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Bryant SJ, Garvey CJ, Darwish TA, Georgii R, Bryant G. Molecular interactions with bilayer membrane stacks using neutron and X-ray diffraction. Adv Colloid Interface Sci 2024; 326:103134. [PMID: 38518550 DOI: 10.1016/j.cis.2024.103134] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/29/2024] [Revised: 03/14/2024] [Accepted: 03/14/2024] [Indexed: 03/24/2024]
Abstract
Lamellar unit cell reconstruction from neutron and X-ray diffraction data provides information about the disposition and position of molecules and molecular segments with respect to the bilayer. When supplemented with the judicious use of molecular deuteration, the technique probes the molecular interactions and conformations within the bilayer membrane and the water layer which constitute the crystallographic unit cell. The perspective is model independent, and potentially, with a higher degree of resolution than is available with other techniques. In the case of neutron diffraction the measurement consists of carefully normalised diffracted intensity under conditions of contrast variation of the water layer. The subsequent Fourier reconstruction of the unit cell is made using the phase information from variation of peak intensities with contrast. Although the phase problem is not as easily solved for the corresponding X-ray measurements, an intuitive approach can often suffice. Here we discuss the two complimentary techniques as probes of scattering length density profiles of a bilayer, and how such a perspective provides information about the location and orientation of molecules within or between lipid bilayers. Within the basic paradigm of lamellar phases this method has provided, for example, detailed insights into the location and interaction of cryoprotectants and stress proteins, of the mechanisms of actions of viral proteins, antimicrobial compounds and drugs, and the underlying structure of the stratum corneum. In this paper we review these techniques and provide examples of the systems that have been examined. We finish with a future outlook on the use of these techniques to improve our understanding of the interactions of membranes with biomolecules.
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Affiliation(s)
- Saffron J Bryant
- School of Science, College of STEM, RMIT University, Melbourne, Australia
| | - Christopher J Garvey
- Heinz Maier-Leibnitz Zentrum (MLZ), Technische Universität München, Lichtenbergstraße 1, 85748 Garching, Germany
| | - Tamim A Darwish
- National Deuteration Facility, Australian Nuclear Science and Technology Organization, Locked Bag 2001, Kirrawee DC, NSW 2232, Australia; Faculty of Science and Technology, University of Canberra, ACT 2617, Australia
| | - Robert Georgii
- Heinz Maier-Leibnitz Zentrum (MLZ), Technische Universität München, Lichtenbergstraße 1, 85748 Garching, Germany
| | - Gary Bryant
- School of Science, College of STEM, RMIT University, Melbourne, Australia.
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Anesthetics and Cell-Cell Communication: Potential Ca 2+-Calmodulin Role in Gap Junction Channel Gating by Heptanol, Halothane and Isoflurane. Int J Mol Sci 2022; 23:ijms23169017. [PMID: 36012286 PMCID: PMC9409107 DOI: 10.3390/ijms23169017] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/08/2022] [Revised: 08/08/2022] [Accepted: 08/11/2022] [Indexed: 11/17/2022] Open
Abstract
Cell–cell communication via gap junction channels is known to be inhibited by the anesthetics heptanol, halothane and isoflurane; however, despite numerous studies, the mechanism of gap junction channel gating by anesthetics is still poorly understood. In the early nineties, we reported that gating by anesthetics is strongly potentiated by caffeine and theophylline and inhibited by 4-Aminopyridine. Neither Ca2+ channel blockers nor 3-isobutyl-1-methylxanthine (IBMX), forskolin, CPT-cAMP, 8Br-cGMP, adenosine, phorbol ester or H7 had significant effects on gating by anesthetics. In our publication, we concluded that neither cytosolic Ca2+i nor pHi were involved, and suggested a direct effect of anesthetics on gap junction channel proteins. However, while a direct effect cannot be excluded, based on the potentiating effect of caffeine and theophylline added to anesthetics and data published over the past three decades, we are now reconsidering our earlier interpretation and propose an alternative hypothesis that uncoupling by heptanol, halothane and isoflurane may actually result from a rise in cytosolic Ca2+ concentration ([Ca2+]i) and consequential activation of calmodulin linked to gap junction proteins.
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3
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Böhm J, Scherzer S. Signaling and transport processes related to the carnivorous lifestyle of plants living on nutrient-poor soil. PLANT PHYSIOLOGY 2021; 187:2017-2031. [PMID: 35235668 PMCID: PMC8890503 DOI: 10.1093/plphys/kiab297] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/24/2021] [Accepted: 06/04/2021] [Indexed: 05/29/2023]
Abstract
In Eukaryotes, long-distance and rapid signal transmission is required in order to be able to react fast and flexibly to external stimuli. This long-distance signal transmission cannot take place by diffusion of signal molecules from the site of perception to the target tissue, as their speed is insufficient. Therefore, for adequate stimulus transmission, plants as well as animals make use of electrical signal transmission, as this can quickly cover long distances. This update summarises the most important advances in plant electrical signal transduction with a focus on the carnivorous Venus flytrap. It highlights the different types of electrical signals, examines their underlying ion fluxes and summarises the carnivorous processes downstream of the electrical signals.
