Hydrophilicity and the viscosity of interfacial water

Studying the Collective Functional Response of a Receptor in Alchemical Ligand Binding Free Energy Simulations with Accelerated Solvation Layer Dynamics

Ligand binding free energy simulations (LB-FES) that involve sampling of protein functional conformations have been longstanding challenges in research on molecular recognition. Particularly, modeling of the conformational transition pathway and design of the heuristic biasing mechanism are severe bottlenecks for the existing enhanced configurational sampling (ECS) methods. Inspired by the key role of hydration in regulating conformational dynamics of macromolecules, this report proposes a novel ECS approach that facilitates binding-associated structural dynamics by accelerated hydration transitions in combination with the λ-exchange of free energy perturbation (FEP). Two challenging protein-ligand binding processes involving large configurational transitions of the receptor are studied, with hydration transitions at binding sites accelerated by Hamiltonian-simulated annealing of the hydration layer. Without the need for pathway analysis or ad hoc barrier flattening potential, LB-FES were performed with FEP/λ-exchange molecular dynamics simulation at a minor overhead for annealing of the hydration layer. The LB-FES studies showed that the accelerated rehydration significantly enhances the collective conformational transitions of the receptor, and convergence of binding affinity calculations is obtained at a sweet-spot simulation time scale. Alchemical LB-FES with the proposed ECS strategy is free from the effort of trial and error for the setup and realizes efficient on-the-fly sampling for the collective functional response of the receptor and bound water and therefore presents a practical approach to high-throughput screening in drug discovery.

Fabrication of High-Negatively Charged Bicelle-Mediated Supported Lipid Bilayer

Supported lipid bilayers (SLBs), two-dimensional lipid films formed on a solid-supporting substrate, serve as models for biomembranes and exhibit remarkable potential in chemistry, biology, and medicine. However, preparing SLBs with highly negatively charged contents on the negatively charged surface by overcoming electrostatic repulsion remains a challenge. Here, a creative bicelle-mediated and divalent cation-free SLB preparation method with the assistance of phosphate-buffered saline (PBS) solution was proposed, which can form the SLBs containing 50% DOPS or 30% CL on the silica surface monitored by a quartz crystal microbalance with dissipation (QCM-D). Results of molecular dynamics (MD) simulation indicate that electrostatic repulsion can be overcome by the increased number of hydrogen bonds caused by the adsorption of dihydrogen phosphate ions onto the headgroups of lipids. In addition, the negatively charged SLB formation was identified to be a three-step kinetic process, which differs from a two-step mechanism in the case of amphoteric SLB. The extra kinetic step can be attributed to the reduction in the number of intermolecular hydrogen bonds and the ordering of water molecules in the hydration layer. This investigation resolves the challenge of fabricating SLB over negatively charged surfaces and offers a fresh perspective on the SLB assembly methodology.

Multiscale Modeling of Aqueous Electric Double Layers

From the stability of colloidal suspensions to the charging of electrodes, electric double layers play a pivotal role in aqueous systems. The interactions between interfaces, water molecules, ions and other solutes making up the electrical double layer span length scales from Ångströms to micrometers and are notoriously complex. Therefore, explaining experimental observations in terms of the double layer's molecular structure has been a long-standing challenge in physical chemistry, yet recent advances in simulations techniques and computational power have led to tremendous progress. In particular, the past decades have seen the development of a multiscale theoretical framework based on the combination of quantum density functional theory, force-field based simulations and continuum theory. In this Review, we discuss these theoretical developments and make quantitative comparisons to experimental results from, among other techniques, sum-frequency generation, atomic-force microscopy, and electrokinetics. Starting from the vapor/water interface, we treat a range of qualitatively different types of surfaces, varying from soft to solid, from hydrophilic to hydrophobic, and from charged to uncharged.

Light, Water, and Melatonin: The Synergistic Regulation of Phase Separation in Dementia

The swift rise in acceptance of molecular principles defining phase separation by a broad array of scientific disciplines is shadowed by increasing discoveries linking phase separation to pathological aggregations associated with numerous neurodegenerative disorders, including Alzheimer’s disease, that contribute to dementia. Phase separation is powered by multivalent macromolecular interactions. Importantly, the release of water molecules from protein hydration shells into bulk creates entropic gains that promote phase separation and the subsequent generation of insoluble cytotoxic aggregates that drive healthy brain cells into diseased states. Higher viscosity in interfacial waters and limited hydration in interiors of biomolecular condensates facilitate phase separation. Light, water, and melatonin constitute an ancient synergy that ensures adequate protein hydration to prevent aberrant phase separation. The 670 nm visible red wavelength found in sunlight and employed in photobiomodulation reduces interfacial and mitochondrial matrix viscosity to enhance ATP production via increasing ATP synthase motor efficiency. Melatonin is a potent antioxidant that lowers viscosity to increase ATP by scavenging excess reactive oxygen species and free radicals. Reduced viscosity by light and melatonin elevates the availability of free water molecules that allow melatonin to adopt favorable conformations that enhance intrinsic features, including binding interactions with adenosine that reinforces the adenosine moiety effect of ATP responsible for preventing water removal that causes hydrophobic collapse and aggregation in phase separation. Precise recalibration of interspecies melatonin dosages that account for differences in metabolic rates and bioavailability will ensure the efficacious reinstatement of the once-powerful ancient synergy between light, water, and melatonin in a modern world.

