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Fukuhara A, Sato M, Ogawa H, Sato T, Sellers W, Ishiguro A. Rethinking the four-wing problem in plesiosaur swimming using bio-inspired decentralized control. Sci Rep 2024; 14:25333. [PMID: 39468038 PMCID: PMC11519978 DOI: 10.1038/s41598-024-55805-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/29/2023] [Accepted: 02/27/2024] [Indexed: 10/30/2024] Open
Abstract
A locomotor system that can function across different environmental conditions and produce a range of performances is one of the most critical abilities needed for extant and extinct animals in order to survive and maximise their competitive fitness. Recent engineering-inspired paleontological studies have reconstructed feasible locomotor patterns in extinct animals. However, it is still challenging to describe how extinct animals successfully adjust their locomotor patterns to new situations (e.g., changes in locomotor speed and morphology). In this study, we develop a novel reconstruction method based on a bio-inspired control system. We focus on plesiosaurs, an extinct aquatic reptile group which has two pairs of flipper-shaped limbs, and demonstrate that a highly optimised, flexible locomotor pattern for all four flippers can be reconstructed based on a decentralized control scheme formulated from extant animals' locomotion. The results of our robotic experiments show that a simple, local sensory feedback mechanism allows the plesiosaur-like robot to exploit the fluid flow between the flippers and generate efficient swimming patterns in response to changes in locomotor conditions. Our new method provides further evidence how decentralized control systems can produce a pathway between extinct and extant animals in order to understand the how extinct animals moved and how these movement patterns may have evolved.
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Affiliation(s)
- Akira Fukuhara
- Research Institute of Electrical Communication, Tohoku University, Sendai, 987-0833, Japan.
| | - Mitsutoshi Sato
- Research Institute of Electrical Communication, Tohoku University, Sendai, 987-0833, Japan
- Graduate School of Engineering, Tohoku University, Sendai, 987-8579, Japan
| | - Hisayuki Ogawa
- Research Institute of Electrical Communication, Tohoku University, Sendai, 987-0833, Japan
- Graduate School of Engineering, Tohoku University, Sendai, 987-8579, Japan
| | - Tamaki Sato
- Department of Biological Sciences, Kanagawa University, Kanagawa, 221-8686, Japan
| | - William Sellers
- Department of Earth and Environmental Sciences, The University of Manchester, Manchester, M13 9PT, UK
| | - Akio Ishiguro
- Research Institute of Electrical Communication, Tohoku University, Sendai, 987-0833, Japan
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2
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Bishop PJ, Pierce SE. Late acquisition of erect hindlimb posture and function in the forerunners of therian mammals. SCIENCE ADVANCES 2024; 10:eadr2722. [PMID: 39454012 PMCID: PMC11506245 DOI: 10.1126/sciadv.adr2722] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/24/2024] [Accepted: 09/20/2024] [Indexed: 10/27/2024]
Abstract
The evolutionary transition from early synapsids to therian mammals involved profound reorganization in locomotor anatomy and function, centered around a shift from "sprawled" to "erect" limb postures. When and how this functional shift was accomplished has remained difficult to decipher from the fossil record alone. Through biomechanical modeling of hindlimb force-generating performance in eight exemplar fossil synapsids, we demonstrate that the erect locomotor regime typifying modern therians did not evolve until just before crown Theria. Modeling also identifies a transient phase of increased performance in therapsids and early cynodonts, before crown mammals. Further, quantifying the global actions of major hip muscle groups indicates a protracted juxtaposition of functional redeployment and conservatism, highlighting the intricate interplay between anatomical reorganization and function across postural transitions. We infer a complex history of synapsid locomotor evolution and suggest that major evolutionary transitions between contrasting locomotor behaviors may follow highly nonlinear trajectories.
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Affiliation(s)
- Peter J. Bishop
- Museum of Comparative Zoology and Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA, USA
- Geosciences Program, Queensland Museum, Brisbane, Queensland, Australia
| | - Stephanie E. Pierce
- Museum of Comparative Zoology and Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA, USA
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3
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Ishida M, Berio F, Di Santo V, Shubin NH, Iida F. Paleoinspired robotics as an experimental approach to the history of life. Sci Robot 2024; 9:eadn1125. [PMID: 39441900 DOI: 10.1126/scirobotics.adn1125] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/27/2023] [Accepted: 09/25/2024] [Indexed: 10/25/2024]
Abstract
Paleontologists must confront the challenge of studying the forms and functions of extinct species for which data from preserved fossils are extremely limited, yielding only a fragmented picture of life in deep time. In response to this hurdle, we describe the nascent field of paleoinspired robotics, an innovative method that builds upon established techniques in bioinspired robotics, enabling the exploration of the biology of ancient organisms and their evolutionary trajectories. This Review presents ways in which robotic platforms can fill gaps in existing research using the exemplars of notable transitions in vertebrate locomotion. We examine recent case studies in experimental paleontology, highlighting substantial contributions made by engineering and robotics techniques, and further assess how the efficient application of robotic technologies in close collaboration with paleontologists and biologists can offer additional insights into the study of evolution that were previously unattainable.
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Affiliation(s)
- Michael Ishida
- Department of Engineering, University of Cambridge, Trumpington Street, Cambridge CB2 1PZ, UK
| | - Fidji Berio
- Department of Zoology, Stockholm University, Svante Arrhenius väg 18B, 114 18 Stockholm, Sweden
| | - Valentina Di Santo
- Department of Zoology, Stockholm University, Svante Arrhenius väg 18B, 114 18 Stockholm, Sweden
| | - Neil H Shubin
- Department of Organismal Biology and Anatomy, University of Chicago, 1027 E 57th Street, Chicago, IL 60637, USA
| | - Fumiya Iida
- Department of Engineering, University of Cambridge, Trumpington Street, Cambridge CB2 1PZ, UK
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4
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Li X, Suo Z, Liu D, Liu J, Tian W, Wang J, Wang J. Bionic Multi-Legged Robots with Flexible Bodies: Design, Motion, and Control. Biomimetics (Basel) 2024; 9:628. [PMID: 39451834 PMCID: PMC11506302 DOI: 10.3390/biomimetics9100628] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2024] [Revised: 10/12/2024] [Accepted: 10/14/2024] [Indexed: 10/26/2024] Open
Abstract
Bionic multi-legged robots with flexible bodies embody human ingenuity in imitating, learning, and exploring the natural world. In contrast to rigid-body robots, these robots with flexible bodies exhibit superior locomotive capabilities. The flexible body of the robot not only boosts the moving speed and walking stability but also enhances adaptability across complex terrains. This article focuses on the innovative design of flexible bodies. Firstly, the structural designs, including artificial spines and single/multi-axis articulation mechanisms, are outlined systematically. Secondly, the enhancement of robotic motion by flexible bodies is reviewed, examining the impact that body degrees of freedom, stiffness, and coordinated control between the body and limbs have on robotic motion. Thirdly, existing robotic control methods, organized by control architectures, are comprehensively overviewed in this article. Finally, the application prospects of bionic multi-legged robots with flexible bodies are offered, and the challenges that may arise in their future development are listed. This article aims to serve as a reference for bionic robot research.
