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Corbet CHWA, van den Bersselaar BWL, de Waal BFM, Reynaerts R, Mali KS, De Feyter S, Jonas AM, Meijer EW, Vantomme G. Self-Assembly of Discrete Oligomers of Naphthalenediimides in Bulk and on Surfaces. Chemistry 2024; 30:e202303107. [PMID: 38009432 DOI: 10.1002/chem.202303107] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/25/2023] [Revised: 11/21/2023] [Accepted: 11/22/2023] [Indexed: 11/28/2023]
Abstract
Here, we report on the synthesis of discrete oligomers of alkyl-bridged naphthalenediimides (NDIs) and study their molecular nanostructures both in bulk, in solution, and at the liquid-solid interface. Via an iterative synthesis method, multiple NDI cores were bridged with short and saturated alkyl-diamines (C3 and C12 ) or long and unsaturated alkyl-diamines (u2 C33 to u8 C100 ) at their imide termini. The strong intermolecular interaction between the NDI cores was observed by probing their photophysical properties in solution. In bulk, the discrete NDI oligomers preferentially ordered in lamellar morphologies, irrespective of whether a saturated or unsaturated spacer was employed. Moreover, both the molecular architecture as well as the crystallization conditions play a significant role in the nanoscale ordering. The long unsaturated alkyl chains lead preferably to folded-chain conformations while their saturated analogues form stretched arrangements. At the solution-solid interface, well-defined lamellar regions were observed. These results show that precision in chemical structure alone is not sufficient to reach well-defined structures of discrete oligomers, but that it must be combined with precision in processing conditions.
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Affiliation(s)
- Christiaan H W A Corbet
- Institute for Complex Molecular Systems and Laboratory of Macromolecular and Organic Chemistry, Department of Chemical Engineering and Chemistry, Eindhoven University of Technology, P.O. Box 513, 5600 MB, Eindhoven, The Netherlands
| | - Bart W L van den Bersselaar
- Institute for Complex Molecular Systems and Laboratory of Macromolecular and Organic Chemistry, Department of Chemical Engineering and Chemistry, Eindhoven University of Technology, P.O. Box 513, 5600 MB, Eindhoven, The Netherlands
| | - Bas F M de Waal
- Institute for Complex Molecular Systems and Laboratory of Macromolecular and Organic Chemistry, Department of Chemical Engineering and Chemistry, Eindhoven University of Technology, P.O. Box 513, 5600 MB, Eindhoven, The Netherlands
| | - Robby Reynaerts
- Division of Molecular Imaging and Photonics, Department of Chemistry, KU Leuven, Celestijnenlaan 200 F, B-3001, Leuven, Belgium
| | - Kunal S Mali
- Division of Molecular Imaging and Photonics, Department of Chemistry, KU Leuven, Celestijnenlaan 200 F, B-3001, Leuven, Belgium
| | - Steven De Feyter
- Division of Molecular Imaging and Photonics, Department of Chemistry, KU Leuven, Celestijnenlaan 200 F, B-3001, Leuven, Belgium
| | - Alain M Jonas
- Institute of Condensed Matter and Nanosciences, Bio- and Soft Matter, Université catholique de Louvain-UCLouvain, Ottignies-Louvain-la-Neuve, Louvain-la-Neuve, B-1348, Belgium
| | - E W Meijer
- Institute for Complex Molecular Systems and Laboratory of Macromolecular and Organic Chemistry, Department of Chemical Engineering and Chemistry, Eindhoven University of Technology, P.O. Box 513, 5600 MB, Eindhoven, The Netherlands
- School of Chemistry and RNA Institute, University of New South Wales, Sydney, Australia
| | - Ghislaine Vantomme
- Institute for Complex Molecular Systems and Laboratory of Macromolecular and Organic Chemistry, Department of Chemical Engineering and Chemistry, Eindhoven University of Technology, P.O. Box 513, 5600 MB, Eindhoven, The Netherlands
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2
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Hu T, Minoia A, Velpula G, Ryskulova K, Van Hecke K, Lazzaroni R, Mali KS, Hoogenboom R, De Feyter S. From One-Dimensional Disordered Racemate to Ordered Racemic Conglomerates through Metal-Coordination-Driven Self-Assembly at the Liquid-Solid Interface. Chemistry 2024; 30:e202302545. [PMID: 37840008 DOI: 10.1002/chem.202302545] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/04/2023] [Revised: 10/09/2023] [Accepted: 10/10/2023] [Indexed: 10/17/2023]
Abstract
In recent years, there has been significant focus on investigating and controlling chiral self-assembly, specifically in the context of enantiomeric separation. This study explores the self-assembly behavior of 4-dodecyl-3,6-di(2-pyridyl)pyridazine (DPP-C12) at the interface between heptanoic acid (HA) and highly oriented pyrolytic graphite (HOPG) using a combination of scanning tunneling microscopy (STM) and multiscale molecular modeling. The self-assembled monolayer structure formed by DPP-C12 is periodic in one direction, but aperiodic in the direction orthogonal to it. These structures resemble 1D disordered racemic compounds. Upon introducing palladium [Pd(II)] ions, complexing with DPP-C12, these 1D disordered racemic compounds spontaneously transform into 2D racemic conglomerates, which is rationalized with the assistance of force-field simulations. Our findings provide insights into the regulation of two-dimensional chirality.