Ultrasound Pulse Emission Spectroscopy Method to Characterize Xylem Conduits in Plant Stems

Although it is well known that plants emit acoustic pulses under drought stress, the exact origin of the waveform of these ultrasound pulses has remained elusive. Here, we present evidence for a correlation between the characteristics of the waveform of these pulses and the dimensions of xylem conduits in plants. Using a model that relates the resonant vibrations of a vessel to its dimension and viscoelasticity, we extract the xylem radii from the waveforms of ultrasound pulses and show that these are correlated and in good agreement with optical microscopy. We demonstrate the versatility of the method by applying it to shoots of ten different vascular plant species. In particular, for Hydrangea quercifolia, we further extract vessel element lengths with our model and compare them with scanning electron cryomicroscopy. The ultrasonic, noninvasive characterization of internal conduit dimensions enables a breakthrough in speed and accuracy in plant phenotyping and stress detection.

Roles of interfacial water states on advanced biomedical material design

When biomedical materials come into contact with body fluids, the first reaction that occurs on the material surface is hydration; proteins are then adsorbed and denatured on the hydrated material surface. The amount and degree of denaturation of adsorbed proteins affect subsequent cell behavior, including cell adhesion, migration, proliferation, and differentiation. Biomolecules are important for understanding the interactions and biological reactions of biomedical materials to elucidate the role of hydration in biomedical materials and their interaction partners. Analysis of the water states of hydrated materials is complicated and remains controversial; however, knowledge about interfacial water is useful for the design and development of advanced biomaterials. Herein, we summarize recent findings on the hydration of synthetic polymers, supramolecular materials, inorganic materials, proteins, and lipid membranes. Furthermore, we present recent advances in our understanding of the classification of interfacial water and advanced polymer biomaterials, based on the intermediate water concept.

Coil-to-Bridge Transitions of Self-Assembled Water Chains Observed in a Nanoscopic Meniscus

Ten downward portions in the large oscillatory force-distance curve reported earlier are analyzed to understand a nanoscale water meniscus confined between a sharp probe and a flat substrate in air. The sigmoidal shape of each portion leads to the assumption that the meniscus is made up of n independent transitions of two states: one for a coil state and the other for a bridge state. The analysis reveals that each downward portion occurs due to a coil-to-bridge transition of n self-assembled water chains whose length ranges between 197 and 383 chain units. The transition provides novel insights into water's unique properties like high surface tension and the long-range condensation distances.

Viscoelastic response of fluid trapped between two dissimilar van der Waals surfaces

Employing grand canonical Monte-Carlo and molecular dynamics simulations, the viscoelastic response of trapped fluid under molecularly thin confinement by walls having different wall-fluid interaction strengths, is investigated. With increase in slit asymmetry, given by the ratio of interaction strengths of the wall having strong wall-fluid interaction to that of the wall with weak wall-fluid interaction, a crossover in effective density of the fluid film, from rarer (R) to denser (D) than the bulk density is observed. Upon increasing asymmetry further, the dense fluid (F) layers undergo bond-orientational (S) ordering. The variation of viscoelastic relaxation time with scaled asymmetry shows a universal behavior, independent of slit width, with two distinct regimes. Below a critical value of asymmetry, the viscoelastic relaxation time is a slowly varying function of asymmetry, comparable with the structural relaxation time. Beyond the critical asymmetry, on the other hand, viscoelastic response time shows a sharp increase upon increasing asymmetry, deviating markedly from the structural relaxation time. Interestingly the critical asymmetry value is found to correlate with R to D crossover. The microscopic origin of the two-regime universal behavior of viscoelastic response time is found to stem from the fact that below critical asymmetry, the overall viscoelastic behaviour of the slit is dominated by that of the fast relaxing layer close to the weakly attracting surface, while above the critical asymmetry, the relaxation behaviour is guided by the dense fluid layer adjacent to the strongly attracting wall. In vicinity of fluid to ordering transition, the loss and storage moduli merge for low frequencies as in gel-like mechanical behaviour. The storage modulus takes over the loss modulus in the phase co-existence region even before the long ranged order sets in. Our findings bear important implications for fluid transport in hetero-structured geometry in nanotechnology.

Wafer-Scale Electroactive Nanoporous Silicon: Large and Fully Reversible Electrochemo-Mechanical Actuation in Aqueous Electrolytes

Nanoporosity in silicon results in interface-dominated mechanics, fluidics, and photonics that are often superior to the ones of the bulk material. However, their active control, for example, by electronic stimuli, is challenging due to the absence of intrinsic piezoelectricity in the base material. Here, for large-scale nanoporous silicon cantilevers wetted by aqueous electrolytes, electrosorption-induced mechanical stress generation of up to 600 kPa that is reversible and adjustable at will by potential variations of ≈1 V is shown. Laser cantilever bending experiments in combination with in operando voltammetry and step coulombmetry allow this large electro-actuation to be traced to the concerted action of 100 billions of parallel nanopores per square centimeter cross-section and determination of the capacitive charge-stress coupling parameter upon ion adsorption and desorption as well as the intimately related stress actuation dynamics for perchloric and isotonic saline solutions. A comparison with planar silicon surfaces reveals mechanistic insights on the observed electrocapillarity (Hellmann-Feynman interactions) with respect to the importance of oxide formation and wall roughness on the single-nanopore scale. The observation of robust electrochemo-mechanical actuation in a mainstream semiconductor with wafer-scale, self-organized nanoporosity opens up novel opportunities for on-chip integrated stress generation and actuorics at exceptionally low operation voltages.

