1
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Marsh D. Rate constants for saturation-recovery EPR and ELDOR of 14N-Spin labels. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 2023; 350:107414. [PMID: 36913743 DOI: 10.1016/j.jmr.2023.107414] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/01/2022] [Revised: 02/21/2023] [Accepted: 03/02/2023] [Indexed: 05/10/2023]
Abstract
Saturation-recovery (SR)-EPR can determine electron spin-lattice relaxation rates in liquids over a wide range of effective viscosity, making it especially useful for biophysical and biomedical applications. Here, I develop exact solutions for the SR-EPR and SR-ELDOR rate constants of 14N-nitroxyl spin labels as a function of rotational correlation time and spectrometer operating frequency. Explicit mechanisms for electron spin-lattice relaxation are: rotational modulation of the N-hyperfine and electron-Zeeman anisotropies (specifically including cross terms), spin-rotation interaction, and residual frequency-independent vibrational contributions from Raman processes and local modes. Cross relaxation from mutual electron and nuclear spin flips, and direct nitrogen nuclear spin-lattice relaxation, also must be included. Both the latter are further contributions from rotational modulation of the electron-nuclear dipolar interaction (END). All the conventional liquid-state mechanisms are defined fully by the spin-Hamiltonian parameters; only the vibrational contributions contain fitting parameters. This analysis gives a firm basis for interpreting SR (and inversion recovery) results in terms of additional, less standard mechanisms.
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Affiliation(s)
- Derek Marsh
- Max-Planck Institute for Multidisciplinary Sciences, 37070 Göttingen, Germany(1).
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2
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Koyama S, Sato K, Yamashita M, Sakamoto R, Iguchi H. Observation of slow magnetic relaxation phenomena in spatially isolated π-radical ions. Phys Chem Chem Phys 2023; 25:5459-5467. [PMID: 36748343 DOI: 10.1039/d2cp06026d] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
Abstract
The use of molecular spins as quantum bits is fascinating because it offers a wide range of strategies through chemical modifications. In this regard, it is very interesting to search for organic radical ions that have small spin-orbit coupling values. On the other hand, the feature of the magnetic relaxation of π-organic radical ions is rarely exploited due to the difficulty of spin dilution, and π-stacking interaction. In this study, we focus on N,N',N''-tris(2,6-dimethylphenyl)benzenetriimide (BTI-xy), where three xylene moieties connected to the imide groups cover the π-plane of the BTI core. As a result, BTI-xy radical anions without π-stacking interaction were obtained. This led to the slow magnetization relaxation, which is reported for the first time in organic radicals. Furthermore, the relaxation times in a solution state revealed the importance of spin interaction.
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Affiliation(s)
- Shohei Koyama
- Department of Chemistry, Graduate School of Science, Tohoku University, 6-3 Aramaki-Aza-Aoba, Aoba-ku, Sendai, 980-8578, Japan.
| | - Kazunobu Sato
- Department of Chemistry, Graduate School of Science, Osaka Metropolitan University, 3-3-138 Sugimoto, Sumiyoshi-ku, Osaka 558-8585, Japan
| | - Masahiro Yamashita
- Department of Chemistry, Graduate School of Science, Tohoku University, 6-3 Aramaki-Aza-Aoba, Aoba-ku, Sendai, 980-8578, Japan. .,School of Materials Science and Engineering, Nankai University, Tianjin 300350, P. R. China
| | - Ryota Sakamoto
- Department of Chemistry, Graduate School of Science, Tohoku University, 6-3 Aramaki-Aza-Aoba, Aoba-ku, Sendai, 980-8578, Japan.
| | - Hiroaki Iguchi
- Department of Materials Chemistry, Graduate School of Engineering, Nagoya University, Furo-cho, Chikusa-ku, Nagoya 464-8603, Japan.
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3
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McKenzie I, Scheuermann R, Tucker I, Mulley BP. Dynamics and local environment of an aromatic counterion bound to di-chain cationic surfactant bilayers studied by avoided level crossing muon spin resonance: evidence for counterion condensation. Phys Chem Chem Phys 2021; 23:25542-25549. [PMID: 34779806 DOI: 10.1039/d1cp04575j] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Avoided level crossing muon spin resonance (ALC-μSR) has been used to study the reorientational dynamics of muon-spin-labelled 2,4,6-trimethylbenzoate (246TMB-) counterions and their interaction with DODMAC (dioctadecyldimethylammonium chloride) bilayers in the Lα and Lβ liquid crystalline states. The muoniated radical anion formed by the addition of muonium to the secondary carbons of the aromatic ring of 246TMB- is used as a local spin probe. The muon and methylene proton hyperfine parameters and the electron spin relaxation rate (λe) of the muoniated spin probe were determined as a function of temperature by modelling the ALC-μSR spectra with Monte Carlo numerical simulations. The observation of a Δ1 resonance indicates that 246TMB- is undergoing anisotropic motion and doesn't reside in the aqueous layer in either the Lα and Lβ phases. The lack of an abrupt change in the hyperfine parameters or λe when the system goes from the Lβ to the Lα lamellar liquid crystalline phases suggests that 246TMB- is located at the oil-water interface rather than within the bilayer. The hyperfine parameters indicate that 246TMB- is undergoing large amplitude reorientational motion about a preferred orientation resulting from the bilayer's electric field. The interaction between 246TMB- and the bilayer decreases and the amplitude of the wobbling-in-a-cone motion increases with increasing temperature. The temperature dependence of the electron spin relaxation rate indicates the barrier to reorientation is 41.7 kJ mol-1.
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Affiliation(s)
- Iain McKenzie
- Centre for Molecular and Materials Science, TRIUMF, Vancouver, Canada. .,Department of Chemistry, Simon Fraser University, Burnaby, Canada.,Department of Physics and Astronomy, University of Waterloo, Waterloo, Canada
| | - Robert Scheuermann
- Laboratory for Muon Spin Spectroscopy, Paul Scherrer Institut, Villigen AG, Switzerland
| | - Ian Tucker
- 60 Springfields, Mickle Trafford, Chester, CH2 4EG, UK
| | - Brian P Mulley
- Centre for Molecular and Materials Science, TRIUMF, Vancouver, Canada. .,Department of Chemistry, University of Waterloo, Waterloo, Canada
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4
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Dale MW, Cheney DJ, Vallotto C, Wedge CJ. Viscosity effects on optically generated electron and nuclear spin hyperpolarization. Phys Chem Chem Phys 2020; 22:28173-28182. [PMID: 33291127 DOI: 10.1039/d0cp04012f] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
Abstract
Spin hyperpolarization can dramatically increase signal intensities in magnetic resonance experiments, providing either improved bulk sensitivity or additional spectroscopic detail through selective enhancements. While typical hyperpolarization approaches have utilized microwave irradiation, one emerging route is the use of optically generated triplet states. We report an investigation into the effects of solution viscosity on radical-triplet pair interactions, propose a new standard for quantification of the hyperpolarization in EPR experiments, and demonstrate a significant increase in the optically generated 1H NMR signal enhancement upon addition of glycerol to aqueous solutions.
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Affiliation(s)
- Matthew W Dale
- Department of Physics, University of Warwick, Gibbet Hill Road, Coventry, CV4 7AL, UK
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5
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Marsh D. Molecular order and T 1-relaxation, cross-relaxation in nitroxide spin labels. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 2018; 290:38-45. [PMID: 29550514 DOI: 10.1016/j.jmr.2018.02.020] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/10/2018] [Revised: 02/26/2018] [Accepted: 02/27/2018] [Indexed: 06/08/2023]
Abstract
Interpretation of saturation-recovery EPR experiments on nitroxide spin labels whose angular rotation is restricted by the orienting potential of the environment (e.g., membranes) currently concentrates on the influence of rotational rates and not of molecular order. Here, I consider the dependence on molecular ordering of contributions to the rates of electron spin-lattice relaxation and cross relaxation from modulation of N-hyperfine and Zeeman anisotropies. These are determined by the averages 〈cos2θ〉 and 〈cos4θ〉, where θ is the angle between the nitroxide z-axis and the static magnetic field, which in turn depends on the angles that these two directions make with the director of uniaxial ordering. For saturation-recovery EPR at 9 GHz, the recovery rate constant is predicted to decrease with increasing order for the magnetic field oriented parallel to the director, and to increase slightly for the perpendicular field orientation. The latter situation corresponds to the usual experimental protocol and is consistent with the dependence on chain-labelling position in lipid bilayer membranes. An altered dependence on order parameter is predicted for saturation-recovery EPR at high field (94 GHz) that is not entirely consistent with observation. Comparisons with experiment are complicated by contributions from slow-motional components, and an unexplained background recovery rate that most probably is independent of order parameter. In general, this analysis supports the interpretation that recovery rates are determined principally by rotational diffusion rates, but experiments at other spectral positions/field orientations could increase the sensitivity to order parameter.