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Affiliation(s)
- Xiang Li
- Key Laboratory of CNC Equipment Reliability, Ministry of Education, School of Mechanical and Aerospace Engineering, Jilin University, Changchun 130022, China; (X.L.); (Z.S.); (J.L.)
| | - Zhe Suo
- Key Laboratory of CNC Equipment Reliability, Ministry of Education, School of Mechanical and Aerospace Engineering, Jilin University, Changchun 130022, China; (X.L.); (Z.S.); (J.L.)
| | - Dan Liu
- National Key Laboratory of Special Vehicle Design and Manufacturing Integration Technology, Inner Mongolia First Machinery Group Co., Ltd., Baotou 014030, China;
| | - Jianfeng Liu
- Key Laboratory of CNC Equipment Reliability, Ministry of Education, School of Mechanical and Aerospace Engineering, Jilin University, Changchun 130022, China; (X.L.); (Z.S.); (J.L.)
| | - Wenqing Tian
- FAW Tooling Die Manufacturing Corporation, China FAW Group Co., Ltd., Changchun 130013, China;
| | - Jixin Wang
- Key Laboratory of CNC Equipment Reliability, Ministry of Education, School of Mechanical and Aerospace Engineering, Jilin University, Changchun 130022, China; (X.L.); (Z.S.); (J.L.)
| | - Jianhua Wang
- College of Automotive Engineering, Jilin University, Changchun 130022, China
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5
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Jones KE, Angielczyk KD, Pierce SE. Origins of mammalian vertebral function revealed through digital bending experiments. Proc Biol Sci 2024; 291:20240820. [PMID: 38981526 PMCID: PMC11335002 DOI: 10.1098/rspb.2024.0820] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/08/2024] [Revised: 06/13/2024] [Accepted: 06/13/2024] [Indexed: 07/11/2024] Open
Abstract
Unravelling the functional steps that underlie major transitions in the fossil record is a significant challenge for biologists owing to the difficulties of interpreting functional capabilities of extinct organisms. New computational modelling approaches provide exciting avenues for testing function in the fossil record. Here, we conduct digital bending experiments to reconstruct vertebral function in non-mammalian synapsids, the extinct forerunners of mammals, to provide insights into the functional underpinnings of the synapsid-mammal transition. We estimate range of motion and stiffness of intervertebral joints in eight non-mammalian synapsid species alongside a comparative sample of extant tetrapods, including salamanders, reptiles and mammals. We show that several key aspects of mammalian vertebral function evolved outside crown Mammalia. Compared to early diverging non-mammalian synapsids, cynodonts stabilized the posterior trunk against lateroflexion, while evolving axial rotation in the anterior trunk. This was later accompanied by posterior sagittal bending in crown mammals, and perhaps even therians specifically. Our data also support the prior hypothesis that functional diversification of the mammalian trunk occurred via co-option of existing morphological regions in response to changing selective demands. Thus, multiple functional and evolutionary steps underlie the origin of remarkable complexity in the mammalian backbone.
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Affiliation(s)
- Katrina E. Jones
- Museum of Comparative Zoology and Department of Organismic and Evolutionary Biology, Harvard University, 26 Oxford Street, Cambridge, MA02138, USA
- Department of Earth and Environmental Sciences, University of Manchester, Williamson Building, Oxford Road, ManchesterM13 9PL, UK
| | - Kenneth D. Angielczyk
- Negaunee Integrative Research Center, Field Museum of Natural History, 1400 South Lake Shore Drive, Chicago, IL60605-2496, USA
| | - Stephanie E. Pierce
- Museum of Comparative Zoology and Department of Organismic and Evolutionary Biology, Harvard University, 26 Oxford Street, Cambridge, MA02138, USA
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6
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MacLaren JA. Looking back over the shoulder: New insights on the unique scapular anatomy of the tapir (Perissodactyla: Tapiridae). Anat Rec (Hoboken) 2024; 307:2121-2138. [PMID: 37966173 DOI: 10.1002/ar.25352] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/29/2023] [Revised: 11/03/2023] [Accepted: 11/05/2023] [Indexed: 11/16/2023]
Abstract
The musculoskeletal anatomy of the shoulder of many ungulates has been inferred from veterinary model taxa, with uniformity in muscle arrangements and attachment sites often assumed. In this study, I investigated the muscular and osteological anatomy of tapirs and their relatives (Perissodactyla: Tapiroidea), using a combination of gross dissection and digital imaging (photography and laser surface scanning). Dissections of three modern tapir species revealed that the m. infraspinatus originates from both supraspinous and infraspinous fossae for all species, lying on both sides of the distal scapular spine. The epimysial border between the m. supraspinatus and m. infraspinatus origin sites are marked in all species by an ossified ridge, sometimes extending the length of the scapular spine. This "supraspinous ridge" is clearly visible on the scapular surface of both modern and extinct Tapirus scapulae; however, the ridge does not appear present in any non-Tapirus tapiroids examined (e.g., Helaletes, Nexuotapirus), nor in other perissodactyls or artiodactyls. Moreover, the ridge exhibits a clearly distinct morphology in Tapirus indicus compared to all other Tapirus species examined. Combined, these findings indicate that the presence and position of the "supraspinous ridge" may represent a robust phylogenetic character for reconstructing relationships within tapiroids. Unfortunately, any functional locomotor outcomes or benefits of the m. infraspinatus straddling the scapular spine remains elusive. This study represents a firm reminder for anatomists, veterinarians, and paleontologists to (where possible) look beyond veterinary model systems when inferring musculoskeletal form or function in non-model organisms.
