1
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Zhao Y, Qin H, Yang YL, Li JQ, Qin SY, Zhang AQ, Lei X. Weakly aligned Ti 3C 2T x MXene liquid crystals: measuring residual dipolar coupling in multiple co-solvent systems. NANOSCALE 2023; 15:7820-7828. [PMID: 37051680 DOI: 10.1039/d3nr00204g] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/05/2023]
Abstract
Residual Dipolar Coupling (RDC), acquired relying on weakly alignment media, is highly valuable for the structural elucidation of organic molecules. Arising from the striking features of no background signals and low critical concentrations, two-dimensional (2D) liquid crystals (LCs) show the clear advantages of acting as alignment media to measure RDCs. So far, creating multisolvent compatible 2D LC media through a simple and versatile method is still formidably challenging. Herein, we report the rapid creation of aligned media based on the Ti3C2Tx MXene, which self-aligned in multiple co-solvents including CH3OH-H2O, DMSO-H2O, DMF-H2O, and acetone-H2O. We demonstrated the applicability of these aligned media for the RDC measurement of small organic molecules with different polarities and solubilities. Notably, Ti3C2Tx MXene LCs without chemical modification enabled RDC measurements on aromatic molecules. The straightforward preparation of Ti3C2Tx media and its compatibility with multiple solvents will push RDC measurement as a routine methodology for structural elucidation. It may also facilitate the investigation of solvation effects on conformational dynamics.
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Affiliation(s)
- You Zhao
- Hubei Engineering Technology Research Centre of Energy Polymer Materials, School of Chemistry and Materials Science, South-Central Minzu University, Wuhan 430074, China.
- Key Laboratory of Catalysis and Energy Materials Chemistry of Ministry of Education and Hubei Key Laboratory of Catalysis and Materials Science, South-Central Minzu University, Wuhan, China
| | - Huan Qin
- Hubei Engineering Technology Research Centre of Energy Polymer Materials, School of Chemistry and Materials Science, South-Central Minzu University, Wuhan 430074, China.
- Key Laboratory of Catalysis and Energy Materials Chemistry of Ministry of Education and Hubei Key Laboratory of Catalysis and Materials Science, South-Central Minzu University, Wuhan, China
| | - Yan-Ling Yang
- School of Pharmaceutical Sciences, South-Central Minzu University, Wuhan, China.
| | - Jia-Qian Li
- School of Pharmaceutical Sciences, South-Central Minzu University, Wuhan, China.
| | - Si-Yong Qin
- Hubei Engineering Technology Research Centre of Energy Polymer Materials, School of Chemistry and Materials Science, South-Central Minzu University, Wuhan 430074, China.
- Key Laboratory of Catalysis and Energy Materials Chemistry of Ministry of Education and Hubei Key Laboratory of Catalysis and Materials Science, South-Central Minzu University, Wuhan, China
| | - Ai-Qing Zhang
- Hubei Engineering Technology Research Centre of Energy Polymer Materials, School of Chemistry and Materials Science, South-Central Minzu University, Wuhan 430074, China.
- Key Laboratory of Catalysis and Energy Materials Chemistry of Ministry of Education and Hubei Key Laboratory of Catalysis and Materials Science, South-Central Minzu University, Wuhan, China
| | - Xinxiang Lei
- School of Pharmaceutical Sciences, South-Central Minzu University, Wuhan, China.
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2
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Pathan S, Islam SS, Sen Gupta R, Maity B, Reddy PR, Mandal S, Anki Reddy K, Bose S. Fundamental Understanding of Ultrathin, Highly Stable Self-Assembled Liquid Crystalline Graphene Oxide Membranes Leading to Precise Molecular Sieving through Non-equilibrium Molecular Dynamics. ACS NANO 2023; 17:7272-7284. [PMID: 37036338 DOI: 10.1021/acsnano.2c10300] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/19/2023]
Abstract
Self-assembled graphene oxide lyotropic liquid crystal (GO LLC) structures are mostly formed in aqueous medium; however, most GO derivatives are water insoluble, so processing GO LLCs in water poses a practical limitation. The use of polar aprotic solvent (like dimethyl sulfoxide) for the formation of GO LLC structures would be interesting, because it would allow incorporating additives, like photoinitiators or cross-linkers, or blending with polymers that are insoluble in water, which hence would expand its scope. The well-balanced electrostatic interaction between DMSO and GO can promote and stabilize the GO nanosheets' alignment even at lower concentrations. With this in mind, herein we report mechanically robust, chlorine-tolerant, self-assembled nanostructured GO membranes for precise molecular sieving. Small-angle X-ray scattering and polarized optical microscopy confirmed the alignment of the modified GO nanosheets in polar aprotic solvent, and the LLC structure was effectively preserved even after cross-linking under UV light. We found that the modified GO membranes exhibited considerably improved salt rejection for monovalent ions (99%) and water flux (120 LMH) as compared to the shear-aligned GO membrane, which is well supported by forward osmosis simulation studies. Additionally, our simulation studies indicated that water molecules traveled a longer path while permeating through the GO membrane compared to the GO LLC membrane. Consequently, salt ions permeate slowly across the GO LLC membrane, yielding higher salt rejection than the GO membrane. This begins to suggest strong electrostatic repulsion with the salt ions, causing higher salt rejection in the GO LLC membrane. We foresee that the ordered cross-linked GO sheets contributed to excellent mechanical stability under a high-pressure, cross-flow, chlorine environment. Overall, these membranes are easily scalable, exhibit good mechanical stability, and represent a breakthrough for the potential use of polymerized GO LLC membranes in practical water remediation applications.
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Affiliation(s)
- Shabnam Pathan
- Department of Materials Engineering, Indian Institute of Science, Bengaluru-560012, India
| | - Sk Safikul Islam
- Department of Materials Engineering, Indian Institute of Science, Bengaluru-560012, India
| | - Ria Sen Gupta
- Department of Materials Engineering, Indian Institute of Science, Bengaluru-560012, India
| | - Barnali Maity
- Department of Materials Engineering, Indian Institute of Science, Bengaluru-560012, India
| | - P Rajasekhar Reddy
- Department of Chemical Engineering, Indian Institute of Technology, Guwahati-781039, Assam, India
| | - Samir Mandal
- Department of Materials Engineering, Indian Institute of Science, Bengaluru-560012, India
| | - K Anki Reddy
- Department of Chemical Engineering, Indian Institute of Technology Tirupati, Tirupati-517619, Andhra Pradesh, India
| | - Suryasarathi Bose
- Department of Materials Engineering, Indian Institute of Science, Bengaluru-560012, India
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3
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Venturi L, Bua E, Caputo G, Mileo V. Residual Dipolar Coupling Based Conformational Analysis Allows the Configurational Assessment of Steroids with up to Eight Stereocenters. Chempluschem 2023; 88:e202200391. [PMID: 36811319 DOI: 10.1002/cplu.202200391] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/07/2022] [Revised: 02/20/2023] [Accepted: 02/21/2023] [Indexed: 02/24/2023]
Abstract
Residual dipolar couplings (RDCs) induced by anisotropic media have been proved as a powerful tool for the structure elucidation of organic molecules in solution in nuclear magnetic resonance (NMR) based analysis. The value of dipolar couplings to solve complex conformational and configurational problems represents indeed an appealing analytical tool for the pharmaceutical industry particularly focusing on the stereochemistry characterization of NCEs since the early phase of the drug development process. In our work, RDCs were used for the conformational and configurational study of synthetic steroids with multiple stereocenters - prednisone and beclomethasone dipropionate (BDP) -. For both molecules the correct relative configuration was identified among all the possible diastereoisomers (32 and 128 respectively) arising from the compounds stereogenic carbons. Only for prednisone the use of additional experimental data (i. e. rOes) was necessary to resolve the right stereochemical structure.
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Affiliation(s)
- Luca Venturi
- Preclinical Analytics and Early Formulations Department, Chiesi Farmaceutici Spa, Largo Belloli 11/A, 43123, Parma, PR, Italy
| | - Emanuela Bua
- Food and Drug Department, University of Parma, Parco Area delle Scienze 27/A, 43124, Parma, PR, Italy
| | - Giulia Caputo
- Pharmacy Department, University "G. d'Annunzio" of Chieti-Pescara, Via dei Vestini, 66100, Chieti, CH, Italy
| | - Valentina Mileo
- Preclinical Analytics and Early Formulations Department, Chiesi Farmaceutici Spa, Largo Belloli 11/A, 43123, Parma, PR, Italy
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4
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Carvalho DS, da Silva DGB, Hallwass F, Navarro-Vázquez A. An Acrylonitrile-Based Copolymer Gel as an NMR Alignment Medium for Extraction of Residual Dipolar Couplings of Small Molecules in Aqueous Solution. Chempluschem 2023; 88:e202200446. [PMID: 36782376 DOI: 10.1002/cplu.202200446] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/12/2022] [Revised: 01/19/2023] [Indexed: 01/24/2023]
Abstract
An NMR weakly-aligning polymer gel has been prepared by copolymerization of acrylonitrile and 2-acrylamide-2-methyl-1-propanesulfonic acid in the presence of 1,4-butanediol diacrylate as a cross-linker. The polymer readily swells in water in a large range of temperatures, although the swelling ratio is decreased in saline solutions. The swollen gel can be mechanically compressed, in a reversible way, generating anisotropy, as easily shown in 2 H NMR experiments, and allowing measurement of 1 DCH residual dipolar couplings (RDCs) through F1-coupled HSQC experiments. The performance of this gel as a NMR alignment medium was evaluated in several water-soluble organic molecules and, while it provided RDCs of proper size for sucrose and even such as small molecule as 5-norbornen-2-ol, in the case of azidothymidine and cefuroxime sodium salt the strong interaction of these molecules with the gel prevented successful extraction of the RDCs.