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Affiliation(s)
- Derek Marsh
- Max-Planck-Institut für biophysikalische Chemie, 37070 Göttingen, Germany.
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6
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Biller JR, Barnes R, Han S. Perspective of Overhauser dynamic nuclear polarization for the study of soft materials. Curr Opin Colloid Interface Sci 2018. [DOI: 10.1016/j.cocis.2018.02.007] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
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7
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Atzori M, Morra E, Tesi L, Albino A, Chiesa M, Sorace L, Sessoli R. Quantum Coherence Times Enhancement in Vanadium(IV)-based Potential Molecular Qubits: the Key Role of the Vanadyl Moiety. J Am Chem Soc 2016; 138:11234-44. [PMID: 27517709 DOI: 10.1021/jacs.6b05574] [Citation(s) in RCA: 143] [Impact Index Per Article: 15.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
In the search for long-lived quantum coherence in spin systems, vanadium(IV) complexes have shown record phase memory times among molecular systems. When nuclear spin-free ligands are employed, vanadium(IV) complexes can show at low temperature sufficiently long quantum coherence times, Tm, to perform quantum operations, but their use in real devices operating at room temperature is still hampered by the rapid decrease of T1 caused by the efficient spin-phonon coupling. In this work we have investigated the effect of different coordination environments on the magnetization dynamics and the quantum coherence of two vanadium(IV)-based potential molecular spin qubits in the solid state by introducing a unique structural difference, i.e., an oxovanadium(IV) in a square pyramidal versus a vanadium(IV) in an octahedral environment featuring the same coordinating ligand, namely, the 1,3-dithiole-2-thione-4,5-dithiolate. This investigation, performed by a combined approach of alternate current (ac) susceptibility measurements and continuous wave (CW) and pulsed electron paramagnetic resonance (EPR) spectroscopies revealed that the effectiveness of the vanadyl moiety in enhancing quantum coherence up to room temperature is related to a less effective mechanism of spin-lattice relaxation that can be quantitatively evaluated by the exponent n (ca. 3) of the temperature dependence of the relaxation rate. A more rapid collapse is observed for the non-oxo counterpart (n = 4) hampering the observation of quantum coherence at room temperature. Record coherence time at room temperature (1.04 μs) and Rabi oscillations are also observed for the vanadyl derivative in a very high concentrated material (5 ± 1%) as a result of the additional benefit provided by the use of a nuclear spin-free ligand.
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Affiliation(s)
- Matteo Atzori
- Dipartimento di Chimica "Ugo Schiff" e INSTM, Università degli Studi di Firenze , Via della Lastruccia 3, I50019 Sesto Fiorentino (Firenze), Italy
| | - Elena Morra
- Dipartimento di Chimica e NIS Centre, Università di Torino , Via P. Giuria 7, I10125 Torino, Italy
| | - Lorenzo Tesi
- Dipartimento di Chimica "Ugo Schiff" e INSTM, Università degli Studi di Firenze , Via della Lastruccia 3, I50019 Sesto Fiorentino (Firenze), Italy
| | - Andrea Albino
- Dipartimento di Chimica "Ugo Schiff" e INSTM, Università degli Studi di Firenze , Via della Lastruccia 3, I50019 Sesto Fiorentino (Firenze), Italy
| | - Mario Chiesa
- Dipartimento di Chimica e NIS Centre, Università di Torino , Via P. Giuria 7, I10125 Torino, Italy
| | - Lorenzo Sorace
- Dipartimento di Chimica "Ugo Schiff" e INSTM, Università degli Studi di Firenze , Via della Lastruccia 3, I50019 Sesto Fiorentino (Firenze), Italy
| | - Roberta Sessoli
- Dipartimento di Chimica "Ugo Schiff" e INSTM, Università degli Studi di Firenze , Via della Lastruccia 3, I50019 Sesto Fiorentino (Firenze), Italy
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8
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Goslar J, Hoffmann SK, Lijewski S. Dynamics of 4-oxo-TEMPO-d16-(15)N nitroxide-propylene glycol system studied by ESR and ESE in liquid and glassy state in temperature range 10-295K. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 2016; 269:162-175. [PMID: 27323281 DOI: 10.1016/j.jmr.2016.06.006] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/30/2016] [Revised: 06/07/2016] [Accepted: 06/08/2016] [Indexed: 06/06/2023]
Abstract
ESR spectra and electron spin relaxation of nitroxide radical in 4-oxo-TEMPO-d16-(15)N in propylene glycol were studied at X-band in the temperature range 10-295K. The spin-lattice relaxation in the liquid viscous state determined from the resonance line shape is governed by three mechanisms occurring during isotropic molecular reorientations. In the glassy state below 200K the spin-lattice relaxation, phase relaxation and electron spin echo envelope modulations (ESEEM) were studied by pulse spin echo technique using 2-pulse and 3-pulse induced signals. Electron spin-lattice relaxation is governed by a single non-phonon relaxation process produced by localized oscillators of energy 76cm(-1). Electron spin dephasing is dominated by a molecular motion producing a resonance-type peak in the temperature dependence of the dephasing rate around 120K. The origin of the peak is discussed and a simple method for the peak shape analysis is proposed, which gives the activation energy of a thermally activated motion Ea=7.8kJ/mol and correlation time τ0=10(-8)s. The spin echo amplitude is strongly modulated and FT spectrum contains a doublet of lines centered around the (2)D nuclei Zeeman frequency. The splitting into the doublet is discussed as due to a weak hyperfine coupling of nitroxide unpaired electron with deuterium of reorienting CD3 groups.
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Affiliation(s)
- Janina Goslar
- Institute of Molecular Physics, Polish Academy of Sciences, Smoluchowskiego 17, 60-179 Poznan, Poland
| | - Stanislaw K Hoffmann
- Institute of Molecular Physics, Polish Academy of Sciences, Smoluchowskiego 17, 60-179 Poznan, Poland.
| | - Stefan Lijewski
- Institute of Molecular Physics, Polish Academy of Sciences, Smoluchowskiego 17, 60-179 Poznan, Poland
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9
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Effect of Very High Charge Density and Monomer Constitution on the Synthesis and Properties of Cationic Polyelectrolytes. Polymers (Basel) 2016; 8:polym8060234. [PMID: 30979329 PMCID: PMC6432479 DOI: 10.3390/polym8060234] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/08/2016] [Revised: 05/16/2016] [Accepted: 05/30/2016] [Indexed: 11/16/2022] Open
Abstract
The free-radical homopolymerization of 1,3-bis(N,N,N-trimethylammonium)-2-propylmethacrylate dichloride (di-M) and 1,3-bis(N,N,N-trimethylammonium)-2-propylacrylate dichloride (di-A) in aqueous solution yields cationic polyelectrolytes (PEL) with theoretical/structural charge spacing of only ≈0.12 nm. The high charge density causes condensation of ≈82% of the chloride counterions. The high level of counterion condensation reduces the ionic strength in the polymerizing batch when the monomer molecules connect to PEL chains. This has the consequence that the hydrodynamic and excluded volume of the PEL molecules will change. Studies of the free radical polymerization revealed non-ideal polymerization kinetics already at low conversion and additionally autoacceleration above a certain monomer concentration and conversion. Similar autoacceleration was not observed for monomers yielding PEL with charge spacing of 0.25 or 0.5 nm. Coulomb interactions, monomer association, steric effects, and specific features of the monomer constitution have been evaluated concerning their contributions to the concentration dependence and conversion dependence of kinetic parameters. The different backbone constitutions of di-M and di-A not only influence the polymerization kinetics but also equip poly(di-M) with higher hydrolytic stability. The experimental results confirm the impact of electrochemical parameters and the necessity to reconsider their inclusion in kinetic models.