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Affiliation(s)
- Tianze Hu
- KU Leuven, Division of Molecular Imaging and Photonics, Department of Chemistry, Celestijnenlaan 200F, 3001, Leuven, Belgium
| | - Andrea Minoia
- Laboratory for Chemistry of Novel Materials, Materials Research Institute, University of Mons, Place du Parc 20, 7000, Mons, Belgium
| | - Gangamallaiah Velpula
- KU Leuven, Division of Molecular Imaging and Photonics, Department of Chemistry, Celestijnenlaan 200F, 3001, Leuven, Belgium
| | - Kanykei Ryskulova
- Supramolecular Chemistry Group, Centre of Macromolecular Chemistry, Department of Organic and Macromolecular Chemistry, Ghent University, Krijgslaan 281 S4, 9000, Ghent, Belgium
| | - Kristof Van Hecke
- XStruct, Department of Chemistry, Ghent University, Krijgslaan 281 S3, 9000, Ghent, Belgium
| | - Roberto Lazzaroni
- Laboratory for Chemistry of Novel Materials, Materials Research Institute, University of Mons, Place du Parc 20, 7000, Mons, Belgium
| | - Kunal S Mali
- KU Leuven, Division of Molecular Imaging and Photonics, Department of Chemistry, Celestijnenlaan 200F, 3001, Leuven, Belgium
| | - Richard Hoogenboom
- Supramolecular Chemistry Group, Centre of Macromolecular Chemistry, Department of Organic and Macromolecular Chemistry, Ghent University, Krijgslaan 281 S4, 9000, Ghent, Belgium
| | - Steven De Feyter
- KU Leuven, Division of Molecular Imaging and Photonics, Department of Chemistry, Celestijnenlaan 200F, 3001, Leuven, Belgium
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3
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Hu H, Zhang YY, Ma H, Yang Y, Mei S, Li J, Xu JF, Zhang X. A Supramolecular Naphthalene Diimide Radical Anion with Efficient NIR-II Photothermal Conversion for E. coli-Responsive Photothermal Therapy. Angew Chem Int Ed Engl 2023; 62:e202308513. [PMID: 37607898 DOI: 10.1002/anie.202308513] [Citation(s) in RCA: 7] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/15/2023] [Revised: 07/21/2023] [Accepted: 08/21/2023] [Indexed: 08/24/2023]
Abstract
We report a supramolecular naphthalene diimide (NDI) radical anion with efficient NIR-II photothermal conversion for E. coli-responsive photothermal therapy. The supramolecular radical anion (NDI-2CB[7])⋅- , which is obtained from the E. coli-induced in situ reduction of NDI-2CB[7] neutral complex, formed by the host-guest interaction between an NDI derivative and cucurbit[7]uril (CB[7]), exhibits unexpectedly strong NIR-II absorption and remarkable photothermal conversion capacity in aqueous solution. The NIR-II absorption is caused by the self-assembly of NDI radical anions to form supramolecular dimer radicals in aqueous solution, which is supported by theoretically predicted spectra. The (NDI-2CB[7])⋅- demonstrates excellent NIR-II photothermal antimicrobial activity (>99 %). This work provides a new approach for constructing NIR-II photothermal agents and non-contact treatments for bacterial infections.