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Affiliation(s)
- Daiane S Carvalho
- Departamento de Química Fundamental, Universidade Federal de Pernambuco Cidade Universitria, CEP, 50.740-540, Recife, PE, Brazil
| | - Danilo G B da Silva
- Departamento de Química Fundamental, Universidade Federal de Pernambuco Cidade Universitria, CEP, 50.740-540, Recife, PE, Brazil
| | - Fernando Hallwass
- Departamento de Química Fundamental, Universidade Federal de Pernambuco Cidade Universitria, CEP, 50.740-540, Recife, PE, Brazil
| | - Armando Navarro-Vázquez
- Departamento de Química Fundamental, Universidade Federal de Pernambuco Cidade Universitria, CEP, 50.740-540, Recife, PE, Brazil
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5
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Yu G, Wang G, Duan M, Jiang B, Zhang X, Li C, He L, Liu M. Self-Assembled Oligopeptide (FK) 4 as a Chiral Alignment Medium for the Anisotropic NMR Analysis of Organic Compounds. ACS APPLIED MATERIALS & INTERFACES 2022; 14:29223-29229. [PMID: 35712808 DOI: 10.1021/acsami.2c05506] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/15/2023]
Abstract
Anisotropic NMR parameters have been proven to be powerful for the structural elucidation of organic molecules. Herein, we present an alignment medium based on the self-assembled (FK)4 oligopeptide, showing excellent properties in measurements of anisotropic NMR parameters in both D2O and CD3OD. The preparation of the (FK)4-based alignment medium is simple and rapid. The low viscosity of the anisotropic phase makes it easy to be transferred to the NMR tube. The alignment of the oligopeptide is fast, stable, and homogeneous, with weak background signals, permitting the acquirement of high-quality NMR spectra. The performance of this alignment medium in residual dipolar coupling measurements and diastereomer discriminations is demonstrated by analyzing several different analytes. The enantiodiscrimination property of the (FK)4 oligopeptide is revealed by the difference of residual chemical shift anisotropy of the two enantiomers in the 1D 13C spectrum, granting its potential use for the quantification and identification of enantiomers of small molecules.
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Affiliation(s)
- Gangjin Yu
- State Key Laboratory of Magnetic Resonance and Atomic Molecular Physics, Key Laboratory of Magnetic Resonance in Biological Systems, National Center for Magnetic Resonance in Wuhan, Innovation Academy for Precision Measurement Science and Technology, Chinese Academy of Sciences, Wuhan 430071, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Guan Wang
- State Key Laboratory of Magnetic Resonance and Atomic Molecular Physics, Key Laboratory of Magnetic Resonance in Biological Systems, National Center for Magnetic Resonance in Wuhan, Innovation Academy for Precision Measurement Science and Technology, Chinese Academy of Sciences, Wuhan 430071, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Mojie Duan
- State Key Laboratory of Magnetic Resonance and Atomic Molecular Physics, Key Laboratory of Magnetic Resonance in Biological Systems, National Center for Magnetic Resonance in Wuhan, Innovation Academy for Precision Measurement Science and Technology, Chinese Academy of Sciences, Wuhan 430071, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Bin Jiang
- State Key Laboratory of Magnetic Resonance and Atomic Molecular Physics, Key Laboratory of Magnetic Resonance in Biological Systems, National Center for Magnetic Resonance in Wuhan, Innovation Academy for Precision Measurement Science and Technology, Chinese Academy of Sciences, Wuhan 430071, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Xu Zhang
- State Key Laboratory of Magnetic Resonance and Atomic Molecular Physics, Key Laboratory of Magnetic Resonance in Biological Systems, National Center for Magnetic Resonance in Wuhan, Innovation Academy for Precision Measurement Science and Technology, Chinese Academy of Sciences, Wuhan 430071, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Conggang Li
- State Key Laboratory of Magnetic Resonance and Atomic Molecular Physics, Key Laboratory of Magnetic Resonance in Biological Systems, National Center for Magnetic Resonance in Wuhan, Innovation Academy for Precision Measurement Science and Technology, Chinese Academy of Sciences, Wuhan 430071, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Lichun He
- State Key Laboratory of Magnetic Resonance and Atomic Molecular Physics, Key Laboratory of Magnetic Resonance in Biological Systems, National Center for Magnetic Resonance in Wuhan, Innovation Academy for Precision Measurement Science and Technology, Chinese Academy of Sciences, Wuhan 430071, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Maili Liu
- State Key Laboratory of Magnetic Resonance and Atomic Molecular Physics, Key Laboratory of Magnetic Resonance in Biological Systems, National Center for Magnetic Resonance in Wuhan, Innovation Academy for Precision Measurement Science and Technology, Chinese Academy of Sciences, Wuhan 430071, China
- University of Chinese Academy of Sciences, Beijing 100049, China
- Optics Valley Laboratory, Hubei 430074, China
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6
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Knoll K, Herold D, Hirschmann M, Thiele CM. A supramolecular and liquid crystalline water-based alignment medium based on azobenzene-substituted 1,3,5-benzenetricarboxamides. MAGNETIC RESONANCE IN CHEMISTRY : MRC 2022; 60:563-571. [PMID: 35266585 DOI: 10.1002/mrc.5266] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/27/2022] [Revised: 03/04/2022] [Accepted: 03/07/2022] [Indexed: 06/14/2023]
Abstract
A supramolecular, lyotropic liquid crystalline alignment medium based on an azobenzene-containing 1,3,5-benzenetricarboxamide (BTA) building block is described and investigated. As we demonstrate, this water-based system is suitable for the investigation of various water-soluble analytes and allows for a scaling of alignment strength through variation of temperature. Additionally, alignment is shown to reversibly collapse above a certain temperature, yielding an isotropic solution. This collapse allows for isotropic reference measurements, which are typically needed in addition to those in an anisotropic environment, to be performed using the same sample just by varying the temperature. The medium described thus provides easy access to anisotropic NMR observables and simplifies structure elucidation techniques based thereon.
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Affiliation(s)
- Kevin Knoll
- Clemens-Schöpf-Institute for Organic Chemistry and Biochemistry, Technische Universität Darmstadt, Darmstadt, Germany
| | - Dominik Herold
- Clemens-Schöpf-Institute for Organic Chemistry and Biochemistry, Technische Universität Darmstadt, Darmstadt, Germany
| | - Max Hirschmann
- Clemens-Schöpf-Institute for Organic Chemistry and Biochemistry, Technische Universität Darmstadt, Darmstadt, Germany
- Department of Fibre and Polymer Technology, School of Engineering Sciences in Chemistry, Biotechnology and Health, KTH Royal Institute of Technology, Stockholm, Sweden
| | - Christina M Thiele
- Clemens-Schöpf-Institute for Organic Chemistry and Biochemistry, Technische Universität Darmstadt, Darmstadt, Germany
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7
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Zhao Y, Yu Q, Cheng WW, Li JQ, Zhang AQ, Lei X, Yang Y, Qin SY. Ti 3C 2T x MXene Liquid Crystal: Access to Create Background-Free and Easy-Made Alignment Medium. ACS NANO 2022; 16:5454-5462. [PMID: 35311253 DOI: 10.1021/acsnano.1c09512] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
Abstract
The formation of lyotropic liquid crystals (LCs) in two-dimensional (2D) colloidal dispersions enables the production of mesoscopic/macroscopic ordered materials from nanoscale building blocks. In contrast to graphene oxide (GO) LCs, the practical applications of MXene LCs are less exploited. This study bridges the gap by utilizing a simple and versatile fabrication method to prepare Ti3C2Tx MXene LC that can be applied as a background-free alignment medium for the residual dipolar coupling (RDC) measurement of organic molecules. Ti3C2Tx LC displays the size- and concentration-dependent alignment degree. Ti3C2Tx nanoflakes with an average size of around 600 nm can provide the quadrupolar 2H splitting of 71 Hz at a concentration of 50 mg/mL and show excellent fluidity at such a high concentration. Compared with other alignment media, Ti3C2Tx LC exhibits the features of no-background and narrow line broadening, which actualizes the acquirement of clean and high-quality NMR spectra for the accurate RDC extraction. Notably, the alignment of LCs is determined to be maintainable in the redispersed solution after freeze-drying, providing the great convenience for the preparation of alignment Ti3C2Tx media, long-term sample preservation, and quantitative evaluation of alignment degree. Meanwhile, the alignment LC media for RDC measurement can be established in other MXenes such as Ti2CTx and Ti3CNTx. Collectively, our findings demonstrate the potential of creating various alignment media from the fascinating MXene family.
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Affiliation(s)
- You Zhao
- Laboratory of Catalysis and Energy Materials Chemistry of Ministry of Education & Hubei Key Laboratory of Catalysis and Materials Science, South-Central University for Nationalities, Wuhan 430074, P. R. China
| | - Qinghua Yu
- State Key Laboratory for Modification of Chemical Fibers and Polymer Materials, College of Textiles, Donghua University, Shanghai 201620, P. R. China
| | - Wei-Wei Cheng
- Laboratory of Catalysis and Energy Materials Chemistry of Ministry of Education & Hubei Key Laboratory of Catalysis and Materials Science, South-Central University for Nationalities, Wuhan 430074, P. R. China
| | - Jia-Qian Li
- School of Pharmaceutical Sciences, South-Central University for Nationalities, Wuhan 430074, P. R. China
| | - Ai-Qing Zhang
- Laboratory of Catalysis and Energy Materials Chemistry of Ministry of Education & Hubei Key Laboratory of Catalysis and Materials Science, South-Central University for Nationalities, Wuhan 430074, P. R. China
| | - Xinxiang Lei
- School of Pharmaceutical Sciences, South-Central University for Nationalities, Wuhan 430074, P. R. China
| | - Yingkui Yang
- Laboratory of Catalysis and Energy Materials Chemistry of Ministry of Education & Hubei Key Laboratory of Catalysis and Materials Science, South-Central University for Nationalities, Wuhan 430074, P. R. China
| | - Si-Yong Qin
- Laboratory of Catalysis and Energy Materials Chemistry of Ministry of Education & Hubei Key Laboratory of Catalysis and Materials Science, South-Central University for Nationalities, Wuhan 430074, P. R. China
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8
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Wesp S, Wolf K, Immel S, Reggelin M. Poly(arylisocyanides) as Versatile, Enantiodiscriminating Alignment Media for Small Molecules. Chempluschem 2022; 87:e202100507. [PMID: 35072980 DOI: 10.1002/cplu.202100507] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/17/2021] [Revised: 01/02/2022] [Indexed: 11/08/2022]
Abstract
Lyotropic liquid crystalline (LLC) phases of amino acid derived polyarylisocyanides were employed as chiral alignment media for the measurement of residual dipolar couplings (RDCs) of small chiral organic molecules. Anisotropic samples in CDCl3 displayed quadrupolar splittings of the deuterium signal in the range of several hundreds of Hertz. The LLC phases showed excellent orienting properties for a broad range of analytes bearing various functional groups. The precise extraction of RDCs in the range of up to ±40 Hertz from F2-coupled HSQC spectra was possible. Additionally, the chiral environment offers the opportunity for diastereomorphous interactions with the enantiomers of chiral analytes leading to two different sets of RDCs. This differential order effect was particularly pronounced with ketones and alcohols.