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Affiliation(s)
- Jennifer Böhm
- Institute for Molecular Plant Physiology and Biophysics, University of Würzburg, 97082 Würzburg, Germany
| | - Sönke Scherzer
- Institute for Molecular Plant Physiology and Biophysics, University of Würzburg, 97082 Würzburg, Germany
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Interaction of drugs with lipid raft membrane domains as a possible target. Drug Target Insights 2021; 14:34-47. [PMID: 33510571 PMCID: PMC7832984 DOI: 10.33393/dti.2020.2185] [Citation(s) in RCA: 22] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/17/2020] [Accepted: 11/11/2020] [Indexed: 01/23/2023] Open
Abstract
Introduction Plasma membranes are not the homogeneous bilayers of uniformly distributed lipids but the lipid complex with laterally separated lipid raft membrane domains, which provide receptor, ion channel and enzyme proteins with a platform. The aim of this article is to review the mechanistic interaction of drugs with membrane lipid rafts and address the question whether drugs induce physicochemical changes in raft-constituting and raft-surrounding membranes. Methods Literature searches of PubMed/MEDLINE and Google Scholar databases from 2000 to 2020 were conducted to include articles published in English in internationally recognized journals. Collected articles were independently reviewed by title, abstract and text for relevance. Results The literature search indicated that pharmacologically diverse drugs interact with raft model membranes and cellular membrane lipid rafts. They could physicochemically modify functional protein-localizing membrane lipid rafts and the membranes surrounding such domains, affecting the raft organizational integrity with the resultant exhibition of pharmacological activity. Raft-acting drugs were characterized as ones to decrease membrane fluidity, induce liquid-ordered phase or order plasma membranes, leading to lipid raft formation; and ones to increase membrane fluidity, induce liquid-disordered phase or reduce phase transition temperature, leading to lipid raft disruption. Conclusion Targeting lipid raft membrane domains would open a new way for drug design and development. Since angiotensin-converting enzyme 2 receptors which are a cell-specific target of and responsible for the cellular entry of novel coronavirus are localized in lipid rafts, agents that specifically disrupt the relevant rafts may be a drug against coronavirus disease 2019.
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Reyes-Figueroa AD, Karttunen M, Ruiz-Suárez JC. Cholesterol sequestration by xenon nano bubbles leads to lipid raft destabilization. SOFT MATTER 2020; 16:9655-9661. [PMID: 33078812 DOI: 10.1039/d0sm01256d] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
Combined coarse-grained (CG) and atomistic molecular dynamics (MD) simulations were performed to study the interactions of xenon with model lipid rafts consisting of 1,2-dipalmitoyl-sn-glycero-3-phosphocholine (DPPC), 1,2-dilauroyl-sn-glycero-3-phosphocholine (DLPC) and cholesterol (Chol). At a concentration of 2 Xe/lipid we observed an unexpected result: spontaneous nucleation of Xe nano bubbles which rapidly plunged into the bilayer. In this process Chol, essential for raft stabilization, was pulled out from the raft into the hydrophobic zone. When concentration was further increased (3 Xe/lipid), the bubbles increase in size and disrupted both the membrane and raft. We computed the radial distribution functions, pair-wise potentials, second virial coefficients and Schlitter entropy to scrutinize the nature of the interactions. Our findings, concurring with a recent report on the origin of general anaesthesia (M. A. Pavel, E. N. Petersen, H. Wang, R. A. Lerner and S. B. Hansen, Proc. Natl. Acad. Sci. U. S. A., 2020, 117(24), 13757-13766), suggest that the well-known anaesthetic effect of Xe could be mediated by sequestration of Chol, which, in turn, compromises the stability of rafts where specialized proteins needed to produce the nervous signal are anchored.
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Gonzalez A, Iles TL, Iaizzo PA, Bandschapp O. Impact of statin intake on malignant hyperthermia: an in vitro and in vivo swine study. BMC Anesthesiol 2020; 20:270. [PMID: 33096987 PMCID: PMC7585199 DOI: 10.1186/s12871-020-01186-5] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/09/2020] [Accepted: 10/13/2020] [Indexed: 01/24/2023] Open
Abstract
Background Statin intake is associated with muscular side effects, among which the unmasking of latent myopathies and of malignant hyperthermia (MH) susceptibility have been reported. These findings, together with experimental data in small animals, prompt speculation that statin therapy may compromise the performance of skeletal muscle during diagnostic in vitro contracture tests (IVCT). In addition, statins might reduce triggering thresholds in susceptible individuals (MHS), or exacerbate MH progression. We sought to obtain empirical data to address these questions. Methods We compared the responses of 3 different muscles from untreated or simvastatin treated MHS and non-susceptible (MHN) pigs. MHS animals were also invasively monitored for signs of impending MH during sevoflurane anesthesia. Results Muscles from statin treated MHS pigs responded with enhanced in vitro contractures to halothane, while responses to caffeine were unaltered by the treatment. Neither agent elicited contractures in muscles from statin treated MHN pigs. In vivo, end- tide pCO2, hemodynamic evolution, plasma pH, potassium and lactate concentrations consistently pointed to mild acceleration of MH development in statin-treated pigs, whereas masseter spasm and rigor faded compared to untreated MHS animals. Conclusions The diagnostic sensitivity and specificity of the IVCT remains unchanged by a short-term simvastatin treatment in MHS swine. Evidence of modest enhancement in cardiovascular and metabolic signs of MH, as well as masked pathognomonic muscle rigor observed under simvastatin therapy suggest a potentially misleading influence on the clinical presentation of MH. The findings deserve further study to include other statins and therapeutic regimes.
