1
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Mondal S, Zhang W, Zhang S. Thermodynamics of Proton-Coupled Electron Transfer at Tricopper μ-Oxo/Hydroxo/Aqua Complexes. J Am Chem Soc 2024; 146:15036-15044. [PMID: 38770819 DOI: 10.1021/jacs.3c14420] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/22/2024]
Abstract
Multicopper oxidases (MCOs) utilize a tricopper active site to reduce dioxygen to water through 4H+ 4e- proton-coupled electron transfer (PCET). Understanding the thermodynamics of PCET at a tricopper cluster is essential for elucidating how MCOs harness the oxidative power of O2 while mitigating oxidative damage. In this study, we determined the O-H bond dissociation free energies (BDFEs) and pKa values of a series of tricopper hydroxo and tricopper aqua complexes as synthetic models of the tricopper site in MCOs. Tricopper intermediates on the path of alternating electron and proton transfer (ET-PT-ET-PT-ET) have modest BDFE(O-H) values in the range of 53.0-57.1 kcal/mol. In contrast, those not on the path of ET-PT-ET-PT-ET display much higher (78.1 kcal/mol) or lower (44.7 kcal/mol) BDFE(O-H) values. Additionally, the pKa of bridging OH and OH2 motifs increase by 8-16 pKa units per oxidation state. The same oxidation state changes have a lesser impact on the pKa of N-H motif in the secondary coordination sphere, with an increase of ca. 5 pKa units per oxidation state. The steeper pKa increase of the tricopper center promotes proton transfer from the secondary coordination sphere. Overall, our study shed light on the PCET pathway least prone to decomposition, elucidating why tricopper centers are an optimal choice for promoting efficient oxygen reduction reaction.
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Affiliation(s)
- Saikat Mondal
- Department of Chemistry & Biochemistry, The Ohio State University, 100 West 18th Avenue, Columbus, Ohio 43210, United States
| | - Weiyao Zhang
- Department of Chemistry & Biochemistry, The Ohio State University, 100 West 18th Avenue, Columbus, Ohio 43210, United States
| | - Shiyu Zhang
- Department of Chemistry & Biochemistry, The Ohio State University, 100 West 18th Avenue, Columbus, Ohio 43210, United States
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2
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Proe KR, Towarnicky A, Fertig A, Lu Z, Mpourmpakis G, Matson EM. Impact of Surface Ligand Identity and Density on the Thermodynamics of H Atom Uptake at Polyoxovanadate-Alkoxide Surfaces. Inorg Chem 2024; 63:7206-7217. [PMID: 38592922 DOI: 10.1021/acs.inorgchem.3c04435] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/11/2024]
Abstract
An understanding of how molecular structure influences the thermodynamics of H atom transfer is critical to designing efficient catalysts for reductive chemistries. Herein, we report experimental and theoretical investigations summarizing structure-function relationships of polyoxovanadate-alkoxides that influence bond dissociation free energies of hydroxide ligands located at the surface of the cluster. We evaluate the thermochemical descriptors of O-H bond strength for a series of clusters, namely [V6O13-x(OH)x(TRIOLR)2]-2 (x = 2, 4, 6; R = NO2, Me) and [V6O11-x(OMe)2(OH)x(TRIOLNO2)2]-2, via computational analysis and open circuit potential measurements. Our findings reveal that modifications to the TRIOL ligand (e.g., changing from the previously reported electron withdrawing nitro-backed ligand to the electron-donating methyl variant) have limited influence on the strength of surface O-H bonds as a result of near complete thermodynamic compensation in these systems (i.e., correlated changes in redox potential and cluster basicity). In contrast, changes in surface density of alkoxide ligands via direct alkoxylation of the polyoxovanadate-alkoxide surface result in measurable increases in bond dissociation free energies of surface O-H bonds for the mixed-valent derivatives. Our findings indicate that the extent of (de)localization of electron density across the cluster core has an impact on the bond dissociation free energies of surface O-H bonds across all oxidation states of the assembly.