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10
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Eaton SS, Eaton GR. Multifrequency Pulsed EPR and the Characterization of Molecular Dynamics. Methods Enzymol 2015; 563:37-58. [PMID: 26478481 PMCID: PMC5380387 DOI: 10.1016/bs.mie.2015.06.028] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/08/2023]
Abstract
In fluid solution, motion-dependent processes dominate electron spin-lattice relaxation for nitroxides and semiquinones at frequencies between 250 MHz and 34 GHz. For triarylmethyl radicals, motion-dependent processes dominate spin-lattice relaxation at frequencies below about 3 GHz. The frequency dependence of relaxation provides invaluable information about dynamic processes occurring with characteristic times on the order of the electron Zeeman frequency. Relaxation mechanisms, methods of measuring spin-lattice relaxation, and motional processes for nitroxide, semiquinone, and triarylmethyl radicals are discussed.
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Affiliation(s)
- Sandra S Eaton
- Department of Chemistry and Biochemistry, University of Denver, Denver, Colorado, USA.
| | - Gareth R Eaton
- Department of Chemistry and Biochemistry, University of Denver, Denver, Colorado, USA
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11
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Kundu K, Kattnig DR, Mladenova BY, Grampp G, Das R. Electron Spin–Lattice Relaxation Mechanisms of Nitroxyl Radicals in Ionic Liquids and Conventional Organic Liquids: Temperature Dependence of a Thermally Activated Process. J Phys Chem B 2015; 119:4501-11. [DOI: 10.1021/acs.jpcb.5b00431] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Krishnendu Kundu
- Tata Institute of Fundamental Research, Homi Bhabha Road, Mumbai 400005, India
| | - Daniel R. Kattnig
- Physical
and Theoretical Chemistry Laboratory, University of Oxford, South Parks
Road, Oxford, OX1 3QZ, United Kingdom
| | - Boryana Y. Mladenova
- Institute
of Physical and Theoretical Chemistry, Graz University of Technology, Stremayrgasse 9/Z2, A-8010 Graz, Austria
| | - Günter Grampp
- Institute
of Physical and Theoretical Chemistry, Graz University of Technology, Stremayrgasse 9/Z2, A-8010 Graz, Austria
| | - Ranjan Das
- Tata Institute of Fundamental Research, Homi Bhabha Road, Mumbai 400005, India
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12
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Merunka D, Peric M, Peric M. Study of nanostructural organization of ionic liquids by electron paramagnetic resonance spectroscopy. J Phys Chem B 2015; 119:3185-93. [PMID: 25594422 PMCID: PMC4871252 DOI: 10.1021/jp512487y] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
Abstract
The X-band electron paramagnetic resonance spectroscopy (EPR) of a stable, spherical nitroxide spin probe, perdeuterated 2,2,6,6-tetramethyl-4-oxopiperidine-1-oxyl (pDTO) has been used to study the nanostructural organization of a series of 1-alkyl-3-methylimidazolium tetrafluoroborate ionic liquids (ILs) with alkyl chain lengths from two to eight carbons. By employing nonlinear least-squares fitting of the EPR spectra, we have obtained values of the rotational correlation time and hyperfine coupling splitting of pDTO to high precision. The rotational correlation time of pDTO in ILs and squalane, a viscous alkane, can be fit very well to a power law functionality with a singular temperature, which often describes a number of physical quantities measured in supercooled liquids. The viscosity of the ILs and squalane, taken from the literature, can also be fit to the same power law expression, which means that the rotational correlation times and the ionic liquid viscosities have similar functional dependence on temperature. The apparent activation energy of both the rotational correlation time of pDTO and the viscous flow of ILs and squalane increases with decreasing temperature; in other words, they exhibit strong non-Arrhenius behavior. The rotational correlation time of pDTO as a function of η/T, where η is the shear viscosity and T is the temperature, is well described by the Stokes-Einstein-Debye (SED) law, while the hydrodynamic probe radii are solvent dependent and are smaller than the geometric radius of the probe. The temperature dependence of hyperfine coupling splitting is the same in all four ionic liquids. The value of the hyperfine coupling splitting starts decreasing with increasing alkyl chain length in the ionic liquids in which the number of carbons in the alkyl chain is greater than four. This decrease together with the decrease in the hydrodynamic radius of the probe indicates a possible existence of nonpolar nanodomains.
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Affiliation(s)
| | - Mirna Peric
- Department of Physics and Astronomy and The Center for Supramolecular Studies California State University at Northridge, Northridge, CA 91330
| | - Miroslav Peric
- Department of Physics and Astronomy and The Center for Supramolecular Studies California State University at Northridge, Northridge, CA 91330
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13
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Yang Z, Bridges M, Lerch MT, Altenbach C, Hubbell WL. Saturation Recovery EPR and Nitroxide Spin Labeling for Exploring Structure and Dynamics in Proteins. Methods Enzymol 2015; 564:3-27. [DOI: 10.1016/bs.mie.2015.07.016] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
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14
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Yang Z, Jiménez-Osés G, López CJ, Bridges MD, Houk KN, Hubbell WL. Long-range distance measurements in proteins at physiological temperatures using saturation recovery EPR spectroscopy. J Am Chem Soc 2014; 136:15356-65. [PMID: 25290172 PMCID: PMC4227719 DOI: 10.1021/ja5083206] [Citation(s) in RCA: 35] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/13/2014] [Indexed: 11/28/2022]
Abstract
Site-directed spin labeling in combination with EPR is a powerful method for providing distances on the nm scale in biological systems. The most popular strategy, double electron-electron resonance (DEER), is carried out at cryogenic temperatures (50-80 K) to increase the short spin-spin relaxation time (T2) upon which the technique relies. A challenge is to measure long-range distances (20-60 Å) in proteins near physiological temperatures. Toward this goal we are investigating an alternative approach based on the distance-dependent enhancement of spin-lattice relaxation rate (T1(-1)) of a nitroxide spin label by a paramagnetic metal. With a commonly used nitroxide side chain (R1) and Cu(2+), it has been found that interspin distances ≤25 Å can be determined in this way (Jun et al. Biochemistry 2006, 45, 11666). Here, the upper limit of the accessible distance is extended to ≈40 Å using spin labels with long T1, a high-affinity 5-residue Cu(2+) binding loop inserted into the protein sequence, and pulsed saturation recovery to measure relaxation enhancement. Time-domain Cu(2+) electron paramagnetic resonance, quantum mechanical calculations, and molecular dynamics simulations provide information on the structure and geometry of the Cu(2+) loop and indicate that the metal ion is well-localized in the protein. An important aspect of these studies is that both Cu(2+)/nitroxide DEER at cryogenic temperatures and T1 relaxation measurements at room temperature can be carried out on the same sample, allowing both validation of the relaxation method and assessment of the effect of freezing on protein structure.