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Affiliation(s)
- Asensio Gonzalez
- Department for Anesthesia, Interdisciplinary Intermediate Care, Prehospital Emergency Medicine and Pain Therapy, University Hospital Basel, Spitalstrasse 21, CH-4031, Basel, Switzerland
| | - Tinen L Iles
- Department of Surgery and Integrative Biology and Physiology, Institute for Engineering in Medicine, University of Minnesota, Minneapolis, USA
| | - Paul A Iaizzo
- Department of Surgery and Integrative Biology and Physiology, Institute for Engineering in Medicine, University of Minnesota, Minneapolis, USA
| | - Oliver Bandschapp
- Department for Anesthesia, Interdisciplinary Intermediate Care, Prehospital Emergency Medicine and Pain Therapy, University Hospital Basel, Spitalstrasse 21, CH-4031, Basel, Switzerland.
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Arvayo-Zatarain JA, Favela-Rosales F, Contreras-Aburto C, Urrutia-Bañuelos E, Maldonado A. Molecular dynamics simulation study of the effect of halothane on mixed DPPC/DPPE phospholipid membranes. J Mol Model 2018; 25:4. [PMID: 30554281 DOI: 10.1007/s00894-018-3890-6] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/05/2018] [Accepted: 12/03/2018] [Indexed: 11/26/2022]
Abstract
We report results of a molecular dynamics simulation study of the effect of one general anesthetic, halothane, on some properties of mixed DPPC/DPPE phospholipid membranes. This is a suitable model for the study of simple, two-phospholipid membrane systems. From the simulation runs, we determined several membrane properties for five different molecular proportions of DPPC/DPPE. The effect of halothane on the studied membrane properties (area per lipid molecule, density of membrane, order parameter, etc.) was rather small. The distribution of halothane is not uniform through the bilayer thickness. Instead, there is a maximum of anesthetic concentration around 1.2 nm from the center of the membrane. The anesthetic molecule is located close to the phospholipid headgroups. The position of the halothane density maximum depends slightly on the DPPC/DPPE molar proportion. Snapshots taken over the plane of the membrane, as well as calculated two-dimensional radial distribution functions show that the anesthetic has no preference for either phospholipid (DPPC or DPPE). Our results indicate that this anesthetic molecule has only small effects on DPPC/DPPE mixed membranes. In addition, halothane displays no preferential location around DPPC or DPPE. This is probably due to the hydrophobic nature of halothane and to the fact that the chosen phospholipids have the same hydrophobic tails.
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Affiliation(s)
| | - Fernando Favela-Rosales
- Departamento de Investigación, Instituto Tecnológico Superior Zacatecas Occidente, Ave. Tecnológico 2000, 99102, Sombrerete, Zacatecas, Mexico
| | - Claudio Contreras-Aburto
- Facultad de Ciencias en Física y Matemáticas, Universidad Autónoma de Chiapas, Carretera Emiliano Zapata km 8, 29050, Tuxtla Gutiérrez, Chiapas, Mexico
| | - Efrain Urrutia-Bañuelos
- Departamento de Investigación en Física, Universidad de Sonora, Rosales y Luis Encinas s/n, 83000, Hermosillo, Sonora, Mexico
| | - Amir Maldonado
- Departamento de Física, Universidad de Sonora, Rosales y Luis Encinas s/n, 83000, Hermosillo, Sonora, Mexico.
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Weinrich M, Worcester DL. The actions of volatile anesthetics: a new perspective. Acta Crystallogr D Struct Biol 2018; 74:1169-1177. [PMID: 30605131 PMCID: PMC6317591 DOI: 10.1107/s2059798318004771] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/15/2018] [Accepted: 03/22/2018] [Indexed: 11/10/2022] Open
Abstract
This article reviews recent work in applying neutron and X-ray scattering towards the elucidation of the molecular mechanisms of volatile anesthetics. Experimental results on domain mixing in ternary lipid mixtures, and the influence of volatile anesthetics and hydrostatic pressure are placed in the contexts of ion-channel function and receptor trafficking at the postsynaptic density.