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Affiliation(s)
- Kathryn R Proe
- Department of Chemistry, University of Rochester, Rochester, New York 14627, United States
| | - Andreas Towarnicky
- Department of Chemical Engineering, University of Pittsburgh, Pittsburgh, Pennsylvania 15261, United States
| | - Alex Fertig
- Department of Chemistry, University of Rochester, Rochester, New York 14627, United States
| | - Zhou Lu
- Department of Chemistry, University of Rochester, Rochester, New York 14627, United States
| | - Giannis Mpourmpakis
- Department of Chemical Engineering, University of Pittsburgh, Pittsburgh, Pennsylvania 15261, United States
| | - Ellen M Matson
- Department of Chemistry, University of Rochester, Rochester, New York 14627, United States
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3
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Lionetti D, Suseno S, Shiau AA, de Ruiter G, Agapie T. Redox Processes Involving Oxygen: The Surprising Influence of Redox-Inactive Lewis Acids. JACS AU 2024; 4:344-368. [PMID: 38425928 PMCID: PMC10900226 DOI: 10.1021/jacsau.3c00675] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/31/2023] [Revised: 12/12/2023] [Accepted: 12/13/2023] [Indexed: 03/02/2024]
Abstract
Metalloenzymes with heteromultimetallic active sites perform chemical reactions that control several biogeochemical cycles. Transformations catalyzed by such enzymes include dioxygen generation and reduction, dinitrogen reduction, and carbon dioxide reduction-instrumental transformations for progress in the context of artificial photosynthesis and sustainable fertilizer production. While the roles of the respective metals are of interest in all these enzymatic transformations, they share a common factor in the transfer of one or multiple redox equivalents. In light of this feature, it is surprising to find that incorporation of redox-inactive metals into the active site of such an enzyme is critical to its function. To illustrate, the presence of a redox-inactive Ca2+ center is crucial in the Oxygen Evolving Complex, and yet particularly intriguing given that the transformation catalyzed by this cluster is a redox process involving four electrons. Therefore, the effects of redox inactive metals on redox processes-electron transfer, oxygen- and hydrogen-atom transfer, and O-O bond cleavage and formation reactions-mediated by transition metals have been studied extensively. Significant effects of redox inactive metals have been observed on these redox transformations; linear free energy correlations between Lewis acidity and the redox properties of synthetic model complexes are observed for several reactions. In this Perspective, these effects and their relevance to multielectron processes will be discussed.
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Affiliation(s)
| | - Sandy Suseno
- Division of Chemistry and
Chemical Engineering, California Institute
of Technology, 1200 East California Boulevard, MC 127-72, Pasadena, California 91125, United States
| | - Angela A. Shiau
- Division of Chemistry and
Chemical Engineering, California Institute
of Technology, 1200 East California Boulevard, MC 127-72, Pasadena, California 91125, United States
| | - Graham de Ruiter
- Division of Chemistry and
Chemical Engineering, California Institute
of Technology, 1200 East California Boulevard, MC 127-72, Pasadena, California 91125, United States
| | - Theodor Agapie
- Division of Chemistry and
Chemical Engineering, California Institute
of Technology, 1200 East California Boulevard, MC 127-72, Pasadena, California 91125, United States
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4
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Schreiber E, Fertig AA, Brennessel WW, Matson EM. Oxygen-Atom Defect Formation in Polyoxovanadate Clusters via Proton-Coupled Electron Transfer. J Am Chem Soc 2022; 144:5029-5041. [PMID: 35275632 PMCID: PMC8949770 DOI: 10.1021/jacs.1c13432] [Citation(s) in RCA: 11] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
![]()
The uptake of hydrogen
atoms (H-atoms) into reducible metal oxides
has implications in catalysis and energy storage. However, outside
of computational modeling, it is difficult to obtain insight into
the physicochemical factors that govern H-atom uptake at the atomic
level. Here, we describe oxygen-atom vacancy formation in a series
of hexavanadate assemblies via proton-coupled electron transfer, presenting
a novel pathway for the formation of defect sites at the surface of
redox-active metal oxides. Kinetic investigations reveal that H-atom
transfer to the metal oxide surface occurs through concerted proton–electron
transfer, resulting in the formation of a transient VIII–OH2 moiety that, upon displacement of the water
ligand with an acetonitrile molecule, forms the oxygen-deficient polyoxovanadate-alkoxide
cluster. Oxidation state distribution of the cluster core dictates
the affinity of surface oxido ligands for H-atoms, mirroring the behavior
of reducible metal oxide nanocrystals. Ultimately, atomistic insights
from this work provide new design criteria for predictive proton-coupled
electron-transfer reactivity of terminal M=O moieties at the
surface of nanoscopic metal oxides.