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Affiliation(s)
- Zhongyu Yang
- Jules Stein Eye Institute and Department of
Chemistry and Biochemistry, University of
California, Los Angeles, California 90095, United States
| | - Gonzalo Jiménez-Osés
- Jules Stein Eye Institute and Department of
Chemistry and Biochemistry, University of
California, Los Angeles, California 90095, United States
| | - Carlos J. López
- Jules Stein Eye Institute and Department of
Chemistry and Biochemistry, University of
California, Los Angeles, California 90095, United States
| | | | - K. N. Houk
- Jules Stein Eye Institute and Department of
Chemistry and Biochemistry, University of
California, Los Angeles, California 90095, United States
| | - Wayne L. Hubbell
- Jules Stein Eye Institute and Department of
Chemistry and Biochemistry, University of
California, Los Angeles, California 90095, United States
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15
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Yu Z, Quine RW, Rinard GA, Tseitlin M, Elajaili H, Kathirvelu V, Clouston LJ, Boratyński PJ, Rajca A, Stein R, Mchaourab H, Eaton SS, Eaton GR. Rapid-scan EPR of immobilized nitroxides. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 2014; 247:67-71. [PMID: 25240151 PMCID: PMC4247172 DOI: 10.1016/j.jmr.2014.08.008] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/12/2014] [Revised: 08/13/2014] [Accepted: 08/14/2014] [Indexed: 05/05/2023]
Abstract
X-band electron paramagnetic resonance spectra of immobilized nitroxides were obtained by rapid scan at 293 K. Scan widths were 155 G with 13.4 kHz scan frequency for (14)N-perdeuterated tempone and for T4 lysozyme doubly spin labeled with an iodoacetamide spirocyclohexyl nitroxide and 100 G with 20.9 kHz scan frequency for (15)N-perdeuterated tempone. These wide scans were made possible by modifications to our rapid-scan driver, scan coils made of Litz wire, and the placement of highly conducting aluminum plates on the poles of a Bruker 10″ magnet to reduce resistive losses in the magnet pole faces. For the same data acquisition time, the signal-to-noise for the rapid-scan absorption spectra was about an order of magnitude higher than for continuous wave first-derivative spectra recorded with modulation amplitudes that do not broaden the lineshapes.
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Affiliation(s)
- Zhelin Yu
- Department of Chemistry and Biochemistry, University of Denver, Denver, CO 80208, USA
| | - Richard W Quine
- School of Engineering and Computer Science, University of Denver, Denver, CO 80208, USA
| | - George A Rinard
- School of Engineering and Computer Science, University of Denver, Denver, CO 80208, USA
| | - Mark Tseitlin
- Department of Chemistry and Biochemistry, University of Denver, Denver, CO 80208, USA
| | - Hanan Elajaili
- Department of Chemistry and Biochemistry, University of Denver, Denver, CO 80208, USA
| | - Velavan Kathirvelu
- Department of Chemistry and Biochemistry, University of Denver, Denver, CO 80208, USA
| | - Laura J Clouston
- Department of Chemistry, University of Nebraska, Lincoln, NE 68588-0304, USA
| | | | - Andrzej Rajca
- Department of Chemistry, University of Nebraska, Lincoln, NE 68588-0304, USA
| | - Richard Stein
- Department of Molecular Physiology and Biophysics, Vanderbilt University Medical Center, Nashville, TN 37232, USA
| | - Hassane Mchaourab
- Department of Molecular Physiology and Biophysics, Vanderbilt University Medical Center, Nashville, TN 37232, USA
| | - Sandra S Eaton
- Department of Chemistry and Biochemistry, University of Denver, Denver, CO 80208, USA
| | - Gareth R Eaton
- Department of Chemistry and Biochemistry, University of Denver, Denver, CO 80208, USA.
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16
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Kruk D, Hoffmann SK, Goslar J, Lijewski S, Kubica-Misztal A, Korpała A, Oglodek I, Kowalewski J, Rössler EA, Moscicki J. ESR lineshape and 1H spin-lattice relaxation dispersion in propylene glycol solutions of nitroxide radicals--joint analysis. J Chem Phys 2013; 139:244502. [PMID: 24387377 DOI: 10.1063/1.4850635] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Electron Spin Resonance (ESR) spectroscopy and Nuclear Magnetic Relaxation Dispersion (NMRD) experiments are reported for propylene glycol solutions of the nitroxide radical: 4-oxo-TEMPO-d16 containing (15)N and (14)N isotopes. The NMRD experiments refer to (1)H spin-lattice relaxation measurements in a broad frequency range (10 kHz-20 MHz). A joint analysis of the ESR and NMRD data is performed. The ESR lineshapes give access to the nitrogen hyperfine tensor components and the rotational correlation time of the paramagnetic molecule. The NMRD data are interpreted in terms of the theory of paramagnetic relaxation enhancement in solutions of nitroxide radicals, recently presented by Kruk et al. [J. Chem. Phys. 138, 124506 (2013)]. The theory includes the effect of the electron spin relaxation on the (1)H relaxation of the solvent. The (1)H relaxation is caused by dipole-dipole interactions between the electron spin of the radical and the proton spins of the solvent molecules. These interactions are modulated by three dynamic processes: relative translational dynamics of the involved molecules, molecular rotation, and electron spin relaxation. The sensitivity to rotation originates from the non-central positions of the interacting spin in the molecules. The electronic relaxation is assumed to stem from the electron spin-nitrogen spin hyperfine coupling, modulated by rotation of the radical molecule. For the interpretation of the NMRD data, we use the nitrogen hyperfine coupling tensor obtained from ESR and fit the other relevant parameters. The consistency of the unified analysis of ESR and NMRD, evaluated by the agreement between the rotational correlation times obtained from ESR and NMRD, respectively, and the agreement of the translation diffusion coefficients with literature values obtained for pure propylene glycol, is demonstrated to be satisfactory.
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Affiliation(s)
- D Kruk
- University of Warmia & Mazury in Olsztyn, Faculty of Mathematics & Computer Science, Sloneczna 54, PL-10710 Olsztyn, Poland
| | - S K Hoffmann
- Institute of Molecular Physics, Polish Academy of Sciences, Smoluchowskiego 17, 60-179 Poznan, Poland
| | - J Goslar
- Institute of Molecular Physics, Polish Academy of Sciences, Smoluchowskiego 17, 60-179 Poznan, Poland
| | - S Lijewski
- Institute of Molecular Physics, Polish Academy of Sciences, Smoluchowskiego 17, 60-179 Poznan, Poland
| | - A Kubica-Misztal
- Institute of Physics, Jagiellonian University, Reymonta 4, 30-059 Krakow, Poland
| | - A Korpała
- Institute of Physics, Jagiellonian University, Reymonta 4, 30-059 Krakow, Poland
| | - I Oglodek
- Institute of Physics, Jagiellonian University, Reymonta 4, 30-059 Krakow, Poland
| | - J Kowalewski
- Arrhenius Laboratory, Department of Materials and Environmental Chemistry, Stockholm University, S-106 91 Stockholm, Sweden
| | - E A Rössler
- Universität Bayreuth, Experimentalphysik II, 95440 Bayreuth, Germany
| | - J Moscicki
- Institute of Physics, Jagiellonian University, Reymonta 4, 30-059 Krakow, Poland
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Biller JR, Elajaili H, Meyer V, Rosen GM, Eaton SS, Eaton GR. Electron spin-lattice relaxation mechanisms of rapidly-tumbling nitroxide radicals. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 2013; 236:47-56. [PMID: 24056272 PMCID: PMC3952064 DOI: 10.1016/j.jmr.2013.08.006] [Citation(s) in RCA: 35] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/22/2012] [Revised: 08/13/2013] [Accepted: 08/14/2013] [Indexed: 05/12/2023]
Abstract
Electron spin relaxation times at 295 K were measured at frequencies between 250 MHz and 34 GHz for perdeuterated 2,2,6,6-tetramethyl-4-piperidone-1-oxyl (PDT) in five solvents with viscosities that result in tumbling correlation times, τR, between 4 and 50 ps and for three (14)N/(15)N pairs of nitroxides in water with τR between 9 and 19 ps. To test the impact of structure on relaxation three additional nitroxides with τR between 10 and 26 ps were studied. In this fast tumbling regime T2(-1)~T1(-1) at frequencies up to about 9 GHz. At 34 GHz T2(-1)>T1(-1) due to increased contributions to T2(-1) from incomplete motional averaging of g-anisotropy, and T2(-1)-T1(-1) is proportional to τR. The contribution to T1(-1) from spin rotation is independent of frequency and decreases as τR increases. Spin rotation dominates T1(-1) at 34 GHz for all τR studied, and at all frequencies studied for τR=4 ps. The contribution to T1(-1) from modulation of nitrogen hyperfine anisotropy increases as frequency decreases and as τR increases; it dominates at low frequencies for τR>~15 ps. The contribution from modulation of g anisotropy is significant only at 34 GHz. Inclusion of a thermally-activated process was required to account for the observation that for most of the radicals, T1(-1) was smaller at 250 MHz than at 1-2 GHz. The significant (15)N/(14)N isotope effect, the small H/D isotope effect, and the viscosity dependence of the magnitude of the contribution from the thermally-activated process suggest that it arises from intramolecular motions of the nitroxide ring that modulate the isotropic A values.
