino donor.
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Affiliation(s)
- Jesse B Gordon
- Department of Chemistry, The Johns Hopkins University, 3400 North Charles Street, Baltimore, Maryland 21218, United States
| | - Jeremy P McGale
- Department of Chemistry, The Johns Hopkins University, 3400 North Charles Street, Baltimore, Maryland 21218, United States
| | - Maxime A Siegler
- Department of Chemistry, The Johns Hopkins University, 3400 North Charles Street, Baltimore, Maryland 21218, United States
| | - David P Goldberg
- Department of Chemistry, The Johns Hopkins University, 3400 North Charles Street, Baltimore, Maryland 21218, United States
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13
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Müller L, Hoof S, Keck M, Herwig C, Limberg C. Enhancing Tris(pyrazolyl)borate-Based Models of Cysteine/Cysteamine Dioxygenases through Steric Effects: Increased Reactivities, Full Product Characterization and Hints to Initial Superoxide Formation. Chemistry 2020; 26:11851-11861. [PMID: 32432367 PMCID: PMC7540079 DOI: 10.1002/chem.202001818] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/15/2020] [Indexed: 02/03/2023]
Abstract
The design of biomimetic model complexes for the cysteine dioxygenase (CDO) and cysteamine dioxygenase (ADO) is reported, where the 3-His coordination of the iron ion is simulated by three pyrazole donors of a trispyrazolyl borate ligand (Tp) and protected cysteine and cysteamine represent substrate ligands. It is found that the replacement of phenyl groups-attached at the 3-positions of the pyrazole units in a previous model-by mesityl residues has massive consequences, as the latter arrange to a more spacious reaction pocket. Thus, the reaction with O2 proceeds much faster and afterwards the first structural characterization of an iron(II) η2 -O,O-sulfinate product became possible. If one of the three Tp-mesityl groups is placed in the 5-position, an even larger reaction pocket results, which leads to yet faster rates and accumulation of a reaction intermediate at low temperatures, as shown by UV/Vis and Mössbauer spectroscopy. After comparison with the results of investigations on the cobalt analogues this intermediate is tentatively assigned to an iron(III) superoxide species.
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Affiliation(s)
- Lars Müller
- Institut für Chemie, Humboldt-Universität zu Berlin, Brook-Taylor-Straße 2, 12489, Berlin, Germany
| | - Santina Hoof
- Institut für Chemie, Humboldt-Universität zu Berlin, Brook-Taylor-Straße 2, 12489, Berlin, Germany
| | - Matthias Keck
- Institut für Chemie, Humboldt-Universität zu Berlin, Brook-Taylor-Straße 2, 12489, Berlin, Germany
| | - Christian Herwig
- Institut für Chemie, Humboldt-Universität zu Berlin, Brook-Taylor-Straße 2, 12489, Berlin, Germany
| | - Christian Limberg
- Institut für Chemie, Humboldt-Universität zu Berlin, Brook-Taylor-Straße 2, 12489, Berlin, Germany
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14
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Wang L, Gennari M, Cantú Reinhard FG, Padamati SK, Philouze C, Flot D, Demeshko S, Browne WR, Meyer F, de Visser SP, Duboc C. O2 Activation by Non-Heme Thiolate-Based Dinuclear Fe Complexes. Inorg Chem 2020; 59:3249-3259. [DOI: 10.1021/acs.inorgchem.9b03633] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2023]
Affiliation(s)
- Lianke Wang
- Institutes of Physical Science and Information Technology, Anhui University, 230601 Hefei, Anhui, P. R. China
- Univ. Grenoble Alpes, CNRS UMR 5250, DCM, F-38000 Grenoble, France
| | - Marcello Gennari
- Univ. Grenoble Alpes, CNRS UMR 5250, DCM, F-38000 Grenoble, France
| | - Fabián G. Cantú Reinhard
- Manchester Institute of Biotechnology and Department of Chemical Engineering and Analytical Science, The University of Manchester, 131 Princess Street, Manchester M1 7DN, United Kingdom
| | - Sandeep K. Padamati
- Univ. Grenoble Alpes, CNRS UMR 5250, DCM, F-38000 Grenoble, France
- Molecular Inorganic Chemistry, Stratingh Institute for Chemistry, Faculty of Science and Engineering, University of Groningen, Nijenborgh 4, 9747AG Groningen, The Netherlands
| | | | - David Flot
- ESRF European Synchrotron 71, Ave Martyrs Grenoble, 38000 Grenoble, France
| | - Serhiy Demeshko
- Institute of Inorganic Chemistry, University of Göttingen, Tammannstrasse 4, D-37077 Göttingen, Germany
| | - Wesley R. Browne
- Molecular Inorganic Chemistry, Stratingh Institute for Chemistry, Faculty of Science and Engineering, University of Groningen, Nijenborgh 4, 9747AG Groningen, The Netherlands
| | - Franc Meyer
- Institute of Inorganic Chemistry, University of Göttingen, Tammannstrasse 4, D-37077 Göttingen, Germany
| | - Sam P. de Visser
- Manchester Institute of Biotechnology and Department of Chemical Engineering and Analytical Science, The University of Manchester, 131 Princess Street, Manchester M1 7DN, United Kingdom
| | - Carole Duboc
- Univ. Grenoble Alpes, CNRS UMR 5250, DCM, F-38000 Grenoble, France
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15
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Mukherjee G, Reinhard FGC, Bagha UK, Sastri CV, de Visser SP. Sluggish reactivity by a nonheme iron(iv)-tosylimido complex as compared to its oxo analogue. Dalton Trans 2020; 49:5921-5931. [DOI: 10.1039/d0dt00018c] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A comparative spectroscopic and computational study of reactivity between ferryl-tosylimido and ferryl-oxo complexes of two biomimetic model systems. The Fe(iv)-tosylimido complex was found to be sluggish in comparison to its fellow oxo counterpart.
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Affiliation(s)
- Gourab Mukherjee
- Department of Chemistry
- Indian Institute of Technology Guwahati
- India
| | - Fabián G. Cantú Reinhard
- The Manchester Institute of Biotechnology and Department of Chemical Engineering and Analytical Science
- The University of Manchester
- Manchester M1 7DN
- UK
| | | | | | - Sam P. de Visser
- The Manchester Institute of Biotechnology and Department of Chemical Engineering and Analytical Science
- The University of Manchester
- Manchester M1 7DN
- UK
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16
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Fischer AA, Miller JR, Jodts RJ, Ekanayake DM, Lindeman SV, Brunold TC, Fiedler AT. Spectroscopic and Computational Comparisons of Thiolate-Ligated Ferric Nonheme Complexes to Cysteine Dioxygenase: Second-Sphere Effects on Substrate (Analogue) Positioning. Inorg Chem 2019; 58:16487-16499. [PMID: 31789510 DOI: 10.1021/acs.inorgchem.9b02432] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Parallel spectroscopic and computational studies of iron(III) cysteine dioxygenase (CDO) and synthetic models are presented. The synthetic complexes utilize the ligand tris(4,5-diphenyl-1-methylimidazol-2-yl)phosphine (Ph2TIP), which mimics the facial three-histidine triad of CDO and other thiol dioxygenases. In addition to the previously reported [FeII(CysOEt)(Ph2TIP)]BPh4 (1; CysOEt is the ethyl ester of anionic l-cysteine), the formation and crystallographic characterization of [FeII(2-MTS)(Ph2TIP)]BPh4 (2) is reported, where the methyl 2-thiosalicylate anion (2-MTS) resembles the substrate of 3-mercaptopropionate dioxygenase (MDO). One-electron chemical oxidation of 1 and 2 yields ferric species that bind cyanide and azide anions, which have been used as spectroscopic probes of O2 binding in prior studies of FeIII-CDO. The six-coordinate FeIII-CN and FeIII-N3 adducts are examined with UV-vis absorption, electron paramagnetic resonance (EPR), and resonance Raman (rRaman) spectroscopies. In addition, UV-vis and rRaman studies of cysteine- and cyanide-bound FeIII-CDO are reported for both the wild-type (WT) enzyme and C93G variant, which lacks the Cys-Tyr cross-link that is present in the second coordination sphere of the WT active site. Density functional theory (DFT) and ab initio calculations are employed to provide geometric and electronic structure descriptions of the synthetic and enzymatic FeIII adducts. In particular, it is shown that the complete active space self-consistent field (CASSCF) method, in tandem with n-electron valence state second-order perturbation theory (NEVPT2), is capable of elucidating the structural basis of subtle shifts in EPR g values for low-spin FeIII species.