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Affiliation(s)
- Svenja Wesp
- Technische Universität Darmstadt, Clemens Schöpf Institut für Organische Chemie und Biochemie, Alarich-Weiss-Str. 4, 64287, Darmstadt, Germany
| | - Kai Wolf
- Technische Universität Darmstadt, Clemens Schöpf Institut für Organische Chemie und Biochemie, Alarich-Weiss-Str. 4, 64287, Darmstadt, Germany
| | - Stefan Immel
- Technische Universität Darmstadt, Clemens Schöpf Institut für Organische Chemie und Biochemie, Alarich-Weiss-Str. 4, 64287, Darmstadt, Germany
| | - Michael Reggelin
- Technische Universität Darmstadt, Clemens Schöpf Institut für Organische Chemie und Biochemie, Alarich-Weiss-Str. 4, 64287, Darmstadt, Germany
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9
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Roth FA, Schmidts V, Rettig J, Thiele CM. Model free analysis of experimental residual dipolar couplings in small organic compounds. Phys Chem Chem Phys 2021; 24:281-286. [PMID: 34881759 DOI: 10.1039/d1cp02324a] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Abstract
Residual dipolar couplings (RDCs) contain information on the relative arrangement and dynamics of internuclear spin vectors in chemical compounds. Classically, RDC data is analyzed by fitting to structure models, while model-free approaches (MFA) directly relate RDCs to the corresponding internuclear vectors. The recently introduced software TITANIA implements the MFA and extracts structure and dynamics parameters directly from RDCs to facilitate de novo structure refinement for small organic compounds. Encouraged by our previous results on simulated data, we herein focus on the prerequisites and challenges faced when using purely experimental data for this approach. These concern mainly the fact that not all couplings are accessible in all media, leading to voids in the RDC matrix and the concomitant effects on the structure refinement. It is shown that RDC data sets obtained experimentally from currently available alignment media and measurement methods are of sufficient quality to allow relative configuration determination even when the relative configuration of the analyte is completely unknown.
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Affiliation(s)
- Felix A Roth
- Clemens-Schöpf-Institut für Organische Chemie und Biochemie, Technical University of Darmstadt, Alarich-Weiss-Str. 16, 64287 Darmstadt, Germany.
| | - Volker Schmidts
- Clemens-Schöpf-Institut für Organische Chemie und Biochemie, Technical University of Darmstadt, Alarich-Weiss-Str. 16, 64287 Darmstadt, Germany.
| | - Jan Rettig
- Clemens-Schöpf-Institut für Organische Chemie und Biochemie, Technical University of Darmstadt, Alarich-Weiss-Str. 16, 64287 Darmstadt, Germany.
| | - Christina M Thiele
- Clemens-Schöpf-Institut für Organische Chemie und Biochemie, Technical University of Darmstadt, Alarich-Weiss-Str. 16, 64287 Darmstadt, Germany.
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10
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Roth FA, Schmidts V, Thiele CM. TITANIA: Model-Free Interpretation of Residual Dipolar Couplings in the Context of Organic Compounds. J Org Chem 2021; 86:15387-15402. [PMID: 34677977 DOI: 10.1021/acs.joc.1c01926] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Residual dipolar couplings (RDCs) become increasingly important as additional NMR parameters in the structure elucidation of organic compounds but are usually used in fitting procedures to discriminate between (computed) structures that are in accordance with RDCs and others that can be ruled out. Thus, the determination of configurations requires prior structural information. The direct use of RDCs as restraints to construct structures based on RDCs has only recently begun also in organic compounds. No protocol has been published though that uses the vector and dynamics information available in multialignment data sets directly for the joint determination of conformation and configuration of organic compounds. This is proposed in the current study. We show that by employing these data, even a flat or random start structure converges into the correctly configured structure when employing multiple alignment data sets in our iterative procedure. The requirements in terms of the number of RDCs and alignment media necessary are discussed in detail.
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Affiliation(s)
- Felix A Roth
- Clemens-Schöpf-Institut für Organische Chemie und Biochemie, Technical University of Darmstadt, Alarich-Weiss-Str. 16, 64287 Darmstadt, Germany
| | - Volker Schmidts
- Clemens-Schöpf-Institut für Organische Chemie und Biochemie, Technical University of Darmstadt, Alarich-Weiss-Str. 16, 64287 Darmstadt, Germany
| | - Christina M Thiele
- Clemens-Schöpf-Institut für Organische Chemie und Biochemie, Technical University of Darmstadt, Alarich-Weiss-Str. 16, 64287 Darmstadt, Germany
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11
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Pedersen KD, Zhang J, Gotfredsen CH. Practical considerations for working with graphene oxide as alignment media for RDC measurements. MAGNETIC RESONANCE IN CHEMISTRY : MRC 2021; 59:738-745. [PMID: 33656175 DOI: 10.1002/mrc.5143] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/01/2020] [Revised: 02/20/2021] [Accepted: 02/23/2021] [Indexed: 06/12/2023]
Affiliation(s)
- Katja D Pedersen
- Department of Chemistry, Technical University of Denmark, Kongens Lyngby, Denmark
| | - Jingdong Zhang
- Department of Chemistry, Technical University of Denmark, Kongens Lyngby, Denmark
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12
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Krupp A, Noll M, Reggelin M. Valine derived poly (acetylenes) as versatile chiral lyotropic liquid crystalline alignment media for RDC-based structure elucidations. MAGNETIC RESONANCE IN CHEMISTRY : MRC 2021; 59:577-586. [PMID: 32012341 DOI: 10.1002/mrc.5003] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/12/2019] [Revised: 01/22/2020] [Accepted: 01/27/2020] [Indexed: 06/10/2023]
Abstract
Anisotropic samples of lyotropic liquid crystalline (LLC) phases of valine derived polyaryl acetylenes were employed as chiral alignment media for the measurement of residual dipolar couplings (RDCs) of 12 small, chiral, organic molecules. The quadrupolar splitting of the deuterium signal of CDCl3 can be adjusted by temperature and concentration changes from 0 to 350 Hz. The LLC phases showed excellent orienting properties for all analytes bearing various functional groups. The precise extraction of RDCs in the range of up to ±30 Hz from F2-coupled HSQC spectra was possible. Additionally, the chiral environment led to diastereomorphous interactions with the enantiomers of chiral analytes leading to two different sets of RDCs. This differential order effect was particularly pronounced with H-bond donors like alcohols and 2° amines.
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Affiliation(s)
- Alexis Krupp
- Clemens Schöpf Institut for Organic Chemistry and Biochemistry, Technical University of Darmstadt, Darmstadt, Germany
- Nitrochemie Aschau GmbH, Aschau am Inn, Germany
| | - Markus Noll
- Clemens Schöpf Institut for Organic Chemistry and Biochemistry, Technical University of Darmstadt, Darmstadt, Germany
| | - Michael Reggelin
- Clemens Schöpf Institut for Organic Chemistry and Biochemistry, Technical University of Darmstadt, Darmstadt, Germany
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13
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da Silva DGB, Hallwass F, Navarro-Vázquez A. Single experiment measurement of residual dipolar couplings in aqueous solution using a biphasic bisperylene imide chromonic liquid crystal. MAGNETIC RESONANCE IN CHEMISTRY : MRC 2021; 59:408-413. [PMID: 33295034 DOI: 10.1002/mrc.5120] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/04/2020] [Revised: 12/01/2020] [Accepted: 12/06/2020] [Indexed: 06/12/2023]
Abstract
The use of the biphasic isotropic/nematic region in a bisperylene imide-based lyotropic liquid crystal system allows the extraction of proton-carbon 1 DCH residual dipolar couplings in aqueous solution from a single F1-coupled HSQC experiment. The method was successfully applied to the RDC-based conformational analysis of sucrose.
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Affiliation(s)
- Danilo G B da Silva
- Departamento de Química Fundamental, CCEN, Universidade Federal de Pernambuco, Recife, Pernambuco, Brazil
| | - Fernando Hallwass
- Departamento de Química Fundamental, CCEN, Universidade Federal de Pernambuco, Recife, Pernambuco, Brazil
| | - Armando Navarro-Vázquez
- Departamento de Química Fundamental, CCEN, Universidade Federal de Pernambuco, Recife, Pernambuco, Brazil
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14
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Sager E, Tzvetkova P, Gossert AD, Piechon P, Luy B. Determination of Configuration and Conformation of a Reserpine Derivative with Seven Stereogenic Centers Using Molecular Dynamics with RDC-Derived Tensorial Constraints*. Chemistry 2020; 26:14435-14444. [PMID: 32744785 PMCID: PMC7702126 DOI: 10.1002/chem.202002642] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2020] [Revised: 07/22/2020] [Indexed: 11/11/2022]
Abstract
NMR-based determination of the configuration of complex molecules containing many stereocenters is often not possible using traditional NOE data and coupling patterns. Making use of residual dipolar couplings (RDCs), we were able to determine the relative configuration of a natural product containing seven stereocenters, including a chiral amine lacking direct RDC data. To identify the correct relative configuration out of 32 possible ones, experimental RDCs were used in three different approaches for data interpretation: by fitting experimental data based singular value decomposition (SVD) using a single alignment tensor and either (i) a single conformer or (ii) multiple conformers, or alternatively (iii) using molecular dynamics simulations with tensorial orientational constraints (MDOC). Even though in all three approaches one and the same configuration could be selected and clear discrimination between possible configurations was achieved, the experimental data was not fully satisfied by the methods based on single tensor approaches. While these two approaches are faster, only MDOC is able to fully reproduce experimental results, as the obtained conformational ensemble adequately covers the conformational space necessary to describe the molecule with inherent flexibility.