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Affiliation(s)
- Joshua R. Biller
- Department of Chemistry and Biochemistry and Center for EPR Imaging In Vivo Physiology, University of Denver, Denver, CO 80208
| | - Hanan Elajaili
- Department of Chemistry and Biochemistry and Center for EPR Imaging In Vivo Physiology, University of Denver, Denver, CO 80208
| | - Virginia Meyer
- Department of Chemistry and Biochemistry and Center for EPR Imaging In Vivo Physiology, University of Denver, Denver, CO 80208
| | - Gerald M. Rosen
- Department of Pharmaceutical Sciences, Center for EPR Imaging in Vivo Physiology, and Center for Biomedical Engineering and Technology, University of Maryland, Baltimore, MD 21201
| | - Sandra S. Eaton
- Department of Chemistry and Biochemistry and Center for EPR Imaging In Vivo Physiology, University of Denver, Denver, CO 80208
| | - Gareth R. Eaton
- Department of Chemistry and Biochemistry and Center for EPR Imaging In Vivo Physiology, University of Denver, Denver, CO 80208
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18
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Kruk D, Korpała A, Kubica A, Kowalewski J, Rössler EA, Moscicki J. 1H relaxation dispersion in solutions of nitroxide radicals: Influence of electron spin relaxation. J Chem Phys 2013; 138:124506. [DOI: 10.1063/1.4795006] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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19
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Biller JR, Meyer VM, Elajaili H, Rosen GM, Eaton SS, Eaton GR. Frequency dependence of electron spin relaxation times in aqueous solution for a nitronyl nitroxide radical and perdeuterated-tempone between 250 MHz and 34 GHz. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 2012; 225:52-7. [PMID: 23123770 PMCID: PMC3538045 DOI: 10.1016/j.jmr.2012.10.002] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/23/2012] [Revised: 10/04/2012] [Accepted: 10/07/2012] [Indexed: 05/16/2023]
Abstract
Electron spin relaxation times of perdeuterated tempone (PDT) 1 and of a nitronyl nitroxide (2-(4-carboxy-phenyl)-4,4,5,5-tetramethylimidazoline-3-oxide-1-oxyl) 2 in aqueous solution at room temperature were measured by 2-pulse electron spin echo (T(2)) or 3-pulse inversion recovery (T(1)) in the frequency range of 250 MHz to 34 GHz. At 9 GHz values of T(1) measured by long-pulse saturation recovery were in good agreement with values determined by inversion recovery. Below 9 GHz for 1 and below 1.5 GHz for 2,T(1)~T(2), as expected in the fast tumbling regime. At higher frequencies T(2) was shorter than T(1) due to incomplete motional averaging of g and A anisotropy. The frequency dependence of 1/T(1) is modeled as the sum of spin rotation, modulation of g and A-anisotropy, and a thermally-activated process that has maximum contribution at about 1.5 GHz. The spin lattice relaxation times for the nitronyl nitroxide were longer than for PDT by a factor of about 2 at 34 GHz, decreasing to about a factor of 1.5 at 250 MHz. The rotational correlation times, τ(R) are calculated to be 9 ps for 1 and about 25 ps for 2. The longer spin lattice relaxation times for 2 than for 1 at 9 and 34 GHz are due predominantly to smaller contributions from spin rotation that arise from slower tumbling. The smaller nitrogen hyperfine couplings for the nitronyl 2 than for 1 decrease the contribution to relaxation due to modulation of A anisotropy. However, at lower frequencies the slower tumbling of 2 results in a larger value of ωτ(R) (ω is the resonance frequency) and larger values of the spectral density function, which enhances the contribution from modulation of anisotropic interactions for 2 to a greater extent than for 1.
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Affiliation(s)
- Joshua R. Biller
- Department of Chemistry and Biochemistry, University of Denver, Denver, CO 80208
- Center for EPR Imaging in Vivo Physiology, University of Denver, Denver, CO 80208 and University of Maryland, Baltimore, Baltimore, MD, 21201
| | - Virginia M. Meyer
- Department of Chemistry and Biochemistry, University of Denver, Denver, CO 80208
- Center for EPR Imaging in Vivo Physiology, University of Denver, Denver, CO 80208 and University of Maryland, Baltimore, Baltimore, MD, 21201
| | - Hanan Elajaili
- Department of Chemistry and Biochemistry, University of Denver, Denver, CO 80208
- Center for EPR Imaging in Vivo Physiology, University of Denver, Denver, CO 80208 and University of Maryland, Baltimore, Baltimore, MD, 21201
| | - Gerald M. Rosen
- Center for EPR Imaging in Vivo Physiology, University of Denver, Denver, CO 80208 and University of Maryland, Baltimore, Baltimore, MD, 21201
- Center for Biomedical Engineering and Technology, University of Maryland, Baltimore, Baltimore, MD, 21201
- Department of Pharmaceutical Sciences, University of Maryland, Baltimore, Baltimore, MD, 21201
| | - Sandra S. Eaton
- Department of Chemistry and Biochemistry, University of Denver, Denver, CO 80208
- Center for EPR Imaging in Vivo Physiology, University of Denver, Denver, CO 80208 and University of Maryland, Baltimore, Baltimore, MD, 21201
| | - Gareth R. Eaton
- Department of Chemistry and Biochemistry, University of Denver, Denver, CO 80208
- Center for EPR Imaging in Vivo Physiology, University of Denver, Denver, CO 80208 and University of Maryland, Baltimore, Baltimore, MD, 21201
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Kruk D, Korpala A, Rössler E, Earle KA, Medycki W, Moscicki J. 1H NMR relaxation in glycerol solutions of nitroxide radicals: effects of translational and rotational dynamics. J Chem Phys 2012; 136:114504. [PMID: 22443774 DOI: 10.1063/1.3692603] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
(1)H spin-lattice relaxation rates in glycerol solutions of selected nitroxide radicals at temperatures between 200 K and 400 K were measured at 15 MHz and 25 MHz. The frequency and temperature conditions were chosen in such a way that the relaxation rates go through their maximum values and are affected by neither the electron spin relaxation nor the electron-nitrogen nucleus hyperfine coupling, so that the focus could be put on the mechanisms of motion. By comparison with (1)H spin-lattice relaxation results for pure glycerol, it has been demonstrated that the inter-molecular electron spin-proton spin dipole-dipole interactions are affected not only by relative translational motion of the solvent and solute molecules, but also by their rotational dynamics as the interacting spins are displaced from the molecular centers; the eccentricity effects are usually not taken into account. The (1)H relaxation data have been decomposed into translational and rotational contributions and their relative importance as a function of frequency and temperature discussed in detail. It has been demonstrated that neglecting the rotational effects on the inter-molecular interactions leads to non-realistic conclusions regarding the translational dynamics of the paramagnetic molecules.
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Affiliation(s)
- D Kruk
- Faculty of Mathematics and Computer Science, University of Warmia and Mazury in Olsztyn, Sloneczna 54, PL-10710 Olsztyn, Poland.