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Affiliation(s)
- Jamie A MacLaren
- Department of Biology, Universiteit Antwerpen, Wilrijk, Antwerp, Belgium
- Evolution & Diversity Dynamics Lab, UR Geology, Université de Liège, Liège, Belgium
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7
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Li P, Xiong C, Huang B, Sun B, Gong X. Terrestrial locomotion characteristics of climbing perch (Anabas testudineus). J Exp Biol 2024; 227:jeb247238. [PMID: 38752366 DOI: 10.1242/jeb.247238] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2023] [Accepted: 05/01/2024] [Indexed: 06/07/2024]
Abstract
The evolution and utilization of limbs facilitated terrestrial vertebrate movement on land, but little is known about how other lateral structures enhance terrestrial locomotion in amphibian fishes without terrestrialized limb structures. Climbing perch (Anabas testudineus) exhibit sustained terrestrial locomotion using uniaxial rotating gill covers instead of appendages. To investigate the role of such simple lateral structures in terrestrial locomotion and the motion-generating mechanism of the corresponding locomotor structure configuration (gill covers and body undulation), we measured the terrestrial kinematics of climbing perch and quantitatively analysed its motion characteristics. The digitized locomotor kinematics showed a unique body postural adjustment ability that enables the regulation of the posture of the caudal peduncle for converting lateral bending force into propulsion. An analysis of the coordination characteristics demonstrated that the motion of the gill cover is kinematically independent of axial undulation, suggesting that the gill cover functions as an anchored simple support pole while axial undulation actively mediates body posture and produces propulsive force. The two identified feature shapes explained more than 87% of the complex lateral undulation in multistage locomotion. The kinematic characteristics enhance our understanding of the underlying coordinating mechanism corresponding to locomotor configurations. Our work provides quantitative insight into the terrestrial locomotor adaptation of climbing perch and sheds light on terrestrial motion potential of locomotor configurations containing a typical aquatic body and restricted lateral structure.
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Affiliation(s)
- Peimin Li
- Institute of Medical Equipment Science and Engineering, School of Mechanical Science and Engineering , Huazhong University of Science and Technology, Wuhan, Hubei, China
| | - Caihua Xiong
- Institute of Medical Equipment Science and Engineering, School of Mechanical Science and Engineering , Huazhong University of Science and Technology, Wuhan, Hubei, China
| | - Bo Huang
- Institute of Medical Equipment Science and Engineering, School of Mechanical Science and Engineering , Huazhong University of Science and Technology, Wuhan, Hubei, China
| | - Baiyang Sun
- Institute of Medical Equipment Science and Engineering, School of Mechanical Science and Engineering , Huazhong University of Science and Technology, Wuhan, Hubei, China
| | - Xuan Gong
- Institute of Medical Equipment Science and Engineering, School of Mechanical Science and Engineering , Huazhong University of Science and Technology, Wuhan, Hubei, China
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8
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Sprumont H, Allione F, Schwab F, Wang B, Mucignat C, Lunati I, Scheyer T, Ijspeert A, Jusufi A. Asymmetric fin shape changes swimming dynamics of ancient marine reptiles' soft robophysical models. BIOINSPIRATION & BIOMIMETICS 2024; 19:046005. [PMID: 38626775 DOI: 10.1088/1748-3190/ad3f5e] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/15/2024] [Accepted: 04/16/2024] [Indexed: 05/09/2024]
Abstract
Animals have evolved highly effective locomotion capabilities in terrestrial, aerial, and aquatic environments. Over life's history, mass extinctions have wiped out unique animal species with specialized adaptations, leaving paleontologists to reconstruct their locomotion through fossil analysis. Despite advancements, little is known about how extinct megafauna, such as the Ichthyosauria one of the most successful lineages of marine reptiles, utilized their varied morphologies for swimming. Traditional robotics struggle to mimic extinct locomotion effectively, but the emerging soft robotics field offers a promising alternative to overcome this challenge. This paper aims to bridge this gap by studyingMixosauruslocomotion with soft robotics, combining material modeling and biomechanics in physical experimental validation. Combining a soft body with soft pneumatic actuators, the soft robotic platform described in this study investigates the correlation between asymmetrical fins and buoyancy by recreating the pitch torque generated by extinct swimming animals. We performed a comparative analysis of thrust and torque generated byCarthorhyncus,Utatsusaurus,Mixosaurus,Guizhouichthyosaurus, andOphthalmosaurustail fins in a flow tank. Experimental results suggest that the pitch torque on the torso generated by hypocercal fin shapes such as found in model systems ofGuizhouichthyosaurus,MixosaurusandUtatsusaurusproduce distinct ventral body pitch effects able to mitigate the animal's non-neutral buoyancy. This body pitch control effect is particularly pronounced inGuizhouichthyosaurus, which results suggest would have been able to generate high ventral pitch torque on the torso to compensate for its positive buoyancy. By contrast, homocercal fin shapes may not have been conducive for such buoyancy compensation, leaving torso pitch control to pectoral fins, for example. Across the range of the actuation frequencies of the caudal fins tested, resulted in oscillatory modes arising, which in turn can affect the for-aft thrust generated.
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Affiliation(s)
- Hadrien Sprumont
- Soft Kinetic Group, Engineering Sciences Department, Empa, 8600 Zuerich, Switzerland
- Biorobotics Laboratory, School of Engineering, EPFL, 1015 Lausanne, Switzerland
| | - Federico Allione
- Soft Kinetic Group, Engineering Sciences Department, Empa, 8600 Zuerich, Switzerland
| | - Fabian Schwab
- Soft Kinetic Group, Engineering Sciences Department, Empa, 8600 Zuerich, Switzerland
| | - Bingcheng Wang
- Soft Kinetic Group, Engineering Sciences Department, Empa, 8600 Zuerich, Switzerland
- Institute of Neuroinformatics, University of Zuerich and ETH Zuerich, 8057 Zuerich, Switzerland
| | - Claudio Mucignat
- Laboratory for Computational Engineering, Empa, 8600 Zuerich, Switzerland
| | - Ivan Lunati
- Laboratory for Computational Engineering, Empa, 8600 Zuerich, Switzerland
| | - Torsten Scheyer
- Paläontologisches Institut und Museum, Universität Zürich, 8006 Zuerich, Switzerland
| | - Auke Ijspeert
- Biorobotics Laboratory, School of Engineering, EPFL, 1015 Lausanne, Switzerland
| | - Ardian Jusufi
- Soft Kinetic Group, Engineering Sciences Department, Empa, 8600 Zuerich, Switzerland
- Institute of Neuroinformatics, University of Zuerich and ETH Zuerich, 8057 Zuerich, Switzerland
- Paläontologisches Institut und Museum, Universität Zürich, 8006 Zuerich, Switzerland
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9
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Gamel KM, Pinti S, Astley HC. Ground Reaction Forces and Energy Exchange During Underwater Walking. Integr Org Biol 2024; 6:obae013. [PMID: 38911182 PMCID: PMC11191838 DOI: 10.1093/iob/obae013] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/04/2023] [Revised: 03/07/2024] [Indexed: 06/25/2024] Open
Abstract
Underwater walking was a crucial step in the evolutionary transition from water to land. Underwater walkers use fins and/or limbs to interact with the benthic substrate and produce propulsive forces. The dynamics of underwater walking remain poorly understood due to the lack of a sufficiently sensitive and waterproof system to measure substrate reaction forces (SRFs). Using an underwater force plate (described in our companion paper), we quantify SRFs during underwater walking in axolotls (Ambystoma mexicanum) and Spot prawn (Pandalus platyceros), synchronized with videography. The horizontal propulsive forces were greater than the braking forces in both species to overcome hydrodynamic drag. In axolotls, potential energy (PE) fluctuations were far smaller than kinetic energy (KE) fluctuations due to high buoyant support (97%), whereas the magnitudes were similar in the prawn due to lower buoyant support (93%). However, both species show minimal evidence of exchange between KE and PE, which, along with the effects of hydrodynamic drag, is incompatible with inverted pendulum dynamics. Our results show that, despite their evolutionary links, underwater walking has fundamentally different dynamics compared with terrestrial walking and emphasize the substantial consequences of differences in body plan in underwater walking.
