Solution preparation of two-dimensional covalently linked networks by polymerization of 1,3,5-Tri(4-iodophenyl)benzene on Au(111)

Molecular islands at the liquid-solid interface

Molecular islands of various shapes and sizes composed of a few tens of molecules only are formed at the liquid-solid interface, at room temperature, by an alkoxylated dehydrobenzo[12]annulene (DBA) derivative. Molecules are packed into hexagons. Scanning tunneling microscopy reveals the variety in molecular island structures and their stability. For molecular islands up to 7 hexagonal pores, all 244 possible structures are simulated and compared with experimental observations. Force field calculations give insights into the relative stability of the molecular islands and the factors contributing to it.

Steering Electron-Induced Surface Reaction via a Molecular Assembly Approach

Electrons not only serve as a "reactant" in redox reactions but also play a role in "catalyzing" some chemical processes. Despite the significance and ubiquitousness of electron-induced chemistry, many related scientific issues still await further exploration, among which is the impact of molecular assembly. In this work, microscopic insights into the vital role of molecular assembly in tweaking the electron-induced surface chemistry are unfolded by combined scanning tunneling microscopy and density functional theory studies. It is shown that the selective dissociation of a C-Cl bond in 4,4″-dichloro-1,1':3',1''-terphenyl (DCTP) on Cu(111) can be efficiently triggered by an electron injection via the STM tip into the unoccupied molecular orbital. The DCTP molecules are embedded in different assembly structures, including its self-assembly and coassemblies with Br adatoms. The energy threshold for the C-Cl bond cleavage increases as more Br adatoms stay close to the molecule, indicative of the sensitive response of the electron-induced surface reactivity of the C-Cl bond to the subtle change in the molecular assembly. Such a phenomenon is rationalized by the energy shift of the involved unoccupied molecular orbital of DCTP that is embedded in different assemblies. These findings shed new light on the tuning effect of molecular assembly on electron-induced reactions and introduce an efficient approach to precisely steer surface chemistry.

Exploring the Role of Metal in the Biointeraction of Metallacarboranes with C. elegans Embryos

Cobaltabis(dicarbollides), ferrabis(dicarbollide), and their halogenated derivatives are the most studied metallacarboranes with great medical potential. These versatile compounds and their iodinated derivatives can be used in chemotherapy, radiotherapy, particle therapy, and bioimaging when isotopes are used. These metallacarboranes have been evaluated in vitro and recently in vivo with complex animal models. Lately, these studies have been complemented using the invertebrate Caenorhabditis elegans (C. elegans), a nematode largely used in toxicology. When evaluated at the L4 stage, cobaltabis(dicarbollides), ([o-COSAN]- and [8,8'-I2 -o-COSAN]- ), exhibited a higher mean lethal dose (LD50 ) than ferrabis(dicarbollides) ([o-FESAN]- and [8,8'-I2 -o-FESAN]- ). In this work, we used the C. elegans embryos since they are a complex biological barrier with concentric layers of polysaccharides and proteins that protect them from the environment. We assessed if the metal atom changes their biointeraction with the C. elegans embryos. First, we assessed the effects on embryo development for metallacarboranes and their di-iodinated derivatives. We observed changes in color and in their surface structure. An exhaustive physicochemical characterization was performed to understand better this interaction, revealing a stronger interaction of ferrabis(dicarbollide) compounds with C. elegans embryos than the cobaltabis(dicarbollide) molecules. Unveiling the biological interaction of these compounds is of great interest for their future biomedical applications.

On-surface synthesis of ballbot-type N-heterocyclic carbene polymers

N-Heterocyclic carbenes (NHCs) are established ligands for metal complexes and surfaces. Here we go beyond monomeric NHCs and report on the synthesis of NHC polymers on gold surfaces, consisting of ballbot-type repeating units bound to single Au adatoms. We designed, synthesized and deposited precursors containing different halogens on gold surfaces under ultrahigh vacuum. Conformational, electronic and charge transport properties were assessed by combining low-temperature scanning tunneling microscopy, non-contact atomic force microscopy, X-ray photoelectron spectroscopy, first-principles calculations and reactive force field simulations. The confirmed ballbot-type nature of the NHCs explains the high surface mobility of the incommensurate NHC polymers, which is prerequisite for their desired spatial alignment. The delicate balance between mobility and polymerization rate allows essential parameters for controlling polymer directionality to be derived. These polymers open up new opportunities in the fields of nanoelectronics, surface functionalization and catalysis.

