1
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Gómez S, Cappelli C. The Role of Hydrogen Bonding in the Raman Spectral Signals of Caffeine in Aqueous Solution. Molecules 2024; 29:3035. [PMID: 38998986 PMCID: PMC11243038 DOI: 10.3390/molecules29133035] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/06/2024] [Revised: 06/22/2024] [Accepted: 06/23/2024] [Indexed: 07/14/2024] Open
Abstract
The identification and quantification of caffeine is a common need in the food and pharmaceutical industries and lately also in the field of environmental science. For that purpose, Raman spectroscopy has been used as an analytical technique, but the interpretation of the spectra requires reliable and accurate computational protocols, especially as regards the Resonance Raman (RR) variant. Herein, caffeine solutions are sampled using Molecular Dynamics simulations. Upon quantification of the strength of the non-covalent intermolecular interactions such as hydrogen bonding between caffeine and water, UV-Vis, Raman, and RR spectra are computed. The results provide general insights into the hydrogen bonding role in mediating the Raman spectral signals of caffeine in aqueous solution. Also, by analyzing the dependence of RR enhancement on the absorption spectrum of caffeine, it is proposed that the sensitivity of the RR technique could be exploited at excitation wavelengths moderately far from 266 nm, yet achieving very low detection limits in the quantification caffeine content.
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Affiliation(s)
- Sara Gómez
- Scuola Normale Superiore, Classe di Scienze, Piazza dei Cavalieri 7, 56126 Pisa, Italy
| | - Chiara Cappelli
- Scuola Normale Superiore, Classe di Scienze, Piazza dei Cavalieri 7, 56126 Pisa, Italy
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2
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Mekarun J, Treepet S, Rujiravanit R, Theeramunkong S, Watthanaphanit A. Caffeine-Containing Emulsion: Influence of the HLB and Mixing Proportions, the Oil's Chemical Composition, and the Existence of Caffeine on Emulsion Properties. ACS OMEGA 2024; 9:2113-2122. [PMID: 38250370 PMCID: PMC10795154 DOI: 10.1021/acsomega.3c03674] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/25/2023] [Revised: 11/22/2023] [Accepted: 12/21/2023] [Indexed: 01/23/2024]
Abstract
This study employs a low-energy emulsification method to prepare caffeine-containing emulsions, denoted as Caf-EM. Three different oils, including coconut, sesame, and grape seed oils, are utilized along with the surfactants Span 80 and Tween 80. We investigate the influence of various factors, including (i) the hydrophilic-lipophilic balance (HLB) and surfactant ratio, (ii) the chemical composition of the oils, and (iii) the presence of caffeine, on the stability and size of emulsions. The results indicate that the HLB value and surfactant ratio are the most crucial factors affecting the emulsions' stability. The most stable Caf-EM formulation is achieved by combining mixed surfactants of Span 80 and Tween 80 with an optimal HLB value of 6.4 at a concentration of 15% (S15 to 6.4) across all oil types. This specific ratio also leads to significantly smaller emulsion droplet sizes than other ratios and is the only ratio that produces stable emulsions even without caffeine (denoted as EM). Notably, formulation S15-6.4 additionally causes a phase inversion from oil-in-water (O/W) to water-in-oil (W/O). Furthermore, the presence of caffeine in the water phase contributes to the formation of smaller and more stable emulsions. The particle size of Caf-EM is approximately 1.5 times smaller than that of EM. Regarding the oil's chemical composition, while there is a discernible trend in emulsion droplet size (coconut oil > grape seed oil > sesame oil), the differences within this sequence are insignificant, suggesting that the oil's chemical composition does not have a pronounced effect.
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Affiliation(s)
- Jiramet Mekarun
- Department
of Chemistry, Faculty of Science, Mahidol
University, Salaya 73170, Nakhon Pathom, Thailand
| | - Sasimaporn Treepet
- Department
of Chemistry, Faculty of Science, Mahidol
University, Salaya 73170, Nakhon Pathom, Thailand
| | - Ratana Rujiravanit
- The
Petroleum and Petrochemical College, Chulalongkorn
University, Bangkok 10330, Thailand
- Center
of Excellence on Petrochemical and Materials Technology, Chulalongkorn University, Bangkok 10330, Thailand
| | - Sewan Theeramunkong
- Thammasat
University Research Unit in Drug, Health Product Development and Application
(DHP-DA), Department of Pharmaceutical Sciences, Faculty of Pharmacy, Thammasat University, Pathum Thani 12120, Thailand
| | - Anyarat Watthanaphanit
- Department
of Chemistry, Faculty of Science, Mahidol
University, Salaya 73170, Nakhon Pathom, Thailand
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3
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Rajkamal A, Kim H. Theoretical verification on adsorptive removal of caffeine by carbon and nitrogen-based surfaces: Role of charge transfer, π electron occupancy, and temperature. CHEMOSPHERE 2023; 339:139667. [PMID: 37516324 DOI: 10.1016/j.chemosphere.2023.139667] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/21/2023] [Revised: 07/26/2023] [Accepted: 07/27/2023] [Indexed: 07/31/2023]
Abstract
Eliminating an emerging water pollutant, caffeine molecules, from an aqueous solution using carbon and nitrogen-based adsorbents is of significant interest to public health. These adsorbents have been shown to have decent adsorption capacity toward caffeine due to their surface functionality. Therefore, screening various carbon and nitrogen-based surfaces can be a better option for high-performance adsorbents to remove caffeine efficiently from wastewater. Herein, we present combined first principles and molecular dynamics quantification of the adsorption enthalpies of caffeine molecules on the possible active sites of carbon and nitrogen-based adsorbents (graphene, phagraphene, graphdiyne, single-wall carbon nanotube, fullerene, and graphitic carbon nitride) with the incorporation of Van der Waals interactions. From the DFT calculations, N-doped carbon surfaces show the highest adsorption energies of single and dimer CAF compared to pristine carbon-based adsorbents. A charge density difference and Bader charge analysis display that high charge transfer occurs between the caffeine's oxygen and the surface's nitrogen atoms. An abundance of π-electrons from the nitrogen atoms, composed of large electron clouds of aromatic rings on the graphitic carbon surface, tends to favor extensive π-π interactions with the caffeine molecule. The high value of pz electron occupancy (1.445) of N in the hexagonal ring of the graphitic surface transfers additional charge transfer, which leads to strong adsorption energy of CAF than pristine surfaces. Also, the g-C3N4 surface adsorbs the CAF molecule with higher adsorption than other N-doped carbon surfaces due to the high pz_eo (1.5448) of N atoms on the surface. At 310 K, the water molecules' kinetics aids the single and dimer caffeine molecules to adsorb with the highest adsorption energies on the active sites of g-C3N4 surfaces than graphene adsorbent.
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Affiliation(s)
- Anand Rajkamal
- Department of Energy Science and Technology, Environmental Waste Recycle Institute, Myongji University, Yongin, Gyeonggi-do 17058, Republic of Korea
| | - Hern Kim
- Department of Energy Science and Technology, Environmental Waste Recycle Institute, Myongji University, Yongin, Gyeonggi-do 17058, Republic of Korea.
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4
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Sevrioukova IF. Interaction of CYP3A4 with caffeine: First insights into multiple substrate binding. J Biol Chem 2023; 299:105117. [PMID: 37524132 PMCID: PMC10470200 DOI: 10.1016/j.jbc.2023.105117] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/08/2023] [Revised: 07/18/2023] [Accepted: 07/27/2023] [Indexed: 08/02/2023] Open
Abstract
Human cytochrome P450 3A4 (CYP3A4) is a major drug-metabolizing enzyme that shows extreme substrate promiscuity. Moreover, its large and malleable active site can simultaneously accommodate several substrate molecules of the same or different nature, which may lead to cooperative binding and allosteric behavior. Due to difficulty of crystallization of CYP3A4-substrate complexes, it remains unknown how multiple substrates can arrange in the active site. We determined crystal structures of CYP3A4 bound to three and six molecules of caffeine, a psychoactive alkaloid serving as a substrate and modulator of CYP3A4. In the ternary complex, one caffeine binds to the active site suitably for C8-hydroxylation, most preferable for CYP3A4. In the senary complex, three caffeine molecules stack parallel to the heme with the proximal ligand poised for 3-N-demethylation. However, the caffeine stack forms extensive hydrophobic interactions that could preclude product dissociation and multiple turnovers. In both complexes, caffeine is also bound in the substrate channel and on the outer surface known as a peripheral site. At all sites, aromatic stacking with the caffeine ring(s) is likely a dominant interaction, while direct and water-mediated polar contacts provide additional stabilization for the substrate-bound complexes. Protein-ligand interactions via the active site R212, intrachannel T224, and peripheral F219 were experimentally confirmed, and the latter two residues were identified as important for caffeine association. Collectively, the structural, spectral, and mutagenesis data provide valuable insights on the ligand binding mechanism and help better understand how purine-based pharmaceuticals and other aromatic compounds could interact with CYP3A4 and mediate drug-drug interactions.
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Affiliation(s)
- Irina F Sevrioukova
- Department of Molecular Biology and Biochemistry, University of California, Irvine, California, USA.