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Affiliation(s)
- K M Gamel
- Department of Biology, University of Akron, 235 Carroll St., Akron, OH 44325, USA
- Naval Undersea Warfare Center, Division Newport, 1176 Howell St., Newport, RI 002841, USA
| | - S Pinti
- Department of Biological Sciences, Kent State University, 800 E. Summit St, Kent, OH 44242, USA
| | - H C Astley
- Department of Biology, University of Akron, 235 Carroll St., Akron, OH 44325, USA
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10
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Voigt S, Calábková G, Ploch I, Nosek V, Pawlak W, Raczyński P, Spindler F, Werneburg R. A diadectid skin impression and its implications for the evolutionary origin of epidermal scales. Biol Lett 2024; 20:20240041. [PMID: 38773928 PMCID: PMC11285442 DOI: 10.1098/rsbl.2024.0041] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/23/2024] [Revised: 03/22/2024] [Accepted: 03/22/2024] [Indexed: 05/24/2024] Open
Abstract
Corneous skin appendages are not only common and diverse in crown-group amniotes but also present in some modern amphibians. This raises the still unresolved question of whether the ability to form corneous skin appendages is an apomorphy of a common ancestor of amphibians and amniotes or evolved independently in both groups. So far, there is no palaeontological contribution to the issue owing to the lack of keratin soft tissue preservation in Palaeozoic anamniotes. New data are provided by a recently discovered ichnofossil specimen from the early Permian of Poland that shows monospecific tetrapod footprints associated with a partial scaly body impression. The traces can be unambiguously attributed to diadectids and are interpreted as the globally first evidence of horned scales in tetrapods close to the origin of amniotes. Taking hitherto little-noticed scaly skin impressions of lepospondyl stem amniotes from the early Permian of Germany into account, the possibility has to be considered that the evolutionary origin of epidermal scales deeply roots among anamniotes.
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Affiliation(s)
- Sebastian Voigt
- Urweltmuseum GEOSKOP, Burgstr. 19, Thallichtenberg66871, Germany
| | - Gabriela Calábková
- Department of Geology and Paleontology, Moravian Museum, Zelný Trh 6,Brno 659 37, Czech Republic
| | - Izabela Ploch
- Polish Geological Institute – National Research Institute, Rakowiecka 4,Warszawa 00-975, Poland
| | - Vojtěch Nosek
- Department of Archaeology and Museology, Faculty of Arts, Masaryk University, Joštova 220/13,Brno 662 43, Czech Republic
| | - Wojciech Pawlak
- Department of Biology, University of Warsaw, Miecznikowa 1,Warszawa 02-089, Poland
| | - Paweł Raczyński
- Institute of Geological Sciences, Wrocław University, Pl. Maksa Borna 9, Wrocław50-204, Poland
| | | | - Ralf Werneburg
- Naturhistorisches Museum Schloss Bertholdsburg Schleusingen, Burgstr. 6,Schleusingen 98553, Germany
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Shafiee M, Bellegarda G, Ijspeert A. Viability leads to the emergence of gait transitions in learning agile quadrupedal locomotion on challenging terrains. Nat Commun 2024; 15:3073. [PMID: 38594288 PMCID: PMC11271497 DOI: 10.1038/s41467-024-47443-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2023] [Accepted: 03/27/2024] [Indexed: 04/11/2024] Open
Abstract
Quadruped animals are capable of seamless transitions between different gaits. While energy efficiency appears to be one of the reasons for changing gaits, other determinant factors likely play a role too, including terrain properties. In this article, we propose that viability, i.e., the avoidance of falls, represents an important criterion for gait transitions. We investigate the emergence of gait transitions through the interaction between supraspinal drive (brain), the central pattern generator in the spinal cord, the body, and exteroceptive sensing by leveraging deep reinforcement learning and robotics tools. Consistent with quadruped animal data, we show that the walk-trot gait transition for quadruped robots on flat terrain improves both viability and energy efficiency. Furthermore, we investigate the effects of discrete terrain (i.e., crossing successive gaps) on imposing gait transitions, and find the emergence of trot-pronk transitions to avoid non-viable states. Viability is the only improved factor after gait transitions on both flat and discrete gap terrains, suggesting that viability could be a primary and universal objective of gait transitions, while other criteria are secondary objectives and/or a consequence of viability. Moreover, our experiments demonstrate state-of-the-art quadruped robot agility in challenging scenarios.
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Affiliation(s)
- Milad Shafiee
- Biorobotics Laboratory, École Polytechnique Fédérale de Lausanne (EPFL), 1015, Lausanne, Switzerland.
| | - Guillaume Bellegarda
- Biorobotics Laboratory, École Polytechnique Fédérale de Lausanne (EPFL), 1015, Lausanne, Switzerland
| | - Auke Ijspeert
- Biorobotics Laboratory, École Polytechnique Fédérale de Lausanne (EPFL), 1015, Lausanne, Switzerland
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12
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Arreguit J, Ramalingasetty ST, Ijspeert A. FARMS: Framework for Animal and Robot Modeling and Simulation. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2023.09.25.559130. [PMID: 38293071 PMCID: PMC10827226 DOI: 10.1101/2023.09.25.559130] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/01/2024]
Abstract
The study of animal locomotion and neuromechanical control offers valuable insights for advancing research in neuroscience, biomechanics, and robotics. We have developed FARMS (Framework for Animal and Robot Modeling and Simulation), an open-source, interdisciplinary framework, designed to facilitate access to neuromechanical simulations for modeling, simulation, and analysis of animal locomotion and bio-inspired robotic systems. By providing an accessible and user-friendly platform, FARMS aims to lower the barriers for researchers to explore the complex interactions between the nervous system, musculoskeletal structures, and their environment. Integrating the MuJoCo physics engine in a modular manner, FARMS enables realistic simulations and fosters collaboration among neuroscientists, biologists, and roboticists. FARMS has already been extensively used to study locomotion in animals such as mice, drosophila, fish, salamanders, and centipedes, serving as a platform to investigate the role of central pattern generators and sensory feedback. This article provides an overview of the FARMS framework, discusses its interdisciplinary approach, showcases its versatility through specific case studies, and highlights its effectiveness in advancing our understanding of locomotion. In particular, we show how we used FARMS to study amphibious locomotion by presenting experimental demonstrations across morphologies and environments based on neural controllers with central pattern generators and sensory feedback circuits models. Overall, the goal of FARMS is to contribute to a deeper understanding of animal locomotion, the development of innovative bio-inspired robotic systems, and promote accessibility in neuromechanical research.
