Transformation Network Culminating in a Heteroleptic Cd6L6L'2 Twisted Trigonal Prism

Ligand Conformation Controls Assembly of a Helicate/Mesocate, Heteroleptic [Pd2L2L'2] Cages and a Six-Jagged [Pd6L12] Ring

Molecular building blocks, capable of adopting several strongly deviating conformations, are of particular interest in the development of stimuli-responsive self-assemblies. The pronounced structural flexibility of a short acridone-based bridging ligand, equipped with two monodentate isoquinoline donors, is herein exploited to assemble a surprisingly diverse series of coordination-driven Pd(II) architectures. First, it can form a highly twisted Pd2L4 helicate, transformable into the corresponding mesocate, controlled by temperature, counter anion and choice of solvent. Second, it also allows the formation of heteroleptic cages, either from a mix of ligands with Pd(II) cations or by cage-to-cage transformation from homoleptic assemblies. Here, the acridone-based ligand tolerates counter ligands that carry their donors either in a diverging or converging arrangement, as it can rotate its own coordination sites by 90° and structurally adapt to both situations via shape complementarity. Third, by a near 180° rotation of only one of its arms, the ligand can adopt an S-shape conformation and form an unprecedented C6h-symmetric Pd6L12 saw-toothed six-membered ring.

Diastereoselective Self-Assembly of Low-Symmetry Pdn L2n Nanocages through Coordination-Sphere Engineering

Metal-organic cages (MOCs) are popular host architectures assembled from ligands and metal ions/nodes. Assembling structurally complex, low-symmetry MOCs with anisotropic cavities can be limited by the formation of statistical isomer libraries. We set out to investigate the use of primary coordination-sphere engineering (CSE) to bias isomer selectivity within homo- and heteroleptic Pdn L2n cages. Unexpected differences in selectivities between alternative donor groups led us to recognise the significant impact of the second coordination sphere on isomer stabilities. From this, molecular-level insight into the origins of selectivity between cis and trans diastereoisomers was gained, highlighting the importance of both host-guest and host-solvent interactions, in addition to ligand design. This detailed understanding allows precision engineering of low-symmetry MOC assemblies without wholesale redesign of the ligand framework, and fundamentally provides a theoretical scaffold for the development of stimuli-responsive, shape-shifting MOCs.

Dual reactivity based dynamic covalent chemistry: mechanisms and applications

Dynamic covalent chemistry (DCC) focuses on the reversible formation, breakage, and exchange of covalent bonds and assemblies, setting a bridge between irreversible organic synthesis and supramolecular chemistry and finding wide utility. In order to enhance structural and functional diversity and complexity, different types of dynamic covalent reactions (DCRs) are placed in one vessel, encompassing orthogonal DCC without crosstalk and communicating DCC with a shared reactive functional group. As a means of adding tautomers, widespread in chemistry, to interconnected DCRs and combining the features of orthogonal and communicating DCRs, a concept of dual reactivity based DCC and underlying structural and mechanistic insights are summarized. The manipulation of the distinct reactivity of structurally diverse ring-chain tautomers allows selective activation and switching of reaction pathways and corresponding DCRs (C-N, C-O, and C-S) and assemblies. The coupling with photoswitches further enables light-mediated formation and scission of multiple types of reversible covalent bonds. To showcase the capability of dual reactivity based DCC, the versatile applications in dynamic polymers and luminescent materials are presented, paving the way for future functionalization studies.

A Diverse Array of Large Capsules Transform in Response to Stimuli

The allosteric regulation of biomolecules, such as enzymes, enables them to adapt and alter their conformation to fit specific substrates, expressing different functionalities in response to stimuli. Different stimuli can also trigger synthetic coordination cages to change their shape, size, and nuclearity by reconfiguring the dynamic metal-ligand bonds that hold them together. Here we demonstrate an abiological system consisting of different organic subcomponents and Zn^II metal ions, which can respond to simple stimuli in complex ways. A Zn^II₂₀L₁₂ dodecahedron transforms to give a larger Zn^II₃₀L₁₂ icosidodecahedron through subcomponent exchange, as an aldehyde that forms bidentate ligands is displaced in favor of one that forms tridentate ligands together with a penta-amine subcomponent. In the presence of a chiral template guest, the same system that produced the icosidodecahedron instead gives a Zn^II₁₅L₆ truncated rhombohedral architecture through enantioselective self-assembly. Under specific crystallization conditions, a guest induces a further reconfiguration of either the Zn^II₃₀L₁₂ or Zn^II₁₅L₆ cages to yield an unprecedented Zn^II₂₀L₈ pseudo-truncated octahedral structure. The transformation network of these cages shows how large synthetic hosts can undergo structural adaptation through the application of chemical stimuli, opening pathways to broader applications.