A review on slip boundary conditions at the nanoscale: recent development and applications

The slip boundary condition for nanoflows is a key component of nanohydrodynamics theory, and can play a significant role in the design and fabrication of nanofluidic devices. In this review, focused on the slip boundary conditions for nanoconfined liquid flows, we firstly summarize some basic concepts about slip length including its definition and categories. Then, the effects of different interfacial properties on slip length are analyzed. On strong hydrophilic surfaces, a negative slip length exists and varies with the external driving force. In addition, depending on whether there is a true slip length, the amplitude of surface roughness has different influences on the effective slip length. The composition of surface textures, including isotropic and anisotropic textures, can also affect the effective slip length. Finally, potential applications of nanofluidics with a tunable slip length are discussed and future directions related to slip boundary conditions for nanoscale flow systems are addressed.

Interfacial, Electroviscous, and Nonlinear Dielectric Effects on Electrokinetics at Highly Charged Surfaces

The dielectric constant and the viscosity of water at the interface of hydrophilic surfaces differ from their bulk values, and it has been proposed that the deviation is caused by the strong electric field and the high ion concentration in the interfacial layer. We calculate the dependence of the dielectric constant and the viscosity of bulk electrolytes on the electric field and the salt concentration. Incorporating the concentration and field-dependent dielectric constant and viscosity in the extended Poisson–Boltzmann and Stokes equations, we calculate the electro-osmotic mobility. We compare the results to literature experimental data and explicit molecular dynamics simulations of OH-terminated surfaces and show that it is necessary to additionally include the presence of a subnanometer wide interfacial water layer, the properties of which are drastically transformed by the sheer presence of the interface. We conclude that the origin of the anomalous behavior of aqueous interfacial layers cannot be found in electrostriction or electroviscous effects caused by the interfacial electric field and ion concentration. Instead, it is primarily caused by the intrinsic ordering and orientation of the interfacial water layer.

Anomalous nanoparticle surface diffusion in LCTEM is revealed by deep learning-assisted analysis

The motion of nanoparticles near surfaces is of fundamental importance in physics, biology, and chemistry. Liquid cell transmission electron microscopy (LCTEM) is a promising technique for studying motion of nanoparticles with high spatial resolution. Yet, the lack of understanding of how the electron beam of the microscope affects the particle motion has held back advancement in using LCTEM for in situ single nanoparticle and macromolecule tracking at interfaces. Here, we experimentally studied the motion of a model system of gold nanoparticles dispersed in water and moving adjacent to the silicon nitride membrane of a commercial LC in a broad range of electron beam dose rates. We find that the nanoparticles exhibit anomalous diffusive behavior modulated by the electron beam dose rate. We characterized the anomalous diffusion of nanoparticles in LCTEM using a convolutional deep neural-network model and canonical statistical tests. The results demonstrate that the nanoparticle motion is governed by fractional Brownian motion at low dose rates, resembling diffusion in a viscoelastic medium, and continuous-time random walk at high dose rates, resembling diffusion on an energy landscape with pinning sites. Both behaviors can be explained by the presence of silanol molecular species on the surface of the silicon nitride membrane and the ionic species in solution formed by radiolysis of water in presence of the electron beam.

Viscosity and Structure of Water and Ethanol within GO Nanochannels: A Molecular Simulation Study

The behavior of liquids in two-dimensional (2-D) graphene oxide (GO) nanopores is important for developing GO-based nanoscience and nanofluidics. Herein, molecular dynamics simulation was carried out to study the equilibrium structures and shear viscosity for water and ethanol confined within 2-D GO nanochannels. It was observed that both species obviously exhibit structured features near GO surfaces. The confined viscosities are anisotropic with axial shear viscosity larger than vertical viscosity. The axial shear viscosities of water and ethanol are greatly enhanced for the 2-D GO nanochannels, wherein the viscosity features a decreased pattern with the pore width. Compared with water molecules, the confinement of GO channels has more effect on the viscosity of ethanol molecules. The confined shear viscosity can be described by combining contributions of the interfacial layer viscosity and the bulk-like viscosity. The influences of oxidation degrees and pore widths on the structure and transport properties have been systematically investigated, in which the interlayer viscosity is the critical determining factor. The confined structures and surface interaction were applied to interpret the transport properties of confined liquids. The enhanced interfacial layer viscosity can be attributed to the surface hydrogen-bonding interaction arising from the oxygen-containing functional groups.

Wettability and confinement size effects on stability of water conveying nanotubes

This study investigates the wettability and confinement size effects on vibration and stability of water conveying nanotubes. We present an accurate assessment of nanotube stability by considering the exact mechanics of the fluid that is confined in the nanotube. Information on the stability of nanotubes in relation to the fluid viscosity, the driving force of the fluid flow, the surface wettability of the nanotube, and the nanotube size is missing in the literature. For the first time, we explore the surface wettability dependence of the nanotube natural frequencies and stability. By means of hybrid continuum-molecular mechanics (HCMM), we determined water viscosity variations inside the nanotube. Nanotubes with different surface wettability varying from super-hydrophobic to super-hydrophilic nanotubes were studied. We demonstrated a multiphase structure of nanoconfined water in nanotubes. Water was seen as vapor at the interface with the nanotube, ice shell in the middle, and liquid water in the nanotube core. The average velocity of water flow in the nanotube was obtained strongly depend on the surface wettability and the confinement size. In addition, we report the natural frequencies of the nanotube as functions of the applied pressure and the nanotube size. Mode divergence and flutter instabilities were observed, and the activation of these instabilities strongly depended on the nanotube surface wettability and size. This work gives important insights into understanding the stability of nanotubes conveying fluids depending on the operating pressures and the wettability and size of confinement. We revealed that hydrophilic nanotubes are generally more stable than hydrophobic nanotubes when conveying fluids.