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Affiliation(s)
- Emine Sager
- Institut für Organische ChemieKarlsruher Institut für Technologie (KIT)Fritz-Haber-Weg 676131KarlsruheGermany
- Novartis Pharma AGNovartis Institutes for Biomedical Research4002BaselSwitzerland
| | - Pavleta Tzvetkova
- Institut für Biologische Grenzflächen 4—Magnetische ResonanzKarlsruher Institut für Technologie (KIT)Postfach 364076021KarlsruheGermany
| | - Alvar D. Gossert
- Novartis Pharma AGNovartis Institutes for Biomedical Research4002BaselSwitzerland
- Institut für Molekularbiologie und BiophysikETH Zürich8093ZürichSwitzerland
| | - Philippe Piechon
- Novartis Pharma AGNovartis Institutes for Biomedical Research4002BaselSwitzerland
| | - Burkhard Luy
- Institut für Organische ChemieKarlsruher Institut für Technologie (KIT)Fritz-Haber-Weg 676131KarlsruheGermany
- Institut für Biologische Grenzflächen 4—Magnetische ResonanzKarlsruher Institut für Technologie (KIT)Postfach 364076021KarlsruheGermany
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15
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Qin S, Jiang Y, Sun H, Liu H, Zhang A, Lei X. Measurement of Residual Dipolar Couplings of Organic Molecules in Multiple Solvent Systems Using a Liquid‐Crystalline‐Based Medium. Angew Chem Int Ed Engl 2020. [DOI: 10.1002/ange.202007243] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Si‐Yong Qin
- Key Laboratory of Catalysis and Energy Materials Chemistry of Ministry of Education & Hubei Key Laboratory of Catalysis and Materials Science South-Central University for Nationalities Wuhan 430074 China
| | - Yan Jiang
- Key Laboratory of Catalysis and Energy Materials Chemistry of Ministry of Education & Hubei Key Laboratory of Catalysis and Materials Science South-Central University for Nationalities Wuhan 430074 China
| | - Han Sun
- Section of Structural Biology Leibniz-Forschungsinstitut für Molekulare Pharmakologie (FMP) 13125 Berlin Germany
| | - Han Liu
- School of Pharmaceutical Sciences South-Central University for Nationalities Wuhan 430074 China
| | - Ai‐Qing Zhang
- Key Laboratory of Catalysis and Energy Materials Chemistry of Ministry of Education & Hubei Key Laboratory of Catalysis and Materials Science South-Central University for Nationalities Wuhan 430074 China
| | - Xinxiang Lei
- Key Laboratory of Catalysis and Energy Materials Chemistry of Ministry of Education & Hubei Key Laboratory of Catalysis and Materials Science South-Central University for Nationalities Wuhan 430074 China
- School of Pharmaceutical Sciences South-Central University for Nationalities Wuhan 430074 China
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16
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Hamada H, Yanagi M, Shimoda K, Uchida N. Water-Soluble Glycosylated Resveratrol for Measuring Residual Dipolar Coupling in NMR. Nat Prod Commun 2020. [DOI: 10.1177/1934578x20947232] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022] Open
Abstract
Residual dipolar coupling (RDC) is a newly emerging technique for obtaining more precise conformational features of molecules in nuclear magnetic resonance (NMR), which can be observed when the molecules are oriented in NMR sample solutions. Unlike the case of solubilization of resveratrol (Res) in aqueous media by surfactants, multiglycosylated resveratrol (GlyRes) was dispersed in aqueous media forming nanoparticles with an extremely small size. In the presence of an NMR alignment medium of bacteriophage, GlyRes molecules were efficiently oriented in the strong magnetic field allowing for observations of RDCs in NMR. Structural refinement using the observed RDC values enabled differentiation of trans and cis forms of Res.
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Affiliation(s)
- Hiroki Hamada
- Department of Life Science, Faculty of Science, Okayama University of Science, Kita-ku, Japan
| | - Masayoshi Yanagi
- Department of Life Science, Faculty of Science, Okayama University of Science, Kita-ku, Japan
| | - Kei Shimoda
- Department of Biomedical Chemistry, Faculty of Medicine, Oita University, Hasama-machi, Japan
| | - Noriyuki Uchida
- RIKEN Center for Emergent Matter Science, Wako, Saitama, Japan
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17
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Qin S, Jiang Y, Sun H, Liu H, Zhang A, Lei X. Measurement of Residual Dipolar Couplings of Organic Molecules in Multiple Solvent Systems Using a Liquid‐Crystalline‐Based Medium. Angew Chem Int Ed Engl 2020; 59:17097-17103. [DOI: 10.1002/anie.202007243] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/19/2020] [Indexed: 01/08/2023]
Affiliation(s)
- Si‐Yong Qin
- Key Laboratory of Catalysis and Energy Materials Chemistry of Ministry of Education & Hubei Key Laboratory of Catalysis and Materials Science South-Central University for Nationalities Wuhan 430074 China
| | - Yan Jiang
- Key Laboratory of Catalysis and Energy Materials Chemistry of Ministry of Education & Hubei Key Laboratory of Catalysis and Materials Science South-Central University for Nationalities Wuhan 430074 China
| | - Han Sun
- Section of Structural Biology Leibniz-Forschungsinstitut für Molekulare Pharmakologie (FMP) 13125 Berlin Germany
| | - Han Liu
- School of Pharmaceutical Sciences South-Central University for Nationalities Wuhan 430074 China
| | - Ai‐Qing Zhang
- Key Laboratory of Catalysis and Energy Materials Chemistry of Ministry of Education & Hubei Key Laboratory of Catalysis and Materials Science South-Central University for Nationalities Wuhan 430074 China
| | - Xinxiang Lei
- Key Laboratory of Catalysis and Energy Materials Chemistry of Ministry of Education & Hubei Key Laboratory of Catalysis and Materials Science South-Central University for Nationalities Wuhan 430074 China
- School of Pharmaceutical Sciences South-Central University for Nationalities Wuhan 430074 China
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18
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Köck M, Reggelin M, Immel S. The Advanced Floating Chirality Distance Geometry Approach-How Anisotropic NMR Parameters Can Support the Determination of the Relative Configuration of Natural Products. Mar Drugs 2020; 18:md18060330. [PMID: 32599876 PMCID: PMC7344786 DOI: 10.3390/md18060330] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/04/2020] [Revised: 06/16/2020] [Accepted: 06/18/2020] [Indexed: 11/16/2022] Open
Abstract
The configurational analysis of complex natural products by NMR spectroscopy is still a challenging task. The assignment of the relative configuration is usually carried out by analysis of interproton distances from NOESY or ROESY spectra (qualitative or quantitative) and scalar (J) couplings. About 15 years ago, residual dipolar couplings (RDCs) were introduced as a tool for the configurational determination of small organic molecules. In contrast to NOEs/ROEs which are local parameters (distances up to 400 pm can be detected for small organic molecules), RDCs are global parameters which allow to obtain structural information also from long-range relationships. RDCs have the disadvantage that the sample needs a setup in an alignment medium in order to obtain the required anisotropic environment. Here, we will discuss the configurational analysis of five complex natural products: axinellamine A (1), tetrabromostyloguanidine (2), 3,7-epi-massadine chloride (3), tubocurarine (4), and vincristine (5). Compounds 1-3 are marine natural products whereas 4 and 5 are from terrestrial sources. The chosen examples will carefully work out the limitations of NOEs/ROEs in the configurational analysis of natural products and will also provide an outlook on the information obtained from RDCs.
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Affiliation(s)
- Matthias Köck
- Alfred-Wegener-Institut für Polar-und Meeresforschung in der Helmholtz-Gemeinschaft, Am Handelshafen 12, 27570 Bremerhaven, Germany
| | - Michael Reggelin
- Clemens-Schöpf-Institut für Organische Chemie und Biochemie, Technische Universität Darmstadt, Alarich-Weiss-Straße 4, 64287 Darmstadt, Germany
| | - Stefan Immel
- Clemens-Schöpf-Institut für Organische Chemie und Biochemie, Technische Universität Darmstadt, Alarich-Weiss-Straße 4, 64287 Darmstadt, Germany
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19
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Liu H, Chen P, Li XL, Sun H, Lei X. Practical aspects of oligopeptide AAKLVFF as an alignment medium for the measurements of residual dipolar coupling of organic molecules. MAGNETIC RESONANCE IN CHEMISTRY : MRC 2020; 58:404-410. [PMID: 32239576 DOI: 10.1002/mrc.4825] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/29/2018] [Revised: 12/03/2018] [Accepted: 12/26/2018] [Indexed: 06/11/2023]
Abstract
Practical aspects of the oligopeptide AAKLVFF as an alignment medium are discussed, including large-scale synthesis of the oligopeptide, detailed description of preparation of the alignment medium, and acquisition of the RDCs. The resulting orienting medium is stable and highly homogeneous with tunable alignment strength in methanol.
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Affiliation(s)
- Han Liu
- School of Pharmaceutical Sciences, South Central University for Nationalities, Wuhan, China
| | - Pian Chen
- School of Pharmaceutical Sciences, South Central University for Nationalities, Wuhan, China
| | - Xiao-Lu Li
- Department of Structural Biology, Leibniz-Institut für Molekulare Pharmakologie (FMP), Berlin, Germany
| | - Han Sun
- Department of Structural Biology, Leibniz-Institut für Molekulare Pharmakologie (FMP), Berlin, Germany
| | - Xinxiang Lei
- School of Pharmaceutical Sciences, South Central University for Nationalities, Wuhan, China
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20
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Ma ZK, Han XY, Liu H, Ji JC, Qin SY, Li XD, Lei X. Lyotropic liquid crystal to measure residual dipolar couplings in dimethyl sulfoxide based on modified cellulose nanocrystals. NEW J CHEM 2020. [DOI: 10.1039/c9nj06031f] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A novel lyotropic liquid crystal was developed for the measurement of RDCs of organic molecules with no background signals.