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Affiliation(s)
- Jonathan Arreguit
- BioRob, School of Engineering, Institute of Bioengineering, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland
| | - Shravan Tata Ramalingasetty
- BioRob, School of Engineering, Institute of Bioengineering, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland
- Department of Neurobiology and Anatomy, College of Medicine, Drexel University, Philadelphia, USA
| | - Auke Ijspeert
- BioRob, School of Engineering, Institute of Bioengineering, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland
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Manafzadeh AR, Gatesy SM, Bhullar BAS. Articular surface interactions distinguish dinosaurian locomotor joint poses. Nat Commun 2024; 15:854. [PMID: 38365765 PMCID: PMC10873393 DOI: 10.1038/s41467-024-44832-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/05/2023] [Accepted: 01/08/2024] [Indexed: 02/18/2024] Open
Abstract
Our knowledge of vertebrate functional evolution depends on inferences about joint function in extinct taxa. Without rigorous criteria for evaluating joint articulation, however, such analyses risk misleading reconstructions of vertebrate animal motion. Here we propose an approach for synthesizing raycast-based measurements of 3-D articular overlap, symmetry, and congruence into a quantitative "articulation score" for any non-interpenetrating six-degree-of-freedom joint configuration. We apply our methodology to bicondylar hindlimb joints of two extant dinosaurs (guineafowl, emu) and, through comparison with in vivo kinematics, find that locomotor joint poses consistently have high articulation scores. We then exploit this relationship to constrain reconstruction of a pedal walking stride cycle for the extinct dinosaur Deinonychus antirrhopus, demonstrating the utility of our approach. As joint articulation is investigated in more living animals, the framework we establish here can be expanded to accommodate additional joints and clades, facilitating improved understanding of vertebrate animal motion and its evolution.
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Affiliation(s)
- Armita R Manafzadeh
- Yale Institute for Biospheric Studies, Yale University, New Haven, CT, 06520, USA.
- Department of Earth & Planetary Sciences, Yale University, New Haven, CT, 06520, USA.
- Yale Peabody Museum of Natural History, New Haven, CT, 06520, USA.
| | - Stephen M Gatesy
- Department of Ecology, Evolution, and Organismal Biology, Brown University, Providence, RI, 02912, USA
| | - Bhart-Anjan S Bhullar
- Department of Earth & Planetary Sciences, Yale University, New Haven, CT, 06520, USA
- Yale Peabody Museum of Natural History, New Haven, CT, 06520, USA
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14
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Formoso KK, Habib MB, Vélez-Juarbe J. The Role of Locomotory Ancestry on Secondarily Aquatic Transitions. Integr Comp Biol 2023; 63:1140-1153. [PMID: 37591628 DOI: 10.1093/icb/icad112] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/14/2023] [Revised: 07/11/2023] [Accepted: 07/12/2023] [Indexed: 08/19/2023] Open
Abstract
Land-to-sea evolutionary transitions are great transformations where terrestrial amniote clades returned to aquatic environments. These secondarily aquatic amniote clades include charismatic marine mammal and marine reptile groups, as well as countless semi-aquatic forms that modified their terrestrial locomotor anatomy to varying degrees to be suited for swimming via axial and/or appendicular propulsion. The terrestrial ancestors of secondarily aquatic groups would have started off swimming strikingly differently from one another given their evolutionary histories, as inferred by the way modern terrestrial amniotes swim. With such stark locomotor functional differences between reptiles and mammals, we ask if this impacted these transitions. Axial propulsion appears favored by aquatic descendants of terrestrially sprawling quadrupedal reptiles, with exceptions. Appendicular propulsion is more prevalent across the aquatic descendants of ancestrally parasagittal-postured mammals, particularly early transitioning forms. Ancestral terrestrial anatomical differences that precede secondarily aquatic invasions between mammals and reptiles, as well as the distribution of axial and appendicular swimming in secondarily aquatic clades, may indicate that ancestral terrestrial locomotor anatomy played a role, potentially in both constraint and facilitation, in certain aquatic locomotion styles. This perspective of the land-to-sea transition can lead to new avenues of functional, biomechanical, and developmental study of secondarily aquatic transitions.
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Affiliation(s)
- Kiersten K Formoso
- Department of Earth Sciences, University of Southern California, 3651 Trousedale Pkwy, Zumberge Hall, Los Angeles, CA 90089, USA
- Dinosaur Institute, Natural History Museum of Los Angeles County, 900 Exposition Blvd, Los Angeles, CA 90007-4057, USA
| | - Michael B Habib
- Dinosaur Institute, Natural History Museum of Los Angeles County, 900 Exposition Blvd, Los Angeles, CA 90007-4057, USA
- UCLA Cardiac Arrhythmia Center, Division of Cardiology, 100 Medical Plaza, Suite 660, Los Angeles, CA 90095, USA
| | - Jorge Vélez-Juarbe
- Department of Mammalogy, Natural History Museum of Los Angeles County, 900 Exposition Blvd, Los Angelss, CA 90007-4057, USA
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15
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Melo K, Horvat T, Ijspeert AJ. Animal robots in the African wilderness: Lessons learned and outlook for field robotics. Sci Robot 2023; 8:eadd8662. [PMID: 38055805 DOI: 10.1126/scirobotics.add8662] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/09/2022] [Accepted: 11/10/2023] [Indexed: 12/08/2023]
Abstract
In early 2016, we had the opportunity to test a pair of sprawling posture robots, one designed to mimic a crocodile and another designed to mimic a monitor lizard, along the banks of the Nile River in Uganda, Africa. These robots were developed uniquely for a documentary by the BBC called Spy in the Wild and fell at the intersection of our interests in developing robots to study animals and robots for disaster response and other missions in challenging environments. The documentary required that these robots not only walk and swim in the same harsh, natural environments as the animals that they were modeled on and film up close but also move and even look exactly like the real animals from an aesthetic perspective. This pushed us to take a fundamentally different approach to the design and building of biorobots compared with our typical laboratory-residing robots, in addition to collaborating with sculpting artists to enhance our robots' aesthetics. The robots needed to be designed on the basis of a systematic study of data on the model specimens, be fabricated rapidly, and be reliable and robust enough to handle what the wild would throw at them. Here, we share the research efforts of this collaboration, the design specifications of the robots' hardware and software, the lessons learned from testing these robots in the field first hand, and how the eye-opening experience shaped our subsequent work on disaster response robotics and biorobotics for challenging amphibious scenarios.