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Affiliation(s)
- Hao Hu
- Key Lab of Organic Optoelectronics & Molecular Engineering of Ministry of Education, Engineering Research Center of Advanced Rare-Earth Materials of Ministry of Education, Department of Chemistry, Tsinghua University, Beijing, 100084, China
| | - Yang-Yang Zhang
- Key Lab of Organic Optoelectronics & Molecular Engineering of Ministry of Education, Engineering Research Center of Advanced Rare-Earth Materials of Ministry of Education, Department of Chemistry, Tsinghua University, Beijing, 100084, China
- Department of Chemistry, Southern University of Science and Technology, Shenzhen, 518005, China
| | - He Ma
- Key Lab of Organic Optoelectronics & Molecular Engineering of Ministry of Education, Engineering Research Center of Advanced Rare-Earth Materials of Ministry of Education, Department of Chemistry, Tsinghua University, Beijing, 100084, China
| | - Yuchong Yang
- Key Lab of Organic Optoelectronics & Molecular Engineering of Ministry of Education, Engineering Research Center of Advanced Rare-Earth Materials of Ministry of Education, Department of Chemistry, Tsinghua University, Beijing, 100084, China
| | - Shan Mei
- Key Lab of Organic Optoelectronics & Molecular Engineering of Ministry of Education, Engineering Research Center of Advanced Rare-Earth Materials of Ministry of Education, Department of Chemistry, Tsinghua University, Beijing, 100084, China
| | - Jun Li
- Key Lab of Organic Optoelectronics & Molecular Engineering of Ministry of Education, Engineering Research Center of Advanced Rare-Earth Materials of Ministry of Education, Department of Chemistry, Tsinghua University, Beijing, 100084, China
- Department of Chemistry, Southern University of Science and Technology, Shenzhen, 518005, China
| | - Jiang-Fei Xu
- Key Lab of Organic Optoelectronics & Molecular Engineering of Ministry of Education, Engineering Research Center of Advanced Rare-Earth Materials of Ministry of Education, Department of Chemistry, Tsinghua University, Beijing, 100084, China
| | - Xi Zhang
- Key Lab of Organic Optoelectronics & Molecular Engineering of Ministry of Education, Engineering Research Center of Advanced Rare-Earth Materials of Ministry of Education, Department of Chemistry, Tsinghua University, Beijing, 100084, China
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Liu S, Norikane Y, Kikkawa Y. Two-dimensional molecular networks at the solid/liquid interface and the role of alkyl chains in their building blocks. BEILSTEIN JOURNAL OF NANOTECHNOLOGY 2023; 14:872-892. [PMID: 37674543 PMCID: PMC10477993 DOI: 10.3762/bjnano.14.72] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/24/2023] [Accepted: 07/25/2023] [Indexed: 09/08/2023]
Abstract
Nanoarchitectonics has attracted increasing attention owing to its potential applications in nanomachines, nanoelectronics, catalysis, and nanopatterning, which can contribute to overcoming global problems related to energy and environment, among others. However, the fabrication of ordered nanoarchitectures remains a challenge, even in two dimensions. Therefore, a deeper understanding of the self-assembly processes and substantial factors for building ordered structures is critical for tailoring flexible and desirable nanoarchitectures. Scanning tunneling microscopy is a powerful tool for revealing the molecular conformations, arrangements, and orientations of two-dimensional (2D) networks on surfaces. The fabrication of 2D assemblies involves non-covalent interactions that play a significant role in the molecular arrangement and orientation. Among the non-covalent interactions, dispersion interactions that derive from alkyl chain units are believed to be weak. However, alkyl chains play an important role in the adsorption onto substrates, as well as in the in-plane intermolecular interactions. In this review, we focus on the role of alkyl chains in the formation of ordered 2D assemblies at the solid/liquid interface. The alkyl chain effects on the 2D assemblies are introduced together with examples documented in the past decades.
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Affiliation(s)
- Suyi Liu
- Graduate School of Science and Technology, University of Tsukuba, Ibaraki, 305-8571, Japan
- National Institute of Advanced Industrial Science and Technology (AIST), Tsukuba Central 5, 1-1-1 Higashi, Tsukuba, Ibaraki 305-8565, Japan
| | - Yasuo Norikane
- National Institute of Advanced Industrial Science and Technology (AIST), Tsukuba Central 5, 1-1-1 Higashi, Tsukuba, Ibaraki 305-8565, Japan
- Faculty of Pure and Applied Sciences, University of Tsukuba, Ibaraki, 305-8571, Japan
| | - Yoshihiro Kikkawa
- National Institute of Advanced Industrial Science and Technology (AIST), Tsukuba Central 5, 1-1-1 Higashi, Tsukuba, Ibaraki 305-8565, Japan
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Jang D, Heo J, Jannah F, Khazi MI, Son YJ, Noh J, An H, Park SM, Yoon DK, Kadamannil NN, Jelinek R, Kim J. Stimulus‐Responsive Tubular Conjugated Polymer 2D Nanosheets. Angew Chem Int Ed Engl 2022; 61:e202211465. [DOI: 10.1002/anie.202211465] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/04/2022] [Indexed: 11/11/2022]
Affiliation(s)
- Daewoong Jang
- Department of Chemical Engineering Hanyang University Seoul 04763 Korea
| | - Jung‐Moo Heo
- Department of Chemical Engineering Hanyang University Seoul 04763 Korea
| | - Fadilatul Jannah
- Department of Chemical Engineering Hanyang University Seoul 04763 Korea
| | | | - Young Ji Son
- Department of Chemistry Hanyang University Seoul 04763 Korea
| | - Jaegeun Noh
- Institute of Nano Science and Technology Hanyang University Seoul 04763 Korea
- Department of Chemistry Hanyang University Seoul 04763 Korea
| | - Hyosung An
- Department of Petrochemical Materials Engineering Chonnam National University Yeosu 59631 Korea
| | - Soon Mo Park
- Graduate School of Nanoscience and Technology Korea Advanced Institute of Science and Technology (KAIST) Daejeon 34141 Korea
| | - Dong Ki Yoon