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Affiliation(s)
- Anne A Fischer
- Department of Chemistry , Marquette University , Milwaukee , Wisconsin 53201 , United States
| | - Joshua R Miller
- Department of Chemistry , University of Wisconsin-Madison , Madison , Wisconsin 53706 , United States
| | - Richard J Jodts
- Department of Chemistry , University of Wisconsin-Madison , Madison , Wisconsin 53706 , United States
| | - Danushka M Ekanayake
- Department of Chemistry , Marquette University , Milwaukee , Wisconsin 53201 , United States
| | - Sergey V Lindeman
- Department of Chemistry , Marquette University , Milwaukee , Wisconsin 53201 , United States
| | - Thomas C Brunold
- Department of Chemistry , University of Wisconsin-Madison , Madison , Wisconsin 53706 , United States
| | - Adam T Fiedler
- Department of Chemistry , Marquette University , Milwaukee , Wisconsin 53201 , United States
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17
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Gordon JB, Vilbert AC, DiMucci IM, MacMillan SN, Lancaster KM, Moënne-Loccoz P, Goldberg DP. Activation of Dioxygen by a Mononuclear Nonheme Iron Complex: Sequential Peroxo, Oxo, and Hydroxo Intermediates. J Am Chem Soc 2019; 141:17533-17547. [PMID: 31647656 DOI: 10.1021/jacs.9b05274] [Citation(s) in RCA: 33] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The activation of dioxygen by FeII(Me3TACN)(S2SiMe2) (1) is reported. Reaction of 1 with O2 at -135 °C in 2-MeTHF generates a thiolate-ligated (peroxo)diiron complex FeIII2(O2)(Me3TACN)2(S2SiMe2)2 (2) that was characterized by UV-vis (λmax = 300, 390, 530, 723 nm), Mössbauer (δ = 0.53, |ΔEQ| = 0.76 mm s-1), resonance Raman (RR) (ν(O-O) = 849 cm-1), and X-ray absorption (XAS) spectroscopies. Complex 2 is distinct from the outer-sphere oxidation product 1ox (UV-vis (λmax = 435, 520, 600 nm), Mössbauer (δ = 0.45, |ΔEQ| = 3.6 mm s-1), and EPR (S = 5/2, g = [6.38, 5.53, 1.99])), obtained by one-electron oxidation of 1. Cleavage of the peroxo O-O bond can be initiated either photochemically or thermally to produce a new species assigned as an FeIV(O) complex, FeIV(O)(Me3TACN)(S2SiMe2) (3), which was identified by UV-vis (λmax = 385, 460, 890 nm), Mössbauer (δ = 0.21, |ΔEQ| = 1.57 mm s-1), RR (ν(FeIV═O) = 735 cm-1), and X-ray absorption spectroscopies, as well as reactivity patterns. Reaction of 3 at low temperature with H atom donors gives a new species, FeIII(OH)(Me3TACN)(S2SiMe2) (4). Complex 4 was independently synthesized from 1 by the stoichiometric addition of a one-electron oxidant and a hydroxide source. This work provides a rare example of dioxygen activation at a mononuclear nonheme iron(II) complex that produces both FeIII-O-O-FeIII and FeIV(O) species in the same reaction with O2. It also demonstrates the feasibility of forming Fe/O2 intermediates with strongly donating sulfur ligands while avoiding immediate sulfur oxidation.
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Affiliation(s)
- Jesse B Gordon
- Department of Chemistry , The Johns Hopkins University , 3400 North Charles Street , Baltimore , Maryland 21218 , United States
| | - Avery C Vilbert
- Department of Chemistry and Chemical Biology, Baker Laboratory , Cornell University , Ithaca , New York 14853 , United States
| | - Ida M DiMucci
- Department of Chemistry and Chemical Biology, Baker Laboratory , Cornell University , Ithaca , New York 14853 , United States
| | - Samantha N MacMillan
- Department of Chemistry and Chemical Biology, Baker Laboratory , Cornell University , Ithaca , New York 14853 , United States
| | - Kyle M Lancaster
- Department of Chemistry and Chemical Biology, Baker Laboratory , Cornell University , Ithaca , New York 14853 , United States
| | - Pierre Moënne-Loccoz
- Department of Chemical Physiology and Biochemistry , Oregon Health & Science University , Portland , Oregon 97239 , United States
| | - David P Goldberg
- Department of Chemistry , The Johns Hopkins University , 3400 North Charles Street , Baltimore , Maryland 21218 , United States
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18
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Elsby MR, Ghostine K, Das UK, Gabidullin BM, Baker RT. Iron-SNS and -CNS Complexes: Selective Caryl–S Bond Cleavage and Amine-Borane Dehydrogenation Catalysis. Organometallics 2019. [DOI: 10.1021/acs.organomet.9b00524] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
Affiliation(s)
- Matthew R. Elsby
- Department of Chemistry and Biomolecular Sciences and Centre for Catalysis Research and Innovation, University of Ottawa, Ottawa, Ontario K1N 6N5, Canada
| | - Karine Ghostine
- Department of Chemistry and Biomolecular Sciences and Centre for Catalysis Research and Innovation, University of Ottawa, Ottawa, Ontario K1N 6N5, Canada
| | - Uttam K. Das
- Department of Chemistry and Biomolecular Sciences and Centre for Catalysis Research and Innovation, University of Ottawa, Ottawa, Ontario K1N 6N5, Canada
| | | | - R. Tom Baker
- Department of Chemistry and Biomolecular Sciences and Centre for Catalysis Research and Innovation, University of Ottawa, Ottawa, Ontario K1N 6N5, Canada
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19
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Anandababu K, Ramasubramanian R, Wadepohl H, Comba P, Johnee Britto N, Jaccob M, Mayilmurugan R. A Structural and Functional Model for the Tris-Histidine Motif in Cysteine Dioxygenase. Chemistry 2019; 25:9540-9547. [PMID: 31090109 DOI: 10.1002/chem.201901005] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/06/2019] [Revised: 04/23/2019] [Indexed: 01/14/2023]
Abstract
The iron(II) complexes [Fe(L)(MeCN)3 ](SO3 CF3 )2 (L are two derivatives of tris(2-pyridyl)-based ligands) have been synthesized as models for cysteine dioxygenase (CDO). The molecular structure of one of the complexes exhibits octahedral coordination geometry and the Fe-Npy bond lengths [1.953(4)-1.972(4) Å] are similar to those in the Cys-bound FeII -CDO; Fe-NHis : 1.893-2.199 Å. The iron(II) centers of the model complexes exhibit relatively high FeIII/II redox potentials (E1/2 =0.988-1.380 V vs. ferrocene/ferrocenium electrode, Fc/Fc+ ), within the range for O2 activation and typical for the corresponding nonheme iron enzymes. The reaction of in situ generated [Fe(L)(MeCN)(SPh)]+ with excess O2 in acetonitrile (MeCN) yields selectively the doubly oxygenated phenylsulfinic acid product. Isotopic labeling studies using 18 O2 confirm the incorporation of both oxygen atoms of O2 into the product. Kinetic and preliminary DFT studies reveal the involvement of an FeIII peroxido intermediate with a rhombic S= 1 / 2 FeIII center (687-696 nm; g≈2.46-2.48, 2.13-2.15, 1.92-1.94), similar to the spectroscopic signature of the low-spin Cys-bound FeIII CDO (650 nm, g≈2.47, 2.29, 1.90). The proposed FeIII peroxido intermediates have been trapped, and the O-O stretching frequencies are in the expected range (approximately 920 and 820 cm-1 for the alkyl- and hydroperoxido species, respectively). The model complexes have a structure similar to that of the enzyme and structural aspects as well as the reactivity are discussed.
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Affiliation(s)
- Karunanithi Anandababu
- Bioinorganic Chemistry Laboratory/Physical Chemistry, School of Chemistry, Madurai Kamaraj University, Madurai, 625021, India
| | - Ramamoorthy Ramasubramanian
- Bioinorganic Chemistry Laboratory/Physical Chemistry, School of Chemistry, Madurai Kamaraj University, Madurai, 625021, India
| | - Hubert Wadepohl
- Anorganisch-Chemisches Institut and Interdisciplinary Center for Scientific Computing, Universität Heidelberg, Im Neuenheimer Feld 270, 69120, Heidelberg, Germany
| | - Peter Comba
- Anorganisch-Chemisches Institut and Interdisciplinary Center for Scientific Computing, Universität Heidelberg, Im Neuenheimer Feld 270, 69120, Heidelberg, Germany
| | | | - Madhavan Jaccob
- Department of Chemistry, Loyola College, Chennai, 600034, India
| | - Ramasamy Mayilmurugan
- Bioinorganic Chemistry Laboratory/Physical Chemistry, School of Chemistry, Madurai Kamaraj University, Madurai, 625021, India
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20
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Yadav V, Gordon JB, Siegler MA, Goldberg DP. Dioxygen-Derived Nonheme Mononuclear Fe III(OH) Complex and Its Reactivity with Carbon Radicals. J Am Chem Soc 2019; 141:10148-10153. [PMID: 31244183 DOI: 10.1021/jacs.9b03329] [Citation(s) in RCA: 25] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Abstract
A new tetradentate, monoanionic, mixed N/O donor ligand (BNPAPh2O-) with second coordination sphere H-bonding groups has been synthesized for stabilization of a terminal FeIII(OH) complex. The complex FeII(BNPAPh2O)(OTf) (1) reacts with O2 to give a mononuclear terminal FeIII(OH) complex, FeIII(OH)(BNPAPh2O)(OTf) (2), both of which were characterized by X-ray diffraction, electrospray ionization mass spectrometry, UV-vis, 1H and 19F nuclear magnetic resonance, 57Fe Mössbauer, and electron paramagnetic resonance spectroscopies. Treatment of 2 with carbon radicals (Ar3C·) gives Ar3COH and the FeII complex 1, in direct analogy with the elusive radical "rebound" process proposed for nonheme iron enzymes.