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21
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Collauto A, Barbon A, Brustolon M. First determination of the spin relaxation properties of a nitronyl nitroxide in solution by electron spin echoes at X-band: a comparison with Tempone. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 2012; 223:180-186. [PMID: 22975247 DOI: 10.1016/j.jmr.2012.07.011] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/15/2012] [Revised: 07/12/2012] [Accepted: 07/13/2012] [Indexed: 06/01/2023]
Abstract
We studied by electron spin echo pulse methods the spin relaxation properties of a phenyl nitronyl nitroxide radical (2-phenyl-4,4,5,5-tetramethylimidazoline-1-oxyl 3-oxide, PTIO) at X-band in fluid toluene solution in a wide temperature range, and in a water/glycerol 1:1 mixture near room temperature. The relaxation properties of PTIO have been compared with that of Tempone, as a widely used nitroxide. By a new procedure, based on experimental results on the temperature dependences of the relaxation times T(1) and T(2), and on the approximation of an isotropic brownian rotational diffusion, we separated non-secular, spin rotational and residual terms from the transverse relaxation rate to isolate secular and pseudosecular contributions. By comparing the results for the two radicals we found the differences in the magnetic properties that give rise to slower transverse (T(2)) and longitudinal (T(1)) electron spin relaxation for PTIO in the whole temperature range explored in this work.
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Affiliation(s)
- A Collauto
- Dipartimento di Scienze Chimiche, Università degli Studi di Padova, Via Marzolo 1, I-35131 Padova, Italy
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22
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Kruk D, Korpała A, Kowalewski J, Rössler EA, Moscicki J. 1H relaxation dispersion in solutions of nitroxide radicals: Effects of hyperfine interactions with 14N and 15N nuclei. J Chem Phys 2012; 137:044512. [DOI: 10.1063/1.4736854] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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23
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Biller JR, Meyer V, Elajaili H, Rosen GM, Kao JP, Eaton SS, Eatona GR. Relaxation times and line widths of isotopically-substituted nitroxides in aqueous solution at X-band. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 2011; 212:370-7. [PMID: 21843961 PMCID: PMC3196672 DOI: 10.1016/j.jmr.2011.07.018] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/06/2011] [Revised: 07/21/2011] [Accepted: 07/22/2011] [Indexed: 05/16/2023]
Abstract
Optimization of nitroxides as probes for EPR imaging requires detailed understanding of spectral properties. Spin lattice relaxation times, spin packet line widths, nuclear hyperfine splitting, and overall lineshapes were characterized for six low molecular weight nitroxides in dilute deoxygenated aqueous solution at X-band. The nitroxides included 6-member, unsaturated 5-member, or saturated 5-member rings, most of which were isotopically labeled. The spectra are near the fast tumbling limit with T(1)∼T(2) in the range of 0.50-1.1 μs at ambient temperature. Both spin-lattice relaxation T(1) and spin-spin relaxation T(2) are longer for (15)N- than for (14)N-nitroxides. The dominant contributions to T(1) are modulation of nitrogen hyperfine anisotropy and spin rotation. Dependence of T(1) on nitrogen nuclear spin state m(I) was observed for both (14)N and (15)N. Unresolved hydrogen/deuterium hyperfine couplings dominate overall line widths. Lineshapes were simulated by including all nuclear hyperfine couplings and spin packet line widths that agreed with values obtained by electron spin echo. Line widths and relaxation times are predicted to be about the same at 250 MHz as at X-band.
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Affiliation(s)
- Joshua R. Biller
- Department of Chemistry and Biochemistry, University of Denver, Denver, CO 80208
- Center for EPR Imaging in Vivo Physiology, University of Denver, Denver, CO 80208 and University of Maryland, Baltimore, Baltimore, MD, 21201
| | - Virginia Meyer
- Department of Chemistry and Biochemistry, University of Denver, Denver, CO 80208
- Center for EPR Imaging in Vivo Physiology, University of Denver, Denver, CO 80208 and University of Maryland, Baltimore, Baltimore, MD, 21201
| | - Hanan Elajaili
- Department of Chemistry and Biochemistry, University of Denver, Denver, CO 80208
- Center for EPR Imaging in Vivo Physiology, University of Denver, Denver, CO 80208 and University of Maryland, Baltimore, Baltimore, MD, 21201
| | - Gerald M. Rosen
- Center for EPR Imaging in Vivo Physiology, University of Denver, Denver, CO 80208 and University of Maryland, Baltimore, Baltimore, MD, 21201
- Center for Biomedical Engineering and Technology, University of Maryland, Baltimore, Baltimore, MD, 21201
- Department of Pharmaceutical Sciences, University of Maryland, Baltimore, Baltimore, MD, 21201
| | - Joseph P.Y. Kao
- Center for EPR Imaging in Vivo Physiology, University of Denver, Denver, CO 80208 and University of Maryland, Baltimore, Baltimore, MD, 21201
- Center for Biomedical Engineering and Technology, University of Maryland, Baltimore, Baltimore, MD, 21201
- Department of Physiology, University of Maryland, Baltimore, Baltimore, MD, 21201
| | - Sandra S. Eaton
- Department of Chemistry and Biochemistry, University of Denver, Denver, CO 80208
- Center for EPR Imaging in Vivo Physiology, University of Denver, Denver, CO 80208 and University of Maryland, Baltimore, Baltimore, MD, 21201
| | - Gareth R. Eatona
- Department of Chemistry and Biochemistry, University of Denver, Denver, CO 80208
- Center for EPR Imaging in Vivo Physiology, University of Denver, Denver, CO 80208 and University of Maryland, Baltimore, Baltimore, MD, 21201
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McKenzie I. Spin relaxation of a short-lived radical in zero magnetic field. Phys Chem Chem Phys 2011; 13:1168-73. [DOI: 10.1039/c0cp01216e] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Affiliation(s)
- Iain McKenzie
- ISIS Facility, STFC Rutherford Appleton Laboratory, Chilton Didcot, UK.
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Sato H, Kathirvelu V, Fielding A, Blinco JP, Micallef AS, Bottle SE, Eaton SS, Eaton GR. Impact of molecular size on electron spin relaxation rates of nitroxyl radicals in glassy solvents between 100 and 300 K. Mol Phys 2010. [DOI: 10.1080/00268970701724966] [Citation(s) in RCA: 33] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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26
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Bridges MD, Hideg K, Hubbell WL. Resolving Conformational and Rotameric Exchange in Spin-Labeled Proteins Using Saturation Recovery EPR. APPLIED MAGNETIC RESONANCE 2010; 37:363. [PMID: 20157634 PMCID: PMC2821067 DOI: 10.1007/s00723-009-0079-2] [Citation(s) in RCA: 52] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/19/2023]
Abstract
The function of many proteins involves equilibria between conformational substates, and to elucidate mechanisms of function it is essential to have experimental tools to detect the presence of conformational substates and to determine the time scale of exchange between them. Site-directed spin labeling (SDSL) has the potential to serve this purpose. In proteins containing a nitroxide side chain (R1), multicomponent electron paramagnetic resonance (EPR) spectra can arise either from equilibria involving different conformational substates or rotamers of R1. To employ SDSL to uniquely identify conformational equilibria, it is thus essential to distinguish between these origins of multicomponent spectra. Here we show that this is possible based on the time scale for exchange of the nitroxide between distinct environments that give rise to multicomponent EPR spectra; rotamer exchange for R1 lies in the ≈0.1-1 μs range, while conformational exchange is at least an order of magnitude slower. The time scales of exchange events are determined by saturation recovery EPR, and in favorable cases, the exchange rate constants between substates with lifetimes of approximately 1-70 μs can be estimated by the approach.