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5
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Collings K, Boisdon C, Sham TT, Skinley K, Oh HK, Prince T, Ahmed A, Pennington SH, Brownridge PJ, Edwards T, Biagini GA, Eyers CE, Lamb A, Myers P, Maher S. Attaching protein-adsorbing silica particles to the surface of cotton substrates for bioaerosol capture including SARS-CoV-2. Nat Commun 2023; 14:5033. [PMID: 37596260 PMCID: PMC10439164 DOI: 10.1038/s41467-023-40696-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/20/2022] [Accepted: 08/07/2023] [Indexed: 08/20/2023] Open
Abstract
The novel coronavirus pandemic (COVID-19) has necessitated a global increase in the use of face masks to limit the airborne spread of the virus. The global demand for personal protective equipment has at times led to shortages of face masks for the public, therefore makeshift masks have become commonplace. The severe acute respiratory syndrome caused by coronavirus-2 (SARS-CoV-2) has a spherical particle size of ~97 nm. However, the airborne transmission of this virus requires the expulsion of droplets, typically ~0.6-500 µm in diameter (by coughing, sneezing, breathing, and talking). In this paper, we propose a face covering that has been designed to effectively capture SARS-CoV-2 whilst providing uncompromised comfort and breathability for the wearer. Herein, we describe a material approach that uses amorphous silica microspheres attached to cotton fibres to capture bioaerosols, including SARS CoV-2. This has been demonstrated for the capture of aerosolised proteins (cytochrome c, myoglobin, ubiquitin, bovine serum albumin) and aerosolised inactivated SARS CoV-2, showing average filtration efficiencies of ~93% with minimal impact on breathability.
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Affiliation(s)
- Kieran Collings
- Department of Electrical Engineering and Electronics, University of Liverpool, Liverpool, UK
| | - Cedric Boisdon
- Department of Electrical Engineering and Electronics, University of Liverpool, Liverpool, UK
| | - Tung-Ting Sham
- Department of Electrical Engineering and Electronics, University of Liverpool, Liverpool, UK
| | - Kevin Skinley
- Department of Chemistry, University of Liverpool, Liverpool, UK
| | - Hyun-Kyung Oh
- Department of Electrical Engineering and Electronics, University of Liverpool, Liverpool, UK
| | - Tessa Prince
- Institute of Infection, Veterinary and Ecological Sciences, University of Liverpool, Liverpool, UK
| | - Adham Ahmed
- Department of Chemistry, University of Liverpool, Liverpool, UK
| | - Shaun H Pennington
- Centre for Drugs and Diagnostics, Department of Tropical Disease Biology, Liverpool School of Tropical Medicine, Liverpool, UK
| | - Philip J Brownridge
- Centre for Proteome Research, Department of Biochemistry & Systems Biology, Institute of Systems, Molecular & Integrative Biology, University of Liverpool, Liverpool, UK
| | - Thomas Edwards
- Centre for Drugs and Diagnostics, Department of Tropical Disease Biology, Liverpool School of Tropical Medicine, Liverpool, UK
| | - Giancarlo A Biagini
- Centre for Drugs and Diagnostics, Department of Tropical Disease Biology, Liverpool School of Tropical Medicine, Liverpool, UK
| | - Claire E Eyers
- Centre for Proteome Research, Department of Biochemistry & Systems Biology, Institute of Systems, Molecular & Integrative Biology, University of Liverpool, Liverpool, UK
| | - Amanda Lamb
- Faculty of Health and Life Sciences, University of Liverpool, Liverpool, UK
- Applied Health Insights Ltd, Cheshire, UK
| | - Peter Myers
- Department of Chemistry, University of Liverpool, Liverpool, UK.
| | - Simon Maher
- Department of Electrical Engineering and Electronics, University of Liverpool, Liverpool, UK.
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6
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Saraiva SM, Jacinto TA, Gonçalves AC, Gaspar D, Silva LR. Overview of Caffeine Effects on Human Health and Emerging Delivery Strategies. Pharmaceuticals (Basel) 2023; 16:1067. [PMID: 37630983 PMCID: PMC10459237 DOI: 10.3390/ph16081067] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/06/2023] [Revised: 07/23/2023] [Accepted: 07/24/2023] [Indexed: 08/27/2023] Open
Abstract
Caffeine is a naturally occurring alkaloid found in various plants. It acts as a stimulant, antioxidant, anti-inflammatory, and even an aid in pain management, and is found in several over-the-counter medications. This naturally derived bioactive compound is the best-known ingredient in coffee and other beverages, such as tea, soft drinks, and energy drinks, and is widely consumed worldwide. Therefore, it is extremely important to research the effects of this substance on the human body. With this in mind, caffeine and its derivatives have been extensively studied to evaluate its ability to prevent diseases and exert anti-aging and neuroprotective effects. This review is intended to provide an overview of caffeine's effects on cancer and cardiovascular, immunological, inflammatory, and neurological diseases, among others. The heavily researched area of caffeine in sports will also be discussed. Finally, recent advances in the development of novel nanocarrier-based formulations, to enhance the bioavailability of caffeine and its beneficial effects will be discussed.
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Affiliation(s)
- Sofia M. Saraiva
- CPIRN-UDI/IPG, Center of Potential and Innovation of Natural Resources, Research Unit for Inland Development (UDI), Polytechnic Institute of Guarda, 6300-559 Guarda, Portugal; (S.M.S.); (T.A.J.)
| | - Telma A. Jacinto
- CPIRN-UDI/IPG, Center of Potential and Innovation of Natural Resources, Research Unit for Inland Development (UDI), Polytechnic Institute of Guarda, 6300-559 Guarda, Portugal; (S.M.S.); (T.A.J.)
| | - Ana C. Gonçalves
- CICS-UBI—Health Sciences Research Centre, University of Beira Interior, 6201-001 Covilhã, Portugal;
| | - Dário Gaspar
- Department of Sport Sciences, University of Beira Interior, 6201-001 Covilhã, Portugal;
| | - Luís R. Silva
- CPIRN-UDI/IPG, Center of Potential and Innovation of Natural Resources, Research Unit for Inland Development (UDI), Polytechnic Institute of Guarda, 6300-559 Guarda, Portugal; (S.M.S.); (T.A.J.)
- CICS-UBI—Health Sciences Research Centre, University of Beira Interior, 6201-001 Covilhã, Portugal;
- Department of Chemical Engineering, University of Coimbra, CIEPQPF, Rua Sílvio Lima, Pólo II—Pinhal de Marrocos, 3030-790 Coimbra, Portugal
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7
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Shen Y, Cruz-Cabeza AJ, Azzouz O, Edkins K. Using Prenucleation Aggregation of Caffeine-Benzoic Acid as a Rapid Indication of Co-crystallization from Solutions. Mol Pharm 2023; 20:1942-1950. [PMID: 36942815 DOI: 10.1021/acs.molpharmaceut.2c00829] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/23/2023]
Abstract
Co-crystal design is a convenient way to remedy the poor biopharmaceutical properties of drugs. Most studies focus on experimental co-crystal screening or computational prediction, but hardly any work has been done toward fast, efficient, and reliable prediction of solution crystallization for co-crystal formation. Here, we study the caffeine-benzoic acid co-crystal system, due to its reported difficulty to crystallize from the solution phase. With this work, we investigate whether there is a link between prenucleation aggregation in solution and co-crystal formation and how to harness this for crystallization prediction. 1H and 13C NMR spectroscopy is used to study the prenucleation interaction between caffeine and benzoic acid in methanol, acetone, and acetonitrile as examples of common solvents. In this system, crystallization from methanol leads to no co-crystallization, from acetone to concomitant crystallization of co-crystal and caffeine, and from acetonitrile to pure co-crystal formation from solution. Strong heteromeric dimers were found to exist in all three solvents. Ternary phase diagrams were defined and a solution-accessible co-crystal region was found for all solvents. For this system, the prenucleation clusters found in solution could be linked to the crystallization of the co-crystal. Crystallization from DMSO did not yield the co-crystal and there were no detectable prenucleation aggregates. NMR spectroscopy to probe dimers in solution can thus be used as a fast, reliable, and promising tool to predict co-crystallization from specific solvents and to screen for suitable solvents for manufacturing and scale-up.
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Affiliation(s)
- Yichun Shen
- School of Health Sciences, University of Manchester, Manchester M13 9PT, U.K
| | | | - Ossama Azzouz
- School of Health Sciences, University of Manchester, Manchester M13 9PT, U.K
| | - Katharina Edkins
- School of Health Sciences, University of Manchester, Manchester M13 9PT, U.K
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8
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Imshinetskiy I, Kashepa V, Nadaraia K, Mashtalyar D, Suchkov S, Zadorozhny P, Ustinov A, Sinebryukhov S, Gnedenkov S. PEO Coatings Modified with Halloysite Nanotubes: Composition, Properties, and Release Performance. Int J Mol Sci 2022; 24:ijms24010305. [PMID: 36613748 PMCID: PMC9820610 DOI: 10.3390/ijms24010305] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/29/2022] [Revised: 12/20/2022] [Accepted: 12/20/2022] [Indexed: 12/28/2022] Open
Abstract
In this work, the properties of the coatings formed on the Mg-Mn-Ce alloy by plasma electrolytic oxidation (PEO) in electrolytes containing halloysite nanotubes (HNTs) were investigated. The incorporation of halloysite nanotubes into the PEO coatings improved their mechanical characteristics, increased thickness, and corrosion resistance. The studied layers reduced corrosion current density by more than two times in comparison with the base PEO layer without HNTs (from 1.1 × 10-7 A/cm2 to 4.9 × 10-8 A/cm2). The presence of halloysite nanotubes and products of their dihydroxylation that were formed under the PEO conditions had a positive impact on the microhardness of the obtained layers (this parameter increased from 4.5 ± 0.4 GPa to 7.3 ± 0.5 GPa). In comparison with the base PEO layer, coatings containing halloysite nanotubes exhibited sustained release and higher adsorption capacity regarding caffeine.