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Affiliation(s)
- Zong-Kai Ma
- Key Laboratory of Catalysis and Energy Materials Chemistry of Ministry of Education & Hubei Key Laboratory of Catalysis and Materials Science
- South-Central University for Nationalities
- Wuhan 430074
- P. R. China
| | - Xiao-Yang Han
- School of Pharmaceutical Sciences
- South-Central University for Nationalities
- Wuhan
- P. R. China
| | - Han Liu
- School of Pharmaceutical Sciences
- South-Central University for Nationalities
- Wuhan
- P. R. China
| | - Jia-Cheng Ji
- School of Pharmaceutical Sciences
- South-Central University for Nationalities
- Wuhan
- P. R. China
| | - Si-Yong Qin
- Key Laboratory of Catalysis and Energy Materials Chemistry of Ministry of Education & Hubei Key Laboratory of Catalysis and Materials Science
- South-Central University for Nationalities
- Wuhan 430074
- P. R. China
| | - Xiang-Dan Li
- Key Laboratory of Catalysis and Energy Materials Chemistry of Ministry of Education & Hubei Key Laboratory of Catalysis and Materials Science
- South-Central University for Nationalities
- Wuhan 430074
- P. R. China
| | - Xinxiang Lei
- School of Pharmaceutical Sciences
- South-Central University for Nationalities
- Wuhan
- P. R. China
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21
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Tzvetkova P, Sternberg U, Gloge T, Navarro-Vázquez A, Luy B. Configuration determination by residual dipolar couplings: accessing the full conformational space by molecular dynamics with tensorial constraints. Chem Sci 2019; 10:8774-8791. [PMID: 31803450 PMCID: PMC6849632 DOI: 10.1039/c9sc01084j] [Citation(s) in RCA: 28] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/04/2019] [Accepted: 07/19/2019] [Indexed: 12/27/2022] Open
Abstract
Residual dipolar couplings (RDCs) and other residual anisotropic NMR parameters provide valuable structural information of high quality and quantity, bringing detailed structural models of flexible molecules in solution in reach. The corresponding data interpretation so far is directly or indirectly based on the concept of a molecular alignment tensor, which, however, is ill-defined for flexible molecules. The concept is typically applied to a single or a small set of lowest energy structures, ignoring the effect of vibrational averaging. Here, we introduce an entirely different approach based on time averaged molecular dynamics with dipolar couplings as tensorial orientational restraints that can be used to solve structural problems in molecules of any size without the need of introducing an explicit molecular alignment tensor into the computation. RDC restraints are represented by their full 3D interaction tensor in the laboratory frame, for which pseudo forces are calculated using a secular dipolar Hamiltonian as the target. The resulting rotational averaging of each individual tensorial restraint leads to structural ensembles that best fulfil the experimental data. Using one-bond RDCs, the approach has been implemented in the force field procedures of the program COSMOS and extensively tested. A concise theoretical introduction, including the special treatment of force fields for stable and fast MD simulations, as well as applications regarding configurational analyses of small to medium-sized organic molecules with different degrees of flexibility, is given. The observed results are discussed in detail.
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Affiliation(s)
- Pavleta Tzvetkova
- Institute of Organic Chemistry and Institute for Biological Interfaces 4 - Magnetic Resonance , Karlsruhe Institute of Technology (KIT) , Fritz-Haber-Weg 6 , 76131 Karlsruhe , Germany . ;
| | - Ulrich Sternberg
- Institute of Organic Chemistry and Institute for Biological Interfaces 4 - Magnetic Resonance , Karlsruhe Institute of Technology (KIT) , Fritz-Haber-Weg 6 , 76131 Karlsruhe , Germany . ;
| | - Thomas Gloge
- Institute of Organic Chemistry and Institute for Biological Interfaces 4 - Magnetic Resonance , Karlsruhe Institute of Technology (KIT) , Fritz-Haber-Weg 6 , 76131 Karlsruhe , Germany . ;
| | - Armando Navarro-Vázquez
- Institute of Organic Chemistry and Institute for Biological Interfaces 4 - Magnetic Resonance , Karlsruhe Institute of Technology (KIT) , Fritz-Haber-Weg 6 , 76131 Karlsruhe , Germany . ;
| | - Burkhard Luy
- Institute of Organic Chemistry and Institute for Biological Interfaces 4 - Magnetic Resonance , Karlsruhe Institute of Technology (KIT) , Fritz-Haber-Weg 6 , 76131 Karlsruhe , Germany . ;
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22
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Application of anisotropic NMR parameters to the confirmation of molecular structure. Nat Protoc 2018; 14:217-247. [DOI: 10.1038/s41596-018-0091-9] [Citation(s) in RCA: 65] [Impact Index Per Article: 10.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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23
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Niklas T, Schulze P, Farès C. Cromolyn/gelatin mixtures as aqueous alignment media and utilization of their mechanical stability for a layering technique. MAGNETIC RESONANCE IN CHEMISTRY : MRC 2018; 56:1176-1182. [PMID: 30091791 DOI: 10.1002/mrc.4786] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/19/2018] [Revised: 07/26/2018] [Accepted: 07/27/2018] [Indexed: 06/08/2023]
Abstract
In this study, aqueous blends of cromolyn and gelatin ("cromogels") are introduced as anisotropic media. The addition of gelatin enables an advantageous adjustability of the strength, the homogeneity, and the stability of the cromolyn alignment. The mechanical stability of these polymer-dispersed liquid crystals is further utilized by stacking layers of D2 O/cromolyn/gelatin with varying component ratio. The resulting distinct phases with correspondingly different degrees of alignment can be targeted by spatially resolved NMR techniques. As a case study, we investigated sucrose in a two-phase system with neat D2 O and analyte layered over the anisotropic medium. A recently presented spatially selective coupled-type HSQC experiment allows the determination of one-bond C-H splitting in both phases.
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Affiliation(s)
- Thomas Niklas
- Chromatography Department, Max-Planck-Institut für Kohlenforschung, Mülheim an der Ruhr, Germany
- NMR Department, Max-Planck-Institut für Kohlenforschung, Mülheim an der Ruhr, Germany
| | - Philipp Schulze
- Chromatography Department, Max-Planck-Institut für Kohlenforschung, Mülheim an der Ruhr, Germany
| | - Christophe Farès
- NMR Department, Max-Planck-Institut für Kohlenforschung, Mülheim an der Ruhr, Germany
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24
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Li GW, Liu H, Qiu F, Wang XJ, Lei XX. Residual Dipolar Couplings in Structure Determination of Natural Products. NATURAL PRODUCTS AND BIOPROSPECTING 2018; 8:279-295. [PMID: 29943349 PMCID: PMC6102172 DOI: 10.1007/s13659-018-0174-x] [Citation(s) in RCA: 45] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/28/2018] [Accepted: 06/14/2018] [Indexed: 05/16/2023]
Abstract
The determination of natural products stereochemistry remains a formidable task. Residual dipolar couplings (RDCs) induced by anisotropic media are a powerful tool for determination of the stereochemistry of organic molecule in solution. This review will provide a short introduction on RDCs-based methodology for the structural elucidation of natural products. Special attention is given to the current availability of alignment media in organic solvents. The applications of RDCs for structural analysis of some examples of natural products were discussed and summarized. This review provides a short introduction on RDCs-based methodology for the structural elucidation of natural products. Special attention is given to the current availability of alignment media in organic solvents. The applications of RDCs for structural analysis of some examples of natural products were discussed and summarized.
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Affiliation(s)
- Gao-Wei Li
- College of Chemistry and Chemical Engineering, Shangqiu Normal University, Shangqiu, 476000, People's Republic of China
| | - Han Liu
- School of Pharmaceutical Sciences, South Central University for Nationalities, Wuhan, 430074, People's Republic of China
| | - Feng Qiu
- School of Pharmaceutical Sciences, South Central University for Nationalities, Wuhan, 430074, People's Republic of China
| | - Xiao-Juan Wang
- College of Chemistry and Chemical Engineering, Shangqiu Normal University, Shangqiu, 476000, People's Republic of China
| | - Xin-Xiang Lei
- School of Pharmaceutical Sciences, South Central University for Nationalities, Wuhan, 430074, People's Republic of China.
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25
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Liu Y, Cohen RD, Martin GE, Williamson RT. A practical strategy for the accurate measurement of residual dipolar couplings in strongly aligned small molecules. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 2018; 291:63-72. [PMID: 29723716 DOI: 10.1016/j.jmr.2018.04.002] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/22/2018] [Revised: 04/05/2018] [Accepted: 04/05/2018] [Indexed: 06/08/2023]
Abstract
Accurate measurement of residual dipolar couplings (RDCs) requires an appropriate degree of alignment in order to optimize data quality. An overly weak alignment yields very small anisotropic data that are susceptible to measurement errors, whereas an overly strong alignment introduces extensive anisotropic effects that severely degrade spectral quality. The ideal alignment amplitude also depends on the specific pulse sequence used for the coupling measurement. In this work, we introduce a practical strategy for the accurate measurement of one-bond 13C-1H RDCs up to a range of ca. -300 to +300 Hz, corresponding to an alignment that is an order of magnitude stronger than typically employed for small molecule structural elucidation. This strong alignment was generated in the mesophase of the commercially available poly-γ-(benzyl-L-glutamate) polymer. The total coupling was measured by the simple and well-studied heteronuclear two-dimensional J-resolved experiment, which performs well in the presence of strong anisotropic effects. In order to unequivocally determine the sign of the total coupling and resolve ambiguities in assigning total couplings in the CH2 group, coupling measurements were conducted at an isotropic condition plus two anisotropic conditions of different alignment amplitudes. Most RDCs could be readily extracted from these measurements whereas more complicated spectral effects resulting from strong homonuclear coupling could be interpreted either theoretically or by simulation. Importantly, measurement of these very large RDCs actually offers significantly improved data quality and utility for the structure determination of small organic molecules.
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Affiliation(s)
- Yizhou Liu
- Structure Elucidation Group, Process and Analytical Research and Development, Merck & Co. Inc., 126 East Lincoln Avenue, Rahway, NJ 07065, USA.
| | - Ryan D Cohen
- Structure Elucidation Group, Process and Analytical Research and Development, Merck & Co. Inc., 126 East Lincoln Avenue, Rahway, NJ 07065, USA
| | - Gary E Martin
- Structure Elucidation Group, Process and Analytical Research and Development, Merck & Co. Inc., 126 East Lincoln Avenue, Rahway, NJ 07065, USA
| | - R Thomas Williamson
- Structure Elucidation Group, Process and Analytical Research and Development, Merck & Co. Inc., 126 East Lincoln Avenue, Rahway, NJ 07065, USA
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26
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Lei X, Qiu F, Sun H, Bai L, Wang WX, Xiang W, Xiao H. A Self-Assembled Oligopeptide as a Versatile NMR Alignment Medium for the Measurement of Residual Dipolar Couplings in Methanol. Angew Chem Int Ed Engl 2017; 56:12857-12861. [PMID: 28834640 DOI: 10.1002/anie.201705123] [Citation(s) in RCA: 38] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/18/2017] [Revised: 08/11/2017] [Indexed: 11/10/2022]
Abstract
Residual dipolar coupling (RDC) is a powerful structural parameter for the determination of the constitution, conformation, and configuration of organic molecules. Herein, we report the first liquid crystal-based orienting medium that is compatible with MeOH, thus enabling RDC acquisitions of a wide range of intermediate to polar organic molecules. The liquid crystals were produced from self-assembled oligopeptide nanotubes (AAKLVFF), which are stable at very low concentrations. The presented alignment medium is highly homogeneous, and the size of RDCs can be scaled with the concentration of the peptide. To assess the accuracy of the RDC measurement by employing this new medium, seven bioactive natural products from different classes were chosen and analyzed. The straightforward preparation of the anisotropic alignment sample will offer a versatile and robust protocol for the routine RDC measurement of natural products.