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Affiliation(s)
- Vishal Yadav
- Department of Chemistry , The Johns Hopkins University , Baltimore , Maryland 21218 , United States
| | - Jesse B Gordon
- Department of Chemistry , The Johns Hopkins University , Baltimore , Maryland 21218 , United States
| | - Maxime A Siegler
- Department of Chemistry , The Johns Hopkins University , Baltimore , Maryland 21218 , United States
| | - David P Goldberg
- Department of Chemistry , The Johns Hopkins University , Baltimore , Maryland 21218 , United States
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21
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Confer AM, Vilbert AC, Dey A, Lancaster KM, Goldberg DP. A Mononuclear, Nonheme Fe II-Piloty's Acid (PhSO 2NHOH) Adduct: An Intermediate in the Production of {FeNO} 7/8 Complexes from Piloty's Acid. J Am Chem Soc 2019; 141:7046-7055. [PMID: 30994347 DOI: 10.1021/jacs.9b01700] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
Reaction of the mononuclear nonheme complex [FeII(CH3CN)(N3PyS)]BF4 (1) with an HNO donor, Piloty's acid (PhSO2NHOH, P.A.), at low temperature affords a high-spin ( S = 2) FeII-P.A. intermediate (2), characterized by 57Fe Mössbauer and Fe K-edge X-ray absorption (XAS) spectroscopies, with interpretation of both supported by DFT calculations. The combined methods indicate that P.A. anion binds as the N-deprotonated tautomer (PhSO2NOH-) to [FeII(N3PyS)]+, leading to 2. Complex 2 is the first spectroscopically characterized example, to our knowledge, of P.A. anion bound to a redox-active metal center. Warming of 2 above -60 °C yields the stable {FeNO}7 complex [Fe(NO)(N3PyS)]BF4 (4), as evidenced by 1H NMR, ATR-IR, and Mössbauer spectroscopies. Isotope labeling experiments with 15N-labeled P.A. confirm that the nitrosyl ligand in 4 derives from P.A. In contrast, addition of a second equivalent of a strong base leads to S-N cleavage and production of an {FeNO}8 species, the deprotonated analog of an Fe-HNO complex. This work has implications for the targeted delivery of HNO/NO-/NO· to nonheme Fe centers in biological and synthetic applications, and suggests a new role for nonheme FeII complexes in the assisted degradation of HNO donor molecules.
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Affiliation(s)
- Alex M Confer
- Department of Chemistry , The Johns Hopkins University , Baltimore , Maryland 21218 , United States
| | - Avery C Vilbert
- Baker Laboratory, Department of Chemistry and Chemical Biology , Cornell University , Ithaca , New York 14853 , United States
| | - Aniruddha Dey
- Department of Chemistry , The Johns Hopkins University , Baltimore , Maryland 21218 , United States
| | - Kyle M Lancaster
- Baker Laboratory, Department of Chemistry and Chemical Biology , Cornell University , Ithaca , New York 14853 , United States
| | - David P Goldberg
- Department of Chemistry , The Johns Hopkins University , Baltimore , Maryland 21218 , United States
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22
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Wang L, Gennari M, Cantú Reinhard FG, Gutiérrez J, Morozan A, Philouze C, Demeshko S, Artero V, Meyer F, de Visser SP, Duboc C. A Non-Heme Diiron Complex for (Electro)catalytic Reduction of Dioxygen: Tuning the Selectivity through Electron Delivery. J Am Chem Soc 2019; 141:8244-8253. [DOI: 10.1021/jacs.9b02011] [Citation(s) in RCA: 27] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
Affiliation(s)
- Lianke Wang
- Université Grenoble Alpes, CNRS UMR 5250, DCM, F-38000 Grenoble, France
| | - Marcello Gennari
- Université Grenoble Alpes, CNRS UMR 5250, DCM, F-38000 Grenoble, France
| | - Fabián G. Cantú Reinhard
- Manchester Institute of Biotechnology and School of Chemical Engineering and Analytical Science, The University of Manchester, 131 Princess Street, Manchester M1 7DN, United Kingdom
| | - Javier Gutiérrez
- Université Grenoble Alpes, CNRS UMR 5250, DCM, F-38000 Grenoble, France
| | - Adina Morozan
- Université Grenoble Alpes, CNRS, CEA, Laboratoire de Chimie et
Biologie des Métaux, F-38000 Grenoble, France
| | | | - Serhiy Demeshko
- Institut für Anorganische Chemie, Universität Göttingen, Tammannstrasse 4, D-37077 Göttingen, Germany
| | - Vincent Artero
- Université Grenoble Alpes, CNRS, CEA, Laboratoire de Chimie et
Biologie des Métaux, F-38000 Grenoble, France
| | - Franc Meyer
- Institut für Anorganische Chemie, Universität Göttingen, Tammannstrasse 4, D-37077 Göttingen, Germany
| | - Sam P. de Visser
- Manchester Institute of Biotechnology and School of Chemical Engineering and Analytical Science, The University of Manchester, 131 Princess Street, Manchester M1 7DN, United Kingdom
| | - Carole Duboc
- Université Grenoble Alpes, CNRS UMR 5250, DCM, F-38000 Grenoble, France
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23
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Mukherjee G, Alili A, Barman P, Kumar D, Sastri CV, de Visser SP. Interplay Between Steric and Electronic Effects: A Joint Spectroscopy and Computational Study of Nonheme Iron(IV)-Oxo Complexes. Chemistry 2019; 25:5086-5098. [PMID: 30720909 DOI: 10.1002/chem.201806430] [Citation(s) in RCA: 37] [Impact Index Per Article: 7.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/29/2018] [Indexed: 01/05/2023]
Abstract
Iron is an essential element in nonheme enzymes that plays a crucial role in many vital oxidative transformations and metabolic reactions in the human body. Many of those reactions are regio- and stereospecific and it is believed that the selectivity is guided by second-coordination sphere effects in the protein. Here, results are shown of a few engineered biomimetic ligand frameworks based on the N4Py (N,N-bis(2-pyridylmethyl)-N-bis(2-pyridyl)methylamine) scaffold and the second-coordination sphere effects are studied. For the first time, selective substitutions in the ligand framework have been shown to tune the catalytic properties of the iron(IV)-oxo complexes by regulating the steric and electronic factors. In particular, a better positioning of the oxidant and substrate in the rate-determining transition state lowers the reaction barriers. Therefore, an optimum balance between steric and electronic factors mediates the ideal positioning of oxidant and substrate in the rate-determining transition state that affects the reactivity of high-valent reaction intermediates.
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Affiliation(s)
- Gourab Mukherjee
- Department of Chemistry, Indian Institute of Technology Guwahati, Guwahati, 781039, Assam, India
| | - Aligulu Alili
- The Manchester Institute of Biotechnology and School of Chemical, Engineering and Analytical Science, The University of Manchester, 131 Princess Street, Manchester, M1 7DN, UK
| | - Prasenjit Barman
- Department of Chemistry, Indian Institute of Technology Guwahati, Guwahati, 781039, Assam, India
| | - Devesh Kumar
- Department of Applied Physics, Babasaheb Bhimrao Ambedkar University, School for Physical Sciences, Vidya Vihar, Rae Bareilly Road, Lucknow, 226025, UP, India
| | - Chivukula V Sastri
- Department of Chemistry, Indian Institute of Technology Guwahati, Guwahati, 781039, Assam, India
| | - Sam P de Visser
- The Manchester Institute of Biotechnology and School of Chemical, Engineering and Analytical Science, The University of Manchester, 131 Princess Street, Manchester, M1 7DN, UK
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24
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Gordon JB, Vilbert AC, Siegler MA, Lancaster KM, Moënne-Loccoz P, Goldberg DP. A Nonheme Thiolate-Ligated Cobalt Superoxo Complex: Synthesis and Spectroscopic Characterization, Computational Studies, and Hydrogen Atom Abstraction Reactivity. J Am Chem Soc 2019; 141:3641-3653. [PMID: 30776222 DOI: 10.1021/jacs.8b13134] [Citation(s) in RCA: 26] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Abstract
The synthesis and characterization of a Co(II) dithiolato complex Co(Me3TACN)(S2SiMe2) (1) are reported. Reaction of 1 with O2 generates a rare thiolate-ligated cobalt-superoxo species Co(O2)(Me3TACN)(S2SiMe2) (2) that was characterized spectroscopically and structurally by resonance Raman, EPR, and X-ray absorption spectroscopies as well as density functional theory. Metal-superoxo species are proposed to S-oxygenate metal-bound thiolate donors in nonheme thiol dioxygenases, but 2 does not lead to S-oxygenation of the intramolecular thiolate donors and does not react with exogenous sulfur donors. However, complex 2 is capable of oxidizing the O-H bonds of 2,2,6,6-tetramethylpiperidin-1-ol derivatives via H atom abstraction. Complementary proton-coupled electron-transfer reactivity is seen for 2 with separated proton/reductant pairs. The reactivity studies indicate that 2 can abstract H atoms from weak X-H bonds with bond dissociation free energy (BDFE) ≤ 70 kcal mol-1. DFT calculations predict that the putative Co(OOH) product has an O-H BDFE = 67 kcal mol-1, which matches the observed pattern of reactivity seen for 2. These data provide new information regarding the selectivity of S-oxygenation versus H atom abstraction in thiolate-ligated nonheme metalloenzymes that react with O2.