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Borsacchi S, Geppi M, Macchi S, Ninham BW, Fratini E, Ambrosi M, Baglioni P, Lo Nostro P. Phase transitions in hydrophobe/phospholipid mixtures: hints at connections between pheromones and anaesthetic activity. Phys Chem Chem Phys 2018; 18:15375-83. [PMID: 27210443 DOI: 10.1039/c6cp00659k] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Abstract
The phase behavior of a mixture of a typical insect pheromone (olean) and a phospholipid (DOPC)/water dispersion is extensively explored through SAXS, NMR and DSC experiments. The results mimic those obtained with anaesthetics in phospholipid/water systems. They also mimic the behavior and microstructure of ternary mixtures of a membrane mimetic, bilayer-forming double chained surfactants, oils and water. Taken together with recent models for conduction of the nervous impulse, all hint at lipid involvement and the underlying unity in mechanisms of pheromone, anaesthetic and hydrophobic drugs, where a local phase change in the lipid membrane architecture may be at least partly involved in the transmission of the signal.
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Affiliation(s)
- Silvia Borsacchi
- Istituto di Chimica dei Composti OrganoMetallici (ICCOM) del CNR, 56124 Pisa, Italy
| | - Marco Geppi
- Department of Chemistry and Industrial Chemistry, University of Pisa, 56124 Pisa, Italy
| | - Sara Macchi
- Department of Chemistry and Industrial Chemistry, University of Pisa, 56124 Pisa, Italy
| | - Barry W Ninham
- Department of Chemistry & CSGI, University of Florence, 50019 Sesto Fiorentino (Firenze), Italy. and Department of Applied Mathematics, Research School of Physical Sciences and Engineering, Australian National University, Canberra, ACT 0200, Australia
| | - Emiliano Fratini
- Department of Chemistry & CSGI, University of Florence, 50019 Sesto Fiorentino (Firenze), Italy.
| | - Moira Ambrosi
- Department of Chemistry & CSGI, University of Florence, 50019 Sesto Fiorentino (Firenze), Italy.
| | - Piero Baglioni
- Department of Chemistry & CSGI, University of Florence, 50019 Sesto Fiorentino (Firenze), Italy. and Enzo Ferroni Foundation, 50019 Sesto Fiorentino (Firenze), Italy
| | - Pierandrea Lo Nostro
- Department of Chemistry & CSGI, University of Florence, 50019 Sesto Fiorentino (Firenze), Italy. and Enzo Ferroni Foundation, 50019 Sesto Fiorentino (Firenze), Italy
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Ninham BW, Larsson K, Lo Nostro P. Two sides of the coin. Part 2. Colloid and surface science meets real biointerfaces. Colloids Surf B Biointerfaces 2017; 159:394-404. [PMID: 28822288 DOI: 10.1016/j.colsurfb.2017.07.090] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/23/2017] [Revised: 06/07/2017] [Accepted: 07/31/2017] [Indexed: 12/23/2022]
Abstract
Part 1 revisited developments in lipid and surfactant self assembly over the past 40 years [1]. New concepts emerged. Here we explore how these developments can be used to make sense of and bring order to a range of complex biological phenomena. Together with Part 1, this contribution is a fundamental revision of intuition at the boundaries of Colloid Science and Biological interfaces from a perspective of nearly 50 years. We offer new insights on a unified treatment of self assembly of lipids, surfactants and proteins in the light of developments presented in Part 1. These were in the enabling disciplines in molecular forces, hydration, oil and electrolyte specificity; and in the role of non Euclidean geometries-across the whole gammut of physical, colloid and surface chemistry, biophysics and membrane biology and medicine. It is where the early founders of the cell theory of biology and the physiologists expected advances to occur as D'Arcy Thompson predicted us 100 years ago.
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Affiliation(s)
- Barry W Ninham
- Department of Applied Mathematics, Research School of Physical Sciences and Engineering, Australian National University, Canberra, ACT 0200, Australia; Department of Chemistry "Ugo Schiff", University of Florence, 50019 Sesto Fiorentino, Firenze, Italy
| | - Kåre Larsson
- Camurus Lipid Research Foundation, Ideon Science Park, 22370 Lund, Sweden
| | - Pierandrea Lo Nostro
- Department of Chemistry "Ugo Schiff", University of Florence, 50019 Sesto Fiorentino, Firenze, Italy; Fondazione Prof. Enzo Ferroni-Onlus, 50019 Sesto Fiorentino, Firenze, Italy.
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11
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Kang L, Lubensky TC. Chiral twist drives raft formation and organization in membranes composed of rod-like particles. Proc Natl Acad Sci U S A 2017; 114:E19-E27. [PMID: 27999184 PMCID: PMC5224397 DOI: 10.1073/pnas.1613732114] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
Lipid rafts are hypothesized to facilitate protein interaction, tension regulation, and trafficking in biological membranes, but the mechanisms responsible for their formation and maintenance are not clear. Insights into many other condensed matter phenomena have come from colloidal systems, whose micron-scale particles mimic basic properties of atoms and molecules but permit dynamic visualization with single-particle resolution. Recently, experiments showed that bidisperse mixtures of filamentous viruses can self-assemble into colloidal monolayers with thermodynamically stable rafts exhibiting chiral structure and repulsive interactions. We quantitatively explain these observations by modeling the membrane particles as chiral liquid crystals. Chiral twist promotes the formation of finite-sized rafts and mediates a repulsion that distributes them evenly throughout the membrane. Although this system is composed of filamentous viruses whose aggregation is entropically driven by dextran depletants instead of phospholipids and cholesterol with prominent electrostatic interactions, colloidal and biological membranes share many of the same physical symmetries. Chiral twist can contribute to the behavior of both systems and may account for certain stereospecific effects observed in molecular membranes.