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Affiliation(s)
- Xinxiang Lei
- School of Pharmaceutical Sciences, South Central University for Nationalities, Wuhan, 430074, P. R. China
| | - Feng Qiu
- School of Pharmaceutical Sciences, South Central University for Nationalities, Wuhan, 430074, P. R. China
| | - Han Sun
- Leibniz-Institut für Molekulare Pharmakologie (FMP), Robert-Roessle-Strasse 10, 13125, Berlin, Germany
| | - Liwen Bai
- School of Pharmaceutical Sciences, South Central University for Nationalities, Wuhan, 430074, P. R. China
| | - Wen-Xuan Wang
- School of Pharmaceutical Sciences, South Central University for Nationalities, Wuhan, 430074, P. R. China
| | - Wensheng Xiang
- School of Life Science, Northeast Agricultural University, Harbin, Heilongjiang Province, 150030, China
| | - Hongping Xiao
- College of Chemistry & Materials Engineering, Wenzhou University, Wenzhou, 325035, P. R. China
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27
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Lei X, Qiu F, Sun H, Bai L, Wang WX, Xiang W, Xiao H. A Self-Assembled Oligopeptide as a Versatile NMR Alignment Medium for the Measurement of Residual Dipolar Couplings in Methanol. Angew Chem Int Ed Engl 2017. [DOI: 10.1002/ange.201705123] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Affiliation(s)
- Xinxiang Lei
- School of Pharmaceutical Sciences; South Central University for Nationalities; Wuhan 430074 P. R. China
| | - Feng Qiu
- School of Pharmaceutical Sciences; South Central University for Nationalities; Wuhan 430074 P. R. China
| | - Han Sun
- Leibniz-Institut für Molekulare Pharmakologie (FMP); Robert-Roessle-Strasse 10 13125 Berlin Germany
| | - Liwen Bai
- School of Pharmaceutical Sciences; South Central University for Nationalities; Wuhan 430074 P. R. China
| | - Wen-Xuan Wang
- School of Pharmaceutical Sciences; South Central University for Nationalities; Wuhan 430074 P. R. China
| | - Wensheng Xiang
- School of Life Science; Northeast Agricultural University; Harbin Heilongjiang Province 150030 China
| | - Hongping Xiao
- College of Chemistry & Materials Engineering; Wenzhou University; Wenzhou 325035 P. R. China
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28
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Li GW, Cao JM, Zong W, Hu L, Hu ML, Lei X, Sun H, Tan RX. Helical Polyisocyanopeptides as Lyotropic Liquid Crystals for Measuring Residual Dipolar Couplings. Chemistry 2017; 23:7653-7656. [DOI: 10.1002/chem.201700539] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/06/2017] [Indexed: 11/06/2022]
Affiliation(s)
- Gao-Wei Li
- Institute of Functional Biomolecules; State Key Laboratory of Pharmaceutical Biotechnology; Nanjing University; Nanjing 210093 P. R. China
| | - Jiang-Ming Cao
- Institute of Functional Biomolecules; State Key Laboratory of Pharmaceutical Biotechnology; Nanjing University; Nanjing 210093 P. R. China
| | - Wen Zong
- College of Chemistry & Materials Engineering; Wenzhou University; Wenzhou 325035 P. R. China
| | - Li Hu
- College of Chemistry & Materials Engineering; Wenzhou University; Wenzhou 325035 P. R. China
| | - Mao-Lin Hu
- College of Chemistry & Materials Engineering; Wenzhou University; Wenzhou 325035 P. R. China
| | - Xinxiang Lei
- School of Pharmaceutical Sciences; South Central University for Nationalities; Wuhan 430074 P. R. China
- College of Chemistry & Materials Engineering; Wenzhou University; Wenzhou 325035 P. R. China
| | - Han Sun
- Leibniz-Institut für Molekulare Pharmakologie (FMP); Robert-Roessle-Strasse 10 13125 Berlin Germany
| | - Ren Xiang Tan
- Institute of Functional Biomolecules; State Key Laboratory of Pharmaceutical Biotechnology; Nanjing University; Nanjing 210093 P. R. China
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29
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Liu Y, Xu Z, Gao W, Cheng Z, Gao C. Graphene and Other 2D Colloids: Liquid Crystals and Macroscopic Fibers. ADVANCED MATERIALS (DEERFIELD BEACH, FLA.) 2017; 29:1606794. [PMID: 28233348 DOI: 10.1002/adma.201606794] [Citation(s) in RCA: 41] [Impact Index Per Article: 5.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/15/2016] [Revised: 01/19/2017] [Indexed: 06/06/2023]
Abstract
Two-dimensional colloidal nanomaterials are running into renaissance after the enlightening researches of graphene. Macroscopic one-dimensional fiber is an optimal ordered structural form to express the in-plane merits of 2D nanomaterials, and the formation of liquid crystals (LCs) allows the creation of continuous fibers. In the correlated system from LCs to fibers, understanding their macroscopic organizing behavior and transforming them into new solid fibers is greatly significant for applications. Herein, we retrospect the history of 2D colloids and discuss about the concept of 2D nanomaterial fibers in the context of LCs, elaborating the motivation, principle and possible strategies of fabrication. Then we highlight the creation, development and typical applications of graphene fibers. Additionally, the latest advances of other 2D nanomaterial fibers are also summarized. Finally, conclusions, challenges and perspectives are provided to show great expectations of better and more fibrous materials of 2D nanomaterials. This review gives a comprehensive retrospect of the past century-long effort about the whole development of 2D colloids, and plots a clear roadmap - "lamellar solid - LCs - macroscopic fibers - flexible devices", which will certainly open a new era of structural-multifunctional application for the conventional 2D colloids.
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Affiliation(s)
- Yingjun Liu
- MOE Key Laboratory of Macromolecular Synthesis and Functionalization, Department of Polymer Science and Engineering, Key Laboratory of Adsorption and Separation Materials & Technologies of Zhejiang Province, Zhejiang University, 38 Zheda Road, Hangzhou, 310027, P. R. China
| | - Zhen Xu
- MOE Key Laboratory of Macromolecular Synthesis and Functionalization, Department of Polymer Science and Engineering, Key Laboratory of Adsorption and Separation Materials & Technologies of Zhejiang Province, Zhejiang University, 38 Zheda Road, Hangzhou, 310027, P. R. China
| | - Weiwei Gao
- MOE Key Laboratory of Macromolecular Synthesis and Functionalization, Department of Polymer Science and Engineering, Key Laboratory of Adsorption and Separation Materials & Technologies of Zhejiang Province, Zhejiang University, 38 Zheda Road, Hangzhou, 310027, P. R. China
| | - Zhengdong Cheng
- Arti McFerrin Department of Chemical Engineering and Department of Materials Science and Engineering, Texas A&M University, College Station, TX, 77843, USA
| | - Chao Gao
- MOE Key Laboratory of Macromolecular Synthesis and Functionalization, Department of Polymer Science and Engineering, Key Laboratory of Adsorption and Separation Materials & Technologies of Zhejiang Province, Zhejiang University, 38 Zheda Road, Hangzhou, 310027, P. R. China
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30
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França JAA, Navarro-Vázquez A, Lei X, Sun H, Griesinger C, Hallwass F. Complete NMR assignment and conformational analysis of 17-α-ethinylestradiol by using RDCs obtained in grafted graphene oxide. MAGNETIC RESONANCE IN CHEMISTRY : MRC 2017; 55:297-303. [PMID: 27637176 DOI: 10.1002/mrc.4526] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/01/2016] [Revised: 09/08/2016] [Accepted: 09/13/2016] [Indexed: 06/06/2023]
Abstract
The 1 H and 13 C NMR spectra of 17-α-ethinylestradiol (EE2), a well-known contraceptive, including diastereotopic methylene groups, were fully assigned with the help of residual dipolar couplings (RDC) measured in the recently developed grafted graphene oxide orienting medium. RDC analysis, which included all 1 DCH couplings and the long-range 2 DCH1 H-C≡13 C coupling, also pointed to the presence of a minor conformation arising from pseudo-rotation of the steroid B ring. Saturation-transfer difference (STD) measurements revealed that the most likely interaction between EE2 and orienting medium occurred on the C and D ring. Copyright © 2016 John Wiley & Sons, Ltd.
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Affiliation(s)
- José A A França
- Instituto Federal de Alagoas, Campus Piranhas, Avenida Sergipe, s/n° Xingó, 57460-000, Piranhas, AL, Brazil
| | - Armando Navarro-Vázquez
- Departamento de Química Fundamental, Universidade Federal de Pernambuco, Avenida Professor Moraes Rego, 1235, Cidade Universitária, 50670-901, Recife, PE, Brazil
| | - Xinxiang Lei
- School of Pharmaceutical Sciences, South Central University for Nationalities, Wuhan, 430074, PR China
| | - Han Sun
- Leibniz-Institut für Molekulare Pharmakologie (FMP), Robert-Robert-Rössle-StraΒe 10, 13125, Berlin, Germany
| | - Christian Griesinger
- Department of NMR-based Structural Biology, Max Planck Institute for Biophysical Chemistry, Fassberg 11, 37077, Göttingen, Germany
| | - Fernando Hallwass
- Departamento de Química Fundamental, Universidade Federal de Pernambuco, Avenida Professor Moraes Rego, 1235, Cidade Universitária, 50670-901, Recife, PE, Brazil
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31
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García ME, Woodruff SR, Hellemann E, Tsarevsky NV, Gil RR. Di(ethylene glycol) methyl ether methacrylate (DEGMEMA)-derived gels align small organic molecules in methanol. MAGNETIC RESONANCE IN CHEMISTRY : MRC 2017; 55:206-209. [PMID: 26763068 DOI: 10.1002/mrc.4400] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/06/2015] [Revised: 10/20/2015] [Accepted: 11/24/2015] [Indexed: 05/28/2023]
Abstract
Residual dipolar couplings (RDCs) constitute an important NMR parameter for structural elucidation in all areas of chemistry. In this study, di(ethylene glycol) methyl ether methacrylate (DEGMEMA)-based gels are introduced as alignment media for the measurement of RDCs of small organic molecules in polar solvents such as methanol. The low viscosity of methanol permits the execution of J-scaled BIRD HSQC experiments that yield very sharp lines in anisotropic conditions. The gels have excellent mechanical properties, and their compression and expansion in the swollen state can be reversed and performed multiple times. This process enables the easy loading and release of analytes. The excellent performance of these new aligning gels is demonstrated by analyzing the structure of the alkaloid retrorsine. Copyright © 2016 John Wiley & Sons, Ltd.