Nanoscale-Specific Reaction in a Precursor Film: Mixing Sodium Carbonate, Calcium Chloride, and an Organic Thiol to Produce Crystals of Calcium sulfate

The ultrathin precursor film surrounding droplets of liquid on a solid surface is used here as a confined reaction medium in order to drive a reaction that would not occur in bulk fluid. Sodium carbonate and calcium chloride mixed together in the presence of the organic thiol dithiothreitol (DTT) produced crystals of gypsum, or calcium sulfate, instead of the otherwise expected calcium carbonate. The possible sources of sulfate in the system are contaminants in the DTT or the oxidation product of the DTT sulfhydryl. The amount of gypsum produced implies that contaminants do not account for the total sulfate present in the system, suggesting that the DTT could be oxidized. The reaction quotient may be skewed in favor of this unexpected reaction by a combination of efficient removal of sulfate by precipitation and the concentration of DTT at the leading edge of the precursor film through the coffee-ring effect during a brief drying step.

Mechanisms of ice formation and propagation on superhydrophobic surfaces: A review

Icephobic surfaces, used as passive anti-icing materials, are in high demand due to the costs, damage, and loss of equipment and lives related to ice formation on outdoor surfaces. The proper design of icephobic surfaces is intertwined with the need for a profound understanding of ice formation processes and how ice propagates over a surface. Ice formation (ice nucleation) and interdroplet freezing propagation are processes that determine the onset of freezing and complete ice coverage on a surface, respectively. Evaluating the nature of these phenomena, along with their interactions with substrate and environmental factors, can offer a step toward designing surfaces having an improved icephobic performance. This review paper is organized to discuss ice nucleation and rate, preferable locations of nucleation, and favorable pathways of freezing (desublimation and condensation-freezing) on superhydrophobic surfaces. Furthermore, as the propagation of ice over a substrate plays a more deterministic role for the complete freezing coverage of a surface than that of ice formation, this review also elucidates possible mechanisms of ice propagation, theoretical backgrounds, and strategies to control this propagation using surface characteristics.

Liquid dispensing in the adhesive hairy pads of dock beetles

Many insects can climb on smooth inverted substrates using adhesive hairy pads on their legs. The hair-surface contact is often mediated by minute volumes of liquid, which form capillary bridges in the contact zones and aid in adhesion. The liquid transport to the contact zones is poorly understood. We investigated the dynamics of liquid secretion in the dock beetle Gastrophysa viridula by quantifying the volume of the deposited liquid footprints during simulated walking experiments. The footprint volume increased with pad-surface contact time and was independent of the non-contact time. Furthermore, the footprint volume decreased to zero after reaching a threshold cumulative volume (approx. 30 fl) in successive steps. This suggests a limited reservoir with low liquid influx. We modelled our results as a fluidic resistive system and estimated the hydraulic resistance of a single attachment hair of the order of MPa · s/fl. The liquid secretion in beetle hairy pads is dominated by passive suction of the liquid during the contact phase. The high calculated resistance of the secretion pathway may originate from the nanosized channels in the hair cuticle. Such nanochannels presumably mediate the transport of cuticular lipids, which are chemically similar to the adhesive liquid.

Temporally Anticorrelated Subdiffusion in Water Nanofilms on Silica Suggests Near-Surface Viscoelasticity

Single-molecule tracking was used to probe the local rheology of interfacial water. Fluorescent rhodamine molecules were tracked on silica surfaces as a function of ambient relative humidity, which controlled the thickness of condensed water nanofilms. At low humidity, the molecules exhibited confined diffusion in the vicinity of isolated adsorption sites characterized by a broad distribution of binding stiffness constants; subsequent chemical or physical surface passivation selectively eliminated stiffer binding sites. At increased humidity, molecularly thin water films condensed, permitting near-surface transport of rhodamine molecules. Motion was subdiffusive, with an anomalous exponent increasing with the nanofilm thickness. Molecular trajectories were temporally anticorrelated, ergodic, but also featured transient binding and intermittent diffusion. Statistical modeling demonstrated that this complex motion in water nanofilms had the characteristics of fractional Brownian motion combined with a continuous-time random walk. This was consistent with diffusion within viscoelastic nanofilms, suggesting persistent molecular structuring in the vicinity of the silica surface.

The effect of cold atmospheric plasma on diabetes-induced enzyme glycation, oxidative stress, and inflammation; in vitro and in vivo

Cold atmospheric plasma (CAP) is known as the versatile tool in different biological, and medical applications. In this study, we investigated the effect of cold plasma on diabetes via in vitro and in vivo assessments. We performed the in vitro assay to evaluate the impact of CAP on glycated glutathione peroxidase (GPx) through enzyme activity measurement as a function index and far- and near-UV circular dichroism (CD) and fluorescence analysis as structure indices. The result of in vitro assessment showed that the exposure of glycated GPx to plasma causes a considerable increase in enzyme activity up to 30%. Also, the evaluation of far- and near-UV CD and fluorescence analysis indicated a modification in the protein structure. According to obtained result from in vitro assessment, in vivo assay evaluated the effect of CAP on diabetic mice through analyzing of blood glucose level (BGL), advanced glycation end products (AGEs), antioxidant activity, oxidative stress biomarkers such as malondialdehyde (MDA), advanced oxidation protein products (AOPP), and oxidized low-density lipoprotein (oxLDL), and inflammation factors including tumor necrosis factor (TNF-α), interleukin-1 (IL-1), and interleukin-6 (IL-6). The result of in vivo experiment also showed a 20% increase in antioxidant activity. Also, the reduction in AGEs, oxidative stress biomarkers, and inflammatory cytokines concentrations was observed. The result of this study revealed that CAP could be useful in diabetes treatment and can be utilized as a complementary method for diabetes therapy.