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Affiliation(s)
- Kamilo Melo
- KM-RoBoTa Sàrl, Renens, Switzerland
- École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland
| | - Tomislav Horvat
- École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland
- Verity AG, Zurich, Switzerland
| | - Auke J Ijspeert
- École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland
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16
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Calábková G, Madzia D, Nosek V, Ivanov M. Tracking 'transitional' diadectomorphs in the earliest Permian of equatorial Pangea. PeerJ 2023; 11:e16603. [PMID: 38077424 PMCID: PMC10710172 DOI: 10.7717/peerj.16603] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/10/2023] [Accepted: 11/15/2023] [Indexed: 12/18/2023] Open
Abstract
Diadectomorpha was a clade of large-bodied stem-amniotes or possibly early-diverging synapsids that established a successful dynasty of late Carboniferous to late Permian high-fiber herbivores. Aside from their fairly rich record of body fossils, diadectomorphs are also well-known from widely distributed tracks and trackways referred to as Ichniotherium. Here, we provide detailed description of a diadectomorph trackway and a manus-pes couple originating from two different horizons in the Asselian (lowermost Permian) of the Boskovice Basin in the Czech Republic. The specimens represent two distinct ichnotaxa of Ichniotherium, I. cottae and I. sphaerodactylum. Intriguingly, the I. cottae trackway described herein illustrates a 'transitional' stage in the posture evolution of diadectomorphs, showing track morphologies possibly attributable to a Diadectes-like taxon combined with distances between the successive manus and pes imprints similar to those observable in earlier-diverging diadectomorphs, such as Orobates. In addition, this trackway is composed of 14 tracks, including six well-preserved manus-pes couples, and thus represents the most complete record of Ichniotherium cottae described to date from the Asselian strata. In turn, the manus-pes couple, attributed here to I. sphaerodactylum, represents only the second record of this ichnotaxon from the European part of Pangea. Our study adds to the diversity of the ichnological record of Permian tetrapods in the Boskovice Basin which had been essentially unexplored until very recently.
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Affiliation(s)
- Gabriela Calábková
- Department of Geology and Paleontology, Moravian Museum, Brno, Czech Republic
- Department of Geological Sciences, Faculty of Science, Masaryk University, Brno, Czech Republic
| | - Daniel Madzia
- Department of Evolutionary Paleobiology, Institute of Paleobiology, Polish Academy of Sciences, Warsaw, Poland
| | - Vojtěch Nosek
- Department of Archaeology and Museology, Faculty of Arts, Masaryk University, Brno, Czech Republic
| | - Martin Ivanov
- Department of Geological Sciences, Faculty of Science, Masaryk University, Brno, Czech Republic
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17
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Schwarz D, Heiss E, Pierson TW, Konow N, Schoch RR. Using salamanders as model taxa to understand vertebrate feeding constraints during the late Devonian water-to-land transition. Philos Trans R Soc Lond B Biol Sci 2023; 378:20220541. [PMID: 37839447 PMCID: PMC10577038 DOI: 10.1098/rstb.2022.0541] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/01/2023] [Accepted: 07/23/2023] [Indexed: 10/17/2023] Open
Abstract
The vertebrate water-to-land transition and the rise of tetrapods brought about fundamental changes for the groups undergoing these evolutionary changes (i.e. stem and early tetrapods). These groups were forced to adapt to new conditions, including the distinct physical properties of water and air, requiring fundamental changes in anatomy. Nutrition (or feeding) was one of the prime physiological processes these vertebrates had to successfully adjust to change from aquatic to terrestrial life. The basal gnathostome feeding mode involves either jaw prehension or using water flows to aid in ingestion, transportation and food orientation. Meanwhile, processing was limited primarily to simple chewing bites. However, given their comparatively massive and relatively inflexible hyobranchial system (compared to the more muscular tongue of many tetrapods), it remains fraught with speculation how stem and early tetrapods managed to feed in both media. Here, we explore ontogenetic water-to-land transitions of salamanders as functional analogues to model potential changes in the feeding behaviour of stem and early tetrapods. Our data suggest two scenarios for terrestrial feeding in stem and early tetrapods as well as the presence of complex chewing behaviours, including excursions of the jaw in more than one dimension during early developmental stages. Our results demonstrate that terrestrial feeding may have been possible before flexible tongues evolved. This article is part of the theme issue 'Food processing and nutritional assimilation in animals'.
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Affiliation(s)
- Daniel Schwarz
- Department of Palaeontology, State Museum of Natural History Stuttgart, Rosenstein 1, 70191 Stuttgart, Germany
- Institute of Zoology and Evolutionary Research, Friedrich Schiller University Jena, Erbertstrasse 1, 07743 Jena, Germany
| | - Egon Heiss
- Institute of Zoology and Evolutionary Research, Friedrich Schiller University Jena, Erbertstrasse 1, 07743 Jena, Germany
| | - Todd W. Pierson
- Department of Ecology, Evolution, and Organismal Biology, Kennesaw State University, Kennesaw, GA 30144, USA
| | - Nicolai Konow
- Department of Biological Sciences, University of Massachusetts Lowell, 198 Riverside Street, Lowell, MA 01854, USA
| | - Rainer R. Schoch
- Department of Palaeontology, State Museum of Natural History Stuttgart, Rosenstein 1, 70191 Stuttgart, Germany
- Institute for Biology, Department of Palaeontology, University of Hohenheim, Wollgrasweg 23, 70599 Stuttgart, Germany
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18
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Wang Z, Zhang W, Li J, Wang J, Yang Y, Bao T, Wu J, Wang B. Animating fossilized invertebrates by motion reconstruction. Natl Sci Rev 2023; 10:nwad268. [PMID: 38033735 PMCID: PMC10684265 DOI: 10.1093/nsr/nwad268] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/02/2023] [Revised: 10/12/2023] [Accepted: 10/12/2023] [Indexed: 12/02/2023] Open
Abstract
Taking the motion reconstruction of the Cretaceous hell ants as an example, this study shows how to achieve motion reconstruction in fossil invertebrates and discusses potential challenges and opportunities.