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Affiliation(s)
- Eric Schreiber
- Department of Chemistry, University of Rochester, Rochester, New York 14627, United States
| | - Alex A Fertig
- Department of Chemistry, University of Rochester, Rochester, New York 14627, United States
| | - William W Brennessel
- Department of Chemistry, University of Rochester, Rochester, New York 14627, United States
| | - Ellen M Matson
- Department of Chemistry, University of Rochester, Rochester, New York 14627, United States
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5
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Zhang W, Moore CE, Zhang S. Multiple Proton-Coupled Electron Transfers at a Tricopper Cluster: Modeling the Reductive Regeneration Process in Multicopper Oxidases. J Am Chem Soc 2022; 144:1709-1717. [PMID: 35044761 DOI: 10.1021/jacs.1c10948] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Metal clusters in enzymes carry out the life-sustaining reactions by accumulating multiple redox equivalents in a narrow potential range. This redox potential leveling effect commonly observed in Nature has yet to be reproduced with synthetic metal clusters. Herein, we employ a fully encapsulated synthetic tricopper complex to model the three-electron two-proton reductive regeneration of fully reduced trinuclear copper cluster CuICuICuI(μ2-OH2) (FR) from native intermediate CuIICuIICuII(μ3-O) (NI) in multicopper oxidases (MCOs). The tricopper cluster can access four oxidation states (I,I,I to II,II,II) and four protonation states ([Cu3(μ3-O)]LH, [Cu3(μ3-OH)]L, [Cu3(μ3-OH)]LH, and [Cu3(μ3-OH2)]L, where LH denotes the protonated ligand), allowing mechanistic investigation of proton-coupled electron transfer (PCET) relevant to MCOs. Seven tricopper complexes with discrete oxidation and protonation states were characterized with spectroscopy or X-ray single-crystal diffraction. A stepwise electron transfer-proton transfer (ET-PT) mechanism is established for the reduction of CuIICuIICuII(μ3-O)LH to CuIICuIICuI(μ3-OH)L, while a stepwise PT-ET mechanism is determined for the reduction of CuIICuICuI(μ3-OH)LH to CuICuICuI(μ2-OH2)L. The switch-over from ET-PT to PT-ET mechanism showcases that the tricopper complex can adopt different PCET mechanisms to circumvent high-barrier proton transfer steps. Overall, three-electron two-proton reduction occurs within a narrow potential range of 170 mV, exemplifying the redox potential leveling effect of secondary proton relays in delivering multiple redox equivalents at metal clusters.
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Affiliation(s)
- Weiyao Zhang
- Department of Chemistry and Biochemistry, The Ohio State University, 100 West 18th Avenue, Columbus, Ohio 43210, United States
| | - Curtis E Moore
- Department of Chemistry and Biochemistry, The Ohio State University, 100 West 18th Avenue, Columbus, Ohio 43210, United States
| | - Shiyu Zhang
- Department of Chemistry and Biochemistry, The Ohio State University, 100 West 18th Avenue, Columbus, Ohio 43210, United States
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6
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Thermally stable manganese(III) peroxido complexes with hindered N3 tripodal ligands: Structures and their physicochemical properties. J Inorg Biochem 2021; 225:111597. [PMID: 34547605 PMCID: PMC10019377 DOI: 10.1016/j.jinorgbio.2021.111597] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/24/2021] [Revised: 08/25/2021] [Accepted: 08/28/2021] [Indexed: 11/20/2022]
Abstract
Mononuclear manganese(III) peroxido complexes are candidates for the reaction intermediates in manganese containing proteins, such as manganese superoxide dismutase (Mn-SOD) etc. In this study, manganese(III) peroxido complexes [Mn(O2)(L3)] and [Mn(O2)(L10)] ligated by anionic N3 type ligands with sterically hindered substituents, hydrotris(3-tertiary butyl-5-isopropyl-1-pyrazolyl)borate (L3-) and hydrotris(3-adamantyl-5-isopropyl-1-pyrazolyl)borate (L10-), respectively, were structurally characterized. These complexes are the first examples of structurally characterized five-coordinate manganese(III) peroxido complexes. Their characteristic ν(OO) and ν(MnO) stretchings were determined by using H218O2 for the first time. Theoretical calculations were performed to obtain further insight into their structural parameters. The decomposed products were obtained as [{MnIII(μ-O)(L3)}2MnIV] and [MnIII(OH){L10(O)}] from [Mn(O2)(L3)] and [Mn(O2)(L10)], respectively.