Probing the Importance of Host Symmetry on Carbohydrate Recognition

The design of molecular cages with low symmetry could allow for more specific tuning of their properties and better mimic the unsymmetrical and complex environment of protein pockets. However, the added value of lowering symmetry of molecular receptors has been rarely demonstrated. Herein, C₃ - and C₁ -symmetrical cages, presenting the same recognition sites, have been synthesized and investigated as hosts for carbohydrate recognition. Structurally related derivatives of glucose, galactose and mannose were found to have greater affinity to the receptor with the lowest symmetry than to their C₃ -symmetrical analogue. According to the host cavity modelling, the C₁ symmetry receptor exhibits a wider opening than its C₃ -symmetrical counterpart, providing easier access and thus promoting guest proximity to binding sites. Moreover, our results show the high stereo- and substrate selectivity of the C₁ symmetry cage with respect to its C₃ counterpart in the recognition of sugars.

Light-Powered Reversible Guest Release and Uptake from Zn4L4 Capsules

A strategy for light-powered guest release from a tetrahedral capsule has been developed by incorporating azobenzene units at its vertices. A new Zn4L4 tetrahedral capsule bearing 12 diazo moieties at its metal-ion vertices was prepared from a phenyldiazenyl-functionalized subcomponent and a central trialdehyde panel. Ultraviolet irradiation caused isomerization of the peripheral diazo groups from the thermodynamically preferred trans configuration to the cis form, thereby generating steric clash and resulting in cage disassembly and concomitant guest release. Visible-light irradiation drove cage re-assembly following re-isomerization of the diazo groups to the trans form, resulting in guest re-uptake. A detailed 19F NMR study elucidated how switching led to guest release: each metal vertex tolerated only one cis-azobenzene moiety, with further isomerization leading to cage disassembly.

Ancillary-Ligand-Assisted Variation in Nuclearities Leading to the Formation of Di-, Tri-, and Tetranuclear Copper(II) Complexes with Multifaceted Carboxylate Coordination Chemistry

The self-assembly of a carboxylate-based dinucleating ligand, N,N'-bis[2-carboxybenzomethyl]-N,N'-bis[2-pyridylmethyl]-1,3-diaminopropan-2-ol (H₃cpdp), and copper(II) ions in the presence of various exogenous ancillary ligands results in the formation of the new dinuclear complex [Cu₂(cpdp)(μ-Hisophth)]₄·2H₂isophth·21H₂O (1), trinuclear complex [Cu₃(Hcpdp)(Cl)₄] (2), and tetranuclear complex [Cu₄(cpdp)(μ-Hphth)(μ₄-phth)(piconol)(Cl)₂]·3H₂O (3) (H₂phth = phthalic acid; H₂isophth = isophthalic acid; piconol = 2-pyridinemethanol; Cl^- = chloride). In methanol-water, the reaction of H₃cpdp with CuCl₂·2H₂O at room temperature leads to the formation of 2. On the other hand, 1 and 3 have been obtained by carrying out the reaction of H₃cpdp with CuCl₂·2H₂O/m-C₆H₄(CO₂Na)₂ and CuCl₂·2H₂O/o-C₆H₄(CO₂Na)₂/piconol, respectively, in methanol-water in the presence of NaOH at ambient temperature. All three complexes have been characterized by elemental analysis, molar electrical conductivity and magnetic moment measurements, FTIR, UV-vis spectroscopy, and PXRD, including single-crystal X-ray structural analyses. The molecular structure of 1 is based on a μ-alkoxide and μ-isophthalate-bridged dimeric [Cu₂] core; the structure of 2 represents a trimeric [Cu₃] core in which a μ-alcohol-bridged dinuclear [Cu₂] unit is exclusively coupled with a [CuCl₂] species by two μ:η¹:η¹-syn-anti carboxylate groups forming a triangular motif; the structure of 3 embodies a tetrameric [Cu₄] core, with two copper(II) ions in a distorted-octahedral coordination environment, one copper(II) ion in a distorted-trigonal-bipyramidal coordination environment, and the other copper(II) ion in a square-planar coordination environment. In fact, 2 and 3 represent rare examples of copper(II)-based multinuclear complexes showing outstanding features of rich coordination chemistry: (i) using a symmetrical dinucleating ligand, trinuclear complex 2 is generated with four- and five-coordination environments around copper(II) ions; (ii) the unsymmetrical tetranuclear complex 3 is obtained by using the same ligand with four-, five- and six-coordination environments around copper(II) ions; (iii) tetracopper(II) complex 3 shows four different bridging modes of carboxylate groups simultaneously such as μ:η², μ:η¹:η¹, μ₃:η²:η¹:η¹, and μ₄:η¹:η¹:η¹:η¹, the μ₄:η¹:η¹:η¹:η¹ mode of phthalate being unprecedented. The formation of these [Cu₂], [Cu₃], and [Cu₄] complexes can be controlled by changing the exogenous ancillary ligands and pH of the reaction solutions, thus allowing an effective tuning of the self-assembly. The magnetic susceptibility measurements suggest that the copper centers in all three complexes are antiferromagnetically coupled. The thermal properties of 1-3 have been investigated by thermogravimetric and differential thermal analytical (TGA and DTA) techniques, indicating that the decomposition of all three complexes proceeds via multistep processes.