How the phage T4 injection machinery works including energetics, forces, and dynamic pathway

The virus bacteriophage T4, from the family Myoviridae, employs an intriguing contractile injection machine to inject its genome into the bacterium Escherichia coli Although the atomic structure of phage T4 is largely understood, the dynamics of its injection machinery remains unknown. This study contributes a system-level model describing the nonlinear dynamics of the phage T4 injection machinery interacting with a host cell. The model employs a continuum representation of the contractile sheath using elastic constants inferred from atomistic molecular-dynamics (MD) simulations. Importantly, the sheath model is coupled to component models representing the remaining structures of the virus and the host cell. The resulting system-level model captures virus-cell interactions as well as competing energetic mechanisms that release and dissipate energy during the injection process. Simulations reveal the dynamical pathway of the injection process as a "contraction wave" that propagates along the sheath, the energy that powers the injection machinery, the forces responsible for piercing the host cell membrane, and the energy dissipation that controls the timescale of the injection process. These results from the model compare favorably with the available (but limited) experimental measurements.

The Role of Water Homeostasis in Muscle Function and Frailty: A Review

Water, the main component of the body, is distributed in the extracellular and intracellular compartments. Water exchange between these compartments is mainly governed by osmotic pressure. Extracellular water osmolarity must remain within very narrow limits to be compatible with life. Older adults lose the thirst sensation and the ability to concentrate urine, and this favours increased extracellular osmolarity (hyperosmotic stress). This situation, in turn, leads to cell dehydration, which has severe consequences for the intracellular protein structure and function and, ultimately, results in cell damage. Moreover, the fact that water determines cell volume may act as a metabolic signal, with cell swelling acting as an anabolic signal and cell shrinkage acting as a catabolic signal. Ageing also leads to a progressive loss in muscle mass and strength. Muscle strength is the main determinant of functional capacity, and, in elderly people, depends more on muscle quality than on muscle quantity (or muscle mass). Intracellular water content in lean mass has been related to muscle strength, functional capacity, and frailty risk, and has been proposed as an indicator of muscle quality and cell hydration. This review aims to assess the role of hyperosmotic stress and cell dehydration on muscle function and frailty.

Ultrahigh Water Flow Enhancement by Optimizing Nanopore Chemistry and Geometry

The high permeability of nanoporous membranes is crucial for separation processes and energy conversions, especially for the world today that is facing growing water scarcity and energy demands. Unfortunately, further improving permeability, without sacrificing the required selectivity for specific applications, is still extremely challenging. Here, we shed light on the mechanisms of extremely high water permeability of artificial nanopores with the aquaporin-inspired pore geometry and propose a simple yet practical optimization strategy by using computational research to relate nanopore chemistry and geometry to permeability performance. We demonstrated that an ultrahigh water flow enhancement, up to 7 orders of magnitude, can be achieved by optimizing the combination of chemical and geometrical parameters of bioinspired artificial nanopores. Moreover, we addressed an existing debate over the water flow enhancement spanning over 10^-1 to 10⁵, attributed to the huge differences in chemical and geometrical properties. Our work provides a guideline to the design and optimization of nanofluidic devices with excellent performance.

Fluidity and phase transitions of water in hydrophobic and hydrophilic nanotubes

We put water flow under scrutiny to report radial distributions of water viscosity within hydrophobic and hydrophilic nanotubes as functions of the water-nanotube interactions ([Formula: see text]), surface wettability (θ), and nanotube size (R) using a proposed hybrid continuum-molecular mechanics. Based on the computed viscosity data, [Formula: see text] phase diagram of the phase transitions of confined water in nanotubes is developed. It is revealed that water exhibits different multiphase structures, and the formation of one of these structures depends on [Formula: see text] R parameters. A drag of water flow at the first water layer is revealed, which is conjugate to sharp increase in the viscosity and formation of an ice phase under severe confinement (R ≤ 3.5 nm) and strong water-nanotube interaction conditions. A vapor/vapor-liquid phase is observed at hydrophobic and hydrophilic interfaces. A state of confinement is revealed at which water exhibits different multiphase structures under the same flow rate. The derived viscosity functions are used to accurately determine factors of flow enhancement/inhibition of confined water.

Flow Behaviors of Polymer Colloids and Curing Resins Affect Pore Diameters and Heights of Periodic Porous Polymer Films to Direct Their Surface and Optical Characteristics

Manipulation of both pore diameters and heights of two-dimensional periodic porous polymer films is important to extensively control their characteristics. However, except for using different sized colloid templates in replication methods, an effective method that tunes these factors has rarely been reported. We found that both parameters are controllable by adjusting the flow behaviors of polystyrene colloids and curing resin precursors during the preparation of phenolic resin and poly(dimethylsiloxane) periodic porous films by embedding their precursors into colloidal crystal monolayers. We adjust the flow behaviors by either varying film preparation temperatures (≥glass transition temperature of polystyrene) or using the precursors mixed with different amounts of solvents that renders the colloids viscous. Consequently, the pore diameters and film heights change by 36-56 and 56-84%, respectively. Such modulation results in the change in height to diameter ratios and the areal fractions of resins at air-film interfaces, thereby significantly changing the water contact angles on these surfaces and their photonic characteristics. This straightforward method does not require additional steps, differently sized colloids, or different amounts of precursors for these parameter controls.