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9
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Zeinalipour-Yazdi CD. A DFT study of the interaction of aspirin, paracetamol and caffeine with one water molecule. J Mol Model 2022; 28:285. [PMID: 36056215 PMCID: PMC9439270 DOI: 10.1007/s00894-022-05258-w] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/11/2022] [Accepted: 07/31/2022] [Indexed: 11/28/2022]
Abstract
We have studied the interaction of water with three important analgesics, aspirin, paracetamol and caffeine using DFT calculations and FTIR-ATR spectroscopy. In our study, water is used as a probe molecule to reveal the various H-bonding sites on the electrostatic potential energy surface of the analgesics. We find that water forms a strong double H-bond with the COOH group of aspirin and that the oxygen of the ester group can become H-bond acceptors. Paracetamol forms the strongest H-bond with water at the hydroxyl group and weaker H-bonds with the C = O group and the N–H group. Caffeine forms the strongest H-bond with water at the top C = O group and can form additional H-bonds with the bottom C = O group and the nitrogen of the imidazole ring. These studies may help to better understand the solvation of these analgesics in water.
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10
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Gilani AG, Haghighat AG. A comparative photophysical study of molecular associative of structurally similar phenothiazine dyes in aqueous solutions of caffeine. J Mol Struct 2022. [DOI: 10.1016/j.molstruc.2022.133861] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/16/2022]
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11
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Miotto MC, Weninger G, Dridi H, Yuan Q, Liu Y, Wronska A, Melville Z, Sittenfeld L, Reiken S, Marks AR. Structural analyses of human ryanodine receptor type 2 channels reveal the mechanisms for sudden cardiac death and treatment. SCIENCE ADVANCES 2022; 8:eabo1272. [PMID: 35857850 PMCID: PMC9299551 DOI: 10.1126/sciadv.abo1272] [Citation(s) in RCA: 18] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/14/2022] [Accepted: 06/03/2022] [Indexed: 05/29/2023]
Abstract
Ryanodine receptor type 2 (RyR2) mutations have been linked to an inherited form of exercise-induced sudden cardiac death called catecholaminergic polymorphic ventricular tachycardia (CPVT). CPVT results from stress-induced sarcoplasmic reticular Ca2+ leak via the mutant RyR2 channels during diastole. We present atomic models of human wild-type (WT) RyR2 and the CPVT mutant RyR2-R2474S determined by cryo-electron microscopy with overall resolutions in the range of 2.6 to 3.6 Å, and reaching local resolutions of 2.25 Å, unprecedented for RyR2 channels. Under nonactivating conditions, the RyR2-R2474S channel is in a "primed" state between the closed and open states of WT RyR2, rendering it more sensitive to activation that results in stress-induced Ca2+ leak. The Rycal drug ARM210 binds to RyR2-R2474S, reverting the primed state toward the closed state. Together, these studies provide a mechanism for CPVT and for the therapeutic actions of ARM210.
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Affiliation(s)
- Marco C. Miotto
- Department of Physiology and Cellular Biophysics, Columbia University Vagelos College of Physicians and Surgeons, New York, NY, USA
- Clyde and Helen Wu Center for Molecular Cardiology, Columbia University, New York, NY, USA
| | - Gunnar Weninger
- Department of Physiology and Cellular Biophysics, Columbia University Vagelos College of Physicians and Surgeons, New York, NY, USA
- Clyde and Helen Wu Center for Molecular Cardiology, Columbia University, New York, NY, USA
| | - Haikel Dridi
- Department of Physiology and Cellular Biophysics, Columbia University Vagelos College of Physicians and Surgeons, New York, NY, USA
- Clyde and Helen Wu Center for Molecular Cardiology, Columbia University, New York, NY, USA
| | - Qi Yuan
- Department of Physiology and Cellular Biophysics, Columbia University Vagelos College of Physicians and Surgeons, New York, NY, USA
- Clyde and Helen Wu Center for Molecular Cardiology, Columbia University, New York, NY, USA
| | - Yang Liu
- Department of Physiology and Cellular Biophysics, Columbia University Vagelos College of Physicians and Surgeons, New York, NY, USA
- Clyde and Helen Wu Center for Molecular Cardiology, Columbia University, New York, NY, USA
| | - Anetta Wronska
- Department of Physiology and Cellular Biophysics, Columbia University Vagelos College of Physicians and Surgeons, New York, NY, USA
- Clyde and Helen Wu Center for Molecular Cardiology, Columbia University, New York, NY, USA
| | - Zephan Melville
- Department of Physiology and Cellular Biophysics, Columbia University Vagelos College of Physicians and Surgeons, New York, NY, USA
- Clyde and Helen Wu Center for Molecular Cardiology, Columbia University, New York, NY, USA
| | - Leah Sittenfeld
- Department of Physiology and Cellular Biophysics, Columbia University Vagelos College of Physicians and Surgeons, New York, NY, USA
- Clyde and Helen Wu Center for Molecular Cardiology, Columbia University, New York, NY, USA
| | - Steven Reiken
- Department of Physiology and Cellular Biophysics, Columbia University Vagelos College of Physicians and Surgeons, New York, NY, USA
- Clyde and Helen Wu Center for Molecular Cardiology, Columbia University, New York, NY, USA
| | - Andrew R. Marks
- Department of Physiology and Cellular Biophysics, Columbia University Vagelos College of Physicians and Surgeons, New York, NY, USA
- Clyde and Helen Wu Center for Molecular Cardiology, Columbia University, New York, NY, USA
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12
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Devi M, Paul S. The chaotropic effect of ions on the self-aggregating propensity of Whitlock's molecular tweezers. Phys Chem Chem Phys 2022; 24:14452-14471. [PMID: 35661176 DOI: 10.1039/d2cp00033d] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Molecular tweezers feature the first class of artificial receptors to pique the interest of researchers and emerge as an effective therapeutic candidate. The exceptional structure and exquisite binding specificity of tweezers establish this overall class of receptors as a promising tool, with abundant applications. However, their inclination to self-aggregate by mutual π-π stacking interactions of their aromatic arms diminishes their efficacy as a therapeutic candidate. Therefore, following up on sporadic studies, since the discovery of the Hofmeister series, on the ability of ions to either solvate (salting-in) or induce aggregation (salting-out) of hydrophobic solutes, the notions of ion-specificity effects are utilized on tweezer moieties. The impacts of three different aluminum salts bearing anions Cl-, ClO4- and SCN- on the self-association propensity of Whitlock's caffeine-pincered molecular tweezers are investigated, with a specific emphasis placed on elucidating the varied behavior of the ions on the hydration ability of tweezers. The comparative investigation is conducted employing a series of all-atom molecular dynamics simulations of five tweezer molecules in pure water and three salt solutions, at two different concentrations each, maintaining a temperature of 300 K and a pressure of 1 atm, respectively. Radial distribution functions, coordination numbers, and SASA calculations display a steady reduction in the aggregation proclivity of the receptor molecules with an increase in salt concentration, as progressed along the Hofmeister series. Orientational preferences between the tweezer arms reveal a disruptive effect in the regular π-π stacking interactions, in the presence of high concentrations of ClO4- and SCN- ions, while preferential interactions and tetrahedral order parameters unveil the underlying mechanism, by which the anions alter the solubility of the hydrophobic molecules. Overall, it is observed that SCN- exhibits the highest salting-in effect, followed by ClO4-, with both anions inhibiting tweezer aggregation through different mechanisms. ClO4- ions impart an effect by moderately interacting with the solute molecules as well as modifying the water structure of the bulk solution promoting solvation, whereas, SCN- ions engage entirely in interaction with specific tweezer sites. Cl- being the most charge-dense of the three anionic species experiences stronger hydration and therefore, imparts a very negligible salting-in effect.
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Affiliation(s)
- Madhusmita Devi
- Department of Chemistry, Indian Institute of Technology, Guwahati Assam, 781039, India.
| | - Sandip Paul
- Department of Chemistry, Indian Institute of Technology, Guwahati Assam, 781039, India.
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13
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Hervø-Hansen S, Heyda J, Lund M, Matubayasi N. Anion-cation contrast of small molecule solvation in salt solutions. Phys Chem Chem Phys 2022; 24:3238-3249. [PMID: 35044392 PMCID: PMC8809138 DOI: 10.1039/d1cp04129k] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/09/2021] [Accepted: 12/24/2021] [Indexed: 11/21/2022]
Abstract
The contributions from anions and cations from salt are inseparable in their perturbation of molecular systems by experimental and computational methods, rendering it difficult to dissect the effects exerted by the anions and cations individually. Here we investigate the solvation of a small molecule, caffeine, and its perturbation by monovalent salts from various parts of the Hofmeister series. Using molecular dynamics and the energy-representation theory of solvation, we estimate the solvation free energy of caffeine and decompose it into the contributions from anions, cations, and water. We also decompose the contributions arising from the solute-solvent and solute-ions interactions and that from excluded volume, enabling us to pin-point the mechanism of salt. Anions and cations revealed high contrast in their perturbation of caffeine solvation, with the cations salting-in caffeine via binding to the polar ketone groups, while the anions were found to be salting-out via perturbations of water. In agreement with previous findings, the perturbation by salt is mostly anion dependent, with the magnitude of the excluded-volume effect found to be the governing mechanism. The free-energy decomposition as conducted in the present work can be useful to understand ion-specific effects and the associated Hofmeister series.