Challenges and opportunities for chiral covalent organic frameworks

As highly versatile crystalline porous materials, covalent organic frameworks (COFs) have emerged as an ideal platform for developing novel functional materials, attributed to their precise tunability of structure and functionality. Introducing chiral functional units into frameworks produces chiral COFs (CCOFs) with chiral superiorities through chirality conservation and conversion processes. This review summarises recent research progress in CCOFs, including synthetic methods, chiroptical characterisations, and their applications in asymmetric catalysis, chiral separation, and enantioselective recognition and sensing. Challenges and limitations are discussed to uncover future opportunities in CCOF research.

Impact of Host Flexibility on Selectivity in a Supramolecular Host-Catalyzed Enantioselective aza-Darzens Reaction

A highly enantioselective aza-Darzens reaction (up to 99% ee) catalyzed by an enantiopure supramolecular host has been discovered. To understand the role of host structure on reaction outcome, nine new gallium(III)-based enantiopure supramolecular assemblies were prepared via substitution of the external chiral amide. Despite the distal nature of the substitution in these catalysts, changes in enantioselectivity (61 to 90% ee) in the aziridine product were observed. The enantioselectivities were correlated to the flexibility of the supramolecular host scaffold as measured by the kinetics of exchange of a model cationic guest. This correlation led to the development of a best-in-class catalyst by substituting the gallium(III)-based host with one based on indium(III), which generated the most flexible and selective catalyst.

Transformation networks of metal-organic cages controlled by chemical stimuli

The flexibility of biomolecules enables them to adapt and transform as a result of signals received from the external environment, expressing different functions in different contexts. In similar fashion, coordination cages can undergo stimuli-triggered transformations owing to the dynamic nature of the metal-ligand bonds that hold them together. Different types of stimuli can trigger dynamic reconfiguration of these metal-organic assemblies, to switch on or off desired functionalities. Such adaptable systems are of interest for applications in switchable catalysis, selective molecular recognition or as transformable materials. This review highlights recent advances in the transformation of cages using chemical stimuli, providing a catalogue of reported strategies to transform cages and thus allow the creation of new architectures. Firstly we focus on strategies for transformation through the introduction of new cage components, which trigger reconstitution of the initial set of components. Secondly we summarize conversions triggered by external stimuli such as guests, concentration, solvent or pH, highlighting the adaptation processes that coordination cages can undergo. Finally, systems capable of responding to multiple stimuli are described. Such systems constitute composite chemical networks with the potential for more complex behaviour. We aim to offer new perspectives on how to design transformation networks, in order to shed light on signal-driven transformation processes that lead to the preparation of new functional metal-organic architectures.