Effect of Humidity and Water Intercalation on the Tribological Behavior of Graphene and Graphene Oxide

In this work, the effect of humidity and water intercalation on the friction and wear behavior of few-layers of graphene and graphene oxide (GO) was studied using friction force microscopy. Thickness measurements demonstrated significant water intercalation within GO affecting its surface topography (roughness and protrusions), whereas negligible water intercalation of graphene was observed. It was found that water intercalation in GO contributed to wearing of layers at a relative humidity as low as ∼30%. The influence of surface wettability and water adsorption was also studied by comparing the sliding behavior of SiO₂/GO, SiO₂/Graphene, and SiO₂/SiO₂ interfaces. Friction for the SiO₂/GO interface increased with relative humidity due to water intercalation and condensation of water. In contrast, it was observed that adsorption of water molecules lubricated the SiO_2/SiO₂ interface due to easy shearing of water on the hydrophobic surface, particularly once the adsorbed water layers had transitioned from "ice-like water" to "liquid-like water" structures. Lastly, an opposite friction trend was observed for the graphene/SiO₂ interface with water molecules failing to lubricate the interface as compared to the dry graphene/SiO₂ contact.

Scanning speed phenomenon in contact-resonance atomic force microscopy

This work presents data confirming the existence of a scan speed related phenomenon in contact-mode atomic force microscopy (AFM). Specifically, contact-resonance spectroscopy is used to interrogate this phenomenon. Above a critical scan speed, a monotonic decrease in the recorded contact-resonance frequency is observed with increasing scan speed. Proper characterization and understanding of this phenomenon is necessary to conduct accurate quantitative imaging using contact-resonance AFM, and other contact-mode AFM techniques, at higher scan speeds. A squeeze film hydrodynamic theory is proposed to explain this phenomenon, and model predictions are compared against the experimental data.

Fast water transport in graphene nanofluidic channels

Superfast water transport discovered in graphitic nanoconduits, including carbon nanotubes and graphene nanochannels, implicates crucial applications in separation processes and energy conversion. Yet lack of complete understanding at the single-conduit level limits development of new carbon nanofluidic structures and devices with desired transport properties for practical applications. Here, we show that the hydraulic resistance and slippage of single graphene nanochannels can be accurately determined using capillary flow and a novel hybrid nanochannel design without estimating the capillary pressure. Our results reveal that the slip length of graphene in the graphene nanochannels is around 16 nm, albeit with a large variation from 0 to 200 nm regardless of the channel height. We corroborate this finding with molecular dynamics simulation results, which indicate that this wide distribution of the slip length is due to the surface charge of graphene as well as the interaction between graphene and its silica substrate.

Viscosity of Water Interfaces with Hydrophobic Nanopores: Application to Water Flow in Carbon Nanotubes

The nanoconfinement of water results in changes in water properties and nontraditional water flow behaviors. The determination of the interfacial interactions between water and hydrophobic surfaces helps in understanding many of the nontraditional behaviors of nanoconfined water. In this study, an approach for the identification of the viscosity of water interfaces with hydrophobic nanopores as a function of the nanopore diameter and water-solid (nanopore) interactions is proposed. In this approach, water in a hydrophobic nanopore is represented as a double-phase water with two distinct viscosities: water interface and water core. First, the slip velocity to pressure gradient ratio of water flow in hydrophobic nanopores is obtained via molecular dynamics (MD) simulations. Then the water interface viscosity is determined via a pressure gradient-based bilayer water flow model. Moreover, the core viscosity and the effective viscosity of water flow in hydrophobic nanopores are derived as functions of the nanopore diameter and water-solid interactions. This approach is utilized to report the interface viscosity, core viscosity, and effective viscosity of water flow in carbon nanotubes (CNTs) as functions of the CNT diameter. Moreover, using the proposed approach, the transition from MD to continuum mechanics is revealed where the bulk water properties are recovered for large CNTs.

Discriminating Residue Substitutions in a Single Protein Molecule Using a Sub-nanopore

It is now possible to create, in a thin inorganic membrane, a single, sub-nanometer-diameter pore (i.e., a sub-nanopore) about the size of an amino acid residue. To explore the prospects for sequencing protein with it, measurements of the force and current were performed as two denatured histones, which differed by four amino acid residue substitutions, were impelled systematically through the sub-nanopore one at a time using an atomic force microscope. The force measurements revealed that once the denatured protein, stabilized by sodium dodecyl sulfate (SDS), translocated through the sub-nanopore, a disproportionately large force was required to pull it back. This was interpreted to mean that the SDS was cleaved from the protein during the translocation. The force measurements also exposed a dichotomy in the translocation kinetics: either the molecule slid nearly frictionlessly through the pore or it slipped-and-stuck. When it slid frictionlessly, regardless of whether the molecule was pulled N-terminus or C-terminus first through the pore, regular patterns were observed intermittently in the force and blockade current fluctuations that corresponded to the distance between stretched residues. Furthermore, the amplitude of the fluctuations in the current blockade were correlated with the occluded volume associated with the amino acid residues in the pore. Finally, a comparison of the patterns in the current fluctuations associated with the two practically identical histones supported the conclusion that a sub-nanopore was sensitive enough to discriminate amino acid substitutions in the sequence of a single protein molecule by measuring volumes of 0.1 nm³ per read.