On-Surface Chemistry on Low-Reactive Surfaces

Zero-dimensional (0D), mono-dimensional (1D), or two-dimensional (2D) nanostructures with well-defined properties fabricated directly on surfaces are of growing interest. The fabrication of covalently bound nanostructures on non-metallic surfaces is very promising in terms of applications, but the lack of surface assistance during their synthesis is still a challenge to achieving the fabrication of large-scale and defect-free nanostructures. We discuss the state-of-the-art approaches recently developed in order to provide covalently bounded nanoarchitectures on passivated metallic surfaces, semiconductors, and insulators.

Monatomic Iodine Dielectric Layer for Multimodal Optical Spectroscopy of Dye Molecules on Metal Surfaces

Fluorescence and Raman scattering spectroscopies have been used in various research fields such as chemistry, electrochemistry, and biochemistry because they can easily obtain detailed information about molecules at interfaces with visible light. In particular, multimodal fluorescence and Raman scattering spectroscopy have recently attracted significant attention, which enables us to distinguish chemical species and their electronic states that are important for expressing various functions. However, a special strategy is required to perform simultaneous measurements because the cross sections of fluorescence and Raman scattering differ by as much as ∼10¹⁴. In this study, we propose a method for the simultaneous measurement of dye molecules on a metal surface using a monatomic layer of iodine as the dielectric layer. The method is based on adequately quenching the photoexcited state of the molecules near the metal surface to weaken the fluorescence intensity and using the resonance effect to increase the Raman signal. We have validated this concept by experiments with insulating layers of different thicknesses and dye molecules of different chemical structures. The proposed multimodal strategy paves the way for various applications such as catalytic chemistry and electrochemistry, where the adsorption structure and electronic states of molecular species near the metal surface determine functionalities.

Carbon-Carbon Coupling on Inert Surfaces by Deposition of En Route Generated Aryl Radicals

To facilitate C-C coupling in on-surface synthesis on inert surfaces, we devised a radical deposition source (RDS) for the direct deposition of aryl radicals onto arbitrary substrates. Its core piece is a heated reactive drift tube through which halogenated precursors are deposited and en route converted into radicals. For the proof of concept we study 4,4''-diiodo-p-terphenyl (DITP) precursors on iodine-passivated metal surfaces. Deposition with the RDS at room temperature results in highly regular structures comprised of mostly monomeric (terphenyl) or dimeric (sexiphenyl) biradicals. Mild heating activates progressive C-C coupling into more extended molecular wires. These structures are distinctly different from the self-assemblies observed upon conventional deposition of intact DITP. Direct deposition of radicals renders substrate reactivity unnecessary, thereby paving the road for synthesis on application-relevant inert surfaces.

Self-assembly of supramolecular nanotubes/microtubes from 3,5-dimethyl-4-iodopyrazole for plasmonic nanoparticle organization

Hierarchical super-architectures from small molecule self-assembly have interesting properties and play an indispensable role in many fields. In most cases, a self-assembly process refers to multiple intermolecular interactions among intricately designed building blocks. Here, a supramolecular assembly with a tubular morphology with dimensions ranging from nanometers to micrometers was prepared through self-assembly of 3,5-dimethyl-4-iodopyrazole (DMIP), a molecule with an unprecedented simple structure. As predicted by density functional theory (DFT) calculations, the hydrogen bond and halogen bond interaction energy between DMIP molecules can be up to 32.81 kJ mol-1, which effectively drives DMIP molecules to assemble into fibrils, sheets, and finally, tubular architectures. Intriguingly, the formed tubular structure can be easily removed by heating at 100 °C, enabling the material to function as a disposable template to guide linear organization of nanostructures. As a proof of concept, ordered Au or Ag nanochains with diameters ranging from 18 to 120 nm were facilely prepared in high yield.