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Affiliation(s)
- Zixin Wang
- School of Advanced Manufacturing, Sun Yat-sen University, China
- School of Engineering and Technology, China University of Geosciences (Beijing), China
| | - Wei Zhang
- Department of Mechanical Engineering, City University of Hong Kong, China
- School of Aeronautics and Astronautics, Sun Yat-sen University, China
| | - Jiahao Li
- State Key Laboratory of Palaeobiology and Stratigraphy, Nanjing Institute of Geology and Palaeontology and Center for Excellence in Life and Paleoenvironment, Chinese Academy of Sciences, China
- University of Chinese Academy of Sciences, China
| | - Ji Wang
- School of Aeronautics and Astronautics, Sun Yat-sen University, China
| | - Yunqiang Yang
- School of Engineering and Technology, China University of Geosciences (Beijing), China
| | - Tong Bao
- School of Ecology, Sun Yat-sen University, China
| | - Jianing Wu
- School of Advanced Manufacturing, Sun Yat-sen University, China
| | - Bo Wang
- State Key Laboratory of Palaeobiology and Stratigraphy, Nanjing Institute of Geology and Palaeontology and Center for Excellence in Life and Paleoenvironment, Chinese Academy of Sciences, China
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19
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Arias AA, Azizi E. Modulation of limb mechanics in alligators moving across varying grades. J Exp Biol 2023; 226:jeb246025. [PMID: 37930362 DOI: 10.1242/jeb.246025] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/27/2023] [Accepted: 10/23/2023] [Indexed: 11/07/2023]
Abstract
Graded substrates require legged animals to modulate their limb mechanics to meet locomotor demands. Previous work has elucidated strategies used by cursorial animals with upright limb posture, but it remains unclear how sprawling species such as alligators transition between grades. We measured individual limb forces and 3D kinematics as alligators walked steadily across level, 15 deg incline and 15 deg decline conditions. We compared our results with the literature to determine how limb posture alters strategies for managing the energetic variation that accompanies shifts in grade. We found that juvenile alligators maintain spatiotemporal characteristics of gait and locomotor speed while selectively modulating craniocaudal impulses (relative to level) when transitioning between grades. Alligators seem to accomplish this using a variety of kinematic strategies, but consistently sprawl both limb pairs outside of the parasagittal plane during decline walking. This latter result suggests alligators and other sprawling species may use movements outside of the parasagittal plane as an axis of variation to modulate limb mechanics when transitioning between graded substrates. We conclude that limb mechanics during graded locomotion are fairly predictable across quadrupedal species, regardless of body plan and limb posture, with hindlimbs playing a more propulsive role and forelimbs functioning to dissipate energy. Future work will elucidate how shifts in muscle properties or function underlie such shifts in limb kinematics.
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Affiliation(s)
- Adrien A Arias
- Department of Ecology and Evolutionary Biology, University of California, Irvine, 321 Steinhaus Hall, Irvine, CA 92697, USA
| | - Emanuel Azizi
- Department of Ecology and Evolutionary Biology, University of California, Irvine, 321 Steinhaus Hall, Irvine, CA 92697, USA
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20
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Desatnik R, Patterson ZJ, Gorzelak P, Zamora S, LeDuc P, Majidi C. Soft robotics informs how an early echinoderm moved. Proc Natl Acad Sci U S A 2023; 120:e2306580120. [PMID: 37931097 PMCID: PMC10655572 DOI: 10.1073/pnas.2306580120] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/24/2023] [Accepted: 08/03/2023] [Indexed: 11/08/2023] Open
Abstract
The transition from sessile suspension to active mobile detritus feeding in early echinoderms (c.a. 500 Mya) required sophisticated locomotion strategies. However, understanding locomotion adopted by extinct animals in the absence of trace fossils and modern analogues is extremely challenging. Here, we develop a biomimetic soft robot testbed with accompanying computational simulation to understand fundamental principles of locomotion in one of the most enigmatic mobile groups of early stalked echinoderms-pleurocystitids. We show that these Paleozoic echinoderms were likely able to move over the sea bottom by means of a muscular stem that pushed the animal forward (anteriorly). We also demonstrate that wide, sweeping gaits could have been the most effective for these echinoderms and that increasing stem length might have significantly increased velocity with minimal additional energy cost. The overall approach followed here, which we call "Paleobionics," is a nascent but rapidly developing research agenda in which robots are designed based on extinct organisms to generate insights in engineering and evolution.
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Affiliation(s)
- Richard Desatnik
- Mechanical Engineering, Carnegie Mellon University, Pittsburgh, PA15213
| | - Zach J. Patterson
- Mechanical Engineering, Carnegie Mellon University, Pittsburgh, PA15213
- Computer Science and Artificial Intelligence Laboratory, Massachusetts Institute of Technology, Cambridge, MA02139
| | | | - Samuel Zamora
- Instituto Geológico y Minero de España - Consejo Superior de Investigaciones Científicas, Residencia, Campus Aula Dei, Zaragoza50059, Spain
| | - Philip LeDuc
- Mechanical Engineering, Carnegie Mellon University, Pittsburgh, PA15213
- Biological Sciences, Carnegie Mellon University, Pittsburgh, PA15213
- Computational Biology, Carnegie Mellon University, Pittsburgh, PA15213
- Biomedical Engineering, Carnegie Mellon University, Pittsburgh, PA15213
| | - Carmel Majidi
- Mechanical Engineering, Carnegie Mellon University, Pittsburgh, PA15213
- Biomedical Engineering, Carnegie Mellon University, Pittsburgh, PA15213
- Robotics Institute, Carnegie Mellon University, Pittsburgh, PA15213
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21
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Lee ECS, Young NM, Rainbow MJ. A comparative approach for characterizing the relationship among morphology, range-of-motion and locomotor behaviour in the primate shoulder. Proc Biol Sci 2023; 290:20231446. [PMID: 37848066 PMCID: PMC10581761 DOI: 10.1098/rspb.2023.1446] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/26/2023] [Accepted: 09/08/2023] [Indexed: 10/19/2023] Open
Abstract
Shoulder shape directly impacts forelimb function by contributing to glenohumeral (GH) range-of-motion (ROM). However, identifying traits that contribute most to ROM and visualizing how they do so remains challenging, ultimately limiting our ability to reconstruct function and behaviour in fossil species. To address these limitations, we developed an in silico proximity-driven model to simulate and visualize three-dimensional (3D) GH rotations in living primate species with diverse locomotor profiles, identify those shapes that are most predictive of ROM using geometric morphometrics, and apply subsequent insights to interpret function and behaviour in the fossil hominin Australopithecus sediba. We found that ROM metrics that incorporated 3D rotations best discriminated locomotor groups, and the magnitude of ROM (mobility) was decoupled from the anatomical location of ROM (e.g. high abduction versus low abduction). Morphological traits that enhanced mobility were decoupled from those that enabled overhead positions, and all non-human apes possessed the latter but not necessarily the former. Model simulation in A. sediba predicted high mobility and a ROM centred at lower abduction levels than in living apes but higher than in modern humans. Together these results identify novel form-to-function relationships in the shoulder and enhance visualization tools to reconstruct past function and behaviour.