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Affiliation(s)
- Stefan Hervø-Hansen
- Division of Theoretical Chemistry, Department of Chemistry, Lund University, Lund SE 221 00, Sweden.
| | - Jan Heyda
- Department of Physical Chemistry, University of Chemistry and Technology, Prague CZ-16628, Czech Republic.
| | - Mikael Lund
- Division of Theoretical Chemistry, Department of Chemistry, Lund University, Lund SE 221 00, Sweden.
- Lund Institute for Advanced Neutron and X-ray Science (LINXS), Lund University, Lund, Sweden
| | - Nobuyuki Matubayasi
- Division of Chemical Engineering, Graduate School of Engineering Science, Osaka University, Toyonaka, Osaka 560-8531, Japan.
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14
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Miscibility and Solubility of Caffeine and Theophylline in Hydroxypropyl Methylcellulose. Pharmaceutics 2021; 13:pharmaceutics13111836. [PMID: 34834251 PMCID: PMC8624303 DOI: 10.3390/pharmaceutics13111836] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/08/2021] [Revised: 10/26/2021] [Accepted: 10/29/2021] [Indexed: 12/14/2022] Open
Abstract
As amorphization may improve the solubility and bioavailability of a drug substance, the aim of this work was to assess to what extent the crystallinity of caffeine (CAF) and theophylline (TF) can be reduced by homogenization with a polymeric excipient. To realize this purpose, the physical mixtures of both methylxanthines with hydroxypropyl methylcellulose (HPMC) were examined using differential scanning calorimetry (DSC), hot-stage microscopy (HSM), Fourier-transform infrared (FTIR) and Raman spectroscopy. Moreover, phase diagrams for the physical mixtures were calculated using theoretical data. Results of DSC experiments suggested that both CAF and TF underwent amorphization, which indicated proportional loss of crystallinity for methylxanthines in the mixtures with HPMC. Additionally, HSM revealed that no other crystalline or amorphous phases were created other than those observed for CAF and TF. FTIR and Raman spectra displayed all the bands characteristic for methylxanthines in mixtures with HPMC, thereby excluding changes in their chemical structures. However, changes to the intensity of the bands created by hydrogen bonds imply the formation of hydrogen bonding in the carbonyl group of methylxanthines and the methyl polymer group. This is consistent with data obtained using principal component analysis. The findings of these studies revealed the quantities of methylxanthines which may be dissolved in the polymer at a given temperature and the composition at which methylxanthines and polymer are sufficiently miscible to form a solid solution.
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15
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Abstract
Caffeine is not only a widely consumed active stimulant, but it is also a model molecule commonly used in pharmaceutical sciences. In this work, by performing quartz-crystal microbalance and neutron reflectometry experiments we investigate the interaction of caffeine molecules with a model lipid membrane. We determined that caffeine molecules are not able to spontaneously partition from an aqueous environment, enriched in caffeine, into a bilayer. Caffeine could be however included in solid-supported lipid bilayers if present with lipids during self-assembly. In this case, thanks to surface-sensitive techniques, we determined that caffeine molecules are preferentially located in the hydrophobic region of the membrane. These results are highly relevant for the development of new drug delivery vectors, as well as for a deeper understanding of the membrane permeation role of purine molecules.
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Affiliation(s)
- Letizia Tavagnacco
- CNR-ISC and Department of Physics, Sapienza University of Rome, Piazzale A. Moro 2, 00185 Rome, Italy
| | - Giacomo Corucci
- Institut Laue-Langevin, 71 avenue des Martyrs, 38000 Grenoble, France
| | - Yuri Gerelli
- Department of Life and Environmental Sciences, Marche Polytechnic University, Via Brecce Bianche, 60121 Ancona, Italy
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16
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Shumilin I, Harries D. Cyclodextrin solubilization in hydrated reline: Resolving the unique stabilization mechanism in a deep eutectic solvent. J Chem Phys 2021; 154:224505. [PMID: 34241212 DOI: 10.1063/5.0052537] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
By complexing with hydrophobic compounds, cyclodextrins afford increased solubility and thermodynamic stability to hardly soluble compounds, thereby underlining their invaluable applications in pharmaceutical and other industries. However, common cyclodextrins such as β-cyclodextrin, suffer from limited solubility in water, which often leads to precipitation and formation of unfavorable aggregates, driving the search for better solvents. Here, we study the solvation of cyclodextrin in deep eutectic solvents (DESs), environmentally friendly media that possess unique properties. We focus on reline, the DES formed from choline chloride and urea, and resolve the mechanism through which its constituents elevate β-cyclodextrin solubility in hydrated solutions compared to pure water or dry reline. Combining experiments and simulations, we determine that the remarkable solubilization of β-cyclodextrin in hydrated reline is mostly due to the inclusion of urea inside β-cyclodextrin's cavity and at its exterior surfaces. The role of choline chloride in further increasing solvation is twofold. First, it increases urea's solubility beyond the saturation limit in water, ultimately leading to much higher β-cyclodextrin solubility in hydrated reline in comparison to aqueous urea solutions. Second, choline chloride increases urea's accumulation in β-cyclodextrin's vicinity. Specifically, we find that the accumulation of urea becomes stronger at high reline concentrations, as the solution transitions from reline-in-water to water-in-reline, where water alone cannot be regarded as the solvent. Simulations further suggest that in dry DES, the mechanism of β-cyclodextrin solvation changes so that reline acts as a quasi-single component solvent that lacks preference for the accumulation of urea or choline chloride around β-cyclodextrin.
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Affiliation(s)
- Ilan Shumilin
- The Fritz Haber Research Center, and The Harvey M. Krueger Family Center for Nanoscience and Nanotechnology, Edmond J. Safra Campus, Institute of Chemistry, The Hebrew University, Jerusalem 9190401, Israel
| | - Daniel Harries
- The Fritz Haber Research Center, and The Harvey M. Krueger Family Center for Nanoscience and Nanotechnology, Edmond J. Safra Campus, Institute of Chemistry, The Hebrew University, Jerusalem 9190401, Israel
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17
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Jose J, Subramanian V, Shaji S, Sreeja PB. An electrochemical sensor for nanomolar detection of caffeine based on nicotinic acid hydrazide anchored on graphene oxide (NAHGO). Sci Rep 2021; 11:11662. [PMID: 34083560 PMCID: PMC8175555 DOI: 10.1038/s41598-021-89427-6] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/05/2020] [Accepted: 04/05/2021] [Indexed: 01/17/2023] Open
Abstract
A simple modified sensor was developed with nicotinic acid hydrazide anchored on graphene oxide (NAHGO), by ultrasonic-assisted chemical route, using hydroxy benzotriazole as a mediator. Structural and morphologies of NAHGO samples were investigated in detail by Fourier-Transform Infrared spectroscopy (FT-IR), Powder X-ray diffraction (P-XRD), Raman spectroscopy, Scanning electron microscopy (SEM), X-ray photoelectron spectroscopy (XPS), and Thermogravimetric analysis (TGA). The detailed morphological examination and electrochemical studies revealed the delaminated sheet with the tube-like structure of NAHGO provided the route for more electroactive surface which influenced the electrooxidation of caffeine with increased current. The electrochemical behaviour of NAHGO on a glassy carbon electrode (GCE) for caffeine detection was demonstrated by employing voltammetric techniques. The influence of scan rate, pH, and concentration on caffeine's peak current was also studied. The NAHGO sensor was employed for the determination of caffeine in imol plus and energy drinks. The detection limit determined was 8.7 × 10-9 M, and the best value was reported so far. The results show that NAHGO modified electrodes are one of the best preferences to establish new, efficient, and reliable analytical tools for the detection of caffeine.
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Affiliation(s)
- Jemini Jose
- Department of Chemistry, CHRIST (Deemed to be University), Bengaluru, Karnataka, 560029, India
| | - Viswanathan Subramanian
- Department of Industrial Chemistry, Alagappa University, Karaikudi, Tamil Nadu, 630003, India
| | - Sadasivan Shaji
- Facultad de Ingeniería Mecánica y Eléctrica, Universidad Autónoma de Nuevo León, 66455, San Nicolás de los Garza, Nuevo León, Mexico
| | - P B Sreeja
- Department of Chemistry, CHRIST (Deemed to be University), Bengaluru, Karnataka, 560029, India.
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18
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On the relationship between potential of zero charge and solvent dynamics in the reversible hydrogen electrode. J Catal 2021. [DOI: 10.1016/j.jcat.2021.04.008] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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19
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Xin Y, Yin F. A combined experimental and molecular simulation study of lube oil dewaxing solvent recovery using membrane. Sep Purif Technol 2021. [DOI: 10.1016/j.seppur.2020.118278] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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20
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21
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The Influence of a Surface Treatment of Metallic Titanium on the Photocatalytic Properties of TiO2 Nanotubes Grown by Anodic Oxidation. Catalysts 2020. [DOI: 10.3390/catal10070803] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022] Open
Abstract
Titanium dioxide (TiO2) nanotubes obtained by the anodic oxidation of titanium metal foils can be used for the photocatalytic degradation of organic pollutants. The aim of our study was to determine the influence of the titanium foil’s surface treatment on the final morphology of the TiO2 nanotubes and their photocatalytic activity. In our experiments, we used two different titanium foils that were electropolished or untreated prior to the anodic oxidation. The morphologies of the starting titanium foils and the resulting TiO2 nanotube layers were investigated and the photocatalytic activities measured by the decomposition of caffeine under UV irradiation. Our results showed that electropolishing of the starting foils produced a more uniform and smoother TiO2 nanotubes surface. In contrast, the TiO2 nanotube surfaces from untreated titanium foils mimic the initial surface roughness of the titanium foil. A comparison of the photocatalytic properties of the TiO2 nanotube layers obtained from the untreated and electropolished titanium foils showed that electropolishing does not necessarily improve the photocatalytic properties of the resulting TiO2 nanotube layer. It was found that the determining factors influencing the photocatalytic activity are the chemical impurities (Ti-nitride) on the surface of the titanium foils and the surface roughness of the TiO2 nanotube layer. The highest photocatalytic activity was achieved with the anodized untreated foil with the minimal presence of Ti-nitride and a relatively high roughness of the TiO2 nanotubes.