Beyond Platonic: How to Build Metal-Organic Polyhedra Capable of Binding Low-Symmetry, Information-Rich Molecular Cargoes

The field of metallosupramolecular chemistry has advanced rapidly in recent years. Much work in this area has focused on the formation of hollow self-assembled metal-organic architectures and exploration of the applications of their confined nanospaces. These discrete, soluble structures incorporate metal ions as 'glue' to link organic ligands together into polyhedra.Most of the architectures employed thus far have been highly symmetrical, as these have been the easiest to prepare. Such high-symmetry structures contain pseudospherical cavities, and so typically bind roughly spherical guests. Biomolecules and high-value synthetic compounds are rarely isotropic, highly-symmetrical species. To bind, sense, separate, and transform such substrates, new, lower-symmetry, metal-organic cages are needed. Herein we summarize recent approaches, which taken together form the first draft of a handbook for the design of higher-complexity, lower-symmetry, self-assembled metal-organic architectures.

Templation and Concentration Drive Conversion Between a FeII12L12 Pseudoicosahedron, a FeII4L4 Tetrahedron, and a FeII2L3 Helicate

We report the construction of three structurally distinct self-assembled architectures: FeII12L12 pseudoicosahedron 1, FeII2L3 helicate 2, and FeII4L4 tetrahedron 3, formed from a single triazatriangulenium subcomponent A under different reaction conditions. Pseudoicosahedral capsule 1 is the largest formed through subcomponent self-assembly to date, with an outer-sphere diameter of 5.4 nm and a cavity volume of 15 nm3. The outcome of self-assembly depended upon concentration, where the formation of pseudoicosahedron 1 was favored at higher concentrations, while helicate 2 exclusively formed at lower concentrations. The conversion of pseudoicosahedron 1 or helicate 2 into tetrahedron 3 occurred following the addition of a CB11H12- or B12F122- template.

Solvent and Counteranion Assisted Dynamic Self-Assembly of Molecular Triangles and Tetrahedral Cages

Self-assembly of naked Pd^II ions separately with newly designed bis(3-pyridyl)benzothiadiazole (L1) and bis(3-pyridyl)thiazolo[5,4-d]thiazole (L2) donors separately, under varying experimental conditions, yielded Pd₄L₈ (L= L1 or L2) tetrahedral cages and their homologous Pd₃L₆ (L= L1 or L2) double-walled triangular macrocycles. The resulting assemblies exhibited solvent, temperature, and counteranion induced dynamic equilibrium. Treatment of L1 with Pd(BF₄)₂ in acetonitrile (ACN) resulted in selective formation of a tetrahedral cage [Pd₄(L1)₈](BF₄)₈ (1a), which is in dynamic equilibrium with its homologue triangle [Pd₃(L1)₆](BF₄)₆ (2a) in dimethyl sulfoxide (DMSO). On the other hand, similar self-assembly using L2 instead of L1 yielded an equilibrium mixture of tetrahedral cage [Pd₄(L2)₈](BF₄)₈ (3a) and triangle [Pd₃(L2)₆](BF₄)₆ (4a) forms in both ACN and DMSO. The assembles were characterized by multinuclear NMR and ESI-MS while the structure of the tetrahedral cage (1a) was determined by single crystal X-ray diffraction. Existence of a dynamic equilibrium between the assemblies in solution has been investigated via variable temperature ¹H NMR. The equilibrium constant K = ([Pd₄L₈]³/[Pd₃L₆]⁴) was calculated at each experimental temperature and fitted with the Van't Hoff equation to determine the standard enthalpy (ΔH°) and entropy (ΔS°) associated with the interconversion of the double-walled triangle to tetrahedral cage. The thermodynamic feasibility of structural interconversion was analyzed from the change in ΔG°, which suggests favorable conversion of Pd₃L₆ triangle to Pd₄L₈ cage at elevated temperature for L1 in DMSO and L2 in ACN. Interestingly, similar self-assembly reactions of L1 and L2 with Pd(NO₃)₂ instead of Pd(BF₄)₂ resulted in selective formation of a tetrahedral cage [Pd₄(L1)₈](NO₃)₈ (1b) and double-walled triangle [Pd₃(L2)₆](NO₃)₆ (4b), respectively.