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Affiliation(s)
- Louis Kang
- Department of Physics & Astronomy, University of Pennsylvania, Philadelphia, PA 19104
| | - Tom C Lubensky
- Department of Physics & Astronomy, University of Pennsylvania, Philadelphia, PA 19104
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12
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Reigada R. Alteration of interleaflet coupling due to compounds displaying rapid translocation in lipid membranes. Sci Rep 2016; 6:32934. [PMID: 27596355 PMCID: PMC5011781 DOI: 10.1038/srep32934] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/25/2016] [Accepted: 08/17/2016] [Indexed: 12/02/2022] Open
Abstract
The spatial coincidence of lipid domains at both layers of the cell membrane is expected to play an important role in many cellular functions. Competition between the surface interleaflet tension and a line hydrophobic mismatch penalty are conjectured to determine the transversal behavior of laterally heterogeneous lipid membranes. Here, by a combination of molecular dynamics simulations, a continuum field theory and kinetic equations, I demonstrate that the presence of small, rapidly translocating molecules residing in the lipid bilayer may alter its transversal behavior by favoring the spatial coincidence of similar lipid phases.
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Affiliation(s)
- Ramon Reigada
- Department de Química Física and Institut de Química Teòrica i Computacional (IQTCUB), Universitat de Barcelona, c/ Martí i Franqués 1, Pta 4, 08028 Barcelona Spain
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Magliulo M, Manoli K, Macchia E, Palazzo G, Torsi L. Tailoring Functional Interlayers in Organic Field-Effect Transistor Biosensors. ADVANCED MATERIALS (DEERFIELD BEACH, FLA.) 2015; 27:7528-51. [PMID: 25429859 DOI: 10.1002/adma.201403477] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/31/2014] [Revised: 09/24/2014] [Indexed: 05/18/2023]
Abstract
This review aims to provide an update on the development involving dielectric/organic semiconductor (OSC) interfaces for the realization of biofunctional organic field-effect transistors (OFETs). Specific focus is given on biointerfaces and recent technological approaches where biological materials serve as interlayers in back-gated OFETs for biosensing applications. Initially, to better understand the effects produced by the presence of biomolecules deposited at the dielectric/OSC interfacial region, the tuning of the dielectric surface properties by means of self-assembled monolayers is discussed. Afterward, emphasis is given to the modification of solid-state dielectric surfaces, in particular inorganic dielectrics, with biological molecules such as peptides and proteins. Special attention is paid on how the presence of an interlayer of biomolecules and bioreceptors underneath the OSC impacts on the charge transport and sensing performance of the device. Moreover, naturally occurring materials, such as carbohydrates and DNA, used directly as bulk gating materials in OFETs are reviewed. The role of metal contact/OSC interface in the overall performance of OFET-based sensors is also discussed.
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Affiliation(s)
- Maria Magliulo
- Università degli Studi di Bari "Aldo Moro", Via Orabona, 470125, Bari, Italy
| | - Kyriaki Manoli
- Università degli Studi di Bari "Aldo Moro", Via Orabona, 470125, Bari, Italy
| | - Eleonora Macchia
- Università degli Studi di Bari "Aldo Moro", Via Orabona, 470125, Bari, Italy
- Dipartimento Interateneo di Fisica "M. Merlin", Università degli Studi di Bari "A. Moro", Via Orabona, 470125, Bari, Italy
| | - Gerardo Palazzo
- Università degli Studi di Bari "Aldo Moro", Via Orabona, 470125, Bari, Italy
| | - Luisa Torsi
- Università degli Studi di Bari "Aldo Moro", Via Orabona, 470125, Bari, Italy
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14
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Worcester DL, Weinrich M. Hydrostatic Pressure Promotes Domain Formation in Model Lipid Raft Membranes. J Phys Chem Lett 2015; 6:4417-4421. [PMID: 26538052 DOI: 10.1021/acs.jpclett.5b02134] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
Abstract
Neutron diffraction measurements demonstrate that hydrostatic pressure promotes liquid-ordered (Lo) domain formation in lipid membranes prepared as both oriented multilayers and unilamellar vesicles made of a canonical ternary lipid mixture for which demixing transitions have been extensively studied. The results demonstrate an unusually large dependence of the mixing transition on hydrostatic pressure. Additionally, data at 28 °C show that the magnitude of increase in Lo caused by 10 MPa pressure is much the same as the decrease in Lo produced by twice minimum alveolar concentrations (MAC) of general anesthetics such as halothane, nitrous oxide, and xenon. Therefore, the results may provide a plausible explanation for the reversal of general anesthesia by hydrostatic pressure.