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Affiliation(s)
- Manuela E García
- Department of Chemistry, Carnegie Mellon University, 4400 Fifth Avenue, Pittsburgh, PA, 15213, USA
- Department of Organic Chemistry, National University of Cordoba, Medina Allende y Haya de La Torre, Cordoba, 5000, Argentina
| | - Shannon R Woodruff
- Department of Chemistry, Southern Methodist University, Dallas, TX, USA
- Center for Drug Discovery, Design, and Delivery in Dedman College, Southern Methodist University, Dallas, TX, USA
| | - Erich Hellemann
- Department of Chemistry, Carnegie Mellon University, 4400 Fifth Avenue, Pittsburgh, PA, 15213, USA
| | - Nicolay V Tsarevsky
- Department of Chemistry, Southern Methodist University, Dallas, TX, USA
- Center for Drug Discovery, Design, and Delivery in Dedman College, Southern Methodist University, Dallas, TX, USA
| | - Roberto R Gil
- Department of Chemistry, Carnegie Mellon University, 4400 Fifth Avenue, Pittsburgh, PA, 15213, USA
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32
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Šoral M, Markus J, Doháňošová J, Šoralová S, Dvoranová D, Chyba A, Moncol J, Berkeš D, Liptaj T. An unexpected reaction pathway in the synthesis of the ABCE framework of strychnine-type alkaloids – A multidisciplinary study. J Mol Struct 2017. [DOI: 10.1016/j.molstruc.2016.08.014] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
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33
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Schmidts V. Perspectives in the application of residual dipolar couplings in the structure elucidation of weakly aligned small molecules. MAGNETIC RESONANCE IN CHEMISTRY : MRC 2017; 55:54-60. [PMID: 27743456 DOI: 10.1002/mrc.4543] [Citation(s) in RCA: 54] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/12/2016] [Revised: 10/10/2016] [Accepted: 10/13/2016] [Indexed: 05/28/2023]
Abstract
This perspective article aims to review the general methodology in the application of residual dipolar couplings (RDCs) in the structure elucidation of small molecules and give the author's view on challenges for future applications. Recent improvements in the availability of alignment media, new pulse sequences for the measurement of couplings and improvements in the analysis software have garnered widespread interest in the technique. However, further generalization is needed in order to make RDC analysis into a truly "routine" method. Copyright © 2016 John Wiley & Sons, Ltd.
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Affiliation(s)
- Volker Schmidts
- Clemens-Schöpf-Institut für Organische Chemie und Biochemie, Technische Universität Darmstadt, Darmstadt, Germany
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34
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Wu J, Zhang Q, Zhou A, Huang Z, Bai H, Li L. Phase-Separated Polyaniline/Graphene Composite Electrodes for High-Rate Electrochemical Supercapacitors. ADVANCED MATERIALS (DEERFIELD BEACH, FLA.) 2016; 28:10211-10216. [PMID: 27723115 DOI: 10.1002/adma.201601153] [Citation(s) in RCA: 51] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/28/2016] [Revised: 08/26/2016] [Indexed: 06/06/2023]
Abstract
Polyaniline/graphene hydrogel composites with a macroscopically phase-separated structure are prepared. The composites show high specific capacitance and excellent rate performance. Further investigation demonstrates that polyaniline inside the graphene hydrogel has low rate performance, thus a phase-separated structure, in which polyaniline is mainly outside the graphene hydrogel matrix, can enhance the rate performance of the composites.
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Affiliation(s)
- Jifeng Wu
- College of Materials, Xiamen University, Xiamen, 361005, P. R. China
| | - Qin'e Zhang
- College of Materials, Xiamen University, Xiamen, 361005, P. R. China
| | - An'an Zhou
- College of Materials, Xiamen University, Xiamen, 361005, P. R. China
| | - Zhifeng Huang
- College of Materials, Xiamen University, Xiamen, 361005, P. R. China
| | - Hua Bai
- College of Materials, Xiamen University, Xiamen, 361005, P. R. China
| | - Lei Li
- College of Materials, Xiamen University, Xiamen, 361005, P. R. China
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35
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Castañar L, Garcia M, Hellemann E, Nolis P, Gil RR, Parella T. One-Shot Determination of Residual Dipolar Couplings: Application to the Structural Discrimination of Small Molecules Containing Multiple Stereocenters. J Org Chem 2016; 81:11126-11131. [DOI: 10.1021/acs.joc.6b02103] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Laura Castañar
- Servei
de Ressonància Magnètica Nuclear, Universitat Autònoma de Barcelona, E-08193 Bellaterra (Barcelona), Catalonia, Spain
| | - Manuela Garcia
- Department
of Chemistry, Carnegie Mellon University, Pittsburgh, Pennsylvania 15213, United States
| | - Erich Hellemann
- Department
of Chemistry, Carnegie Mellon University, Pittsburgh, Pennsylvania 15213, United States
| | - Pau Nolis
- Servei
de Ressonància Magnètica Nuclear, Universitat Autònoma de Barcelona, E-08193 Bellaterra (Barcelona), Catalonia, Spain
| | - Roberto R. Gil
- Department
of Chemistry, Carnegie Mellon University, Pittsburgh, Pennsylvania 15213, United States
| | - Teodor Parella
- Servei
de Ressonància Magnètica Nuclear, Universitat Autònoma de Barcelona, E-08193 Bellaterra (Barcelona), Catalonia, Spain
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36
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Hellemann E, Teles RR, Hallwass F, Barros W, Navarro-Vázquez A, Gil RR. Mechanical Behavior of Polymer Gels for RDCs and RCSAs Collection: NMR Imaging Study of Buckling Phenomena. Chemistry 2016; 22:16632-16635. [DOI: 10.1002/chem.201603333] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/13/2016] [Indexed: 11/11/2022]
Affiliation(s)
- Erich Hellemann
- Department of Chemistry; Carnegie Mellon University; 4400 Fifth Ave. Pittsburgh PA 15213 USA
| | - Rubens R. Teles
- Departamento de Química Fundamental; Universidade Federal de Pernambuco; Cidade Universitária CEP,50.740-540 Recife, PE Brazil
| | - Fernando Hallwass
- Departamento de Química Fundamental; Universidade Federal de Pernambuco; Cidade Universitária CEP,50.740-540 Recife, PE Brazil
| | - W. Barros
- Departamento de Física; Universidade Federal de Pernambuco; Cidade Universitária CEP,50.740-540 Recife, PE Brazil
| | - Armando Navarro-Vázquez
- Departamento de Química Fundamental; Universidade Federal de Pernambuco; Cidade Universitária CEP,50.740-540 Recife, PE Brazil
| | - Roberto R. Gil
- Department of Chemistry; Carnegie Mellon University; 4400 Fifth Ave. Pittsburgh PA 15213 USA
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37
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Nath N, Schmidt M, Gil RR, Williamson RT, Martin GE, Navarro-Vázquez A, Griesinger C, Liu Y. Determination of Relative Configuration from Residual Chemical Shift Anisotropy. J Am Chem Soc 2016; 138:9548-56. [DOI: 10.1021/jacs.6b04082] [Citation(s) in RCA: 72] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Nilamoni Nath
- Department
of NMR-based Structural Biology, Max Planck Institute for Biophysical Chemistry, 37077 Göttingen, Germany
| | - Manuel Schmidt
- Department
of NMR-based Structural Biology, Max Planck Institute for Biophysical Chemistry, 37077 Göttingen, Germany
| | - Roberto R. Gil
- Department
of Chemistry, Carnegie Mellon University, 4400 Fifth Avenue, Pittsburgh, Pennsylvania 15213, United States
| | - R. Thomas Williamson
- Process Research and Development, NMR Structure Elucidation Group, Merck & Co., Inc., 126 E Lincoln Avenue, Rahway, New Jersey 07065, United States
| | - Gary E. Martin
- Process Research and Development, NMR Structure Elucidation Group, Merck & Co., Inc., 126 E Lincoln Avenue, Rahway, New Jersey 07065, United States
| | - Armando Navarro-Vázquez
- Departamento
de Química Fundamental, Universidade Federal de Pernambuco, Cidade Universitária, Recife, PE 50740-560, Brazil
- Institute
of Organic Chemistry and Institute for Biological Interfaces Karlsruhe, Institute of Technology (KIT), Fritz-Haber-Weg 6, 76131 Karlsruhe, Germany
| | - Christian Griesinger
- Department
of NMR-based Structural Biology, Max Planck Institute for Biophysical Chemistry, 37077 Göttingen, Germany
| | - Yizhou Liu
- Process Research and Development, NMR Structure Elucidation Group, Merck & Co., Inc., 126 E Lincoln Avenue, Rahway, New Jersey 07065, United States
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38
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Tzvetkova P, Luy B. Q.E.COSY: determining sign and size of small deuterium residual quadrupolar couplings using an extended E.COSY principle. MAGNETIC RESONANCE IN CHEMISTRY : MRC 2016; 54:351-357. [PMID: 26763050 DOI: 10.1002/mrc.4386] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/07/2015] [Revised: 09/30/2015] [Accepted: 10/23/2015] [Indexed: 06/05/2023]
Abstract
Residual quadrupolar couplings contain important structural information comparable with residual dipolar couplings. However, the measurement of sign and size of especially small residual quadrupolar couplings is difficult. Here, we present an extension of the E.COSY principle to spin systems consisting of a Spin 1 coupled to a spin ½ nucleus, which allows the determination of the sign of the quadrupolar coupling of the Spin 1 nucleus relative to the heteronuclear coupling between the spins. The so-called Q.E.COSY approach is demonstrated with its sign-sensitivity using variable angle NMR, stretched gels and liquid crystalline phases applied to various CD and CD3 groups. Especially the sign-sensitive measurement of residual quadrupolar couplings that remain unresolved in conventional deuterium 1D spectra is shown.