- Graduate School of Nanoscience and Technology Korea Advanced Institute of Science and Technology (KAIST) Daejeon 34141 Korea
- Department of Chemistry Korea Advanced Institute of Science and Technology (KAIST) Daejeon 34141 Korea
| | | | - Raz Jelinek
- Department of Chemistry Ben Gurion University Negev Beer Sheva 8410501 Israel
| | - Jong‐Man Kim
- Department of Chemical Engineering Hanyang University Seoul 04763 Korea
- Institute of Nano Science and Technology Hanyang University Seoul 04763 Korea
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6
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Jang D, Heo JM, Jannah F, Khazi MI, Son YJ, Noh J, An H, Park SM, Yoon DK, Kadamannil NN, Jelinek R, Kim JM. Stimulus‐responsive Tubular Conjugated Polymer 2D Nanosheets. Angew Chem Int Ed Engl 2022. [DOI: 10.1002/ange.202211465] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Daewoong Jang
- Hanyang University Department of Chemical Engineering KOREA, REPUBLIC OF
| | - Jung-Moo Heo
- Hanyang University Department of Chemical Engineering KOREA, REPUBLIC OF
| | - Fadilatul Jannah
- Hanyang University Department of Chemical Engineering KOREA, REPUBLIC OF
| | | | - Young Ji Son
- Hanyang University Department of Chemistry KOREA, REPUBLIC OF
| | - Jaegeun Noh
- Hanyang University Department of Chemistry KOREA, REPUBLIC OF
| | - Hyosung An
- Chonnam National University Department of Petrochemical Materials Engineering KOREA, REPUBLIC OF
| | - Soon Mo Park
- Korea Advanced Institute of Science and Technology Graduate School of Nanoscience and Technologies KOREA, REPUBLIC OF
| | - Dong Ki Yoon
- Korea Advanced Institute of Science and Technology Department of Chemistry KOREA, REPUBLIC OF
| | | | - Raz Jelinek
- Ben-Gurion University of the Negev Department of Chemistry ISRAEL
| | - Jong-Man Kim
- Hanyang University Department of Chemical Engineering 222 Wangsimni-roSeongdong-gu 04763 Seoul KOREA, REPUBLIC OF
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7
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Alić J, Biljan I, Štefanić Z, Šekutor M. Preparation and characterization of non-aromatic ether self-assemblies on a HOPG surface. NANOTECHNOLOGY 2022; 33:355603. [PMID: 35545006 DOI: 10.1088/1361-6528/ac6e72] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/29/2022] [Accepted: 05/11/2022] [Indexed: 06/15/2023]
Abstract
On-surface self-assemblies of aromatic organic molecules have been widely investigated, but the characterization of analogous self-assemblies consisting of fully sp3-hybridized molecules remains challenging. The possible on-surface orientations of alkyl molecules not exclusively comprised of long alkyl chains are difficult to distinguish because of their inherently low symmetry and non-planar nature. Here, we present a detailed study of diamondoid ethers, structurally rigid and fully saturated molecules, which form uniform 2D monolayers on a highly oriented pyrolytic graphite (HOPG) surface. Using scanning tunneling microscopy, various computational tools, and x-ray structural analysis, we identified the most favorable on-surface orientations of these rigid ethers and accounted for the forces driving the self-organization process. The influence of the oxygen atom and London dispersion interactions were found to be responsible for the formation of the observed highly ordered 2D ether assemblies. Our findings provide insight into the on-surface properties and behavior of non-aromatic organic compounds and broaden our understanding of the phenomena characteristic of monolayers consisting of non-planar molecules.
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Affiliation(s)
- Jasna Alić
- Department of Organic Chemistry and Biochemistry, Ruđer Bošković Institute, Bijenička 54, 10 000 Zagreb, Croatia
| | - Ivana Biljan
- Department of Chemistry, Faculty of Science, University of Zagreb, Horvatovac 102a, 10 000 Zagreb, Croatia
| | - Zoran Štefanić
- Department of Physical Chemistry, Ruđer Bošković Institute, Bijenička 54, 10 000 Zagreb, Croatia
| | - Marina Šekutor
- Department of Organic Chemistry and Biochemistry, Ruđer Bošković Institute, Bijenička 54, 10 000 Zagreb, Croatia
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8
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Fabrication of Ultrafine, Highly Ordered Nanostructures Using Carbohydrate-Inorganic Hybrid Block Copolymers. NANOMATERIALS 2022; 12:nano12101653. [PMID: 35630875 PMCID: PMC9144075 DOI: 10.3390/nano12101653] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/21/2022] [Revised: 05/10/2022] [Accepted: 05/10/2022] [Indexed: 12/04/2022]
Abstract
Block copolymers (BCPs) have garnered considerable interest due to their ability to form microphase-separated structures suitable for nanofabrication. For these applications, it is critical to achieve both sufficient etch selectivity and a small domain size. To meet both requirements concurrently, we propose the use of oligosaccharide and oligodimethylsiloxane as hydrophilic and etch-resistant hydrophobic inorganic blocks, respectively, to build up a novel BCP system, i.e., carbohydrate-inorganic hybrid BCP. The carbohydrate-inorganic hybrid BCPs were synthesized via a click reaction between oligodimethylsiloxane with an azido group at each chain end and propargyl-functionalized maltooligosaccharide (consisting of one, two, and three glucose units). In the bulk state, small-angle X-ray scattering revealed that these BCPs microphase separated into gyroid, asymmetric lamellar, and symmetric lamellar structures with domain-spacing ranging from 5.0 to 5.9 nm depending on the volume fraction. Additionally, we investigated microphase-separated structures in the thin film state and discovered that the BCP with the most asymmetric composition formed an ultrafine and highly oriented gyroid structure as well as in the bulk state. After reactive ion etching, the gyroid thin film was transformed into a nanoporous-structured gyroid SiO2 material, demonstrating the material’s promising potential as nanotemplates.