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Affiliation(s)
- Jesse B Gordon
- Department of Chemistry , The Johns Hopkins University , 3400 North Charles Street , Baltimore , Maryland 21218 , United States
| | - Avery C Vilbert
- Department of Chemistry and Chemical Biology, Baker Laboratory , Cornell University , Ithaca , New York 14853 , United States
| | - Maxime A Siegler
- Department of Chemistry , The Johns Hopkins University , 3400 North Charles Street , Baltimore , Maryland 21218 , United States
| | - Kyle M Lancaster
- Department of Chemistry and Chemical Biology, Baker Laboratory , Cornell University , Ithaca , New York 14853 , United States
| | - Pierre Moënne-Loccoz
- Department of Biochemistry & Molecular Biology , Oregon Health & Science University , Portland , Oregon 97239-3098 , United States
| | - David P Goldberg
- Department of Chemistry , The Johns Hopkins University , 3400 North Charles Street , Baltimore , Maryland 21218 , United States
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25
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Hsieh CC, Liu YC, Tseng MC, Chiang MH, Horng YC. Dioxygen activation by a dinuclear thiolate-ligated Fe(ii) complex. Dalton Trans 2019; 48:379-386. [PMID: 30516213 DOI: 10.1039/c8dt04491k] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
Abstract
Dioxygen activation by FeII thiolate complexes is relatively rare in biological and chemical systems because the sulfur site is at least as vulnerable as the iron site to oxidative modification. O2 activation by FeII-SR complexes with thiolate bound trans to the O2 binding site generally affords the FeIV[double bond, length as m-dash]O intermediate and oxidized thiolate. On the other hand, O2 activation by Fe(ii)-SR complexes with thiolate bound cis to the O2 binding site generates FeIII-O-FeIII or S-oxygenated complexes. The postulated FeIV[double bond, length as m-dash]O intermediate has only been identified in isopenicillin N synthase recently. We demonstrated here that O2 activation by a dinuclear FeII thiolate-rich complex produces a mononuclear FeIII complex and water with a supply of electron donors. The thiolate is bound cis to the postulated dioxygen binding site, and no FeIII-O-FeIII or S-oxygenated complex was observed. Although we have not detected the transient intermediate by spectroscopic measurements, the FeIV[double bond, length as m-dash]O intermediate is suggested to exist by theoretical calculation, and P-oxidation and hydride-transfer experiments. In addition, an unprecedented FeIII-O2-FeIII complex supported by thiolates was observed during the reaction by using a coldspray ionization time-of-flight mass (CSI-TOF MS) instrument. This is also supported by low-temperature UV-vis measurements. The intramolecular NHO[double bond, length as m-dash]FeIV hydrogen bonding, calculated by DFT, probably fine tunes the O2-activation process for intramolecular hydrogen abstraction, avoiding the S-oxygenation at cis-thiolate.
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Affiliation(s)
- Chang-Chih Hsieh
- Department of Chemistry, National Changhua University of Education, Changhua 50058, Taiwan.
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26
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Jiang F, Siegler MA, Bouwman E. The Reactivity of Fe
II
and Co
II
Disulfide Compounds with Dihydrogen Peroxide. Eur J Inorg Chem 2018. [DOI: 10.1002/ejic.201800962] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Feng Jiang
- Leiden Institute of Chemistry Gorlaeus Laboratories Leiden University P.O. Box 9502 2300 RA Leiden The Netherlands
| | - Maxime A. Siegler
- Department of Chemistry Gorlaeus Laboratories Johns Hopkins University 3400 N. Charles Street 21218 Baltimore Maryland United States
| | - Elisabeth Bouwman
- Leiden Institute of Chemistry Gorlaeus Laboratories Leiden University P.O. Box 9502 2300 RA Leiden The Netherlands
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27
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Gordon JB, McGale JP, Prendergast JR, Shirani-Sarmazeh Z, Siegler MA, Jameson GNL, Goldberg DP. Structures, Spectroscopic Properties, and Dioxygen Reactivity of 5- and 6-Coordinate Nonheme Iron(II) Complexes: A Combined Enzyme/Model Study of Thiol Dioxygenases. J Am Chem Soc 2018; 140:14807-14822. [PMID: 30346746 PMCID: PMC6596423 DOI: 10.1021/jacs.8b08349] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Abstract
The synthesis of four new FeII(N4S(thiolate)) complexes as models of the thiol dioxygenases are described. They are composed of derivatives of the neutral, tridentate ligand triazacyclononane (R3TACN; R = Me, iPr) and 2-aminobenzenethiolate (abtx; X = H, CF3), a non-native substrate for thiol dioxygenases. The coordination number of these complexes depends on the identity of the TACN derivative, giving 6-coordinate (6-coord) complexes for FeII(Me3TACN)(abtx)(OTf) (1: X = H; 2: X = CF3) and 5-coordinate (5-coord) complexes for [FeII(iPr3TACN)(abtx)](OTf) (3: X = H; 4: X = CF3). Complexes 1-4 were examined by UV-vis, 1H/19F NMR, and Mössbauer spectroscopies, and density functional theory (DFT) calculations were employed to support the data. Mössbauer spectroscopy reveals that the 6-coord 1-2 and 5-coord 3- 4 exhibit distinct spectra, and these data are compared with that for cysteine-bound CDO, helping to clarify the coordination environment of the cys-bound FeII active site. Reaction of 1 or 2 with O2 at -95 °C leads to S-oxygenation of the abt ligand, and in the case of 2, a rare di(sulfinato)-bridged complex, [Fe2III(μ-O)((2-NH2) p-CF3C6H3SO2)2](OTf)2 ( 5), was obtained. Parallel enzymatic studies on the CDO variant C93G were carried out with the abt substrate and show that reaction with O2 leads to disulfide formation, as opposed to S-oxygenation. The combined model and enzyme studies show that the thiol dioxygenases can operate via a 6-coord FeII center, in contrast to the accepted mechanism for nonheme iron dioxygenases, and that proper substrate chelation to Fe appears to be critical for S-oxygenation.
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Affiliation(s)
- Jesse B Gordon
- Department of Chemistry , The Johns Hopkins University , 3400 North Charles Street , Baltimore , Maryland 21218 , United States
- School of Chemistry , Bio21 Molecular Science and Biotechnology Institute, The University of Melbourne , 30 Flemington Road , Parkville , Victoria 3010 , Australia
| | - Jeremy P McGale
- Department of Chemistry , The Johns Hopkins University , 3400 North Charles Street , Baltimore , Maryland 21218 , United States
- School of Chemistry , Bio21 Molecular Science and Biotechnology Institute, The University of Melbourne , 30 Flemington Road , Parkville , Victoria 3010 , Australia
| | - Joshua R Prendergast
- Department of Chemistry , The Johns Hopkins University , 3400 North Charles Street , Baltimore , Maryland 21218 , United States
- School of Chemistry , Bio21 Molecular Science and Biotechnology Institute, The University of Melbourne , 30 Flemington Road , Parkville , Victoria 3010 , Australia
| | - Zahra Shirani-Sarmazeh
- Department of Chemistry , The Johns Hopkins University , 3400 North Charles Street , Baltimore , Maryland 21218 , United States
- School of Chemistry , Bio21 Molecular Science and Biotechnology Institute, The University of Melbourne , 30 Flemington Road , Parkville , Victoria 3010 , Australia
| | - Maxime A Siegler
- Department of Chemistry , The Johns Hopkins University , 3400 North Charles Street , Baltimore , Maryland 21218 , United States
- School of Chemistry , Bio21 Molecular Science and Biotechnology Institute, The University of Melbourne , 30 Flemington Road , Parkville , Victoria 3010 , Australia
| | - Guy N L Jameson
- Department of Chemistry , The Johns Hopkins University , 3400 North Charles Street , Baltimore , Maryland 21218 , United States
- School of Chemistry , Bio21 Molecular Science and Biotechnology Institute, The University of Melbourne , 30 Flemington Road , Parkville , Victoria 3010 , Australia
| | - David P Goldberg
- Department of Chemistry , The Johns Hopkins University , 3400 North Charles Street , Baltimore , Maryland 21218 , United States
- School of Chemistry , Bio21 Molecular Science and Biotechnology Institute, The University of Melbourne , 30 Flemington Road , Parkville , Victoria 3010 , Australia
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28
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Nebbali K, Mekuimemba CD, Charles C, Yefsah S, Chastanet G, Mota AJ, Colacio E, Triki S. One-Dimensional Thiocyanato-Bridged Fe(II) Spin Crossover Cooperative Polymer With Unusual FeN 5S Coordination Sphere. Inorg Chem 2018; 57:12338-12346. [PMID: 30207469 DOI: 10.1021/acs.inorgchem.8b02061] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
We present here a novel example of spin crossover phenomenon on a Fe(II) one-dimensional chain with unusual N5S coordination sphere. The [{Fe(tpc-OMe)(NCS)(μ-NCS)} n] (1) compound was prepared using the tridentate tpc-OMe ligand (tpc-OMe = tris(2-pyridyl)methoxymethane), FeCl2·4H2O, and the KSCN salt. Crystallographic investigations revealed that the Fe(II) ions are connected by a single bridging NCS- ligand (μ-κN:κS-SCN coordination mode) to afford a zigzag neutral chain running along the [010] direction, in which the thiocyanato bridging groups adopt a cis head-to-tail configuration. The (N5S) metal environment arises from one thiocyanato-κS and two thiocyanato-κN ligands and from three pyridine of the fac-tpc-OMe tripodal ligand. This compound presents a unique extension of Fe(II) binuclear complexes into linear chains built on similar tripodal ligands and bridging thiocyanate anions. Compound 1 shows a spin crossover (SCO) behavior which has been evidenced by magnetic, calorimetric, and structural investigations, revealing a sharp cooperative spin transition with a transition temperature of ca. 199 K. Temperature scan rate studies revealed a very narrow hysteresis loop (∼1 K wide). Photoswitching of this compound was also performed, evidencing a very fast relaxation process at low temperature. Among other factors, the linearity of the N-bound terminal thiocyanato ligand appears as the main structural characteristic at the origin of the presence of the SCO transition in compound 1 and in the two others Fe(II) previous systems involving thiocyanato-bridges and tripodal tris(2-pyridyl)methane ligands.