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22
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Intikhab S, Rebollar L, Li Y, Pai R, Kalra V, Tang MH, Snyder JD. Caffeinated Interfaces Enhance Alkaline Hydrogen Electrocatalysis. ACS Catal 2020. [DOI: 10.1021/acscatal.0c01635] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Saad Intikhab
- Department of Chemical and Biological Engineering, Drexel University, Philadelphia, Pennsylvania 19104, United States
| | - Luis Rebollar
- Department of Chemical and Biological Engineering, Drexel University, Philadelphia, Pennsylvania 19104, United States
| | - Yawei Li
- Department of Chemical and Biological Engineering, Drexel University, Philadelphia, Pennsylvania 19104, United States
| | - Rahul Pai
- Department of Chemical and Biological Engineering, Drexel University, Philadelphia, Pennsylvania 19104, United States
| | - Vibha Kalra
- Department of Chemical and Biological Engineering, Drexel University, Philadelphia, Pennsylvania 19104, United States
| | - Maureen H. Tang
- Department of Chemical and Biological Engineering, Drexel University, Philadelphia, Pennsylvania 19104, United States
| | - Joshua D. Snyder
- Department of Chemical and Biological Engineering, Drexel University, Philadelphia, Pennsylvania 19104, United States
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Gómez S, Giovannini T, Cappelli C. Absorption spectra of xanthines in aqueous solution: a computational study. Phys Chem Chem Phys 2020; 22:5929-5941. [PMID: 32115599 DOI: 10.1039/c9cp05420k] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
We present a detailed computational analysis of the UV/Vis spectra of caffeine, paraxanthine and theophylline in aqueous solution. A hierarchy of solvation approaches for modeling the aqueous environment have been tested, ranging from the continuum model to the non-polarizable and polarizable quantum mechanical (QM)/molecular mechanics (MM) models, with and without the explicit inclusion of water molecules in the QM portion. The computed results are directly compared with the experimental data, thus highlighting the role of electrostatic, polarization and hydrogen boding solute-solvent interactions.
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Affiliation(s)
- Sara Gómez
- Scuola Normale Superiore, Classe di Scienze, Piazza dei Cavalieri 7, 56126 Pisa, Italy.
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24
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Physicochemical and antifungal properties of waterborne polymer nanoparticles synthesized with caffeine. Colloid Polym Sci 2020. [DOI: 10.1007/s00396-020-04615-6] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]
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25
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Reddy V, Saharay M. Solubility of Caffeine in Supercritical CO 2: A Molecular Dynamics Simulation Study. J Phys Chem B 2019; 123:9685-9691. [PMID: 31617358 DOI: 10.1021/acs.jpcb.9b08351] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The extraction of caffeine from green tea leaves and cocoa beans is a common industrial process for the production of decaffeinated beverages and pharmaceuticals. The choice of the solvent critically determines the yield of this extraction process. Being an environmentally benign and recyclable solvent, supercritical carbon dioxide (scCO2) has emerged as the most desirable green solvent for caffeine extraction. The present study investigates the solvation properties of caffeine in scCO2 at two different temperatures (318 and 350 K) using molecular dynamics simulations. Unlike in water, the caffeine molecules in scCO2 do not aggregate to form clusters due to relatively stronger caffeine-CO2 interactions. A well-structured scCO2 solvent shell envelops each caffeine molecule as a result of strong electron-donor-acceptor (EDA) and hydrogen-bonding interactions between these two species. Upon heating, although marginal site-specific changes in the distribution of nearest CO2 around caffeine are observed, the overall distribution is retained. At a higher temperature, the caffeine-CO2 hydrogen-bonding interactions are weakened, while their EDA interactions become relatively stronger. The results underscore the importance of the interplay of these interactions in determining stable solvent structures and solubility of caffeine in scCO2.
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Affiliation(s)
- Vishwanath Reddy
- Department of Physics, University College of Science , Osmania University , Hyderabad 500007 , Telangana , India
| | - Moumita Saharay
- Department of Physics, University College of Science , Osmania University , Hyderabad 500007 , Telangana , India
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26
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Shumilin I, Allolio C, Harries D. How Sugars Modify Caffeine Self-Association and Solubility: Resolving a Mechanism of Selective Hydrotropy. J Am Chem Soc 2019; 141:18056-18063. [DOI: 10.1021/jacs.9b07056] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/02/2023]
Affiliation(s)
- Ilan Shumilin
- Institute of Chemistry, The Fritz Haber Research Center, and The Harvey M. Krueger Family Center for Nanoscience and Nanotechnology, Edmond J. Safra Campus, The Hebrew University, Jerusalem 9190401, Israel
| | - Christoph Allolio
- Institute of Chemistry, The Fritz Haber Research Center, and The Harvey M. Krueger Family Center for Nanoscience and Nanotechnology, Edmond J. Safra Campus, The Hebrew University, Jerusalem 9190401, Israel
| | - Daniel Harries
- Institute of Chemistry, The Fritz Haber Research Center, and The Harvey M. Krueger Family Center for Nanoscience and Nanotechnology, Edmond J. Safra Campus, The Hebrew University, Jerusalem 9190401, Israel
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27
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An experimentally validated approach to calculate the blood-brain barrier permeability of small molecules. Sci Rep 2019; 9:6117. [PMID: 30992465 PMCID: PMC6467875 DOI: 10.1038/s41598-019-42272-0] [Citation(s) in RCA: 26] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/20/2018] [Accepted: 03/18/2019] [Indexed: 01/31/2023] Open
Abstract
Drug development for the treatment of central nervous system (CNS) diseases is extremely challenging, in large part due to the difficulty in crossing the blood-brain barrier (BBB). Here we develop and experimentally validate a new in silico method to predict quantitatively the BBB permeability for small-molecule drugs. We show accurate prediction of solute permeabilities at physiological temperature using high-temperature unbiased atomic detail molecular dynamics simulations of spontaneous drug diffusion across BBB bilayers. These simulations provide atomic detail insights into the transport mechanisms, as well as converged kinetics and thermodynamics. The method is validated computationally against physiological temperature simulations for fast-diffusing compounds, as well as experimentally by direct determination of the compound permeabilities using a transwell assay as an in vitro BBB model. The overall agreement of the predicted values with both direct simulations at physiological temperatures and experimental data is excellent. This new tool has the potential to replace current semi-empirical in silico screening and in vitro permeability measurements in CNS drug discovery.
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28
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Gurina DL, Golubev VA. Features of Structural Solvation of Methylxanthines in Carbon Tetrachloride–Methanol Binary Mixtures: Molecular Dynamics Simulation. RUSSIAN JOURNAL OF PHYSICAL CHEMISTRY A 2019. [DOI: 10.1134/s0036024419010102] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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29
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Golubev VA. 1H NMR study of self-diffusion and molecular association of caffeine, theophylline and theobromine in the binary solvent methanol‑d4–carbon tetrachloride. J Mol Liq 2018. [DOI: 10.1016/j.molliq.2018.05.083] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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30
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Selected physicochemical and solubilization properties of pharmacopeal solutions of dry green tea leaf extract ( Ext. Camellia sinensis L. folium aqu. siccum). HERBA POLONICA 2018. [DOI: 10.2478/hepo-2018-0012] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
Abstract
Summary
Introduction: Green tea offers not only pleasant, delicate flavor, but also provides health benefits. The extract contains, among others, polyphenols responsible for antioxidant and anti-inflammatory properties. They reduce the risk of cancer and their presence exerts preventive activity against cardiovascular diseases.
Objective: Analysis of selected physicochemical and solubilizing properties of pharmacopoeial-true solutions of dry green tea extract.
Methods: The caffeine content was determined in the extract and in dry residue after solubilization by high performance liquid chromatography. The process of micellar solubilization of cholesterol granules and ketoprofen was carried out in model solutions of green tea extract.
Results: The obtained results indicate that the prepared ‘ex tempore’ leaf green tea infusion subjected to short thermal exposure will be characterized by significant solubilization abilities.
Conclusions: The outcomes of the research pointed to the possibility of developing a solid oral dosage form with titrated dry green tea extract of expected pharmacotherapeutic profile.