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9
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Sun J, Vogel J, Chen L, Schleper AL, Bergner T, Kuehne AJC, von Delius M. Carbodiimide-Driven Dimerization and Self-Assembly of Artificial, Ribose-Based Amphiphiles. Chemistry 2022; 28:e202104116. [PMID: 35038189 PMCID: PMC9303926 DOI: 10.1002/chem.202104116] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/16/2021] [Indexed: 12/20/2022]
Abstract
The aqueous self‐assembly of amphiphiles into aggregates such as micelles and vesicles has been widely investigated over the past decades with applications ranging from materials science to drug delivery. The combination of characteristic properties of nucleic acids and amphiphiles is of substantial interest to mimic biological self‐organization and compartmentalization. Herein, we present ribose‐ and ribonucleotide‐based amphiphiles and investigate their self‐assembly as well as their fundamental reactivity. We found that various types of aggregates are formed, ranging in size from nanometers to micrometers and all amphiphiles exhibit aggregation‐induced emission (AIE) in solution as well as in the solid state. We also observed that the addition of 1‐ethyl‐3‐(3‐dimethylaminopropyl)carbodiimide (EDC) leads to rapid and selective dimerization of the amphiphiles into pyrophosphates, which decreases the critical aggregation concentration (CAC) by a factor of 25 when compared to the monomers. Since the propensity for amphiphile dimerization is correlated with their tendency to self‐assemble, our results may be relevant for the formation of rudimentary compartments under prebiotic conditions.
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Affiliation(s)
- Jing Sun
- Institute of Organic Chemistry, Ulm University, Albert-Einstein-Allee 11, 89081, Ulm, Germany
| | - Julian Vogel
- Institute of Organic Chemistry, Ulm University, Albert-Einstein-Allee 11, 89081, Ulm, Germany
| | - Lisa Chen
- Institute of Macromolecular and Organic Chemistry, Ulm University, Albert-Einstein-Allee 11, 89081, Ulm, Germany
| | - A Lennart Schleper
- Institute of Macromolecular and Organic Chemistry, Ulm University, Albert-Einstein-Allee 11, 89081, Ulm, Germany
| | - Tim Bergner
- Central Facility for Electron Microscopy, Ulm University, Albert-Einstein-Allee 11, 89081, Ulm, Germany
| | - Alexander J C Kuehne
- Institute of Macromolecular and Organic Chemistry, Ulm University, Albert-Einstein-Allee 11, 89081, Ulm, Germany.,DWI - Leibniz-Institute for Interactive Materials, Forckenbeckstraße 50, 52074, Aachen, Germany
| | - Max von Delius
- Institute of Organic Chemistry, Ulm University, Albert-Einstein-Allee 11, 89081, Ulm, Germany
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Zhou J, Penna M, Lin Z, Han Y, Lafleur RPM, Qu Y, Richardson JJ, Yarovsky I, Jokerst JV, Caruso F. Robust and Versatile Coatings Engineered via Simultaneous Covalent and Noncovalent Interactions. Angew Chem Int Ed Engl 2021. [DOI: 10.1002/ange.202106316] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]
Affiliation(s)
- Jiajing Zhou
- ARC Centre of Excellence in Convergent Bio-Nano Science and Technology, and the Department of Chemical Engineering The University of Melbourne Parkville Victoria 3010 Australia
- Department of NanoEngineering University of California San Diego 9500 Gilman Dr. La Jolla CA 92093 USA
| | - Matthew Penna
- School of Engineering RMIT University Melbourne Victoria 3001 Australia
| | - Zhixing Lin
- ARC Centre of Excellence in Convergent Bio-Nano Science and Technology, and the Department of Chemical Engineering The University of Melbourne Parkville Victoria 3010 Australia
| | - Yiyuan Han
- ARC Centre of Excellence in Convergent Bio-Nano Science and Technology, and the Department of Chemical Engineering The University of Melbourne Parkville Victoria 3010 Australia
| | - René P. M. Lafleur
- ARC Centre of Excellence in Convergent Bio-Nano Science and Technology, and the Department of Chemical Engineering The University of Melbourne Parkville Victoria 3010 Australia
| | - Yijiao Qu
- ARC Centre of Excellence in Convergent Bio-Nano Science and Technology, and the Department of Chemical Engineering The University of Melbourne Parkville Victoria 3010 Australia
| | - Joseph J. Richardson
- ARC Centre of Excellence in Convergent Bio-Nano Science and Technology, and the Department of Chemical Engineering The University of Melbourne Parkville Victoria 3010 Australia
| | - Irene Yarovsky
- School of Engineering RMIT University Melbourne Victoria 3001 Australia
| | - Jesse V. Jokerst