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Affiliation(s)
- Kahina Nebbali
- UMR-CNRS 6521 , University de Brest (UBO) , 6 Av. V. Le Gorgeu , C.S. 93837, F-29238, Brest CEDEX 3 , France.,Faculté des Sciences , Université Mouloud Mammeri , Tizi-Ouzou 15000 , Algérie
| | - Cle Donacier Mekuimemba
- UMR-CNRS 6521 , University de Brest (UBO) , 6 Av. V. Le Gorgeu , C.S. 93837, F-29238, Brest CEDEX 3 , France
| | - Catherine Charles
- UMR-CNRS 6521 , University de Brest (UBO) , 6 Av. V. Le Gorgeu , C.S. 93837, F-29238, Brest CEDEX 3 , France
| | - Said Yefsah
- Faculté des Sciences , Université Mouloud Mammeri , Tizi-Ouzou 15000 , Algérie
| | - Guillaume Chastanet
- Institut de Chimie de la Matière Condensée de Bordeaux , Universite de Bordeaux́ , 87 Av. Doc. A. Schweitzer , F-33608 Pessac , France
| | - Antonio J Mota
- Departamento de Química Inorgánica, Facultad de Ciencias , Universidad de Granada , Av. Fuentenueva S/N , 18071 Granada , Spain
| | - Enrique Colacio
- Departamento de Química Inorgánica, Facultad de Ciencias , Universidad de Granada , Av. Fuentenueva S/N , 18071 Granada , Spain
| | - Smail Triki
- UMR-CNRS 6521 , University de Brest (UBO) , 6 Av. V. Le Gorgeu , C.S. 93837, F-29238, Brest CEDEX 3 , France
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29
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Pangia TM, Davies CG, Prendergast JR, Gordon JB, Siegler MA, Jameson GNL, Goldberg DP. Observation of Radical Rebound in a Mononuclear Nonheme Iron Model Complex. J Am Chem Soc 2018; 140:4191-4194. [PMID: 29537258 PMCID: PMC6047074 DOI: 10.1021/jacs.7b12707] [Citation(s) in RCA: 28] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
A nonheme iron(III) terminal methoxide complex, [FeIII(N3PyO2Ph)(OCH3)]ClO4, was synthesized. Reaction of this complex with the triphenylmethyl radical (Ph3C•) leads to formation of Ph3COCH3 and the one-electron-reduced iron(II) center, as seen by UV-vis, EPR, 1H NMR, and Mössbauer spectroscopy. These results indicate that homolytic Fe-O bond cleavage occurs together with C-O bond formation, providing a direct observation of the "radical rebound" process proposed for both biological and synthetic nonheme iron centers.
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Affiliation(s)
- Thomas M. Pangia
- Department of Chemistry, The Johns Hopkins University, Baltimore Maryland, 21218
| | - Casey G. Davies
- Department of Chemistry and MacDiarmid Institute for Advanced Materials and Nanotechnology, University of Otago, P.O. Box 56, Dunedin 9054, New Zealand
| | - Joshua R. Prendergast
- Department of Chemistry and MacDiarmid Institute for Advanced Materials and Nanotechnology, University of Otago, P.O. Box 56, Dunedin 9054, New Zealand
- School of Chemistry, Bio21 Molecular Science and Biotechnology Institute, The University of Melbourne, 30 Flemington Road, Parkville, Victoria 3010, Australia
| | - Jesse B. Gordon
- Department of Chemistry, The Johns Hopkins University, Baltimore Maryland, 21218
| | - Maxime A. Siegler
- Department of Chemistry, The Johns Hopkins University, Baltimore Maryland, 21218
| | - Guy N. L. Jameson
- Department of Chemistry and MacDiarmid Institute for Advanced Materials and Nanotechnology, University of Otago, P.O. Box 56, Dunedin 9054, New Zealand
- School of Chemistry, Bio21 Molecular Science and Biotechnology Institute, The University of Melbourne, 30 Flemington Road, Parkville, Victoria 3010, Australia
| | - David P. Goldberg
- Department of Chemistry, The Johns Hopkins University, Baltimore Maryland, 21218
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30
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Jana M, Majumdar A. C–S Bond Cleavage, Redox Reactions, and Dioxygen Activation by Nonheme Dicobalt(II) Complexes. Inorg Chem 2017; 57:617-632. [DOI: 10.1021/acs.inorgchem.7b02432] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Manish Jana
- Department of Inorganic Chemistry, Indian Association for the Cultivation of Science, 2A & 2B Raja S. C. Mullick Road, Jadavpur, Kolkata 700032, India
| | - Amit Majumdar
- Department of Inorganic Chemistry, Indian Association for the Cultivation of Science, 2A & 2B Raja S. C. Mullick Road, Jadavpur, Kolkata 700032, India
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31
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Rigid scaffolds for the design of molecular catalysts and biomimetic active sites: A case study of anthracene-based ligands for modeling mono-iron hydrogenase (Hmd). Coord Chem Rev 2017. [DOI: 10.1016/j.ccr.2017.09.022] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
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32
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Confer AM, McQuilken AC, Matsumura H, Moënne-Loccoz P, Goldberg DP. A Nonheme, High-Spin {FeNO} 8 Complex that Spontaneously Generates N 2O. J Am Chem Soc 2017; 139:10621-10624. [PMID: 28749673 DOI: 10.1021/jacs.7b05549] [Citation(s) in RCA: 33] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
One-electron reduction of [Fe(NO)-(N3PyS)]BF4 (1) leads to the production of the metastable nonheme {FeNO}8 complex, [Fe(NO)(N3PyS)] (3). Complex 3 is a rare example of a high-spin (S = 1) {FeNO}8 and is the first example, to our knowledge, of a mononuclear nonheme {FeNO}8 species that generates N2O. A second, novel route to 3 involves addition of Piloty's acid, an HNO donor, to an FeII precursor. This work provides possible new insights regarding the mechanism of nitric oxide reductases.
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Affiliation(s)
- Alex M Confer
- Department of Chemistry, Johns Hopkins University , Baltimore, Maryland 21218, United States
| | - Alison C McQuilken
- Department of Chemistry, Johns Hopkins University , Baltimore, Maryland 21218, United States
| | - Hirotoshi Matsumura
- Institute of Environmental Health, Oregon Health & Science University , Portland, Oregon 97239, United States
| | - Pierre Moënne-Loccoz
- Institute of Environmental Health, Oregon Health & Science University , Portland, Oregon 97239, United States
| | - David P Goldberg
- Department of Chemistry, Johns Hopkins University , Baltimore, Maryland 21218, United States
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33
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Fischer AA, Lindeman SV, Fiedler AT. Spectroscopic and computational studies of reversible O2 binding by a cobalt complex of relevance to cysteine dioxygenase. Dalton Trans 2017; 46:13229-13241. [DOI: 10.1039/c7dt01600j] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
Abstract
Spectroscopic and computational studies of reversible O2 binding by a cobalt active-site mimic shed light on the catalytic mechanism of cysteine dioxygenases.
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34
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Liu LL, Zhu D, Cao LL, Stephan DW. N-Heterocyclic carbene stabilized parent sulfenyl, selenenyl, and tellurenyl cations (XH+, X = S, Se, Te). Dalton Trans 2017; 46:3095-3099. [DOI: 10.1039/c7dt00186j] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
Abstract
NHC-stabilized parent sulfenyl (H–S+), selenenyl (H–Se+) and tellurenyl (H–Te+) cations have been achieved by treatment of NHC chalcogen adducts with trifluoromethanesulfonic acid.
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Affiliation(s)
- Liu Leo Liu
- Department of Chemistry
- University of Toronto
- Toronto
- Canada M5S 3H6
| | - Diya Zhu
- Department of Chemistry
- University of Toronto
- Toronto
- Canada M5S 3H6
| | - Levy L. Cao
- Department of Chemistry
- University of Toronto
- Toronto
- Canada M5S 3H6
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35
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Villar-Acevedo G, Lugo-Mas P, Blakely MN, Rees JA, Ganas AS, Hanada EM, Kaminsky W, Kovacs JA. Metal-Assisted Oxo Atom Addition to an Fe(III) Thiolate. J Am Chem Soc 2016; 139:119-129. [PMID: 28033001 DOI: 10.1021/jacs.6b03512] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Abstract
Cysteinate oxygenation is intimately tied to the function of both cysteine dioxygenases (CDOs) and nitrile hydratases (NHases), and yet the mechanisms by which sulfurs are oxidized by these enzymes are unknown, in part because intermediates have yet to be observed. Herein, we report a five-coordinate bis-thiolate ligated Fe(III) complex, [FeIII(S2Me2N3(Pr,Pr))]+ (2), that reacts with oxo atom donors (PhIO, IBX-ester, and H2O2) to afford a rare example of a singly oxygenated sulfenate, [FeIII(η2-SMe2O)(SMe2)N3(Pr,Pr)]+ (5), resembling both a proposed intermediate in the CDO catalytic cycle and the essential NHase Fe-S(O)Cys114 proposed to be intimately involved in nitrile hydrolysis. Comparison of the reactivity of 2 with that of a more electron-rich, crystallographically characterized derivative, [FeIIIS2Me2NMeN2amide(Pr,Pr)]- (8), shows that oxo atom donor reactivity correlates with the metal ion's ability to bind exogenous ligands. Density functional theory calculations suggest that the mechanism of S-oxygenation does not proceed via direct attack at the thiolate sulfurs; the average spin-density on the thiolate sulfurs is approximately the same for 2 and 8, and Mulliken charges on the sulfurs of 8 are roughly twice those of 2, implying that 8 should be more susceptible to sulfur oxidation. Carboxamide-ligated 8 is shown to be unreactive towards oxo atom donors, in contrast to imine-ligated 2. Azide (N3-) is shown to inhibit sulfur oxidation with 2, and a green intermediate is observed, which then slowly converts to sulfenate-ligated 5. This suggests that the mechanism of sulfur oxidation involves initial coordination of the oxo atom donor to the metal ion. Whether the green intermediate is an oxo atom donor adduct, Fe-O═I-Ph, or an Fe(V)═O remains to be determined.