Aryl Radical Geometry Determines Nanographene Formation on Au(111)

The Ullmann coupling has been used extensively as a synthetic tool for the formation of C-C bonds on surfaces. Thus far, most syntheses made use of aryl bromides or aryl iodides. We investigated the applicability of an aryl chloride in the bottom-up assembly of graphene nanoribbons. Specifically, the reactions of 10,10'-dichloro-9,9'-bianthryl (DCBA) on Au(111) were studied. Using atomic resolution non-contact AFM, the structure of various coupling products and intermediates were resolved, allowing us to reveal the important role of the geometry of the intermediate aryl radicals in the formation mechanism. For the aryl chloride, cyclodehydrogenation occurs before dehalogenation and polymerization. Due to their geometry, the planar bisanthene radicals display a different coupling behavior compared to the staggered bianthryl radicals formed when aryl bromides are used. This results in oligo- and polybisanthenes with predominantly fluoranthene-type connections.

Synthesis of Graphene-like Films by Electrochemical Reduction of Polyhalogenated Aromatic Compounds and their Electrochemical Capacitor Applications

Graphene is a promising two-dimensional nanomaterial for many applications due to its exciting properties. In the past decade, a variety of techniques-each with its own set of advantages and disadvantages-have been developed to prepare graphene, and there are ongoing efforts to improve these techniques and to reveal new approaches. Here, we describe a simple and low-cost process for the bottom-up synthesis of graphene-like films. This new methodology involves a two-step procedure: (i) formation of polyaromatic ring structures by the repeated covalent coupling of aryl radicals generated from electrochemical reduction of polyhalogenated aromatic compounds in aprotic solvent, and (ii) production of carbon networks by heating of polyaromatic surface films. Accordingly, polymeric films were prepared on the electrodes by electrochemical reduction of polyhalogenated compounds such as hexafluorobenzene (HFB), hexachlorobenzene (HCB), and hexabromobenzene (HBB), and then polymer films were annealed at 400 °C for 30 min. The structure and surface characteristics of electrodeposited carbon films under self- and thermal-annealing conditions were studied by spectroscopic and morphological techniques. Also, the capacitance performance of the films was evaluated by means of cyclic voltammetry, galvanostatic charge-discharge, and electrochemical impedance spectroscopy. Results indicate that graphene-like carbon films can be achieved by use of the electrochemical approach under mild conditions without expensive equipment, and also that these carbon materials are very promising for low-cost energy-storage devices.

Low Tunneling Decay of Iodine-Terminated Alkane Single-Molecule Junctions

One key issue for the development of molecular electronic devices is to understand the electron transport of single-molecule junctions. In this work, we explore the electron transport of iodine-terminated alkane single molecular junctions using the scanning tunneling microscope-based break junction approach. The result shows that the conductance decreases exponentially with the increase of molecular length with a decay constant β_N = 0.5 per -CH₂ (or 4 nm^-1). Importantly, the tunneling decay of those molecular junctions is much lower than that of alkane molecules with thiol, amine, and carboxylic acid as the anchoring groups and even comparable to that of the conjugated oligophenyl molecules. The low tunneling decay is attributed to the small barrier height between iodine-terminated alkane molecule and Au, which is well supported by DFT calculations. The work suggests that the tunneling decay can be effectively tuned by the anchoring group, which may guide the manufacturing of molecular wires.

Reversibility and intermediate steps as key tools for the growth of extended ordered polymers via on-surface synthesis

Surface-confined polymerization is a bottom-up strategy to create one- and two-dimensional covalent organic nanostructures with a π-conjugated backbone, which are suitable to be employed in real-life electronic devices, due to their high mechanical resistance and electronic charge transport efficiency. This strategy makes it possible to change the properties of the final nanostructures by a careful choice of the monomer architecture (i.e. of its constituent atoms and their spatial arrangement). Several chemical reactions have been proven to form low-dimensional polymers on surfaces, exploiting a variety of precursors in combination with metal (e.g. Cu, Ag, Au) and insulating (e.g. NaCl, CaCO₃) surfaces. One of the main challenges of such an approach is to obtain nanostructures with long-range order, to boost the conductance performances of these materials. Most of the exploited chemical reactions use irreversible coupling between the monomers and, as a consequence, the resulting structures often suffer from poor order and high defect density. This review focuses on the state-of-the-art surface-confined polymerization reactions, with particular attention paid to reversible coupling pathways and irreversible processes including intermediate states, which are key aspects to control to increase the order of the final nanostructure.