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7
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Uvarova MA, Nefedov SE. Formation of a Cluster with the $${\text{M}}_{4}^{{{\text{II}}}}{\text{M}}_{2}^{{{\text{III}}}}$$ Metal Core upon the Oxidation of Manganese(II) Cymantrenecarboxylate Adduct with Air Oxygen in Tetrahydrofuran. RUSS J COORD CHEM+ 2021. [DOI: 10.1134/s1070328421110051] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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8
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Yamanoi Y, Nakae T, Nishihara H. Bio-organic-inorganic hybrid soft materials: photoelectric conversion systems based on photosystem I and II with molecular wires. CHEM LETT 2021. [DOI: 10.1246/cl.210111] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Affiliation(s)
- Yoshinori Yamanoi
- Department of Chemistry, School of Science, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-0033, Japan
| | - Toyotaka Nakae
- Department of Chemistry, School of Science, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-0033, Japan
| | - Hiroshi Nishihara
- Research Center for Science and Technology, Tokyo University of Science, 2641 Yamazaki, Noda-shi, Chiba 278-8510, Japan
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9
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Petel BE, Matson EM. Physicochemical Factors That Influence the Deoxygenation of Oxyanions in Atomically Precise, Oxygen-Deficient Vanadium Oxide Assemblies. Inorg Chem 2020; 60:6855-6864. [DOI: 10.1021/acs.inorgchem.0c02052] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
Affiliation(s)
- Brittney E. Petel
- Department of Chemistry, University of Rochester, Rochester, New York 14627, United States
| | - Ellen M. Matson
- Department of Chemistry, University of Rochester, Rochester, New York 14627, United States
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10
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Bezdek MJ, Pelczer I, Chirik PJ. Coordination-Induced N–H Bond Weakening in a Molybdenum Pyrrolidine Complex: Isotopic Labeling Provides Insight into the Pathway for H 2 Evolution. Organometallics 2020. [DOI: 10.1021/acs.organomet.0c00471] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Affiliation(s)
- Máté J. Bezdek
- Department of Chemistry, Princeton University, Princeton, New Jersey 08544, United States
| | - István Pelczer
- Department of Chemistry, Princeton University, Princeton, New Jersey 08544, United States
| | - Paul J. Chirik
- Department of Chemistry, Princeton University, Princeton, New Jersey 08544, United States
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11
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Lee HB, Marchiori DA, Chatterjee R, Oyala PH, Yano J, Britt RD, Agapie T. S = 3 Ground State for a Tetranuclear Mn IV4O 4 Complex Mimicking the S 3 State of the Oxygen-Evolving Complex. J Am Chem Soc 2020; 142:3753-3761. [PMID: 32013412 DOI: 10.1021/jacs.9b10371] [Citation(s) in RCA: 19] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
Abstract
The S3 state is currently the last observable intermediate prior to O-O bond formation at the oxygen-evolving complex (OEC) of Photosystem II, and its electronic structure has been assigned to a homovalent MnIV4 core with an S = 3 ground state. While structural interpretations based on the EPR spectroscopic features of the S3 state provide valuable mechanistic insight, corresponding synthetic and spectroscopic studies on tetranuclear complexes mirroring the Mn oxidation states of the S3 state remain rare. Herein, we report the synthesis and characterization by XAS and multifrequency EPR spectroscopy of a MnIV4O4 cuboidal complex as a spectroscopic model of the S3 state. Results show that this MnIV4O4 complex has an S = 3 ground state with isotropic 55Mn hyperfine coupling constants of -75, -88, -91, and 66 MHz. These parameters are consistent with an αααβ spin topology approaching the trimer-monomer magnetic coupling model of pseudo-octahedral MnIV centers. Importantly, the spin ground state changes from S = 1/2 to S = 3 as the OEC is oxidized from the S2 state to the S3 state. This same spin state change is observed following oxidation of the previously reported MnIIIMnIV3O4 cuboidal complex to the MnIV4O4 complex described here. This sets a synthetic precedent for the observed low-spin to high-spin conversion in the OEC.