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Affiliation(s)
- Gloria Villar-Acevedo
- The Department of Chemistry, University of Washington , Box 351700, Seattle, Washington 98195-1700, United States
| | - Priscilla Lugo-Mas
- The Department of Chemistry, University of Washington , Box 351700, Seattle, Washington 98195-1700, United States
| | - Maike N Blakely
- The Department of Chemistry, University of Washington , Box 351700, Seattle, Washington 98195-1700, United States
| | - Julian A Rees
- The Department of Chemistry, University of Washington , Box 351700, Seattle, Washington 98195-1700, United States
| | - Abbie S Ganas
- The Department of Chemistry, University of Washington , Box 351700, Seattle, Washington 98195-1700, United States
| | - Erin M Hanada
- The Department of Chemistry, University of Washington , Box 351700, Seattle, Washington 98195-1700, United States
| | - Werner Kaminsky
- The Department of Chemistry, University of Washington , Box 351700, Seattle, Washington 98195-1700, United States
| | - Julie A Kovacs
- The Department of Chemistry, University of Washington , Box 351700, Seattle, Washington 98195-1700, United States
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36
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Fischer AA, Stracey N, Lindeman SV, Brunold TC, Fiedler AT. Synthesis, X-ray Structures, Electronic Properties, and O 2/NO Reactivities of Thiol Dioxygenase Active-Site Models. Inorg Chem 2016; 55:11839-11853. [PMID: 27801576 DOI: 10.1021/acs.inorgchem.6b01931] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
Abstract
Mononuclear non-heme iron complexes that serve as structural and functional mimics of the thiol dioxygenases (TDOs), cysteine dioxygenase (CDO) and cysteamine dioxygenase (ADO), have been prepared and characterized with crystallographic, spectroscopic, kinetic, and computational methods. The high-spin Fe(II) complexes feature the facially coordinating tris(4,5-diphenyl-1-methylimidazol-2-yl)phosphine (Ph2TIP) ligand that replicates the three histidine (3His) triad of the TDO active sites. Further coordination with bidentate l-cysteine ethyl ester (CysOEt) or cysteamine (CysAm) anions yielded five-coordinate (5C) complexes that resemble the substrate-bound forms of CDO and ADO, respectively. Detailed electronic-structure descriptions of the [Fe(Ph2TIP)(LS,N)]BPh4 complexes, where LS,N = CysOEt (1) or CysAm (2), were generated through a combination of spectroscopic techniques [electronic absorption, magnetic circular dichroism (MCD)] and density functional theory (DFT). Complexes 1 and 2 decompose in the presence of O2 to yield the corresponding sulfinic acid (RSO2H) products, thereby emulating the reactivity of the TDO enzymes and related complexes. Rate constants and activation parameters for the dioxygenation reactions were measured and interpreted with the aid of DFT calculations for O2-bound intermediates. Treatment of the TDO models with nitric oxide (NO)-a well-established surrogate of O2-led to a mixture of high-spin and low-spin {FeNO}7 species at low temperature (-70 °C), as indicated by electron paramagnetic resonance (EPR) spectroscopy. At room temperature, these Fe/NO adducts convert to a common species with EPR and infrared (IR) features typical of cationic dinitrosyl iron complexes (DNICs). To complement these results, parallel spectroscopic, computational, and O2/NO reactivity studies were carried out using previously reported TDO models that feature an anionic hydrotris(3-phenyl-5-methyl-pyrazolyl)borate (Ph,MeTp-) ligand. Though the O2 reactivities of the Ph2TIP- and Ph,MeTp-based complexes are quite similar, the supporting ligand perturbs the energies of Fe 3d-based molecular orbitals and modulates Fe-S bond covalency, suggesting possible rationales for the presence of neutral 3His coordination in CDO and ADO.
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Affiliation(s)
- Anne A Fischer
- Department of Chemistry, Marquette University , Milwaukee, Wisconsin 53201, United States
| | - Nuru Stracey
- Department of Chemistry, University of Wisconsin-Madison , Madison, Wisconsin 53706, United States
| | - Sergey V Lindeman
- Department of Chemistry, Marquette University , Milwaukee, Wisconsin 53201, United States
| | - Thomas C Brunold
- Department of Chemistry, University of Wisconsin-Madison , Madison, Wisconsin 53706, United States
| | - Adam T Fiedler
- Department of Chemistry, Marquette University , Milwaukee, Wisconsin 53201, United States
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37
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Sahu S, Goldberg DP. Activation of Dioxygen by Iron and Manganese Complexes: A Heme and Nonheme Perspective. J Am Chem Soc 2016; 138:11410-28. [PMID: 27576170 DOI: 10.1021/jacs.6b05251] [Citation(s) in RCA: 229] [Impact Index Per Article: 28.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
The rational design of well-defined, first-row transition metal complexes that can activate dioxygen has been a challenging goal for the synthetic inorganic chemist. The activation of O2 is important in part because of its central role in the functioning of metalloenzymes, which utilize O2 to perform a number of challenging reactions including the highly selective oxidation of various substrates. There is also great interest in utilizing O2, an abundant and environmentally benign oxidant, in synthetic catalytic oxidation systems. This Perspective brings together recent examples of biomimetic Fe and Mn complexes that can activate O2 in heme or nonheme-type ligand environments. The use of oxidants such as hypervalent iodine (e.g., ArIO), peracids (e.g., m-CPBA), peroxides (e.g., H2O2) or even superoxide is a popular choice for accessing well-characterized metal-superoxo, metal-peroxo, or metal-oxo species, but the instances of biomimetic Fe/Mn complexes that react with dioxygen to yield such observable metal-oxygen species are surprisingly few. This Perspective focuses on mononuclear Fe and Mn complexes that exhibit reactivity with O2 and lead to spectroscopically observable metal-oxygen species, and/or oxidize biologically relevant substrates. Analysis of these examples reveals that solvent, spin state, redox potential, external co-reductants, and ligand architecture can all play important roles in the O2 activation process.
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Affiliation(s)
- Sumit Sahu
- Department of Chemistry, The Johns Hopkins University , Baltimore, Maryland 21218, United States
| | - David P Goldberg
- Department of Chemistry, The Johns Hopkins University , Baltimore, Maryland 21218, United States
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McQuilken AC, Matsumura H, Dürr M, Confer AM, Sheckelton JP, Siegler MA, McQueen TM, Ivanović-Burmazović I, Moënne-Loccoz P, Goldberg DP. Photoinitiated Reactivity of a Thiolate-Ligated, Spin-Crossover Nonheme {FeNO}(7) Complex with Dioxygen. J Am Chem Soc 2016; 138:3107-17. [PMID: 26919583 DOI: 10.1021/jacs.5b12741] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Abstract
The nonheme iron complex, [Fe(NO)(N3PyS)]BF4, is a rare example of an {FeNO}(7) species that exhibits spin-crossover behavior. The comparison of X-ray crystallographic studies at low and high temperatures and variable-temperature magnetic susceptibility measurements show that a low-spin S = 1/2 ground state is populated at 0-150 K, while both low-spin S = 1/2 and high-spin S = 3/2 states are populated at T > 150 K. These results explain the observation of two N-O vibrational modes at 1737 and 1649 cm(-1) in CD3CN for [Fe(NO)(N3PyS)]BF4 at room temperature. This {FeNO}(7) complex reacts with dioxygen upon photoirradiation with visible light in acetonitrile to generate a thiolate-ligated, nonheme iron(III)-nitro complex, [Fe(III)(NO2)(N3PyS)](+), which was characterized by EPR, FTIR, UV-vis, and CSI-MS. Isotope labeling studies, coupled with FTIR and CSI-MS, show that one O atom from O2 is incorporated in the Fe(III)-NO2 product. The O2 reactivity of [Fe(NO)(N3PyS)]BF4 in methanol is dramatically different from CH3CN, leading exclusively to sulfur-based oxidation, as opposed to NO· oxidation. A mechanism is proposed for the NO· oxidation reaction that involves formation of both Fe(III)-superoxo and Fe(III)-peroxynitrite intermediates and takes into account the experimental observations. The stability of the Fe(III)-nitrite complex is limited, and decay of [Fe(III)(NO2)(N3PyS)](+) leads to {FeNO}(7) species and sulfur oxygenated products. This work demonstrates that a single mononuclear, thiolate-ligated nonheme {FeNO}(7) complex can exhibit reactivity related to both nitric oxide dioxygenase (NOD) and nitrite reductase (NiR) activity. The presence of the thiolate donor is critical to both pathways, and mechanistic insights into these biologically relevant processes are presented.