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Affiliation(s)
- Pavleta Tzvetkova
- Institute of Organic Chemistry and Institute for Biological Interfaces 4 - Magnetic Resonance, Fritz-Haber-Weg 6, 76131, Karlsruhe, Germany
| | - Burkhard Luy
- Institute of Organic Chemistry and Institute for Biological Interfaces 4 - Magnetic Resonance, Fritz-Haber-Weg 6, 76131, Karlsruhe, Germany
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39
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Narayan R, Kim JE, Kim JY, Lee KE, Kim SO. Graphene Oxide Liquid Crystals: Discovery, Evolution and Applications. ADVANCED MATERIALS (DEERFIELD BEACH, FLA.) 2016; 28:3045-68. [PMID: 26928388 DOI: 10.1002/adma.201505122] [Citation(s) in RCA: 102] [Impact Index Per Article: 12.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/17/2015] [Revised: 12/12/2015] [Indexed: 05/20/2023]
Abstract
The discovery and relevant research progress in graphene oxide liquid crystals (GOLCs), the latest class of 2D nanomaterials exhibiting colloidal liquid crystallinity arising from the intrinsic disc-like shape anisotropy, is highlighted. GOLC has conferred a versatile platform for the development of novel properties and applications based on the facile controllability of molecular scale alignment. The first part of this review offers a brief introduction to LCs, including the theoretical background. Particular attention has been paid to the different types of LC phases that have been reported thus far, such as nematic, lamellar and chiral phases. Several key parameters governing the ultimate stability of GOLC behavior, including pH and ionic strength of aqueous dispersions are highlighted. In a relatively short span of time since its discovery, GOLCs have proved their remarkable potential in a broad spectrum of applications, including highly oriented wet-spun fibers, self-assembled nanocomposites, and architectures for energy storage devices. The second part of this review is devoted to an exclusive overview of the relevant applications. Finally, an outlook is provided into this newly emerging research field, where two well established scientific communities for carbon nanomaterials and liquid crystals are ideally merged.
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Affiliation(s)
- Rekha Narayan
- National Creative Research Initiative Center for Multi-Dimensional Directed Nanoscale Assembly, Department of Materials Science & Engineering, KAIST, Daejeon, 34141, Republic of Korea
| | - Ji Eun Kim
- National Creative Research Initiative Center for Multi-Dimensional Directed Nanoscale Assembly, Department of Materials Science & Engineering, KAIST, Daejeon, 34141, Republic of Korea
| | - Ju Young Kim
- National Creative Research Initiative Center for Multi-Dimensional Directed Nanoscale Assembly, Department of Materials Science & Engineering, KAIST, Daejeon, 34141, Republic of Korea
| | - Kyung Eun Lee
- National Creative Research Initiative Center for Multi-Dimensional Directed Nanoscale Assembly, Department of Materials Science & Engineering, KAIST, Daejeon, 34141, Republic of Korea
| | - Sang Ouk Kim
- National Creative Research Initiative Center for Multi-Dimensional Directed Nanoscale Assembly, Department of Materials Science & Engineering, KAIST, Daejeon, 34141, Republic of Korea
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40
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Zong W, Li GW, Cao JM, Lei X, Hu ML, Sun H, Griesinger C, Tan RX. An Alignment Medium for Measuring Residual Dipolar Couplings in Pure DMSO: Liquid Crystals from Graphene Oxide Grafted with Polymer Brushes. Angew Chem Int Ed Engl 2016. [DOI: 10.1002/ange.201511435] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Wen Zong
- College of Chemistry & Materials Engineering; Wenzhou University; Wenzhou 325035 P.R. China
| | - Gao-Wei Li
- Institute of Functional Biomolecules; State Key Laboratory of Pharmaceutical Biotechnology; Nanjing University; Nanjing 210093 P.R. China
| | - Jiang-Ming Cao
- Institute of Functional Biomolecules; State Key Laboratory of Pharmaceutical Biotechnology; Nanjing University; Nanjing 210093 P.R. China
| | - Xinxiang Lei
- College of Chemistry & Materials Engineering; Wenzhou University; Wenzhou 325035 P.R. China
| | - Mao-Lin Hu
- College of Chemistry & Materials Engineering; Wenzhou University; Wenzhou 325035 P.R. China
| | - Han Sun
- Leibniz-Institut für Molekulare Pharmakologie (FMP); Robert-Roessle-Strasse 10 13125 Berlin Germany
| | - Christian Griesinger
- Department of NMR-based Structural Biology; Max Planck Institute for Biophysical Chemistry; 37077 Göttingen Germany
| | - Ren Xiang Tan
- Institute of Functional Biomolecules; State Key Laboratory of Pharmaceutical Biotechnology; Nanjing University; Nanjing 210093 P.R. China
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41
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Zong W, Li GW, Cao JM, Lei X, Hu ML, Sun H, Griesinger C, Tan RX. An Alignment Medium for Measuring Residual Dipolar Couplings in Pure DMSO: Liquid Crystals from Graphene Oxide Grafted with Polymer Brushes. Angew Chem Int Ed Engl 2016; 55:3690-3. [DOI: 10.1002/anie.201511435] [Citation(s) in RCA: 33] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/09/2015] [Indexed: 11/10/2022]
Affiliation(s)
- Wen Zong
- College of Chemistry & Materials Engineering; Wenzhou University; Wenzhou 325035 P.R. China
| | - Gao-Wei Li
- Institute of Functional Biomolecules; State Key Laboratory of Pharmaceutical Biotechnology; Nanjing University; Nanjing 210093 P.R. China
| | - Jiang-Ming Cao
- Institute of Functional Biomolecules; State Key Laboratory of Pharmaceutical Biotechnology; Nanjing University; Nanjing 210093 P.R. China
| | - Xinxiang Lei
- College of Chemistry & Materials Engineering; Wenzhou University; Wenzhou 325035 P.R. China
| | - Mao-Lin Hu
- College of Chemistry & Materials Engineering; Wenzhou University; Wenzhou 325035 P.R. China
| | - Han Sun
- Leibniz-Institut für Molekulare Pharmakologie (FMP); Robert-Roessle-Strasse 10 13125 Berlin Germany
| | - Christian Griesinger
- Department of NMR-based Structural Biology; Max Planck Institute for Biophysical Chemistry; 37077 Göttingen Germany
| | - Ren Xiang Tan
- Institute of Functional Biomolecules; State Key Laboratory of Pharmaceutical Biotechnology; Nanjing University; Nanjing 210093 P.R. China
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42
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Gil-Silva LF, Santamaría-Fernández R, Navarro-Vázquez A, Gil RR. Collection of NMR Scalar and Residual Dipolar Couplings Using a Single Experiment. Chemistry 2015; 22:472-6. [DOI: 10.1002/chem.201503449] [Citation(s) in RCA: 44] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/29/2015] [Indexed: 11/11/2022]
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43
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Zhu Z, Shi S, Wang H. Radical Chain Polymerization Catalyzed by Graphene Oxide and Cooperative Hydrogen Bonding. Macromol Rapid Commun 2015; 37:187-94. [DOI: 10.1002/marc.201500573] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/22/2015] [Revised: 10/24/2015] [Indexed: 11/12/2022]
Affiliation(s)
- Zhongcheng Zhu
- College of Chemistry Beijing Key Laboratory of Energy Conversion and Storage Materials Beijing Normal University Beijing 100875 P. R. China
| | - Shengjie Shi
- College of Chemistry Beijing Key Laboratory of Energy Conversion and Storage Materials Beijing Normal University Beijing 100875 P. R. China
| | - Huiliang Wang
- College of Chemistry Beijing Key Laboratory of Energy Conversion and Storage Materials Beijing Normal University Beijing 100875 P. R. China
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44
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Becker J, Luy B. CLIP-ASAP-HSQC for fast and accurate extraction of one-bond couplings from isotropic and partially aligned molecules. MAGNETIC RESONANCE IN CHEMISTRY : MRC 2015; 53:878-885. [PMID: 26137959 DOI: 10.1002/mrc.4276] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/03/2015] [Revised: 05/07/2015] [Accepted: 05/12/2015] [Indexed: 06/04/2023]
Abstract
Fast measurement of heteronuclear one-bond couplings, a class of NMR parameters valuable for structure elucidation, is highly desirable, especially if samples undergo chemical reactions or dynamic processes are observed. Methods presented so far face severe limitations in terms of resolution, accessible bandwidth, and sensitivity. We present the CLean InPhase-Acceleration by Sharing Adjacent Polarization-HSQC (CLIP-ASAP-HSQC) pulse sequence that allows fast acquisition of spectra with clean inphase multiplets in about 25 s. The performance in terms of accurate extraction of one-bond couplings is demonstrated on three test samples including partially aligned molecules.
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Affiliation(s)
- Johanna Becker
- Karlsruhe Institute of Technology (KIT), Institute for Biological Interfaces 4 - Magnetic Resonance, Eggenstein-Leopoldshafen, Germany
| | - Burkhard Luy
- Karlsruhe Institute of Technology (KIT), Institute for Biological Interfaces 4 - Magnetic Resonance, Eggenstein-Leopoldshafen, Germany
- Karlsruhe Institute of Technology (KIT), Institute of Organic Chemistry, Karlsruhe, Germany
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45
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Li Z, Liu Z, Sun H, Gao C. Superstructured Assembly of Nanocarbons: Fullerenes, Nanotubes, and Graphene. Chem Rev 2015; 115:7046-117. [PMID: 26168245 DOI: 10.1021/acs.chemrev.5b00102] [Citation(s) in RCA: 232] [Impact Index Per Article: 25.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Affiliation(s)
- Zheng Li
- MOE Key Laboratory of Macromolecular Synthesis and Functionalization, Department of Polymer Science and Engineering, Zhejiang University, Hangzhou 310007, China
| | - Zheng Liu
- MOE Key Laboratory of Macromolecular Synthesis and Functionalization, Department of Polymer Science and Engineering, Zhejiang University, Hangzhou 310007, China
| | - Haiyan Sun
- MOE Key Laboratory of Macromolecular Synthesis and Functionalization, Department of Polymer Science and Engineering, Zhejiang University, Hangzhou 310007, China
| | - Chao Gao
- MOE Key Laboratory of Macromolecular Synthesis and Functionalization, Department of Polymer Science and Engineering, Zhejiang University, Hangzhou 310007, China
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