Reversible intercalation of iodine monolayers between on-surface synthesised covalent polyphenylene networks and Au(111)

We report on post-synthetic decoupling of covalent polyphenylene networks from Au(111) by intercalation of a chemisorbed iodine monolayer. The covalent networks were synthesised by on-surface Ullmann polymerization of 1,3-bis(p-bromophenyl)-5-(p-iodophenyl)benzene precursors on Au(111) under ultra-high vacuum conditions. The present study relates to previous work, where successful detachment was demonstrated on Ag(111) by a combination of microscopic and spectroscopic techniques. On the more reactive Ag(111) surfaces, intercalation was readily accomplished by exposing the samples to iodine vapour at room temperature. On more noble Au(111), however, STM, XPS and NEXAFS consistently indicate that the same protocol merely results in co-adsorption of iodine on uncovered surface areas, whereas the covalent networks remain adsorbed on the metal. Yet, performing the iodine exposure at elevated surface temperatures similarly results in detachment of the organic networks via intercalation of an iodine monolayer also on Au(111) as evidenced by characteristic changes in STM. In addition, owing to the high thermal stability of the covalent networks and the comparatively low iodine desorption temperature, the reversibility of the process is demonstrated: sample annealing at 400 °C results in complete desorption of the iodine monolayer, whereby the covalent networks re-adsorb directly on Au(111).

Surface-assisted Ullmann coupling

Surface-assisted Ullmann coupling is both drosophila and workhorse of on-surface synthesis. The fabrication of novel covalent low-dimensional organic nanostructures is accompanied by fundamental studies of surface chemistry.

On-Surface Synthesis of Two-Dimensional Covalent Organic Structures versus Halogen-Bonded Self-Assembly: Competing Formation of Organic Nanoarchitectures

The competition between the on-surface synthesis of covalent nanoarchitectures and the self-assembly of star-shaped 1,3,5-Tris(4-iodophenyl)benzene molecules on Au(111) in vacuum is investigated using scanning tunneling microscopy above room temperature. The molecules form covalent polygonal nanoachitectures at the gold surface step edges and at the elbows of the gold reconstruction at low coverage. With coverage increasing two-dimensional halogen-bonded structures appear and grow on the surface terraces. Two different halogen-bonded nanoarchitectures are coexisting on the surface and hybrid covalent-halogen bonded structures are locally observed. At high coverage covalent nanoarchitectures are squeezed at the domain boundary of the halogen-bonded structures. The competitive growth between the covalent and halogen-bonded nanoarchitectures leads to formation of a two-layer film above one monolayer deposition. For this coverage, the covalent nanoarchitectures are propelled on top of the halogen-bonded first layer. These observations open up new opportunities for decoupling covalent nanoarchitectures from catalytically active and metal surfaces in vacuum.

Organisation and ordering of 1D porphyrin polymers synthesised by on-surface Glaser coupling

One-dimensional porphyrin polymer chains formed via on-surface Glaser coupling exhibit ordering and conformational flexibility.

A computational study of bulk porous two-dimensional polymers related to graphyne

We use density functional theory methods with periodic boundary conditions to investigate the stacking arrangements of the bulk 2D polymers multilayer porous graphyne, the analog in which the triple bonds are substituted by double bonds and the related carbon allotrope multilayer graphyne.

1,3-Diiodobenzene on Cu(111)--an exceptional case of on-surface Ullmann coupling

Ullmann coupling of 1,3-diiodobenzene is studied on Cu(111) surfaces in ultra-high vacuum (UHV). In situ Scanning Tunneling Microscopy (STM) at room temperature revealed an unexpected ordered arrangement of highly uniform reaction products adsorbed atop a closed iodine monolayer.

On-surface Ullmann polymerization via intermediate organometallic networks on Ag(111)

The role of organometallic intermediates during on-surface polymerization via Ullmann coupling was studied on Ag(111). The polymerization progress was monitored by X-ray photoelectron spectroscopy (XPS). Scanning Tunneling Microscopy (STM) was used to characterize organometallic and covalent networks and to identify the temperature regimes for organometallic and covalent bond formation.