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Affiliation(s)
- Alison C McQuilken
- Department of Chemistry, The Johns Hopkins University , Baltimore, Maryland 21218, United States
| | - Hirotoshi Matsumura
- Oregon Health & Science University, Institute of Environmental Health, Portland, Oregon 97239, United States
| | - Maximilian Dürr
- Department of Chemistry and Pharmacy, University of Erlangen-Nürnberg , 91058, Erlangen, Germany
| | - Alex M Confer
- Department of Chemistry, The Johns Hopkins University , Baltimore, Maryland 21218, United States
| | - John P Sheckelton
- Department of Chemistry, The Johns Hopkins University , Baltimore, Maryland 21218, United States.,Institute for Quantum Matter and Department of Physics and Astronomy, The Johns Hopkins University , Baltimore, Maryland 21218, United States
| | - Maxime A Siegler
- Department of Chemistry, The Johns Hopkins University , Baltimore, Maryland 21218, United States
| | - Tyrel M McQueen
- Department of Chemistry, The Johns Hopkins University , Baltimore, Maryland 21218, United States.,Institute for Quantum Matter and Department of Physics and Astronomy, The Johns Hopkins University , Baltimore, Maryland 21218, United States.,Department of Materials Science and Engineering, The Johns Hopkins University , Baltimore, Maryland 21218, United States
| | | | - Pierre Moënne-Loccoz
- Oregon Health & Science University, Institute of Environmental Health, Portland, Oregon 97239, United States
| | - David P Goldberg
- Department of Chemistry, The Johns Hopkins University , Baltimore, Maryland 21218, United States
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Lamb AC, Wang Z, Cook TM, Sharma B, Chen SJ, Lu Z, Steren CA, Lin Z, Xue ZL. Preparation of all N-coordinated zirconium amide amidinates and studies of their reactions with dioxygen and water. Polyhedron 2016. [DOI: 10.1016/j.poly.2015.07.045] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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40
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Sallmann M, Braun B, Limberg C. Dioxygenation of cysteamine to hypotaurine at a tris(pyrazolyl)borate iron(ii) unit - cysteamine dioxygenase mimicking? Chem Commun (Camb) 2015; 51:6785-7. [PMID: 25786780 DOI: 10.1039/c5cc01083g] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A novel complex Tp(Me,Ph)Fe(SCH2CH2NH2) has been synthesized as a speculative model for ADO. Indeed its reaction with O2 led to the dioxygenation of the S atom and thus to hypotaurine. This finding may allow us to draw conclusions on the constitution of the ADO active site, whose structure is still unknown.
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Affiliation(s)
- M Sallmann
- Department of Chemistry, Humboldt-Universität zu Berlin, Brook-Taylor-Str. 2, 12489 Berlin, Germany.
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41
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Sallmann M, Limberg C. Utilizing the Trispyrazolyl Borate Ligand for the Mimicking of O2-Activating Mononuclear Nonheme Iron Enzymes. Acc Chem Res 2015; 48:2734-43. [PMID: 26305516 DOI: 10.1021/acs.accounts.5b00148] [Citation(s) in RCA: 48] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Mononuclear, O2-activating nonheme iron enzymes are a fascinating class of metalloproteines, capable of realizing the most different reactions, ranging from C-H activation, via O atom transfer to C-C bond cleavage, in the course of O2 activation. They can lead us the way to achieve similar reactions with comparable efficiency and selectivity in chemical laboratories, which would be highly desirable aiming at accessing value-added products or to achieve degradation of unwanted compounds. Hence, these enyzmes motivate attempts to construct artificial low-molecular weight analogues, mimicking structural or functional characteristics. Such models can, for instance, provide insights about which of the features inherent to an active site are essential and guarantee the enzyme function, and from this kind of information the minimal requirements for a biomimetic or bioinspired complex that may be applied in catalysis can be derived. On the other hand, they can contribute to an understanding of the enzyme functioning. In order to create such replicates, it is important to faithfully mimic the surroundings of the iron centers in their active sites. Most of them feature two histidine residues and one carboxylate donor, while a few exhibit a deceptively simple (His)3Fe active site. For the simulation of these, the trispyrazolyl borate ligand (Tp) particularly offers itself, as the facial arrangement of three pyrazole donors is reminiscent of the three histidine-derived imidazole donors. The focus of this Account will be on bioinorganic/biomimetic research from our laboratory utilizing Tp ligands to develop molecular models for (i) two representatives of the (His)3Fe-enzyme family, namely, the cysteine dioxygenase (CDO) and acetyl acetone dioxygenase (Dke1), (ii) a related but less well-explored variant of the CDO-the 2-aminoethanethiol dioxygenase-as well as (iii) the 2-His-1-carboxylate representative 1-aminocyclopropane-1-carboxylic acid oxidase (ACCO). The CDO catalyzes the dioxygenation of cysteine with O2 to give cysteine sulfinic acid, which could be mimicked at TpFe units in a realistic manner. Furthermore, the successful dioxygenation of 2-aminoethanethiol at the same complex metal fragments lends further support to the hypothesis that the active sites of CDO and the one of 2-aminoethanethiol dioxygenase, whose structure is unknown, are quite similar. Dke1 is capable of cleaving diketones and ketoesters to give the corresponding carboxylic acids and α-keto aldehydes, and Tp-based models have achieved comparable C-C bond cleavage reactions. The ACCO develops ethylene from ACC in the course of oxidation, and recently this has been achieved the first time for a TpFe model, too.
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Affiliation(s)
- Madleen Sallmann
- Humboldt-Universität zu Berlin, Department of Chemistry, Brook-Taylor-Str. 2, 12489 Berlin, Germany
| | - Christian Limberg
- Humboldt-Universität zu Berlin, Department of Chemistry, Brook-Taylor-Str. 2, 12489 Berlin, Germany
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42
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Kumar S, Mandon D. Versatile Coordination Mode of a New Pyridine-Based Ditopic Ligand with Transition Metals: From Regular Pyridine to Alkyne and Alkenyl Bindings and Indolizinium Formation. Inorg Chem 2015. [PMID: 26200923 DOI: 10.1021/acs.inorgchem.5b01096] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The new BPMPB ligand, namely, bis[1-bis(2-pyridylmethyl),1 (pyridyl)]butyne, can be very easily obtained as a side product in the known reaction of picolyl chloride and sodium acetylide (which major product is the known terminal alkyne-substituted tripod). This symmetrical ligand contains two identical coordination sites with two methylenepyridines and one pyridyl group on each side, linked by an alkyne function providing a semirigid segment. Together with the molecular structure of the ligand which is reported, we describe the preparation of complexes with Fe(II)Cl2, Co(II)Cl2, Ni(II)Cl2, Cu(I)Cl, and Zn(II)Cl2 salts. All complexes have been characterized by X-ray diffraction studies as well as by standard spectroscopic techniques. The striking point in this work is the diversity of the structures that are obtained. Co(II) and Zn(II) provide isostructural dinuclear complexes in which both coordination sites are occupied within a tetrahedral symmetry. The Cu(I) complex is also a dinuclear compound, but in that case, the copper atom is coordinated to the alkyne moiety, two pyridines, and a bridging chloride. The (13)C NMR spectrum of the copper complex confirms that the metal center is coordinated to the alkyne in solution. The coordination of Ni(II) results in the formation of a mononuclear complex in which a pyridine has fused with the alkyne moiety to generate an indolizinium group; the structure of the corresponding alkenyl complex is reported. Finally, the addition of FeCl2 to the ligand results in the formation of a mononuclear complex with a free, noncoordinated indolizinium. The sequence developed in the present work illustrates the possibility for the metal centers to adopt various coordination modes which may be relevant to the conversion of an alkyne and a pyridyl unit into indolizinium.
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Affiliation(s)
- Sushil Kumar
- Laboratoire de Chimie, Electrochimie Moléculaires et Chimie Analytique, UMR 6521, CNRS-Université de Bretagne Occidentale, 6 Avenue Victor Le Gorgeu CS 93837, F-29238 Brest cedex 3, France
| | - Dominique Mandon
- Laboratoire de Chimie, Electrochimie Moléculaires et Chimie Analytique, UMR 6521, CNRS-Université de Bretagne Occidentale, 6 Avenue Victor Le Gorgeu CS 93837, F-29238 Brest cedex 3, France
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Mitra M, Nimir H, Demeshko S, Bhat SS, Malinkin SO, Haukka M, Lloret-Fillol J, Lisensky GC, Meyer F, Shteinman AA, Browne WR, Hrovat DA, Richmond MG, Costas M, Nordlander E. Nonheme Fe(IV) Oxo Complexes of Two New Pentadentate Ligands and Their Hydrogen-Atom and Oxygen-Atom Transfer Reactions. Inorg Chem 2015. [PMID: 26198840 DOI: 10.1021/ic5029564] [Citation(s) in RCA: 57] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
Two new pentadentate {N5} donor ligands based on the N4Py (N4Py = N,N-bis(2-pyridylmethyl)-N-bis(2-pyridyl)methylamine) framework have been synthesized, viz. [N-(1-methyl-2-benzimidazolyl)methyl-N-(2-pyridyl)methyl-N-(bis-2-pyridyl methyl)amine] (L(1)) and [N-bis(1-methyl-2-benzimidazolyl)methyl-N-(bis-2-pyridylmethyl)amine] (L(2)), where one or two pyridyl arms of N4Py have been replaced by corresponding (N-methyl)benzimidazolyl-containing arms. The complexes [Fe(II)(CH3CN)(L)](2+) (L = L(1) (1); L(2) (2)) were synthesized, and reaction of these ferrous complexes with iodosylbenzene led to the formation of the ferryl complexes [Fe(IV)(O)(L)](2+) (L = L(1) (3); L(2) (4)), which were characterized by UV-vis spectroscopy, high resolution mass spectrometry, and Mössbauer spectroscopy. Complexes 3 and 4 are relatively stable with half-lives at room temperature of 40 h (L = L(1)) and 2.5 h (L = L(2)). The redox potentials of 1 and 2, as well as the visible spectra of 3 and 4, indicate that the ligand field weakens as ligand pyridyl substituents are progressively substituted by (N-methyl)benzimidazolyl moieties. The reactivities of 3 and 4 in hydrogen-atom transfer (HAT) and oxygen-atom transfer (OAT) reactions show that both complexes exhibit enhanced reactivities when compared to the analogous N4Py complex ([Fe(IV)(O)(N4Py)](2+)), and that the normalized HAT rates increase by approximately 1 order of magnitude for each replacement of a pyridyl moiety; i.e., [Fe(IV)(O)(L(2))](2+) exhibits the highest rates. The second-order HAT rate constants can be directly related to the substrate C-H bond dissociation energies. Computational modeling of the HAT reactions indicates that the reaction proceeds via a high spin transition state.