Self-Assembly of Octanuclear PtII/PdII Coordination Barrels and Uncommon Structural Isomerization of a Photochromic Guest in Molecular Space

Two tetragonal molecular barrels TB1 and TB2 were successfully synthesized by coordination-driven self-assembly of a tetrapyridyl donor (L) of the thiazolo[5,4-d]thiazole backbone with cis-blocked 90° Pd(II) and Pt(II) acceptors, respectively. The single-crystal structure analysis of TB1 revealed the formation of a two-face opened tetragonal Pd8 molecular barrel architecture. In contrast, the isostructural Pt(II) barrel (TB2) is water-soluble. The large confined hydrophobic molecular cavity including wide open windows and good water solubility of the barrel TB2 made it a potential molecular container for the encapsulation of guests with different sizes and properties. This has been exploited to encapsulate and stabilize the open form of a photochromic molecule (G2) in water, while the same photochromic molecule exists exclusively in a cyclic zwitterionic form in aqueous medium in the absence of the barrel TB2. This cyclic form is very stable in water and does not go back to its parent open form under common external stimuli. Surprisingly, reverse switching of the cyclic form to a colored hydrophobic open form was also possible instantly in water upon addition of the solid barrel TB2 into an aqueous solution of G2. Such a fast reverse isomerization of an irreversible process in aqueous medium by utilizing host-guest interaction of the barrel TB2 and the guest G2 is interesting. The barrel TB2 was also capable of encapsulating the water-insoluble radical initiator G1 in aqueous medium.

Silver(I)-Carbene Bond-Directed Rigidification-Induced Emissive Metallacage for Picric Acid Detection

A new triphenylamine-based tetraimidazolium salt L was developed for silver(I)-carbene bond-directed synthesis of tetranuclear silver(I) octacarbene ([Ag₄(L)₂](PF₆)₄) metallacage 1. Interestingly, after assembly formation, metallacage 1 showed a nine-fold emission enhancement in dilute solution while ligand L was weakly fluorescent. This is attributed to the rigidity induced to the system by metal-carbene bond formation where the metal center acts as a rigidification unit. The enhanced emission intensity in dilute solution and the presence of the triphenylamine core made 1 a potential candidate for recognition of picric acid (PA). This recognition can be ascribed to the dual effect of ground-state charge-transfer complex formation and resonance energy transfer between the picrate and metallacage 1. For metallacage 1, a considerable detection limit toward PA was observed. The use of such metal-carbene bond-directed rigidification-induced enhanced emission for PA sensing is noteworthy.

Controlling the Complexity and Interconversion Mechanisms in Self-Assembled [Fe2 L3 ]4+ Helicates and [Fe4 L6 ]8+ Cages

Self-assembled coordination cages and metal-organic frameworks have relied extensively on symmetric ligands in their formation. Here we have prepared a relatively simple system employing an unsymmetric ligand that results in two distinct self-assembled structures, a [Fe₂ L₃ ]⁴⁺ helicate and a [Fe₄ L₆ ]⁸⁺ cage composed of 10 interconverting diastereomers and their enantiomers. We show that the steric profile of the ligand controls the complexity, thermodynamics and kinetics of interconversion of the system.

The kinetics and mechanism of interconversion within a system of [Fe2L3]4+ helicates and [Fe4L6]8+ cages

Nature builds simple molecules into highly complex assemblies, which are involved in all fundamental processes of life. Some of the most intriguing biological assemblies are those that can be precisely reconfigured to achieve different functions using the same building blocks. Understanding the reconfiguration of synthetic self-assembled systems will allow us to better understand the complexity of proteins and design useful artificial chemical systems. Here we have prepared a relatively simple system in which two distinct self-assembled structures, a [Fe2L3]4+ helicate and a [Fe4L6]8+ cage that are formed from the same precursors, coexist at equilibrium. We have measured the rates of interconversion of these two species and propose a mechanism for the transformation.