Surface-confined 2D polymerization of a brominated copper-tetraphenylporphyrin on Au(111)

A coupling-limited approach for the Ullmann reaction-like on-surface synthesis of a two-dimensional covalent organic network starting from a halogenated metallo-porphyrin is demonstrated. Copper-octabromo-tetraphenylporphyrin molecules can diffuse and self-assemble when adsorbed on the inert Au(111) surface. Splitting-off of bromine atoms bonded at the macrocyclic core of the porphyrin starts at room temperature after the deposition and is monitored by X-ray photoelectron spectroscopy for different annealing steps. Direct coupling between the reactive carbon sites of the molecules is, however, hindered by the molecular shape. This leads initially to an ordered non-covalently interconnected supramolecular structure. Further heating to 300 °C and an additional hydrogen dissociation step is required to link the molecular macrocycles via a phenyl group and form large ordered polymeric networks. This approach leads to a close-packed covalently bonded network of overall good quality. The structures are characterized using scanning tunneling microscopy. Different kinds of lattice defects and, furthermore, the impact of polymerization on the HOMO-LUMO gap are discussed. Density functional theory calculations corroborate the interpretations and give further insight into the adsorption of the debrominated molecule on the surface and the geometry and coupling reaction of the polymeric structure.

Two-dimensional soft nanomaterials: a fascinating world of materials

The discovery of graphene has triggered great interest in two-dimensional (2D) nanomaterials for scientists in chemistry, physics, materials science, and related areas. In the family of newly developed 2D nanostructured materials, 2D soft nanomaterials, including graphene, Bx Cy Nz nanosheets, 2D polymers, covalent organic frameworks (COFs), and 2D supramolecular organic nanostructures, possess great advantages in light-weight, structural control and flexibility, diversity of fabrication approaches, and so on. These merits offer 2D soft nanomaterials a wide range of potential applications, such as in optoelectronics, membranes, energy storage and conversion, catalysis, sensing, biotechnology, etc. This review article provides an overview of the development of 2D soft nanomaterials, with special highlights on the basic concepts, molecular design principles, and primary synthesis approaches in the context.

On-surface Ullmann coupling: the influence of kinetic reaction parameters on the morphology and quality of covalent networks

On-surface Ullmann coupling is a versatile and appropriate approach for the bottom-up fabrication of covalent organic nanostructures. In two-dimensional networks, however, the kinetically controlled and irreversible coupling leads to high defect densities and a lack of long-range order. To derive general guidelines for optimizing reaction parameters, the structural quality of 2D porous covalent networks was evaluated for different preparation protocols. For this purpose, polymerization of an iodine- and bromine-functionalized precursor was studied on Au(111) by scanning tunneling microscopy under ultrahigh vacuum conditions. By taking advantage of the vastly different temperature thresholds for C-Br and C-I cleavage, two different polymerization routes were compared - hierarchical and direct polymerization. The structural quality of the covalent networks was evaluated for different reaction parameters, such as surface temperatures, heating rates, and deposition rates by statistical analysis of STM data. Experimental results are compared to Monte Carlo simulations.

Fullerenes as adhesive layers for mechanical peeling of metallic, molecular and polymer thin films

We show that thin films of C60 with a thickness ranging from 10 to 100 nm can promote adhesion between a Au thin film deposited on mica and a solution-deposited layer of the elastomer polymethyldisolaxane (PDMS). This molecular adhesion facilitates the removal of the gold film from the mica support by peeling and provides a new approach to template stripping which avoids the use of conventional adhesive layers. The fullerene adhesion layers may also be used to remove organic monolayers and thin films as well as two-dimensional polymers which are pre-formed on the gold surface and have monolayer thickness. Following the removal from the mica support the monolayers may be isolated and transferred to a dielectric surface by etching of the gold thin film, mechanical transfer and removal of the fullerene layer by annealing/dissolution. The use of this molecular adhesive layer provides a new route to transfer polymeric films from metal substrates to other surfaces as we demonstrate for an assembly of covalently-coupled porphyrins.