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Affiliation(s)
- Michael D. Bridges
- Jules Stein Eye Institute and Department of Chemistry and Biochemistry, University of California, Los Angeles, CA 90095-7008, USA
| | - Kálmán Hideg
- Institute of Organic and Medical Chemistry, University of Pécs, Szigeti str. 12, 7624 Pecs, Hungary
| | - Wayne L. Hubbell
- Jules Stein Eye Institute and Department of Chemistry and Biochemistry, University of California, Los Angeles, CA 90095-7008, USA
- Jules Stein Eye Institute, UCLA School of Medicine, Los Angeles, CA 90095-7008, USA
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Kathirvelu V, Sato H, Eaton SS, Eaton GR. Electron spin relaxation rates for semiquinones between 25 and 295K in glass-forming solvents. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 2009; 198:111-120. [PMID: 19223213 PMCID: PMC2757793 DOI: 10.1016/j.jmr.2009.01.026] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/16/2008] [Revised: 01/13/2009] [Accepted: 01/22/2009] [Indexed: 05/27/2023]
Abstract
Electron spin lattice relaxation rates for five semiquinones (2,5-di-t-butyl-1,4-benzosemiquinone, 2,5-di-t-amyl-1,4-benzosemiquinone, 2,5-di-phenyl-1,4-benzosemiquinone, 2,6-di-t-butyl-1,4-benzosemiquinone, tetrahydroxy-1,4-benzosemiquione) were studied by long-pulse saturation recovery EPR in 1:4 glycerol:ethanol, 1:1 glycerol:ethanol, and triethanolamine between 25 and 295K. Although the dominant process changes with temperature, relaxation rates vary smoothly with temperature, even near the glass transition temperatures, and could be modeled as the sum of contributions that have the temperature dependence that is predicted for the direct, Raman, local mode and tumbling-dependent processes. At 85K, which is in a temperature range where the Raman process dominates, relaxation rates along the g(xx) (g approximately 2.006) and g(yy) (g approximately 2.005) axes are about 2.7-1.5 times faster than along the g(zz) axis (g=2.0023). In highly viscous triethanolamine, contributions from tumbling-dependent processes are negligible. At temperatures above 100K relaxation rates in triethanolamine are unchanged between X-band (9.5GHz) and Q-band (34GHz), so the process that dominates in this temperature interval was assigned as a local mode rather than a thermally activated process. Because the largest proton hyperfine couplings are only 2.2G, spin rotation makes a larger contribution than tumbling-dependent modulation of hyperfine anisotropy. Since g anisotropy is small, tumbling-dependent modulation of g anisotropy makes a smaller contribution than spin rotation at X-band. Although there was negligible impact of methyl rotation on T(1), rotation of t-butyl or t-amyl methyl groups enhances spin echo dephasing between 85 and 150K.
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Affiliation(s)
| | | | - Sandra S. Eaton
- Corresponding author: Professor Sandra S. Eaton, Department of Chemistry and Biochemistry, University of Denver Denver, CO 80208, 303-871-3102, Fax: 303-871-2254,
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28
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Kathirvelu V, Eaton GR, Eaton SS. Impact of Chlorine Substitution on Spin Lattice Relaxation of Triarylmethyl and 1,4-Benzosemiquinone Radicals in Glass-forming Solvents between 25 and 295 K. APPLIED MAGNETIC RESONANCE 2009; 37:649. [PMID: 20126423 PMCID: PMC2814433 DOI: 10.1007/s00723-009-0086-3] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/19/2023]
Abstract
Spin-lattice relaxation rates measured by long-pulse saturation recovery in glassy solvents for chlorinated aromatic radicals: perchlorotriphenylmethyl radical, 2,5-dichloro-3,6-dihydroxy-1,4-benzosemiquinone, and tetrachloro-1,4-benzosemiquinone, were compared with relaxation rates for non-chlorinated analogs. The impact of the quadrupolar chlorines is small, and less than the effects of changing the rigidity of the glass. The temperature dependence of relaxation rates below the glass transition temperature could be modeled as the sum of contributions from the direct, Raman, and local mode processes.
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Affiliation(s)
- Velavan Kathirvelu
- Department of Chemistry and Biochemistry, University of Denver, Denver, CO 80208
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29
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Froncisz W, Camenisch TG, Ratke JJ, Anderson JR, Subczynski WK, Strangeway RA, Sidabras JW, Hyde JS. Saturation recovery EPR and ELDOR at W-band for spin labels. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 2008; 193:297-304. [PMID: 18547848 PMCID: PMC2561891 DOI: 10.1016/j.jmr.2008.05.008] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/07/2007] [Revised: 04/30/2008] [Accepted: 05/14/2008] [Indexed: 05/03/2023]
Abstract
A reference arm W-band (94 GHz) microwave bridge with two sample-irradiation arms for saturation recovery (SR) EPR and ELDOR experiments is described. Frequencies in each arm are derived from 2 GHz synthesizers that have a common time-base and are translated to 94 GHz in steps of 33 and 59 GHz. Intended applications are to nitroxide radical spin labels and spin probes in the liquid phase. An enabling technology is the use of a W-band loop-gap resonator (LGR) [J.W. Sidabras, R.R. Mett, W. Froncisz, T.G. Camenisch, J.R. Anderson, J.S. Hyde, Multipurpose EPR loop-gap resonator and cylindrical TE(011) cavity for aqueous samples at 94 GHz, Rev. Sci. Instrum. 78 (2007) 034701]. The high efficiency parameter (8.2 GW(-1/2) with sample) permits the saturating pump pulse level to be just 5 mW or less. Applications of SR EPR and ELDOR to the hydrophilic spin labels 3-carbamoyl-2,2,5,5-tetra-methyl-3-pyrroline-1-yloxyl (CTPO) and 2,2,6,6,-tetramethyl-4-piperidone-1-oxyl (TEMPONE) are described in detail. In the SR ELDOR experiment, nitrogen nuclear relaxation as well as Heisenberg exchange transfer saturation from pumped to observed hyperfine transitions. SR ELDOR was found to be an essential method for measurements of saturation transfer rates for small molecules such as TEMPONE. Free induction decay (FID) signals for small nitroxides at W-band are also reported. Results are compared with multifrequency measurements of T(1e) previously reported for these molecules in the range of 2-35 GHz [J.S. Hyde, J.-J. Yin, W.K. Subczynski, T.G. Camenisch, J.J. Ratke, W. Froncisz, Spin label EPR T(1) values using saturation recovery from 2 to 35 GHz. J. Phys. Chem. B 108 (2004) 9524-9529]. The values of T(1e) decrease at 94 GHz relative to values at 35 GHz.
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Affiliation(s)
- Wojciech Froncisz
- Department of Biophysics, Medical College of Wisconsin, Milwaukee, WI, USA
- Jagiellonian University, Krakow, Poland
| | | | - Joseph J. Ratke
- Department of Biophysics, Medical College of Wisconsin, Milwaukee, WI, USA
| | - James R. Anderson
- Department of Biophysics, Medical College of Wisconsin, Milwaukee, WI, USA
| | | | - Robert A. Strangeway
- Department of Biophysics, Medical College of Wisconsin, Milwaukee, WI, USA
- Milwaukee School of Engineering, Milwaukee, WI, USA
| | - Jason W. Sidabras
- Department of Biophysics, Medical College of Wisconsin, Milwaukee, WI, USA
| | - James S. Hyde
- Department of Biophysics, Medical College of Wisconsin, Milwaukee, WI, USA
- Author to whom correspondence should be addressed: James S. Hyde, Ph.D., Department of Biophysics, Medical College of Wisconsin, 8701 Watertown Plank Road, Milwaukee, WI 53226-0509, Phone: (414) 456-4005, Fax: (414) 456-6512, E-mail:
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Nakagawa K. Electron Spin–Lattice Relaxation Times of Spin Probes in Aqueous Dispersions of a Unique Amphiphilic Compound Obtained by a Saturation Recovery Method. BULLETIN OF THE CHEMICAL SOCIETY OF JAPAN 2008. [DOI: 10.1246/bcsj.81.843] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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Sato H, Kathirvelu V, Spagnol G, Rajca S, Rajca A, Eaton SS, Eaton GR. Impact of electron-electron spin interaction on electron spin relaxation of nitroxide diradicals and tetraradical in glassy solvents between 10 and 300 k. J Phys Chem B 2008; 112:2818-28. [PMID: 18284225 PMCID: PMC2731549 DOI: 10.1021/jp073600u] [Citation(s) in RCA: 65] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
To determine the impact of electron-electron spin-spin interactions on electron spin relaxation rates, 1/T1 and 1/Tm were measured for nitroxide monoradical, diradical, and tetraradical derivatives of 1,3-alternate calix[4]arenes, for two pegylated high-spin nitroxide diradicals, and for an azine-linked nitroxide diradical. The synthesis and characterization by SQUID (superconducting quantum interference device) magnetometry of one of the high-spin diradicals, in which nitroxides are conformationally constrained to be coplanar with the m-phenylene unit, is reported. The interspin distances ranged from about 5-9 A, and the magnitude of the exchange interaction ranged from >150 to >0.1 K. 1/T1 and 1/Tm were measured by long-pulse saturation recovery, three-pulse inversion recovery, and two-pulse echo decay at X-band (9.5 GHz) and Q-band (35 GHz). For a diradical with interspin distance about 9 A, relaxation rates were only slightly faster than for a monoradical with analogous structure. For interspin distances of about 5-6 A, relaxation rates in glassy solvents up to 300 K increased in the order monoradical < diradical < tetraradical. Modulation of electron-electron interaction enhanced relaxation via the direct, Raman, and local mode processes. The largest differences in 1/T1 were observed below 10 K, where the direct process dominates. For the three diradicals with comparable magnitude of dipolar interaction, 1/Tm and 1/T1 were faster for the molecules with more flexible structures. Relaxation rates were faster in the less rigid low-polarity sucrose octaacetate glass than in the more rigid 4:1 toluene/chloroform or in hydrogen-bonded glycerol glasses, which highlights the impact of motion on relaxation.