- Department of NanoEngineering University of California San Diego 9500 Gilman Dr. La Jolla CA 92093 USA
- Materials Science and Engineering Program University of California San Diego 9500 Gilman Dr. La Jolla CA 92093 USA
- Department of Radiology University of California San Diego 9500 Gilman Dr. La Jolla CA 92093 USA
| | - Frank Caruso
- ARC Centre of Excellence in Convergent Bio-Nano Science and Technology, and the Department of Chemical Engineering The University of Melbourne Parkville Victoria 3010 Australia
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11
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Zhou J, Penna M, Lin Z, Han Y, Lafleur RPM, Qu Y, Richardson JJ, Yarovsky I, Jokerst JV, Caruso F. Robust and Versatile Coatings Engineered via Simultaneous Covalent and Noncovalent Interactions. Angew Chem Int Ed Engl 2021; 60:20225-20230. [PMID: 34258845 PMCID: PMC8405577 DOI: 10.1002/anie.202106316] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/10/2021] [Revised: 06/16/2021] [Indexed: 12/17/2022]
Abstract
Interfacial modular assembly has emerged as an adaptable strategy for engineering the surface properties of substrates in biomedicine, photonics, and catalysis. Herein, we report a versatile and robust coating (pBDT-TA), self-assembled from tannic acid (TA) and a self-polymerizing aromatic dithiol (i.e., benzene-1,4-dithiol, BDT), that can be engineered on diverse substrates with a precisely tuned thickness (5-40 nm) by varying the concentration of BDT used. The pBDT-TA coating is stabilized by covalent (disulfide) bonds and supramolecular (π-π) interactions, endowing the coating with high stability in various harsh aqueous environments across ionic strength, pH, temperature (e.g., 100 mM NaCl, HCl (pH 1) or NaOH (pH 13), and water at 100 °C), as well as surfactant solution (e.g., 100 mM Triton X-100) and biological buffer (e.g., Dulbecco's phosphate-buffered saline), as validated by experiments and simulations. Moreover, the reported pBDT-TA coating enables secondary reactions on the coating for engineering hybrid adlayers (e.g., ZIF-8 shells) via phenolic-mediated adhesion, and the facile integration of aromatic fluorescent dyes (e.g., rhodamine B) via π interactions without requiring elaborate synthetic processes.
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Affiliation(s)
- Jiajing Zhou
- ARC Centre of Excellence in Convergent Bio-Nano Science and Technology, and the, Department of Chemical Engineering, The University of Melbourne, Parkville, Victoria, 3010, Australia
- Department of NanoEngineering, University of California San Diego, 9500 Gilman Dr., La Jolla, CA, 92093, USA
| | - Matthew Penna
- School of Engineering, RMIT University, Melbourne, Victoria, 3001, Australia
| | - Zhixing Lin
- ARC Centre of Excellence in Convergent Bio-Nano Science and Technology, and the, Department of Chemical Engineering, The University of Melbourne, Parkville, Victoria, 3010, Australia
| | - Yiyuan Han
- ARC Centre of Excellence in Convergent Bio-Nano Science and Technology, and the, Department of Chemical Engineering, The University of Melbourne, Parkville, Victoria, 3010, Australia
| | - René P M Lafleur
- ARC Centre of Excellence in Convergent Bio-Nano Science and Technology, and the, Department of Chemical Engineering, The University of Melbourne, Parkville, Victoria, 3010, Australia
| | - Yijiao Qu
- ARC Centre of Excellence in Convergent Bio-Nano Science and Technology, and the, Department of Chemical Engineering, The University of Melbourne, Parkville, Victoria, 3010, Australia
| | - Joseph J Richardson
- ARC Centre of Excellence in Convergent Bio-Nano Science and Technology, and the, Department of Chemical Engineering, The University of Melbourne, Parkville, Victoria, 3010, Australia
| | - Irene Yarovsky
- School of Engineering, RMIT University, Melbourne, Victoria, 3001, Australia
| | - Jesse V Jokerst
- Department of NanoEngineering, University of California San Diego, 9500 Gilman Dr., La Jolla, CA, 92093, USA
- Materials Science and Engineering Program, University of California San Diego, 9500 Gilman Dr., La Jolla, CA, 92093, USA
- Department of Radiology, University of California San Diego, 9500 Gilman Dr., La Jolla, CA, 92093, USA
| | - Frank Caruso
- ARC Centre of Excellence in Convergent Bio-Nano Science and Technology, and the, Department of Chemical Engineering, The University of Melbourne, Parkville, Victoria, 3010, Australia