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31
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Román S, Ledesma B, Álvarez A, Herdes C. Towards sustainable micro-pollutants’ removal from wastewaters: caffeine solubility, self-diffusion and adsorption studies from aqueous solutions into hydrochars. Mol Phys 2018. [DOI: 10.1080/00268976.2018.1487597] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
Affiliation(s)
- S. Román
- Departamento de Física Aplicada, Universidad de Extremadura, Badajoz, Spain
| | - B. Ledesma
- Departamento de Física Aplicada, Universidad de Extremadura, Badajoz, Spain
| | - A. Álvarez
- Departamento de Física Aplicada, Universidad de Extremadura, Badajoz, Spain
| | - C. Herdes
- Department of Chemical Engineering, University of Bath, Bath, UK
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32
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García-Toral D, González-Melchor M, Rivas-Silva JF, Meneses-Juárez E, Cano-Ordaz J, H Cocoletzi G. Dopamine and Caffeine Encapsulation within Boron Nitride (14,0) Nanotubes: Classical Molecular Dynamics and First Principles Calculations. J Phys Chem B 2018; 122:5885-5896. [PMID: 29761705 DOI: 10.1021/acs.jpcb.8b00116] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Abstract
Classical molecular dynamics (MD) and density functional theory (DFT) calculations are developed to investigate the dopamine and caffeine encapsulation within boron nitride (BN) nanotubes (NT) with (14,0) chirality. Classical MD studies are done at canonical and isobaric-isothermal conditions at 298 K and 1 bar in explicit water. Results reveal that both molecules are attracted by the nanotube; however, only dopamine is able to enter the nanotube, whereas caffeine moves in its vicinity, suggesting that both species can be transported: the first by encapsulation and the second by drag. Findings are analyzed using the dielectric behavior, pair correlation functions, diffusion of the species, and energy contributions. The DFT calculations are performed according to the BLYP approach and applying the atomic base of the divided valence 6-31g(d) orbitals. The geometry optimization uses the minimum-energy criterion, accounting for the total charge neutrality and multiplicity of 1. Adsorption energies in the dopamine encapsulation indicate physisorption, which induces the highly occupied molecular orbital-lower unoccupied molecular orbital gap reduction yielding a semiconductor behavior. The charge redistribution polarizes the BNNT/dopamine and BNNT/caffeine structures. The work function decrease and the chemical potential values suggest the proper transport properties in these systems, which may allow their use in nanobiomedicine.
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Affiliation(s)
- Dolores García-Toral
- Facultad de Ingeniería Química , Benemérita Universidad Autónoma de Puebla , Av. San Claudio y 18 Sur S/N Edificio106A C.U. San Manuel , 72570 Puebla , Mexico
| | - Minerva González-Melchor
- Instituto de Física , Benemérita Universidad Autónoma de Puebla , Av. San Claudio y Blvd. 18 Sur, Col. San Manuel , 72570 Puebla , Mexico
| | - Juan F Rivas-Silva
- Instituto de Física , Benemérita Universidad Autónoma de Puebla , Av. San Claudio y Blvd. 18 Sur, Col. San Manuel , 72570 Puebla , Mexico
| | - Efraín Meneses-Juárez
- Instituto de Física , Benemérita Universidad Autónoma de Puebla , Av. San Claudio y Blvd. 18 Sur, Col. San Manuel , 72570 Puebla , Mexico
| | - José Cano-Ordaz
- Facultad de Ingeniería Química , Benemérita Universidad Autónoma de Puebla , Av. San Claudio y 18 Sur S/N Edificio106A C.U. San Manuel , 72570 Puebla , Mexico
| | - Gregorio H Cocoletzi
- Instituto de Física , Benemérita Universidad Autónoma de Puebla , Av. San Claudio y Blvd. 18 Sur, Col. San Manuel , 72570 Puebla , Mexico
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33
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Tavagnacco L, Mason PE, Neilson GW, Saboungi ML, Cesàro A, Brady JW. Molecular Dynamics and Neutron Scattering Studies of Mixed Solutions of Caffeine and Pyridine in Water. J Phys Chem B 2018; 122:5308-5315. [PMID: 29092394 DOI: 10.1021/acs.jpcb.7b07798] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Insight into the molecular interactions of homotactic and heterotactic association of caffeine and pyridine in aqueous solution is given on the basis of both experimental and simulation studies. Caffeine is about 5 times more soluble in a 3 m aqueous pyridine solution than it is in pure water (an increase from ∼0.1 m to 0.5 m). At this elevated concentration the system becomes suitable for neutron scattering study. Caffeine-pyridine interactions were studied by neutron scattering and molecular dynamics simulations, allowing a detailed characterization of the spatial and orientational structure of the solution. It was found that while pyridine-caffeine interactions are not as strong as caffeine-caffeine interactions, the pyridine-caffeine interactions still significantly disrupted caffeine-caffeine stacking. The alteration of the caffeine-caffeine stacking, occasioned by the presence of pyridine molecules in solution and the consequent formation of heterotactic interactions, leads to the experimentally detected increase in caffeine solubility.
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Affiliation(s)
- Letizia Tavagnacco
- Department of Food Science , Cornell University , Ithaca , New York 14853 , United States.,Department of Chemical and Pharmaceutical Sciences , University of Trieste , Via Giorgieri 1 , I-34127 Trieste , Italy
| | - Philip E Mason
- Institute of Organic Chemistry and Biochemistry , Academy of Sciences of the Czech Republic and Center for Biomolecules and Complex Molecular Systems , 16610 Prague 6 , Czech Republic
| | - George W Neilson
- H. H. Wills Physics Laboratory , University of Bristol , Bristol BS8 1TL , United Kingdom
| | - Marie-Louise Saboungi
- IMPMC-Université Pierre et Marie Curie and CNRS , 4 Place Jussieu , F-75252 Paris , France.,Functional Nano & Soft Materials Laboratory (FUNSOM) , Soochow University , Suzhou 215123 , China
| | - Attilio Cesàro
- Department of Chemical and Pharmaceutical Sciences , University of Trieste , Via Giorgieri 1 , I-34127 Trieste , Italy.,Elettra-Sincrotrone Trieste S.C.p.A ., Strada Statale 14 Km 163.5, Area Science Park , I-34149 Trieste , Italy
| | - John W Brady
- Department of Food Science , Cornell University , Ithaca , New York 14853 , United States
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Physico-chemical properties of aqueous drug solutions: From the basic thermodynamics to the advanced experimental and simulation results. Int J Pharm 2018; 540:65-77. [PMID: 29412151 DOI: 10.1016/j.ijpharm.2018.01.042] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/03/2017] [Revised: 01/22/2018] [Accepted: 01/22/2018] [Indexed: 11/20/2022]
Abstract
The physical chemical properties of aqueous solutions of model compounds are illustrated in relation to hydration and solubility issues by using three perspectives: thermodynamic, spectroscopic and molecular dynamics simulations. The thermodynamic survey of the fundamental backgrounds of concentration dependence and experimental solubility results show some peculiar behavior of aqueous solutions with several types of similar solutes. Secondly, the use of a variety of experimental spectroscopic devices, operating under different experimental conditions of dimension and frequency, has produced a large amount of structural and dynamic data on aqueous solutions showing the richness of the information produced, depending on where and how the experiment is carried out. Finally, the use of molecular dynamics computational work is presented to highlight how the different types of solute functional groups and surface topologies organize adjacent water molecules differently. The highly valuable contribution of computer simulation studies in providing molecular explanations for experimental deductions, either of a thermodynamic or spectroscopic nature, is shown to have changed the current knowledge of many aqueous solution processes. While this paper is intended to provide a collective view on the latest literature results, still the presentation aims at a tutorial explanation of the potentials of the three methodologies in the field of aqueous solutions of pharmaceutical molecules.
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Milovanović B, Kojić M, Petković M, Etinski M. New Insight into Uracil Stacking in Water from ab Initio Molecular Dynamics. J Chem Theory Comput 2018; 14:2621-2632. [DOI: 10.1021/acs.jctc.8b00139] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
Affiliation(s)
- Branislav Milovanović
- Faculty of Physical Chemistry, University of Belgrade, Studentski trg 12-16, 11000 Belgrade, Serbia
| | - Marko Kojić
- Faculty of Physical Chemistry, University of Belgrade, Studentski trg 12-16, 11000 Belgrade, Serbia
| | - Milena Petković
- Faculty of Physical Chemistry, University of Belgrade, Studentski trg 12-16, 11000 Belgrade, Serbia
| | - Mihajlo Etinski
- Faculty of Physical Chemistry, University of Belgrade, Studentski trg 12-16, 11000 Belgrade, Serbia
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36
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Cienfuegos N, Santos P, García A, Soares C, Lima A, Souza R. Integrated process for purification of capsaicin using aqueous two-phase systems based on ethanol. FOOD AND BIOPRODUCTS PROCESSING 2017. [DOI: 10.1016/j.fbp.2017.08.005] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
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37
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Bartl J, Palazzesi F, Parrinello M, Hommers L, Riederer P, Walitza S, Grünblatt E. The impact of methylphenidate and its enantiomers on dopamine synthesis and metabolism in vitro. Prog Neuropsychopharmacol Biol Psychiatry 2017; 79:281-288. [PMID: 28690202 DOI: 10.1016/j.pnpbp.2017.07.002] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 03/01/2017] [Revised: 06/02/2017] [Accepted: 07/03/2017] [Indexed: 12/19/2022]
Abstract
Methylphenidate (MPH), a psychostimulant, is an effective first-line treatment for the symptoms associated with Attention-Deficit/Hyperactivity Disorder (ADHD). Although most MPH formulations are composed of the racemic 1:1 mixture of the two enantiomers (d- and l-threo), converging lines of evidence indicate that d-threo MPH seems to be superior to the l-isomer. We aimed to investigate whether MPH racemic mixture or pure enantiomers influence the enzyme activity of tyrosine hydroxylase (TH), monoamine oxidase B (MAO-B), catechol-O-methyltransferase (COMT), and aldehyde dehydrogenase (ALDH) in vitro in homogenates of rat PC12 cells incubated with racemic, d- and l-threo MPH (1nM up to 100μM), or a vehicle for control. We could observe dose dependent enhancement of TH activity with d-threo MPH, probably due to its higher affinity to the enzyme, which we could confirm for d-threo versus l-threo MPH via docking and molecular dynamic simulations analysis. MAO-B enzyme activity was found to be enhanced when incubated with both d- and l-isomers but not with the racemic mixture. This conflicting result was hypothesized to be due to possible aggregation of the two enantiomers or other molecular conformations. Such a possible interaction was observed indirectly, when TH was incubated with constant d-threo MPH while increasing l-isomer (increasing total MPH concentrations). Hence, TH activity was slightly decreased with increased l-isomer. In conclusion, the current in vitro investigation points to the stereoselectivity of the investigated enzymes and pharmacological effects of MPH enantiomers.