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Affiliation(s)
- Hideo Sato
- Department of Chemistry and Biochemistry, 2101 East Wesley Avenue, University of Denver, Denver, CO 80208-2436, USA
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Sato H, Bottle SE, Blinco JP, Micallef AS, Eaton GR, Eaton SS. Electron spin-lattice relaxation of nitroxyl radicals in temperature ranges that span glassy solutions to low-viscosity liquids. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 2008; 191:66-77. [PMID: 18166493 PMCID: PMC2671210 DOI: 10.1016/j.jmr.2007.12.003] [Citation(s) in RCA: 51] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/28/2007] [Revised: 12/07/2007] [Accepted: 12/07/2007] [Indexed: 05/12/2023]
Abstract
Electron spin-lattice relaxation rates, 1/T1, at X-band of nitroxyl radicals (4-hydroxy-2,2,6,6-tetramethylpiperidin-1-oxyl, 4-oxo-2,2,6,6-tetramethylpiperidin-1-oxyl, 3-carbamoyl-2,2,5,5-tetramethylpyrrolidin-1-oxyl and 3-carbamoyl-2,2,5,5-tetramethylpyrrolin-1-oxyl) in glass-forming solvents (decalin, glycerol, 3-methylpentane, o-terphenyl, 1-propanol, sorbitol, sucrose octaacetate, and 1:1 water:glycerol) at temperatures between 100 and 300K were measured by long-pulse saturation recovery to investigate the relaxation processes in slow-to-fast tumbling regimes. A subset of samples was also studied at lower temperatures or at Q-band. Tumbling correlation times were calculated from continuous wave lineshapes. Temperature dependence and isotope substitution (2H and 15N) were used to distinguish the contributions of various processes. Below about 100K relaxation is dominated by the Raman process. At higher temperatures, but below the glass transition temperature, a local mode process makes significant contributions. Above the glass transition temperature, increased rates of molecular tumbling modulate nuclear hyperfine and g anisotropy. The contribution from spin rotation is very small. Relaxation rates at X-band and Q-band are similar. The dependence of 1/T1 on tumbling correlation times fits better with the Cole-Davidson spectral density function than with the Bloembergen-Purcell-Pound model.
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Affiliation(s)
- Hideo Sato
- Department of Chemistry and Biochemistry, University of Denver, Denver, Colorado 80208
| | - Steven E. Bottle
- ARC Centre of Excellence for Free Radical Chemistry and Biotechnology, School of Physical and Chemical Sciences, Queensland University of Technology, GPO Box 2434 Q4001, Australia
| | - James P. Blinco
- ARC Centre of Excellence for Free Radical Chemistry and Biotechnology, School of Physical and Chemical Sciences, Queensland University of Technology, GPO Box 2434 Q4001, Australia
| | - Aaron S. Micallef
- ARC Centre of Excellence for Free Radical Chemistry and Biotechnology, School of Physical and Chemical Sciences, Queensland University of Technology, GPO Box 2434 Q4001, Australia
| | - Gareth R. Eaton
- Department of Chemistry and Biochemistry, University of Denver, Denver, Colorado 80208
| | - Sandra S. Eaton
- Department of Chemistry and Biochemistry, University of Denver, Denver, Colorado 80208
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Mailer C, Nielsen RD, Robinson BH. Explanation of spin-lattice relaxation rates of spin labels obtained with multifrequency saturation recovery EPR. J Phys Chem A 2007; 109:4049-61. [PMID: 16833727 DOI: 10.1021/jp044671l] [Citation(s) in RCA: 50] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Electron paramagnetic resonance (EPR) pulsed saturation recovery (pSR) measurements of spin-lattice relaxation rates have been made on nitroxide-containing fatty acids embedded in lipid bilayers by Hyde and co-workers. The data have been collected for a number of spin-labeled fatty acids at several microwave spectrometer frequencies (from 2 to 35 GHz). We compare these spin-lattice relaxation rates to those predicted by the Redfield theory incorporating several mechanisms. The dominant relaxation mechanism at low spectrometer frequencies is the electron-nuclear dipolar (END) process, with spin rotation (SR), chemical shift anisotropy (CSA), and a generalized spin diffusion (GSD) mechanism all contributing. The use of a wide range of spectrometer frequencies makes clear that the dynamics cannot be modeled adequately by rigid-body isotropic rotational motion. The dynamics of rigid-body anisotropic rotational motion is sufficient to explain the experimental relaxation rates within the experimental error. More refined models of the motion could have been considered, and our analysis does not rule them out. However, the results demonstrate that measurements at only two suitably chosen spectrometer frequencies are sufficient to distinguish anisotropic from isotropic motion. The results presented demonstrate that the principal mechanisms responsible for anisotropically driven spin-lattice relaxation are well understood in the liquids regime.
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Affiliation(s)
- Colin Mailer
- Department of Radiology, University of Chicago, Chicago, Illinois, USA
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Owenius R, Eaton GR, Eaton SS. Frequency (250 MHz to 9.2 GHz) and viscosity dependence of electron spin relaxation of triarylmethyl radicals at room temperature. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 2005; 172:168-75. [PMID: 15589420 DOI: 10.1016/j.jmr.2004.10.007] [Citation(s) in RCA: 67] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/12/2004] [Indexed: 05/24/2023]
Abstract
Electron spin relaxation times for four triarylmethyl (trityl) radicals at room temperature were measured by long-pulse saturation recovery, inversion recovery, and electron spin echo at 250 MHz, 1.5, 3.1, and 9.2 GHz in mixtures of water and glycerol. At 250 MHz T(1) is shorter than at X-band and more strongly dependent on viscosity. The enhanced relaxation at 250 MHz is attributed to modulation of electron-proton dipolar coupling by tumbling of the trityl radicals at rates that are comparable to the reciprocal of the resonance frequency. Deuteration of the solvent was used to distinguish relaxation due to solvent protons from the relaxation due to intra-molecular electron-proton interactions at 250 MHz. For trityl-CD(3), which contains no protons, modulation of dipolar interaction with solvent protons dominates T(1). For proton-containing radicals the relative importance of modulation of intra- and inter-molecular proton interactions varies with solution viscosity. The viscosity and frequency dependence of T(1) was modeled based on dipolar interaction with a defined number of protons at specified distances from the unpaired electron. At each of the frequencies examined T(2) decreases with increasing viscosity consistent with contributions from T(1) and from incomplete motional averaging of anisotropic hyperfine interaction.
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Affiliation(s)
- Rikard Owenius
- Department of Chemistry and Biochemistry, University of Denver, Denver, CO 80208, USA
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