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Affiliation(s)
- Mainak Mitra
- †Chemical Physics, Department of Chemistry, Lund University, Box 124, SE-221 00, Lund, Sweden
| | - Hassan Nimir
- ‡Department of Chemistry and Earth Sciences, College of Arts and Sciences, Qatar University, P.O. Box 2713, Doha, State of Qatar
| | - Serhiy Demeshko
- §Institute of Inorganic Chemistry, Georg-August-University Göttingen, Tammanstrasse 4, D-37077 Göttingen, Germany
| | - Satish S Bhat
- †Chemical Physics, Department of Chemistry, Lund University, Box 124, SE-221 00, Lund, Sweden
| | - Sergey O Malinkin
- †Chemical Physics, Department of Chemistry, Lund University, Box 124, SE-221 00, Lund, Sweden
| | - Matti Haukka
- ⊥Department of Chemistry, University of Jyväskylä, P.O. Box-35, Jyväskylä, FI-40014, Finland
| | - Julio Lloret-Fillol
- ¶QBIS, Department of Chemistry, University de Girona, Campus Montilivi, E-17071 Girona, Spain
| | - George C Lisensky
- ∥Department of Chemistry, Beloit College, 700 College Street, Beloit, Wisconsin 53511, United States
| | - Franc Meyer
- §Institute of Inorganic Chemistry, Georg-August-University Göttingen, Tammanstrasse 4, D-37077 Göttingen, Germany
| | - Albert A Shteinman
- #Institute of Problems of Chemical Physics, Chernogolovka, Moscow District, 142432, Russian Federation
| | - Wesley R Browne
- ∇Stratingh Institute for Chemistry, Faculty of Mathematics and Natural Sciences, University of Groningen, Nijenborgh 4, 9747AG Groningen, The Netherlands
| | - David A Hrovat
- ○Center for Advanced Scientific Computing and Modeling, University of North Texas, Denton, Texas 76203, United States.,◆Department of Chemistry, University of North Texas, Denton, Texas 76203, United States
| | - Michael G Richmond
- ◆Department of Chemistry, University of North Texas, Denton, Texas 76203, United States
| | - Miquel Costas
- ¶QBIS, Department of Chemistry, University de Girona, Campus Montilivi, E-17071 Girona, Spain
| | - Ebbe Nordlander
- †Chemical Physics, Department of Chemistry, Lund University, Box 124, SE-221 00, Lund, Sweden
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44
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Yamasaki M, Ishida T. First Iron(II) Spin-crossover Complex with an N5S Coordination Sphere. CHEM LETT 2015. [DOI: 10.1246/cl.150301] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/02/2023]
Affiliation(s)
- Masaru Yamasaki
- Department of Engineering Science, The University of Electro-Communications
| | - Takayuki Ishida
- Department of Engineering Science, The University of Electro-Communications
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45
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Sallmann M, Kumar S, Chernev P, Nehrkorn J, Schnegg A, Kumar D, Dau H, Limberg C, de Visser SP. Structure and Mechanism Leading to Formation of the Cysteine Sulfinate Product Complex of a Biomimetic Cysteine Dioxygenase Model. Chemistry 2015; 21:7470-9. [DOI: 10.1002/chem.201500644] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/15/2015] [Indexed: 01/10/2023]
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46
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Cavell AC, Hartley CL, Liu D, Tribble CS, McNamara WR. Sulfinato Iron(III) Complex for Electrocatalytic Proton Reduction. Inorg Chem 2015; 54:3325-30. [DOI: 10.1021/ic5030394] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Affiliation(s)
- Andrew C. Cavell
- Department of Chemistry, College of William and Mary, 540 Landrum Drive, Williamsburg, Virginia 23185, United States
| | - Carolyn L. Hartley
- Department of Chemistry, College of William and Mary, 540 Landrum Drive, Williamsburg, Virginia 23185, United States
| | - Dan Liu
- Department of Chemistry, College of William and Mary, 540 Landrum Drive, Williamsburg, Virginia 23185, United States
| | - Connor S. Tribble
- Department of Chemistry, College of William and Mary, 540 Landrum Drive, Williamsburg, Virginia 23185, United States
| | - William R. McNamara
- Department of Chemistry, College of William and Mary, 540 Landrum Drive, Williamsburg, Virginia 23185, United States
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47
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Driggers CM, Hartman SJ, Karplus PA. Structures of Arg- and Gln-type bacterial cysteine dioxygenase homologs. Protein Sci 2014; 24:154-61. [PMID: 25307852 DOI: 10.1002/pro.2587] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/08/2014] [Revised: 10/07/2014] [Accepted: 10/09/2014] [Indexed: 11/12/2022]
Abstract
In some bacteria, cysteine is converted to cysteine sulfinic acid by cysteine dioxygenases (CDO) that are only ∼15-30% identical in sequence to mammalian CDOs. Among bacterial proteins having this range of sequence similarity to mammalian CDO are some that conserve an active site Arg residue ("Arg-type" enzymes) and some having a Gln substituted for this Arg ("Gln-type" enzymes). Here, we describe a structure from each of these enzyme types by analyzing structures originally solved by structural genomics groups but not published: a Bacillus subtilis "Arg-type" enzyme that has cysteine dioxygenase activity (BsCDO), and a Ralstonia eutropha "Gln-type" CDO homolog of uncharacterized activity (ReCDOhom). The BsCDO active site is well conserved with mammalian CDO, and a cysteine complex captured in the active site confirms that the cysteine binding mode is also similar. The ReCDOhom structure reveals a new active site Arg residue that is hydrogen bonding to an iron-bound diatomic molecule we have interpreted as dioxygen. Notably, the Arg position is not compatible with the mode of Cys binding seen in both rat CDO and BsCDO. As sequence alignments show that this newly discovered active site Arg is well conserved among "Gln-type" CDO enzymes, we conclude that the "Gln-type" CDO homologs are not authentic CDOs but will have substrate specificity more similar to 3-mercaptopropionate dioxygenases.
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Affiliation(s)
- Camden M Driggers
- Department of Biochemistry and Biophysics, 2011 Ag & Life Sciences Bldg, Oregon State University, Corvallis, Oregon, 97331
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48
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Lamb AC, Lu Z, Xue ZL. Reactions of zirconium amide amidinates with dioxygen. Observation of an unusual peroxo intermediate in the formation of oxo compounds. Chem Commun (Camb) 2014; 50:10517-20. [DOI: 10.1039/c4cc04032e] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
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49
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Widger LR, Jiang Y, McQuilken AC, Yang T, Siegler MA, Matsumura H, Moënne-Loccoz P, Kumar D, de Visser SP, Goldberg DP. Thioether-ligated iron(II) and iron(III)-hydroperoxo/alkylperoxo complexes with an H-bond donor in the second coordination sphere. Dalton Trans 2014; 43:7522-32. [PMID: 24705907 PMCID: PMC4319814 DOI: 10.1039/c4dt00281d] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
Abstract
The non-heme iron complexes, [Fe(II)(N3PySR)(CH3CN)](BF4)2 () and [Fe(II)(N3Py(amide)SR)](BF4)2 (), afford rare examples of metastable Fe(iii)-OOH and Fe(iii)-OOtBu complexes containing equatorial thioether ligands and a single H-bond donor in the second coordination sphere. These peroxo complexes were characterized by a range of spectroscopic methods and density functional theory studies. The influence of a thioether ligand and of one H-bond donor on the stability and spectroscopic properties of these complexes was investigated.
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Affiliation(s)
- Leland R Widger
- Department of Chemistry, The Johns Hopkins University, 3400 North Charles Street, Baltimore, Maryland 21218, USA.
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50
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Sues PE, Forbes MW, Lough AJ, Morris RH. Ligand-based molecular recognition and dioxygen splitting: an endo epoxide ending. Dalton Trans 2014; 43:4137-45. [PMID: 24458017 DOI: 10.1039/c3dt53495b] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The phosphido complex RuCp*(PPh2CH=CHPPh2)(PPh2) (1) was exposed to a number of small molecules and was found to recognize and activate molecular oxygen in an unprecedented fashion: the ruthenium species split O2 in a ligand-based 4-electron reduction to produce an endo epoxide, as well as a phosphinito ligand. Based on XRD data, VT NMR studies, cyclooctene trapping studies, and crossover experiments it was determined that the reaction proceeded through an intramolecular mechanism in which initial oxidation of the phosphido ligand generated an end-on peroxo intermediate. This mechanism was also supported by computational studies and electrochemical experiments. In contrast, an analogue of 1, RuCp*(Ph2P(ortho-C6H4)PPh2)(PPh2) (3), reacted in an intermolecular fashion to generate two phosphinito ligands.
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Affiliation(s)
- Peter E Sues
- Department of Chemistry, University of Toronto, Toronto, Ontario M5S 3H6, Canada.
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