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Affiliation(s)
- David L Worcester
- NIST Center for Neutron Research, National Institute of Standards and Technology , Gaithersburg 20899, Maryland, United States
- Department of Physiology and Biophysics, University of California , Irvine 92697, California, United States
| | - Michael Weinrich
- NIST Center for Neutron Research, National Institute of Standards and Technology , Gaithersburg 20899, Maryland, United States
- Eunice Kennedy Shriver National Center of Child Health and Human Development, National Institutes of Health , 31 Center Drive, Bethesda 20892, Maryland, United States
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15
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Foglia F, Lawrence M, Barlow D. Studies of model biological and bio-mimetic membrane structure: Reflectivity vs diffraction, a critical comparison. Curr Opin Colloid Interface Sci 2015. [DOI: 10.1016/j.cocis.2015.08.001] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
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16
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Sacchi M, Balleza D, Vena G, Puia G, Facci P, Alessandrini A. Effect of neurosteroids on a model lipid bilayer including cholesterol: An Atomic Force Microscopy study. BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES 2015; 1848:1258-67. [PMID: 25620773 DOI: 10.1016/j.bbamem.2015.01.002] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/30/2014] [Revised: 12/18/2014] [Accepted: 01/02/2015] [Indexed: 12/20/2022]
Abstract
Amphiphilic molecules which have a biological effect on specific membrane proteins, could also affect lipid bilayer properties possibly resulting in a modulation of the overall membrane behavior. In light of this consideration, it is important to study the possible effects of amphiphilic molecule of pharmacological interest on model systems which recapitulate some of the main properties of the biological plasma membranes. In this work we studied the effect of a neurosteroid, Allopregnanolone (3α,5α-tetrahydroprogesterone or Allo), on a model bilayer composed by the ternary lipid mixture DOPC/bSM/chol. We chose ternary mixtures which present, at room temperature, a phase coexistence of liquid ordered (Lo) and liquid disordered (Ld) domains and which reside near to a critical point. We found that Allo, which is able to strongly partition in the lipid bilayer, induces a marked increase in the bilayer area and modifies the relative proportion of the two phases favoring the Ld phase. We also found that the neurosteroid shifts the miscibility temperature to higher values in a way similarly to what happens when the cholesterol concentration is decreased. Interestingly, an isoform of Allo, isoAllopregnanolone (3β,5α-tetrahydroprogesterone or isoAllo), known to inhibit the effects of Allo on GABAA receptors, has an opposite effect on the bilayer properties.
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Affiliation(s)
- Mattia Sacchi
- Dipartimento di Scienze Fisiche, Matematiche e Informatiche, Via Campi 213/A, 41125 Modena, Italy; CNR - Istituto Nanoscienze, S3, Via Campi 213/A, 41125 Modena, Italy
| | - Daniel Balleza
- CNR - Istituto Nanoscienze, S3, Via Campi 213/A, 41125 Modena, Italy
| | - Giulia Vena
- Dipartimento di Scienze della Vita, Università di Modena e Reggio Emilia, Via Campi 287, Modena 287, Italy
| | - Giulia Puia
- Dipartimento di Scienze della Vita, Università di Modena e Reggio Emilia, Via Campi 287, Modena 287, Italy
| | - Paolo Facci
- CNR - Istituto di Biofisica, Via De Marini 6, 16149 Genova, Italy
| | - Andrea Alessandrini
- Dipartimento di Scienze Fisiche, Matematiche e Informatiche, Via Campi 213/A, 41125 Modena, Italy; CNR - Istituto Nanoscienze, S3, Via Campi 213/A, 41125 Modena, Italy.
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17
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Yoshida K, Takashima A, Nishio I. Effect of dibucaine hydrochloride on raft-like lipid domains in model membrane systems. MEDCHEMCOMM 2015. [DOI: 10.1039/c5md00108k] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
To clarify the biophysical and/or physicochemical mechanism of anaesthesia, we investigated the influence of dibucaine hydrochloride (DC·HCl), a local anaesthetic, on raft-like domains in ternary liposomes composed of dioleoylphosphatidylcholine (DOPC), dipalmitoylphosphatidylcholine (DPPC) and cholesterol (Chol).