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Affiliation(s)
- Heui Beom Lee
- Department of Chemistry and Chemical Engineering , California Institute of Technology , 1200 East California Boulevard MC 127-72 , Pasadena , California 91125 , United States
| | - David A Marchiori
- Department of Chemistry , University of California Davis , One Shields Avenue , Davis , California 95616 , United States
| | - Ruchira Chatterjee
- Molecular Biophysics and Integrated Bioimaging Division , Lawrence Berkeley National Laboratory , Berkeley , California 94720 , United States
| | - Paul H Oyala
- Department of Chemistry and Chemical Engineering , California Institute of Technology , 1200 East California Boulevard MC 127-72 , Pasadena , California 91125 , United States
| | - Junko Yano
- Molecular Biophysics and Integrated Bioimaging Division , Lawrence Berkeley National Laboratory , Berkeley , California 94720 , United States
| | - R David Britt
- Department of Chemistry , University of California Davis , One Shields Avenue , Davis , California 95616 , United States
| | - Theodor Agapie
- Department of Chemistry and Chemical Engineering , California Institute of Technology , 1200 East California Boulevard MC 127-72 , Pasadena , California 91125 , United States
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12
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Arnett CH, Kaiser JT, Agapie T. Remote Ligand Modifications Tune Electronic Distribution and Reactivity in Site-Differentiated, High-Spin Iron Clusters: Flipping Scaling Relationships. Inorg Chem 2019; 58:15971-15982. [PMID: 31738534 DOI: 10.1021/acs.inorgchem.9b02470] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
We report the synthesis, characterization, and reactivity of [LFe3O(RArIm)3Fe][OTf]2, the first Hammett series of a site-differentiated cluster. The cluster reduction potentials and CO stretching frequencies shift as expected on the basis of the electronic properties of the ligand: electron-donating substituents result in more reducing clusters and weaker C-O bonds. However, unusual trends in the energetics of their two sequential CO binding events with the substituent σp parameters are observed. Specifically, introduction of electron-donating substituents suppresses the first CO binding event (ΔΔH by as much as 7.9 kcal mol-1) but enhances the second (ΔΔH by as much as 1.9 kcal mol-1). X-ray crystallography, including multiple-wavelength anomalous diffraction, Mössbauer spectroscopy, and SQUID magnetometry, reveal that these substituent effects result from changes in the energetic penalty associated with electronic redistribution within the cluster, which occurs during the CO binding event.
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Affiliation(s)
- Charles H Arnett
- Division of Chemistry and Chemical Engineering , California Institute of Technology , Pasadena , California 91125 , United States
| | - Jens T Kaiser
- Division of Chemistry and Chemical Engineering , California Institute of Technology , Pasadena , California 91125 , United States
| | - Theodor Agapie
- Division of Chemistry and Chemical Engineering , California Institute of Technology , Pasadena , California 91125 , United States
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13
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Reed CJ, Agapie T. A Terminal Fe III-Oxo in a Tetranuclear Cluster: Effects of Distal Metal Centers on Structure and Reactivity. J Am Chem Soc 2019; 141:9479-9484. [PMID: 31083986 DOI: 10.1021/jacs.9b03157] [Citation(s) in RCA: 21] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
Abstract
Tetranuclear Fe clusters have been synthesized bearing a terminal FeIII-oxo center stabilized by hydrogen-bonding interactions from pendant ( tert-butylamino)pyrazolate ligands. This motif was supported in multiple Fe oxidation states, ranging from [FeII2FeIII2] to [FeIII4]; two oxidation states were structurally characterized by single-crystal X-ray diffraction. The reactivity of the FeIII-oxo center in proton-coupled electron transfer with X-H (X = C, O) bonds of various strengths was studied in conjunction with analysis of thermodynamic square schemes of the cluster oxidation states. These results demonstrate the important role of distal metal centers in modulating the reactivity of a terminal metal-oxo.