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Affiliation(s)
- Jasmin Bartl
- Department of Child and Adolescent Psychiatry and Psychotherapy, University Hospital of Psychiatry Zurich, University of Zurich, Switzerland
| | - Ferruccio Palazzesi
- Department of Chemistry and Applied Biosciences, Eidgenössische Technische Hochschule (ETH) Zurich, 8093 Zurich, Switzerland; Facoltà di Informatica, Istituto di Scienze Computazionali, Università della Svizzera Italiana, 6900 Lugano, Switzerland
| | - Michele Parrinello
- Department of Chemistry and Applied Biosciences, Eidgenössische Technische Hochschule (ETH) Zurich, 8093 Zurich, Switzerland; Facoltà di Informatica, Istituto di Scienze Computazionali, Università della Svizzera Italiana, 6900 Lugano, Switzerland
| | - Leif Hommers
- Center of Mental Health, Department of Psychiatry, Psychosomatics and Psychotherapy, University Hospital of Wuerzburg, Wuerzburg, Germany
| | - Peter Riederer
- Center of Mental Health, Department of Psychiatry, Psychosomatics and Psychotherapy, University Hospital of Wuerzburg, Wuerzburg, Germany; Unit of Psychiatry, University of Southern Denmark, Odense, Denmark
| | - Susanne Walitza
- Department of Child and Adolescent Psychiatry and Psychotherapy, University Hospital of Psychiatry Zurich, University of Zurich, Switzerland; Center for Integrative Human Physiology, University of Zurich, Zurich, Switzerland; Neuroscience Center Zurich, University of Zurich and ETH Zurich, Switzerland
| | - Edna Grünblatt
- Department of Child and Adolescent Psychiatry and Psychotherapy, University Hospital of Psychiatry Zurich, University of Zurich, Switzerland; Center for Integrative Human Physiology, University of Zurich, Zurich, Switzerland; Neuroscience Center Zurich, University of Zurich and ETH Zurich, Switzerland.
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38
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Schnupf U, Brady JW. Water structuring above solutes with planar hydrophobic surfaces. Phys Chem Chem Phys 2017; 19:11851-11863. [PMID: 28435966 DOI: 10.1039/c7cp00179g] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
Abstract
Many important biological solutes possess not only polar and hydrogen bonding functionalities, but also weakly-hydrating, or hydrophobic, surfaces. Theories of the hydration of such surfaces predict that their solvent interactions will change from a wetting type interaction to a dewetting regime as a function of the solute size, with a gradual transition in behavior taking place around characteristic lengths of ∼1 nm. Aggregations of non-polar species over this size range will undergo a transition from being dominated by entropy to being dominated by enthalpy. These transitions can be understood in part in terms of the geometries required of the solvating water molecules. We report here a series of simulations in aqueous solution of organic molecules with planar faces of increasing size, ranging from cyclopropane to circumcircumcoronene, in order to explore the transition in behavior for such solutes as their size increases. For this series, the dewetting transition occurred gradually, converging asymptotically to a limiting separation value for first layer water molecules of around 3.3 Å, while the transition in hydrogen bonding orientational structure occurred between cyclopropane and cyclopentadene. Water immediately adjacent to the largest planar hydrophobic surfaces oriented in ways that resembled on average the structural organization of the basal planes of ice.
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Affiliation(s)
- Udo Schnupf
- Department of Chemistry and Biochemistry, Bradley University, Peoria, IL 61625, USA
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39
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Johnson NO, Light TP, MacDonald G, Zhang Y. Anion–Caffeine Interactions Studied by 13C and 1H NMR and ATR–FTIR Spectroscopy. J Phys Chem B 2017; 121:1649-1659. [DOI: 10.1021/acs.jpcb.6b12150] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Affiliation(s)
- Nicolas O. Johnson
- Department of Chemistry and
Biochemistry, James Madison University, Harrisonburg, Virginia 22807, United States
| | - Taylor P. Light
- Department of Chemistry and
Biochemistry, James Madison University, Harrisonburg, Virginia 22807, United States
| | - Gina MacDonald
- Department of Chemistry and
Biochemistry, James Madison University, Harrisonburg, Virginia 22807, United States
| | - Yanjie Zhang
- Department of Chemistry and
Biochemistry, James Madison University, Harrisonburg, Virginia 22807, United States
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40
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Zeindlhofer V, Khlan D, Bica K, Schröder C. Computational analysis of the solvation of coffee ingredients in aqueous ionic liquid mixtures. RSC Adv 2017; 7:3495-3504. [PMID: 28496974 PMCID: PMC5361174 DOI: 10.1039/c6ra24736a] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/04/2016] [Accepted: 10/29/2016] [Indexed: 12/19/2022] Open
Abstract
In this paper, we investigate the solvation of coffee ingredients including caffeine, gallic acid as representative for phenolic compounds and quercetin as representative for flavonoids in aqueous mixtures of the ionic liquid 1-ethyl-3-methylimidazolium acetate [C2mim][OAc] at various concentrations. Due to the anisotropy of the solutes we show that classical Kirkwood-Buff theory is not appropriate to study solvation effects with increasing ionic liquid content. However, excess coordination numbers as well as the mean residence time of solvent molecules at the surface of the solutes can be determined by Voronoi tessellation. Since the volume of the hydration shells is also available by this method, solvation free energies will be discussed as a function of the ionic liquid concentration to yield a physical meaningful picture of solvation for the anisotropic solutes. Hydrogen bonding capabilities of the solutes and their relevance for experimental extraction yields from spent coffee grounds are also discussed.
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Affiliation(s)
- Veronika Zeindlhofer
- University of Vienna , Faculty of Chemistry , Department of Computational Biological Chemistry , Währingerstraße 19 , 1090 Vienna , Austria . ; Tel: +43 14277 52711
| | - Diana Khlan
- Institute of Applied Synthetic Chemistry , Vienna University of Technology , Getreidemarkt 9/163 , 1060 Vienna , Austria
| | - Katharina Bica
- Institute of Applied Synthetic Chemistry , Vienna University of Technology , Getreidemarkt 9/163 , 1060 Vienna , Austria
| | - Christian Schröder
- University of Vienna , Faculty of Chemistry , Department of Computational Biological Chemistry , Währingerstraße 19 , 1090 Vienna , Austria . ; Tel: +43 14277 52711
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41
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Rogers BA, Thompson TS, Zhang Y. Hofmeister Anion Effects on Thermodynamics of Caffeine Partitioning between Aqueous and Cyclohexane Phases. J Phys Chem B 2016; 120:12596-12603. [DOI: 10.1021/acs.jpcb.6b07760] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Affiliation(s)
- Bradley A. Rogers
- Department of Chemistry and
Biochemistry, James Madison University, Harrisonburg, Virginia 22807, United States
| | - Tye S. Thompson
- Department of Chemistry and
Biochemistry, James Madison University, Harrisonburg, Virginia 22807, United States
| | - Yanjie Zhang
- Department of Chemistry and
Biochemistry, James Madison University, Harrisonburg, Virginia 22807, United States
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42
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Role of caffeine as an inhibitor in aggregation of hydrophobic molecules: A molecular dynamics simulation study. J Mol Liq 2016. [DOI: 10.1016/j.molliq.2016.10.086] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
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43
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Tavagnacco L, Gerelli Y, Cesàro A, Brady JW. Stacking and Branching in Self-Aggregation of Caffeine in Aqueous Solution: From the Supramolecular to Atomic Scale Clustering. J Phys Chem B 2016; 120:9987-96. [PMID: 27579545 DOI: 10.1021/acs.jpcb.6b06980] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The dynamical and structural properties of caffeine solutions at the solubility limit have been investigated as a function of temperature by means of MD simulations, static and dynamic light scattering, and small angle neutron scattering experiments. A clear picture unambiguously supported by both experiment and simulation emerges: caffeine self-aggregation promotes the formation of two distinct types of clusters: linear aggregates of stacked molecules, formed by 2-14 caffeine molecules depending on the thermodynamic conditions and disordered branched aggregates with a size in the range 1000-3000 Å. While the first type of association is well-known to occur under room temperature conditions for both caffeine and other purine systems, such as nucleotides, the presence of the supramolecular aggregates has not been reported previously. MD simulations indicate that branched structures are formed by caffeine molecules in a T-shaped arrangement. An increase of the solubility limit (higher temperature but also higher concentration) broadens the distribution of cluster sizes, promoting the formation of stacked aggregates composed by a larger number of caffeine molecules. Surprisingly, the effect on the branched aggregates is rather limited. Their internal structure and size do not change considerably in the range of solubility limits investigated.