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Affiliation(s)
- Kazunari Yoshida
- New Industry Creation Hatchery Center
- Tohoku University
- 6-6-10 Aoba
- Aoba-ku
- Japan
| | - Akito Takashima
- Department of Physics and Mathematics
- College of Science and Engineering
- Aoyama Gakuin University
- 5-10-1 Fuchinobe
- Sagamihara
| | - Izumi Nishio
- Department of Physics and Mathematics
- College of Science and Engineering
- Aoyama Gakuin University
- 5-10-1 Fuchinobe
- Sagamihara
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18
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Herold KF, Sanford RL, Lee W, Schultz MF, Ingólfsson HI, Andersen OS, Hemmings HC. Volatile anesthetics inhibit sodium channels without altering bulk lipid bilayer properties. J Gen Physiol 2014; 144:545-60. [PMID: 25385786 PMCID: PMC4242807 DOI: 10.1085/jgp.201411172] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/23/2014] [Accepted: 10/08/2014] [Indexed: 01/05/2023] Open
Abstract
Although general anesthetics are clinically important and widely used, their molecular mechanisms of action remain poorly understood. Volatile anesthetics such as isoflurane (ISO) are thought to alter neuronal function by depressing excitatory and facilitating inhibitory neurotransmission through direct interactions with specific protein targets, including voltage-gated sodium channels (Na(v)). Many anesthetics alter lipid bilayer properties, suggesting that ion channel function might also be altered indirectly through effects on the lipid bilayer. We compared the effects of ISO and of a series of fluorobenzene (FB) model volatile anesthetics on Na(v) function and lipid bilayer properties. We examined the effects of these agents on Na(v) in neuronal cells using whole-cell electrophysiology, and on lipid bilayer properties using a gramicidin-based fluorescence assay, which is a functional assay for detecting changes in lipid bilayer properties sensed by a bilayer-spanning ion channel. At clinically relevant concentrations (defined by the minimum alveolar concentration), both the FBs and ISO produced prepulse-dependent inhibition of Na(v) and shifted the voltage dependence of inactivation toward more hyperpolarized potentials without affecting lipid bilayer properties, as sensed by gramicidin channels. Only at supra-anesthetic (toxic) concentrations did ISO alter lipid bilayer properties. These results suggest that clinically relevant concentrations of volatile anesthetics alter Na(v) function through direct interactions with the channel protein with little, if any, contribution from changes in bulk lipid bilayer properties. Our findings further suggest that changes in lipid bilayer properties are not involved in clinical anesthesia.
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Affiliation(s)
- Karl F Herold
- Department of Anesthesiology, Department of Physiology and Biophysics, and Department of Pharmacology, Weill Cornell Medical College, New York, NY 10065
| | - R Lea Sanford
- Department of Anesthesiology, Department of Physiology and Biophysics, and Department of Pharmacology, Weill Cornell Medical College, New York, NY 10065
| | - William Lee
- Department of Anesthesiology, Department of Physiology and Biophysics, and Department of Pharmacology, Weill Cornell Medical College, New York, NY 10065
| | - Margaret F Schultz
- Department of Anesthesiology, Department of Physiology and Biophysics, and Department of Pharmacology, Weill Cornell Medical College, New York, NY 10065
| | - Helgi I Ingólfsson
- Department of Anesthesiology, Department of Physiology and Biophysics, and Department of Pharmacology, Weill Cornell Medical College, New York, NY 10065
| | - Olaf S Andersen
- Department of Anesthesiology, Department of Physiology and Biophysics, and Department of Pharmacology, Weill Cornell Medical College, New York, NY 10065
| | - Hugh C Hemmings
- Department of Anesthesiology, Department of Physiology and Biophysics, and Department of Pharmacology, Weill Cornell Medical College, New York, NY 10065 Department of Anesthesiology, Department of Physiology and Biophysics, and Department of Pharmacology, Weill Cornell Medical College, New York, NY 10065
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19
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20
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Weinrich M, Worcester DL. Xenon and other volatile anesthetics change domain structure in model lipid raft membranes. J Phys Chem B 2013; 117:16141-7. [PMID: 24299622 DOI: 10.1021/jp411261g] [Citation(s) in RCA: 37] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Abstract
Inhalation anesthetics have been in clinical use for over 160 years, but the molecular mechanisms of action continue to be investigated. Direct interactions with ion channels received much attention after it was found that anesthetics do not change the structure of homogeneous model membranes. However, it was recently found that halothane, a prototypical anesthetic, changes domain structure of a binary lipid membrane. The noble gas xenon is an excellent anesthetic and provides a pivotal test of the generality of this finding, extended to ternary lipid raft mixtures. We report that xenon and conventional anesthetics change the domain equilibrium in two canonical ternary lipid raft mixtures. These findings demonstrate a membrane-mediated mechanism whereby inhalation anesthetics can affect the lipid environment of transmembrane proteins.
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Affiliation(s)
- Michael Weinrich
- Eunice Kennedy Shriver National Institute of Child Health and Human Development , Bethesda, Maryland 20892, United States
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21
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McCarty LS, Arnot JA, Mackay D. Evaluation of critical body residue data for acute narcosis in aquatic organisms. ENVIRONMENTAL TOXICOLOGY AND CHEMISTRY 2013; 32:2301-2314. [PMID: 23720389 DOI: 10.1002/etc.2289] [Citation(s) in RCA: 30] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/14/2012] [Revised: 01/11/2013] [Accepted: 05/15/2013] [Indexed: 06/02/2023]
Abstract
The Environmental Residue Effects Database was evaluated to identify critical body residues of organic chemicals causing acute baseline neutral narcosis in aquatic organisms. Over 15 000 records for >400 chemicals were evaluated. Mean molar critical body residues in the final data set of 161 records for 29 chemicals were within published ranges but varied within and among chemicals and species (~3 orders of magnitude), and lipid normalization did not consistently decrease variability. All 29 chemicals can act as baseline neutral narcotics, but chemicals and/or their metabolites may also act by nonnarcotic modes of action. Specifically, nonnarcotic toxicity of polycyclic aromatic hydrocarbons and/or their biotransformation derivatives may be a significant source of variability. Complete testing of the narcosis-critical body residue hypothesis was confounded by data gaps for key toxicity modifying factors such as metabolite formation/toxicity, lipid content/composition, other modes of toxic action, and lack of steady-state status. Such problems impede determination of the precise, accurate toxicity estimates necessary for sound toxicological comparisons. Thus, neither the data nor the chemicals in the final data set should be considered definitive. Changes to testing designs and methods are necessary to improve data collection and critical body residue interpretation for hazard and risk assessment. Each of the toxicity metrics discussed-wet weight and lipid weight critical body residues, volume fraction in organism lipid, and chemical activity-has advantages, but all are subject to the same toxicity modifying factors.