Orders of Magnitude Reduction of Rapid Coagulation Rate with Decreasing Size of Silica Nanoparticles

The modification of the classical Smoluchowski theory for the rapid coagulation rate of colloidal particles, which takes account of the effect of the squeezing flow between colliding particles, has been widely accepted because it predicts experimental results adequately. However, it is not clear whether the modified theory, in which the coagulation rate is independent of the particle size, is applicable even to nanoparticles in solutions. In the present study, the rapid coagulation rates of silica particles in various 2 M chloride and 1 M potassium solutions were measured by using a low-angle light-scattering apparatus, and the dependence of rapid coagulation rate on the particle diameter, D_p, was investigated extensively. It was clearly shown that the rapid coagulation rate of spherical silica particles reduces by the orders of magnitude with decreasing particle size at D_p ≤ 300 nm, whereas it coincides with the value predicted by the modified theory at D_p ≥ 300 nm. A possible mechanism is proposed, and an analytical equation, which predicts the dramatic reduction in the rapid coagulation rate with decreasing particle size, is derived.

Wettability effect on nanoconfined water flow

Understanding and controlling the flow of water confined in nanopores has tremendous implications in theoretical studies and industrial applications. Here, we propose a simple model for the confined water flow based on the concept of effective slip, which is a linear sum of true slip, depending on a contact angle, and apparent slip, caused by a spatial variation of the confined water viscosity as a function of wettability as well as the nanopore dimension. Results from this model show that the flow capacity of confined water is 10^-1∼10⁷ times that calculated by the no-slip Hagen-Poiseuille equation for nanopores with various contact angles and dimensions, in agreement with the majority of 53 different study cases from the literature. This work further sheds light on a controversy over an increase or decrease in flow capacity from molecular dynamics simulations and experiments.

Thermal transport phenomena in nanoparticle suspensions

Nanoparticle suspensions in liquids have received great attention, as they may offer an approach to enhance thermophysical properties of base fluids. A good variety of applications in engineering and biomedicine has been investigated with the aim of exploiting the above potential. However, the multiscale nature of nanosuspensions raises several issues in defining a comprehensive modelling framework, incorporating relevant molecular details and much larger scale phenomena, such as particle aggregation and their dynamics. The objectives of the present topical review is to report and discuss the main heat and mass transport phenomena ruling macroscopic behaviour of nanosuspensions, arising from molecular details. Relevant experimental results are included and properly put in the context of recent observations and theoretical studies, which solved long-standing debates about thermophysical properties enhancement. Major transport phenomena are discussed and in-depth analysis is carried out for highlighting the role of geometrical (nanoparticle shape, size, aggregation, concentration), chemical (pH, surfactants, functionalization) and physical parameters (temperature, density). We finally overview several computational techniques available at different scales with the aim of drawing the attention on the need for truly multiscale predictive models. This may help the development of next-generation nanoparticle suspensions and their rational use in thermal applications.

Accurate measurement of liquid transport through nanoscale conduits

Nanoscale liquid transport governs the behaviour of a wide range of nanofluidic systems, yet remains poorly characterized and understood due to the enormous hydraulic resistance associated with the nanoconfinement and the resulting minuscule flow rates in such systems. To overcome this problem, here we present a new measurement technique based on capillary flow and a novel hybrid nanochannel design and use it to measure water transport through single 2-D hydrophilic silica nanochannels with heights down to 7 nm. Our results show that silica nanochannels exhibit increased mass flow resistance compared to the classical hydrodynamics prediction. This difference increases with decreasing channel height and reaches 45% in the case of 7 nm nanochannels. This resistance increase is attributed to the formation of a 7-angstrom-thick stagnant hydration layer on the hydrophilic surfaces. By avoiding use of any pressure and flow sensors or any theoretical estimations the hybrid nanochannel scheme enables facile and precise flow measurement through single nanochannels, nanotubes, or nanoporous media and opens the prospect for accurate characterization of both hydrophilic and hydrophobic nanofluidic systems.

Light Effect on Water Viscosity: Implication for ATP Biosynthesis

Previous work assumed that ATP synthase, the smallest known rotary motor in nature, operates at 100% efficiency. Calculations which arrive to this result assume that the water viscosity inside mitochondria is constant and corresponds to that of bulk water. In our opinion this assumption is not satisfactory for two reasons: (1) There is evidence that the water in mitochondria prevails to 100% as interfacial water. (2) Laboratory experiments which explore the properties of interfacial water suggest viscosities which exceed those of bulk water, specifically at hydrophilic interfaces. Here, we wish to suggest a physicochemical mechanism which assumes intramitochondrial water viscosity gradients and consistently explains two cellular responses: The decrease and increase in ATP synthesis in response to reactive oxygen species and non-destructive levels of near-infrared (NIR) laser light, respectively. The mechanism is derived from the results of a new experimental method, which combines the technique of nanoindentation with the modulation of interfacial water layers by laser irradiation. Results, including the elucidation of the principle of light-induced ATP production, are expected to have broad implications in all fields of medicine.

Exploration and exploitation of water in colloidal crystals

Water on solid surfaces is ubiquitously found in nature, in most cases due to mere adsorption from ambient moisture. Because porous structures have large surfaces, water may significantly affect their characteristics. This is particularly obvious in systems formed by separate particles, whose interactions are strongly influenced by small amounts of liquid. Water/solid phenomena, like adsorption, condensation, capillary forces, or interparticle cohesion, have typically been studied at relatively large scales down to the microscale, like in wet granular media. However, much less is known about how water is confined and acts at the nanoscale, for example, in the interstices of divided systems, something of utmost importance in many areas of materials science nowadays. With novel approaches, in-depth investigations as to where and how water is placed in the nanometer-sized pores of self-assembled colloidal crystals have been made, which are employed as a well-defined, versatile model system with useful optical properties. In this Progress Report, knowledge gained in the last few years about water distribution in such nanoconfinements is gathered, along with how it can be controlled and the consequences it brings about to extract new or enhance existing material functionalities. New methods developed and new capabilities of standard techniques are described, and the water interplay with the optical, chemical, and mechanical properties of the ensemble are discussed. Some lines for applicability are also highlighted and aspects to be addressed in the near future are critically summarized.