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Affiliation(s)
- Christopher J Reed
- Division of Chemistry and Chemical Engineering , California Institute of Technology , Pasadena , California 91125 , United States
| | - Theodor Agapie
- Division of Chemistry and Chemical Engineering , California Institute of Technology , Pasadena , California 91125 , United States
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14
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Bartholomew AK, Juda CE, Nessralla JN, Lin B, Wang SG, Chen Y, Betley TA. Ligand‐Based Control of Single‐Site vs. Multi‐Site Reactivity by a Trichromium Cluster. Angew Chem Int Ed Engl 2019. [DOI: 10.1002/ange.201901599] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
| | - Cristin E. Juda
- Department of Chemistry and Chemical Biology Harvard University 12 Oxford St. Cambridge MA 02138 USA
| | | | - Benjamin Lin
- Department of Chemistry and Chemical Biology Harvard University 12 Oxford St. Cambridge MA 02138 USA
| | - SuYin Grass Wang
- ChemMatCARS Beamline The University of Chicago Advanced Photon Source Argonne IL 60429 USA
| | - Yu‐Sheng Chen
- ChemMatCARS Beamline The University of Chicago Advanced Photon Source Argonne IL 60429 USA
| | - Theodore A. Betley
- Department of Chemistry and Chemical Biology Harvard University 12 Oxford St. Cambridge MA 02138 USA
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15
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Zahler CT, Shaw BF. What Are We Missing by Not Measuring the Net Charge of Proteins? Chemistry 2019; 25:7581-7590. [PMID: 30779227 DOI: 10.1002/chem.201900178] [Citation(s) in RCA: 16] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/12/2019] [Indexed: 12/21/2022]
Abstract
The net electrostatic charge (Z) of a folded protein in solution represents a bird's eye view of its surface potentials-including contributions from tightly bound metal, solvent, buffer, and cosolvent ions-and remains one of its most enigmatic properties. Few tools are available to the average biochemist to rapidly and accurately measure Z at pH≠pI. Tools that have been developed more recently seem to go unnoticed. Most scientists are content with this void and estimate the net charge of a protein from its amino acid sequence, using textbook values of pKa . Thus, Z remains unmeasured for nearly all folded proteins at pH≠pI. When marveling at all that has been learned from accurately measuring the other fundamental property of a protein-its mass-one wonders: what are we missing by not measuring the net charge of folded, solvated proteins? A few big questions immediately emerge in bioinorganic chemistry. When a single electron is transferred to a metalloprotein, does the net charge of the protein change by approximately one elementary unit of charge or does charge regulation dominate, that is, do the pKa values of most ionizable residues (or just a few residues) adjust in response to (or in concert with) electron transfer? Would the free energy of charge regulation (ΔΔGz ) account for most of the outer sphere reorganization energy associated with electron transfer? Or would ΔΔGz contribute more to the redox potential? And what about metal binding itself? When an apo-metalloprotein, bearing minimal net negative charge (e.g., Z=-2.0) binds one or more metal cations, is the net charge abolished or inverted to positive? Or do metalloproteins regulate net charge when coordinating metal ions? The author's group has recently dusted off a relatively obscure tool-the "protein charge ladder"-and used it to begin to answer these basic questions.
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Affiliation(s)
- Collin T Zahler
- Department of Chemistry and Biochemistry, Baylor University, Waco, TX, 76706, USA
| | - Bryan F Shaw
- Department of Chemistry and Biochemistry, Baylor University, Waco, TX, 76706, USA
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16
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Bartholomew AK, Juda CE, Nessralla JN, Lin B, Wang SG, Chen YS, Betley TA. Ligand-Based Control of Single-Site vs. Multi-Site Reactivity by a Trichromium Cluster. Angew Chem Int Ed Engl 2019; 58:5687-5691. [PMID: 30828957 DOI: 10.1002/anie.201901599] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/05/2019] [Indexed: 11/07/2022]
Abstract
The trichromium cluster (tbs L)Cr3 (thf) ([tbs L]6- =[1,3,5-C6 H9 (NC6 H4 -o-NSit BuMe2 )3 ]6- ) exhibits steric- and solvation-controlled reactivity with organic azides to form three distinct products: reaction of (tbs L)Cr3 (thf) with benzyl azide forms a symmetrized bridging imido complex (tbs L)Cr3 (μ3 -NBn); reaction with mesityl azide in benzene affords a terminally bound imido complex (tbs L)Cr3 (μ1 -NMes); whereas the reaction with mesityl azide in THF leads to terminal N-atom excision from the azide to yield the nitride complex (tbs L)Cr3 (μ3 -N). The reactivity of this complex demonstrates the ability of the cluster-templating ligand to produce a well-defined polynuclear transition metal cluster that can access distinct single-site and cooperative reactivity controlled by either substrate steric demands or reaction media.