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Affiliation(s)
- Letizia Tavagnacco
- Department of Food Science, Stocking Hall, Cornell University , Ithaca, New York 14853, United States.,Elettra-Sincrotrone Trieste S.C.p.A. , Strada Statale 14 Km 163.5, Area Science Park, I-34149 Trieste, Italy
| | - Yuri Gerelli
- Institut Laue-Langevin , 71, avenue des Martyrs, 38000 Grenoble, France
| | - Attilio Cesàro
- Elettra-Sincrotrone Trieste S.C.p.A. , Strada Statale 14 Km 163.5, Area Science Park, I-34149 Trieste, Italy.,Department of Chemical and Pharmaceutical Sciences, University of Trieste , Via Giorgieri 1, I-34127 Trieste, Italy
| | - John W Brady
- Department of Food Science, Stocking Hall, Cornell University , Ithaca, New York 14853, United States
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44
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Sharma B, Paul S. Action of Caffeine as an Amyloid Inhibitor in the Aggregation of Aβ16–22 Peptides. J Phys Chem B 2016; 120:9019-33. [DOI: 10.1021/acs.jpcb.6b03892] [Citation(s) in RCA: 40] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Affiliation(s)
- Bhanita Sharma
- Department of Chemistry, Indian Institute of Technology, Guwahati 781039, Assam, India
| | - Sandip Paul
- Department of Chemistry, Indian Institute of Technology, Guwahati 781039, Assam, India
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45
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Deol H, Pramanik S, Kumar M, Khan IA, Bhalla V. Supramolecular Ensemble of a TICT-AIEE Active Pyrazine Derivative and CuO NPs: A Potential Photocatalytic System for Sonogashira Couplings. ACS Catal 2016. [DOI: 10.1021/acscatal.6b00393] [Citation(s) in RCA: 50] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/03/2023]
Affiliation(s)
- Harnimarta Deol
- Department of Chemistry,
UGC Sponsored Centre for Advanced Studies-II, Guru Nanak Dev University, Amritsar 143005, Punjab, India
| | - Subhamay Pramanik
- Department of Chemistry,
UGC Sponsored Centre for Advanced Studies-II, Guru Nanak Dev University, Amritsar 143005, Punjab, India
| | - Manoj Kumar
- Department of Chemistry,
UGC Sponsored Centre for Advanced Studies-II, Guru Nanak Dev University, Amritsar 143005, Punjab, India
| | - Imran A. Khan
- Department of Chemistry,
UGC Sponsored Centre for Advanced Studies-II, Guru Nanak Dev University, Amritsar 143005, Punjab, India
| | - Vandana Bhalla
- Department of Chemistry,
UGC Sponsored Centre for Advanced Studies-II, Guru Nanak Dev University, Amritsar 143005, Punjab, India
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46
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Tavagnacco L, Di Fonzo S, D’Amico F, Masciovecchio C, Brady JW, Cesàro A. Stacking of purines in water: the role of dipolar interactions in caffeine. Phys Chem Chem Phys 2016; 18:13478-86. [DOI: 10.1039/c5cp07326j] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
Abstract
Concentration dependence of the NCE and the dephasing time show that caffeine molecules aggregate at 80 °C by planar stacking with a relevant contribution of dipole interactions.
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Affiliation(s)
- L. Tavagnacco
- Elettra-Sincrotrone Trieste S.C.p.A
- I-34149 Trieste
- Italy
- Lab. of Physical and Macromolecular Chemistry
- Department of Chemical and Pharmaceutical Sciences
| | - S. Di Fonzo
- Elettra-Sincrotrone Trieste S.C.p.A
- I-34149 Trieste
- Italy
| | - F. D’Amico
- Elettra-Sincrotrone Trieste S.C.p.A
- I-34149 Trieste
- Italy
| | | | - J. W. Brady
- Department of Food Science
- Stocking Hall
- Cornell University
- Ithaca
- USA
| | - A. Cesàro
- Elettra-Sincrotrone Trieste S.C.p.A
- I-34149 Trieste
- Italy
- Lab. of Physical and Macromolecular Chemistry
- Department of Chemical and Pharmaceutical Sciences
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47
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Shestopalova AV, Pesina DA, Kashpur VA, Khorunzhaya OV. Hydration of DNA-binding biological active compounds: EHF dielectrometry and molecular modeling results. Struct Chem 2015. [DOI: 10.1007/s11224-015-0695-4] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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48
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Hazra MK, Roy S, Bagchi B. Hydrophobic hydration driven self-assembly of curcumin in water: similarities to nucleation and growth under large metastability, and an analysis of water dynamics at heterogeneous surfaces. J Chem Phys 2015; 141:18C501. [PMID: 25399166 DOI: 10.1063/1.4895539] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022] Open
Abstract
As the beneficial effects of curcumin have often been reported to be limited to its small concentrations, we have undertaken a study to find the aggregation properties of curcumin in water by varying the number of monomers. Our molecular dynamics simulation results show that the equilibrated structure is always an aggregated state with remarkable structural rearrangements as we vary the number of curcumin monomers from 4 to 16 monomers. We find that the curcumin monomers form clusters in a very definite pattern where they tend to aggregate both in parallel and anti-parallel orientation of the phenyl rings, often seen in the formation of β-sheet in proteins. A considerable enhancement in the population of parallel alignments is observed with increasing the system size from 12 to 16 curcumin monomers. Due to the prevalence of such parallel alignment for large system size, a more closely packed cluster is formed with maximum number of hydrophobic contacts. We also follow the pathway of cluster growth, in particular the transition from the initial segregated to the final aggregated state. We find the existence of a metastable structural intermediate involving a number of intermediate-sized clusters dispersed in the solution. We have constructed a free energy landscape of aggregation where the metatsable state has been identified. The course of aggregation bears similarity to nucleation and growth in highly metastable state. The final aggregated form remains stable with the total exclusion of water from its sequestered hydrophobic core. We also investigate water structure near the cluster surface along with their orientation. We find that water molecules form a distorted tetrahedral geometry in the 1st solvation layer of the cluster, interacting rather strongly with the hydrophilic groups at the surface of the curcumin. The dynamics of such quasi-bound water molecules near the surface of curcumin cluster is considerably slower than the bulk signifying a restricted motion as often found in protein hydration layer.
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Affiliation(s)
- Milan Kumar Hazra
- Solid State and Structural Chemistry Unit, Indian Institute of Science, Bangalore 560012, India
| | - Susmita Roy
- Solid State and Structural Chemistry Unit, Indian Institute of Science, Bangalore 560012, India
| | - Biman Bagchi
- Solid State and Structural Chemistry Unit, Indian Institute of Science, Bangalore 560012, India
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49
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Prylutskyy YI, Evstigneev MP, Pashkova IS, Wyrzykowski D, Woziwodzka A, Gołuński G, Piosik J, Cherepanov VV, Ritter U. Characterization of C60 fullerene complexation with antibiotic doxorubicin. Phys Chem Chem Phys 2015; 16:23164-72. [PMID: 25251969 DOI: 10.1039/c4cp03367a] [Citation(s) in RCA: 50] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
Abstract
The aim of this paper was to provide the physico-chemical characterization of a key process leading to amplification of the antitumor effect of antibiotic Doxorubicin (Dox) in vivo and in vitro and occurring at the molecular level through complexation with C60 fullerene. A wide range of physico-chemical tools was used such as UV/Vis and NMR spectroscopies, atomic force microscopy, isothermal titration calorimetry and zeta-potential methods. The unusual thermodynamic behavior of the complexation process was reported, featuring unexpected and, to a certain extent, contradictory experimental observations. The explanation of the obtained results was proposed resulting in creation of a general view on aromatic drug binding with C60 fullerene. Based on these results some important practical outcomes for anticancer therapy were formulated.
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Affiliation(s)
- Yu I Prylutskyy
- Taras Shevchenko National University of Kyiv, Volodymyrska Str. 64, 01601 Kyiv, Ukraine
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50
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Tavagnacco L, Brady JW, Bruni F, Callear S, Ricci MA, Saboungi ML, Cesàro A. Hydration of Caffeine at High Temperature by Neutron Scattering and Simulation Studies. J Phys Chem B 2015; 119:13294-301. [DOI: 10.1021/acs.jpcb.5b09204] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- L. Tavagnacco
- Sincrotrone Trieste, Strada Statale
14 Km 163.5, Area Science Park, I-34149 Trieste, Italy
| | - J. W. Brady
- Department
of Food Science, Stocking Hall, Cornell University, Ithaca, New York 14853, United States
| | - F. Bruni
- Dipartimento
di Scienze, Sezione di Nanoscienze, Università degli Studi “Roma Tre”, Via della Vasca Navale 84, 00146 Roma, Italy
| | - S. Callear
- STFC, ISIS
Facility, Rutherford Appleton Laboratory, Didcot, Oxfordshire OX11 0QX, United Kingdom
| | - M. A. Ricci
- Dipartimento
di Scienze, Sezione di Nanoscienze, Università degli Studi “Roma Tre”, Via della Vasca Navale 84, 00146 Roma, Italy
| | - M. L. Saboungi
- Collegium
Sciences et Techniques, Université d’Orléans, Orléans, France
- IMPMC-Université Pierre et Marie Curie and CNRS, 4 Place Jussieu, F-75252 Paris- France
| | - A. Cesàro
- Sincrotrone Trieste, Strada Statale
14 Km 163.5, Area Science Park, I-34149 Trieste, Italy
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