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Barinov NA, Tolstova AP, Bersenev EA, Ivanov DA, Dubrovin EV, Klinov DV. Molecular patterns of oligopeptide hydrocarbons on graphite. Colloids Surf B Biointerfaces 2021; 206:111921. [PMID: 34157520 DOI: 10.1016/j.colsurfb.2021.111921] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/08/2020] [Revised: 05/19/2021] [Accepted: 06/13/2021] [Indexed: 10/21/2022]
Abstract
Graphitic materials including graphene, carbon nanotubes and fullerenes, are promising for use in nanotechnology and biomedicine. Non-covalent functionalization by peptides and other organic molecules allows changing the properties of graphitic surfaces in a controlled manner and represents a big potential for fundamental research and applications. Recently described oligopeptide-hydrocarbon derivative N,N'-(decane-1,10-diyl)bis(tetraglycineamide) (GM) is highly prospective for the development of graphitic interfaces in biosensor application as well as in structural biology for improving the quality of high-resolution atomic force microscopy (AFM) visualization of individual biomacromolecules. However, molecular organization of GM on graphitic surfaces is still unknown. In this work, the molecular model of GM at the water/highly oriented pyrolytic graphite (HOPG) interface has been developed basing on the high-resolution AFM and full-atom molecular modeling data. This model explains two periodicities observed in AFM images by GM self-assembly on a HOPG surface with formation of the stacks with the lateral shifts. The obtained results reveal the particular patterns and dynamics of GM molecules adsorbed on graphite and unravel the puzzle of peptide self-assembly on graphitic surfaces.
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Affiliation(s)
- Nikolay A Barinov
- Federal Research and Clinical Center of Physical-Chemical Medicine of Federal Medical Biological Agency, Malaya Pirogovskaya 1a, Moscow 119435 Russian Federation; Sirius University of Science and Technology, 1 Olympic Ave, 354340, Sochi, Russian Federation
| | - Anna P Tolstova
- Engelhardt Institute of Molecular Biology, Vavilova 32, 119991, Moscow, Russian Federation
| | - Egor A Bersenev
- Moscow Institute of Physics and Technology, Institutskiy Per. 9, Dolgoprudny 141700, Russian Federation; Institute of Problems of Chemical Physics, Russian Academy of Sciences, Chernogolovka 142432, Russian Federation
| | - Dmitry A Ivanov
- Sirius University of Science and Technology, 1 Olympic Ave, 354340, Sochi, Russian Federation; Institut de Sciences des Matériaux de Mulhouse-IS2M, CNRS UMR 7361, 15, rue Jean Starcky, F-68057 Mulhouse, France
| | - Evgeniy V Dubrovin
- Federal Research and Clinical Center of Physical-Chemical Medicine of Federal Medical Biological Agency, Malaya Pirogovskaya 1a, Moscow 119435 Russian Federation; Lomonosov Moscow State University, Leninskie Gory 1 Bld. 2, 119991 Moscow, Russian Federation.
| | - Dmitry V Klinov
- Federal Research and Clinical Center of Physical-Chemical Medicine of Federal Medical Biological Agency, Malaya Pirogovskaya 1a, Moscow 119435 Russian Federation; Sirius University of Science and Technology, 1 Olympic Ave, 354340, Sochi, Russian Federation.
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Heideman GH, Berrocal JA, Stöhr M, Meijer EW, Feringa BL. Stepwise Adsorption of Alkoxy-Pyrene Derivatives onto a Lamellar, Non-Porous Naphthalenediimide-Template on HOPG. Chemistry 2021; 27:207-211. [PMID: 32893412 PMCID: PMC7821129 DOI: 10.1002/chem.202004008] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/02/2020] [Indexed: 01/07/2023]
Abstract
The development of new strategies for the preparation of multicomponent supramolecular assemblies is a major challenge on the road to complex functional molecular systems. Here we present the use of a non-porous self-assembled monolayer from uC33 -NDI-uC33 , a naphthalenediimide symmetrically functionalized with unsaturated 33 carbon-atom-chains, to prepare bicomponent supramolecular surface systems with a series of alkoxy-pyrene (PyrOR) derivatives at the liquid/HOPG interface. While previous attempts at directly depositing many of these PyrOR units at the liquid/HOPG interface failed, the multicomponent approach through the uC33 -NDI-uC33 template enabled control over molecular interactions and facilitated adsorption. The PyrOR deposition restructured the initial uC33 -NDI-uC33 monolayer, causing an expansion in two dimensions to accommodate the guests. As far as we know, this represents the first example of a non-porous or non-metal complex-bearing monolayer that allows the stepwise formation of multicomponent supramolecular architectures on surfaces.