A Self-Assembled Palladium(II) Barrel for Binding of Fullerenes and Photosensitization Ability of the Fullerene-Encapsulated Barrel

Fullerene extracts obtained from fullerene soot lack their real application due to their poor solubility in common solvents and difficulty in purification. Encapsulation of these extracts in a suitable host is an important approach to address these issues. We present a new Pd₆ barrel (1), which is composed of three 1,4-dihydropyrrolo[3,2-b]pyrrole panels, clipped through six cis-Pd^II acceptors. Large open windows and cavity make it an efficient host for a large guest. Favorable interactions between the ligand and fullerene (C₆₀ and C₇₀ ) allows the barrel to encapsulate fullerene efficiently. Thorough investigation reveals that barrel 1 has a stronger binding affinity towards C₇₀ over C₆₀ , resulting in the predominant extraction of C₇₀ from a mixture of the two. Finally, the fullerene encapsulated barrels C₆₀ ⊂1 and C₇₀ ⊂1 were found to be efficient for visible-light-induced singlet oxygen generation. Such preferential binding of C₇₀ and photosensitizing ability of C₆₀ ⊂1 and C₇₀ ⊂1 are noteworthy.

Control of guest binding behavior of metal-containing host molecules by ligand exchange

This review describes the control of guest binding behavior of metal-containing host molecules that is driven by ligand exchange reactions at the metal centers. Recently, a vast number of metal-containing host molecules including metal-assisted self-assembled structures have been developed, and the structural transformation after construction of the host framework has now been of interest from the viewpoint of functional switching and tuning. Among the various kinds of chemical transformations, ligand exchange has a great advantage in the structural conversions of metal-containing hosts, because ligand exchange usually proceeds under mild conditions that do not affect the host framework. In this review, the structural transformations are classified into three types: (1) weak-link approach, (2) subcomponent substitution, and (3) post-metalation modification, according to the type of coordination motif. The control of their guest binding behavior by the structural transformations is discussed in detail.

Guest-Reaction Driven Cage to Conjoined Twin-Cage Mitosis-Like Host Transformation

We report here a guest-reaction-induced mitosis-like host transformation from a known Pd₄ L₂ cage 1 to a conjoined Pd₆ L₃ twin-cage 2 featuring two separate cavities. The encapsulation of 1-hydroxymethyl-2-naphthol (G1), a known ortho-quinone methide (o-QMs) precursor, within the hydrophobic cavity of cage 1 is found crucial to realize the cage to twin-cage conversion. Confined G1 molecules within the nanocavity undergo self-coupling dimerization reaction to form 2,2'-dihydroxy-1,1'-dinaphthylmethane (G2) which then triggers the cage to twin-cage mitosis. The same conversion also proceeds, in a much faster rate, via the direct templation of G2, confirming the induced-fit transformation mechanism. The structure of the (G2)₂ ⊂2 host-guest complex has been established by X-ray crystallographic study, where cis- to trans- conformational switch on one bridging ligand is revealed.

Nucleation of Tiny Silver Nanoparticles by Using a Tetrafacial Organic Molecular Barrel: Potential Use in Visible-Light-Triggered Photocatalysis

Coordination-driven self-assembly of discrete molecular architectures of diverse shapes and sizes has been well studied in the last three decades. Use of dynamic imine bonds for designing analogous metal-free architectures has become a growing challenge recently. This article reports an organic molecular barrel (OB4^R ) as a potential template for nucleation and stabilization of very tiny (<1.5 nm) Ag nanoparticles (AgNPs). Imine bond condensation of a rigid tetra-aldehyde with a flexible diamine followed by imine-bond reduction yielded the discrete tetragonal organic barrel (OB4^R ). The presence of a molecular pocket ornamented with eight diamine moieties gives the potential for encapsulation of silver(I). The organic barrel was finally used as a molecular vessel for the controlled nucleation of silver nanoparticles (AgNPs) with fine size tuning through binding of Ag^I ions in the confined space of the barrel followed by reduction. Transmission electron microscopy (TEM) analysis of the Ag⁰ @OB4^R composite revealed that the mean particle size is 1.44±0.16 nm. The composite material has approximately 52 wt % silver loading. The barrel-supported ultrafine AgNPs [Ag⁰ @OB4^R ] are found to be an efficient photocatalyst for facile Ullmann-type aryl-amination coupling of haloarenes at ambient temperature without using any additives. The catalyst was stable for several cycles of reuse without any agglomeration. The new composite Ag⁰ @OB4^R represents the first example of discrete organic barrel-supported AgNPs employed as a photocatalyst in Ullmann-type coupling reactions at room temperature.

Coordination-driven self-assembly of discrete supramolecular double-metallacycles

This review comprehensively summarizes the recent advances in the coordination-driven self-assembly of discrete supramolecular double-metallacycles.