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Affiliation(s)
- L S McCarty
- LS McCarty Scientific Research & Consulting, Newmarket, Ontario, Canada.
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22
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Raju SG, Barber AF, LeBard DN, Klein ML, Carnevale V. Exploring volatile general anesthetic binding to a closed membrane-bound bacterial voltage-gated sodium channel via computation. PLoS Comput Biol 2013; 9:e1003090. [PMID: 23785267 PMCID: PMC3681623 DOI: 10.1371/journal.pcbi.1003090] [Citation(s) in RCA: 62] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2012] [Accepted: 04/26/2013] [Indexed: 01/07/2023] Open
Abstract
Despite the clinical ubiquity of anesthesia, the molecular basis of anesthetic action is poorly understood. Amongst the many molecular targets proposed to contribute to anesthetic effects, the voltage gated sodium channels (VGSCs) should also be considered relevant, as they have been shown to be sensitive to all general anesthetics tested thus far. However, binding sites for VGSCs have not been identified. Moreover, the mechanism of inhibition is still largely unknown. The recently reported atomic structures of several members of the bacterial VGSC family offer the opportunity to shed light on the mechanism of action of anesthetics on these important ion channels. To this end, we have performed a molecular dynamics "flooding" simulation on a membrane-bound structural model of the archetypal bacterial VGSC, NaChBac in a closed pore conformation. This computation allowed us to identify binding sites and access pathways for the commonly used volatile general anesthetic, isoflurane. Three sites have been characterized with binding affinities in a physiologically relevant range. Interestingly, one of the most favorable sites is in the pore of the channel, suggesting that the binding sites of local and general anesthetics may overlap. Surprisingly, even though the activation gate of the channel is closed, and therefore the pore and the aqueous compartment at the intracellular side are disconnected, we observe binding of isoflurane in the central cavity. Several sampled association and dissociation events in the central cavity provide consistent support to the hypothesis that the "fenestrations" present in the membrane-embedded region of the channel act as the long-hypothesized hydrophobic drug access pathway.
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Affiliation(s)
- S. G. Raju
- Institute for Computational Molecular Science, College of Science and Technology, Temple University, Philadelphia, Pennsylvania, United States of America
| | - Annika F. Barber
- Department of Neuroscience, Thomas Jefferson University, Philadelphia, Pennsylvania, United States of America
| | - David N. LeBard
- Department of Chemistry, Yeshiva University, New York, New York, United States of America
| | - Michael L. Klein
- Institute for Computational Molecular Science, College of Science and Technology, Temple University, Philadelphia, Pennsylvania, United States of America
| | - Vincenzo Carnevale
- Institute for Computational Molecular Science, College of Science and Technology, Temple University, Philadelphia, Pennsylvania, United States of America
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23
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Sierra-Valdez FJ, Ruiz-Suárez JC. Noble Gases in Pure Lipid Membranes. J Phys Chem B 2013; 117:3167-72. [DOI: 10.1021/jp400367t] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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Abstract
Volatile anesthetics serve as useful probes of a conserved biological process that is essential to the proper functioning of the central nervous system. A kinetic and thermodynamic analysis of their unusual pharmacological and physiological characteristics has led to a general, predictive theory in which small molecules that adsorb to membranes modulate ion channel function by altering physical properties of membrane bilayers. A kinetic model that is both parsimonious and falsifiable has been developed to test this mechanism. This theory leads to predictions about the structure, function, origin, and evolution of synapses, the etiology of several diseases and disease symptoms affecting the brain, and the mechanism of action of several drugs that are used therapeutically. Neuronal membranes may offer an appealing drug target, given the large number of compounds that adsorb to interfaces and hence membranes.
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Affiliation(s)
- James M Sonner
- Department of Anesthesia and Perioperative Care, University of California, San Francisco, California 94143-0464, USA.
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25
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Volatile general anesthetic sensing with organic field-effect transistors integrating phospholipid membranes. Biosens Bioelectron 2013; 40:303-7. [DOI: 10.1016/j.bios.2012.07.068] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/12/2012] [Revised: 06/25/2012] [Accepted: 07/13/2012] [Indexed: 11/22/2022]
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