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Affiliation(s)
| | - Cristin E Juda
- Department of Chemistry and Chemical Biology, Harvard University, 12 Oxford St., Cambridge, MA, 02138, USA
| | - Jonathon N Nessralla
- Department of Chemistry, University of California, Berkeley, Berkeley, CA, 94720, USA
| | - Benjamin Lin
- Department of Chemistry and Chemical Biology, Harvard University, 12 Oxford St., Cambridge, MA, 02138, USA
| | - SuYin Grass Wang
- ChemMatCARS Beamline, The University of Chicago, Advanced Photon Source, Argonne, IL, 60429, USA
| | - Yu-Sheng Chen
- ChemMatCARS Beamline, The University of Chicago, Advanced Photon Source, Argonne, IL, 60429, USA
| | - Theodore A Betley
- Department of Chemistry and Chemical Biology, Harvard University, 12 Oxford St., Cambridge, MA, 02138, USA
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17
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Niu RJ, Zhou WF, Liu Y, Yang JY, Zhang WH, Lang JP, Young DJ. Morphology-dependent third-order optical nonlinearity of a 2D Co-based metal-organic framework with a porphyrinic skeleton. Chem Commun (Camb) 2019; 55:4873-4876. [PMID: 30951050 DOI: 10.1039/c9cc01363f] [Citation(s) in RCA: 26] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Abstract
A two-dimensional (2D) Co-based metal-organic framework (MOF) with porphyrinic skeleton forms crystalline plates, flower-shaped clusters, and ultrathin films under optimized conditions, including the use of polyvinylpyrrolidone (PVP) as a surfactant. Ultrathin films demonstrate the best solution-based third-order nonlinear optical properties, featuring a nonlinear transmittance (T) value of 0.54, absorption coefficient (α2) of 9.5 × 10-10 m W-1 and second hyperpolarizability (γ) value of 1.37 × 10-28 esu, which are slightly better than those of the flower-shaped clusters (T = 0.65, α2 = 7.0 × 10-10 m W-1; γ = 1.27 × 10-28 esu), but marginally better than those of the crystalline thin plates (T = 0.94, α2 = 2.4 × 10-10 m W-1; γ = 0.24 × 10-28 esu).
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Affiliation(s)
- Ru-Jie Niu
- College of Chemistry, Chemical Engineering and Materials Science, Soochow University, Suzhou 215123, China.
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Synthesis, Characterization and Magnetic Studies of a Tetranuclear Manganese(II/IV) Compound Incorporating an Amino-Alcohol Derived Schiff Base. MAGNETOCHEMISTRY 2018. [DOI: 10.3390/magnetochemistry4040057] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
A new tetranuclear mixed-valence manganese(II/IV) compound [MnIIMnIV3(μ-Cl)3(µ3-O)(L)3] (1) (where H3L = (3E)-3-((Z)-4-hydroxy-4-phenylbut-3-en-2-ylideneamino)propane-1,2-diol) has been synthesized and characterized by different physicochemical methods. Single crystal X-ray diffraction analysis reveals that 1 is a tetrahedral cluster consisting of a Mn4Cl3O4 core in which the only Mn(II) ion is joined through three μ2-O bridges to an equilateral triangle of Mn(IV) ions, which are connected by a μ3-O and three μ2-Cl bridges. The redox behavior of 1 was studied by cyclic voltammetry. Variable temperature magnetic susceptibility measurements of 1 revealed predominant antiferromagnetic coupling inside the Mn4Cl3O4 cluster.
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