Flow enhancement of water-based nanoparticle dispersion through microscale sedimentary rocks

Understanding and controlling fluids flow at the microscale is a matter of growing scientific and technological interest. Flow enhancements of water-based nanoparticle dispersions through microscale porous media are investigated through twelve hydrophilic sedimentary rocks with pore-throat radius between 1.2 and 10 μm, which are quantitatively explained with a simple model with slip length correction for Darcy flow. Both as wetting phase, water exhibited no-slip Darcy flow in all cores; however, flow enhancement of nanoparticle dispersions can be up to 5.7 times larger than that of water, and it increases with the decreasing of pore-throat radius. The experimental data reveals characteristic slip lengths are of order 500 and 1000 nm for 3M® and HNPs-1 nanoparticles, respectively, independent of the lithology or nanoparticle concentration or shear rate. Meanwhile, the phenomenon of flow degradation is observed for HNPs-2 nanoparticles. These results explore the feasible application of using nanoparticle dispersions to control flow at the microscale.

Nanorheology by atomic force microscopy

We present an Atomic Force Microscopy (AFM) based method to investigate the rheological properties of liquids confined within a nanosize gap formed by an AFM tip apex and a solid substrate. In this method, a conventional AFM cantilever is sheared parallel to a substrate surface by means of a lock-in amplifier while it is approaching and retracting from the substrate in liquid. The normal solvation forces and lateral viscoelastic shear forces experienced by the AFM tip in liquid can be simultaneously measured as a function of the tip-substrate distance with sub-nanometer vertical resolution. A new calibration method is applied to compensate for the linear drift of the piezo transducer and substrate system, leading to a more precise determination of the tip-substrate distance. By monitoring the phase lag between the driving signal and the cantilever response in liquid, the frequency dependent viscoelastic properties of the confined liquid can also be derived. Finally, we discuss the results obtained with this technique from different liquid-solid interfaces. Namely, octamethylcyclotetrasiloxane and water on mica and highly oriented pyrolytic graphite.

Shear wave attenuation and micro-fluidics in water-saturated sand and glass beads

An improvement in the modeling of shear wave attenuation and speed in water-saturated sand and glass beads is introduced. Some dry and water-saturated materials are known to follow a constant-Q model in which the attenuation, expressed as Q(-1), is independent of frequency. The associated loss mechanism is thought to lie within the solid frame. A second loss mechanism in fluid-saturated porous materials is the viscous loss due to relative motion between pore fluid and solid frame predicted by the Biot-Stoll model. It contains a relaxation process that makes the Q(-1) change with frequency, reaching a peak at a characteristic frequency. Examination of the published measurements above 1 kHz, particularly those of Brunson (Ph.D. thesis, Oregon State University, Corvalis, 1983), shows another peak, which is explained in terms of a relaxation process associated with the squirt flow process at the grain-grain contact. In the process of deriving a model for this phenomenon, it is necessary to consider the micro-fluidic effects associated with the flow within a thin film of water confined in the gap at the grain-grain contact and the resulting increase in the effective viscosity of water. The result is an extended Biot model that is applicable over a broad band of frequencies.

Contraction-Induced Changes in Hydrogen Bonding of Muscle Hydration Water

Protein-water interaction plays a crucial role in protein dynamics and hence function. To study the chemical environment of water and proteins with high spatial resolution, synchrotron radiation-Fourier transform infrared (SR-FTIR) spectromicroscopy was used to probe skeletal muscle myofibrils. Observing the OH stretch band showed that water inside of relaxed myofibrils is extensively hydrogen-bonded with little or no free OH. In higher-resolution measurements obtained with single isolated myofibrils, the water absorption peaks were relatively higher within the center region of the sarcomere compared to those in the I-band region, implying higher hydration capacity of thick filaments compared to the thin filaments. When specimens were activated, changes in the OH stretch band showed significant dehydrogen bonding of muscle water; this was indicated by increased absorption at ∼3480 cm-1 compared to relaxed myofibrils. These contraction-induced changes in water were accompanied by splitting of the amide I (C=O) peak, implying that muscle proteins transition from α-helix to β-sheet-rich structures. Hence, muscle contraction can be characterized by a loss of order in the muscle-protein complex, accompanied by a destructuring of hydration water. The findings shed fresh light on the molecular mechanism of muscle contraction and motor protein dynamics.

Enhanced kinetics of pseudo first-order hydrolysis in liquid phase coexistent with ice

The reaction rate of the hydrolysis of fluorescein diacetate (FDA) is several times larger in the frozen state than that in the unfrozen solution of the same composition at the same temperature. The freeze concentration of reactants in the liquid phase expelled form ice crystals cannot explain the kinetic enhancement of pseudo first order reactions such as the FDA hydrolysis. However, the reaction rate increases as the freeze concentration ratio becomes larger at a constant temperature. Direct pH measurements have revealed that the basicity of the liquid phase is unchanged at any concentration ratio, suggesting that the reactivity enhancement is not caused by increased basicity. The reaction rate enhancement is clearly related to the size of the space in which the liquid phase is confined upon freezing. The ice wall itself or the water structure formed near the wall should thus be responsible for this kinetic enhancement.