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Affiliation(s)
- G Henrieke Heideman
- Stratingh Institute for Chemistry, University of Groningen, Nijenborgh 4, 9747, AG, Groningen, The Netherlands
| | - José Augusto Berrocal
- Stratingh Institute for Chemistry, University of Groningen, Nijenborgh 4, 9747, AG, Groningen, The Netherlands.,Institute for Complex Molecular Systems and, Laboratory of Macromolecular and Organic Chemistry, Eindhoven University of Technology, 5600 MB, Eindhoven, The Netherlands
| | - Meike Stöhr
- Zernike Institute for Advanced Materials, University of Groningen, 9747 AG Groningen, The Netherlands
| | - E W Meijer
- Institute for Complex Molecular Systems and, Laboratory of Macromolecular and Organic Chemistry, Eindhoven University of Technology, 5600 MB, Eindhoven, The Netherlands
| | - Ben L Feringa
- Stratingh Institute for Chemistry, University of Groningen, Nijenborgh 4, 9747, AG, Groningen, The Netherlands
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Berrocal J, Heideman GH, de Waal BFM, Meijer EW, Feringa BL. Combinatorial Selection Among Geometrical Isomers of Discrete Long-Carbon-Chain Naphthalenediimides Induces Local Order at the Liquid/Solid Interface. ACS NANO 2020; 14:13865-13875. [PMID: 32914965 PMCID: PMC7596778 DOI: 10.1021/acsnano.0c06274] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/27/2020] [Accepted: 09/11/2020] [Indexed: 06/11/2023]
Abstract
We report two families of naphthalenediimides (NDIs) symmetrically functionalized with discrete carbon chains comprising up to 55 carbon atoms (Cn-NDI-Cn, n = 39, 44, 50, and 55) and their self-assembly at the 1-phenyloctane/highly oriented pyrolytic graphite interface (1-PO/HOPG interface). The compounds differ by the presence or absence of two or three internal double bonds in the carbon chains (unsaturated and saturated Cn-NDI-Cn, respectively). Combinatorial distributions of geometrical isomers displaying either the E- or Z-configuration at each double bond are obtained for the unsaturated compounds. Analysis of the self-assembled monolayers of equally long unsaturated and saturated Cn-NDI-Cn by scanning tunneling microscopy (STM) reveal that all Cn-NDI-Cn tend to form lamellar systems featuring alternating areas of aromatic cores and carbon chains. Extended chain lengths are found to significantly increase disorder in the self-assembled monolayers due to misalignments and enhanced strength of interchain interactions. This phenomenon is antagonized by the local order-inducing effect of the internal double bonds: unsaturated Cn-NDI-Cn give qualitatively more ordered self-assembled monolayers compared to their saturated counterparts. The use of combinatorial distributions of unsaturated Cn-NDI-Cn geometrical isomers does not represent a limitation to achieve local order in the self-assembled monolayers. The self-assembly process operates a combinatorial search and selects the geometrical isomer(s) affording the most thermodynamically stable pattern, highlighting the adaptive character of the system. Finally, the antagonistic interplay between the extended carbon chain lengths and the presence of internal double bonds brings to the discovery of the lamellar "phase C" morphology for unsaturated Cn-NDI-Cn with n ≥ 50.
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Affiliation(s)
- José
Augusto Berrocal
- Stratingh
Institute for Chemistry, University of Groningen, Nijenborgh 4, Groningen 9747 AG, The
Netherlands
- Institute
for Complex Molecular Systems and Laboratory of Macromolecular and
Organic Chemistry, Eindhoven University
of Technology, Eindhoven 5600 MB, The Netherlands
| | - G. Henrieke Heideman
- Stratingh
Institute for Chemistry, University of Groningen, Nijenborgh 4, Groningen 9747 AG, The
Netherlands
| | - Bas F. M. de Waal
- Institute
for Complex Molecular Systems and Laboratory of Macromolecular and
Organic Chemistry, Eindhoven University
of Technology, Eindhoven 5600 MB, The Netherlands
| | - E. W. Meijer
- Institute
for Complex Molecular Systems and Laboratory of Macromolecular and
Organic Chemistry, Eindhoven University
of Technology, Eindhoven 5600 MB, The Netherlands
| | - Ben L. Feringa
- Stratingh
Institute for Chemistry, University of Groningen, Nijenborgh 4, Groningen 9747 AG, The
Netherlands
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