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Affiliation(s)
- Erin C. S. Lee
- Department of Mechanical and Materials Engineering, Queen's University, Kingston, Ontario, Canada K7L 2V9
| | - Nathan M. Young
- Department of Orthopaedic Surgery, University of California, San Francisco, CA 94110, USA
| | - Michael J. Rainbow
- Department of Mechanical and Materials Engineering, Queen's University, Kingston, Ontario, Canada K7L 2V9
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22
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Anderson L, Brassey C, Pond S, Bates K, Sellers WI. Investigating the quadrupedal abilities of Scutellosaurus lawleri and its implications for locomotor behavior evolution among dinosaurs. Anat Rec (Hoboken) 2023; 306:2514-2536. [PMID: 36896818 DOI: 10.1002/ar.25189] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2022] [Revised: 01/19/2023] [Accepted: 02/08/2023] [Indexed: 03/11/2023]
Abstract
A reversion to secondary quadrupedality is exceptionally rare in nature, yet the convergent re-evolution of this locomotor style occurred at least four separate times within Dinosauria. Facultative quadrupedality, an intermediate state between obligate bipedality and obligate quadrupedality, may have been an important transitional step in this locomotor shift, and is proposed for a range of basal ornithischians and sauropodomorphs. Advances in virtual biomechanical modeling and simulation have allowed for the investigation of limb anatomy and function in a range of extinct dinosaurian species, yet this technique has not been widely applied to explore facultatively quadrupedal gait generation. This study places its focus on Scutellosaurus, a basal thyreophoran that has previously been described as both an obligate biped and a facultative quadruped. The functional anatomy of the musculoskeletal system (myology, mass properties, and joint ranges of motion) has been reconstructed using extant phylogenetic bracketing and comparative anatomical datasets. This information was used to create a multi-body dynamic locomotor simulation that demonstrates that whil quadrupedal gaits were physically possible, they did not outperform bipedal gaits is any tested metric. Scutellosaurus cannot therefore be described as an obligate biped, but we would predict its use of quadrupedality would be very rare, and perhaps restricted to specific activities such as foraging. This finding suggests that basal thyreophorans are still overwhelmingly bipedal but is perhaps indicative of an adaptive pathway for later evolution of quadrupedality.
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23
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Gônet J, Laurin M, Hutchinson JR. Evolution of posture in amniotes-Diving into the trabecular architecture of the femoral head. J Evol Biol 2023; 36:1150-1165. [PMID: 37363887 DOI: 10.1111/jeb.14187] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/29/2022] [Revised: 03/29/2023] [Accepted: 04/16/2023] [Indexed: 06/28/2023]
Abstract
Extant amniotes show remarkable postural diversity. Broadly speaking, limbs with erect (strongly adducted, more vertically oriented) posture are found in mammals that are particularly heavy (graviportal) or show good running skills (cursorial), while crouched (highly flexed) limbs are found in taxa with more generalized locomotion. In Reptilia, crocodylians have a "semi-erect" (somewhat adducted) posture, birds have more crouched limbs and lepidosaurs have sprawling (well-abducted) limbs. Both synapsids and reptiles underwent a postural transition from sprawling to more erect limbs during the Mesozoic Era. In Reptilia, this postural change is prominent among archosauriforms in the Triassic Period. However, limb posture in many key Triassic taxa remains poorly known. In Synapsida, the chronology of this transition is less clear, and competing hypotheses exist. On land, the limb bones are subject to various stresses related to body support that partly shape their external and internal morphology. Indeed, bone trabeculae (lattice-like bony struts that form the spongy bone tissue) tend to orient themselves along lines of force. Here, we study the link between femoral posture and the femoral trabecular architecture using phylogenetic generalized least squares. We show that microanatomical parameters measured on bone cubes extracted from the femoral head of a sample of amniote femora depend strongly on body mass, but not on femoral posture or lifestyle. We reconstruct ancestral states of femoral posture and various microanatomical parameters to study the "sprawling-to-erect" transition in reptiles and synapsids, and obtain conflicting results. We tentatively infer femoral posture in several hypothetical ancestors using phylogenetic flexible discriminant analysis from maximum likelihood estimates of the microanatomical parameters. In general, the trabecular network of the femoral head is not a good indicator of femoral posture. However, ancestral state reconstruction methods hold great promise for advancing our understanding of the evolution of posture in amniotes.
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Affiliation(s)
- Jordan Gônet
- Centre de recherche en paléontologie - Paris, UMR 7207, Sorbonne Université, Muséum national d'histoire naturelle, Centre national de la recherche scientifique, Paris, France
| | - Michel Laurin
- Centre de recherche en paléontologie - Paris, UMR 7207, Sorbonne Université, Muséum national d'histoire naturelle, Centre national de la recherche scientifique, Paris, France
| | - John R Hutchinson
- Structure and Motion Laboratory, Department of Comparative Biomedical Sciences, Royal Veterinary College, Hatfield, UK
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24
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Ramdya P, Ijspeert AJ. The neuromechanics of animal locomotion: From biology to robotics and back. Sci Robot 2023; 8:eadg0279. [PMID: 37256966 DOI: 10.1126/scirobotics.adg0279] [Citation(s) in RCA: 11] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/12/2022] [Accepted: 05/05/2023] [Indexed: 06/02/2023]
Abstract
Robotics and neuroscience are sister disciplines that both aim to understand how agile, efficient, and robust locomotion can be achieved in autonomous agents. Robotics has already benefitted from neuromechanical principles discovered by investigating animals. These include the use of high-level commands to control low-level central pattern generator-like controllers, which, in turn, are informed by sensory feedback. Reciprocally, neuroscience has benefited from tools and intuitions in robotics to reveal how embodiment, physical interactions with the environment, and sensory feedback help sculpt animal behavior. We illustrate and discuss exemplar studies of this dialog between robotics and neuroscience. We also reveal how the increasing biorealism of simulations and robots is driving these two disciplines together, forging an integrative science of autonomous behavioral control with many exciting future opportunities.
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Affiliation(s)
- Pavan Ramdya
- Neuroengineering Laboratory, Brain Mind Institute and Institute of Bioengineering, EPFL, Lausanne, Switzerland
| | - Auke Jan Ijspeert
- Biorobotics Laboratory, Institute of Bioengineering, EPFL, Lausanne, Switzerland
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25
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Demuth OE, Herbst E, Polet DT, Wiseman ALA, Hutchinson JR. Modern three-dimensional digital methods for studying locomotor biomechanics in tetrapods. J Exp Biol 2023; 226:jeb245132. [PMID: 36810943 PMCID: PMC10042237 DOI: 10.1242/jeb.245132] [Citation(s) in RCA: 7] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/24/2023]
Abstract
Here, we review the modern interface of three-dimensional (3D) empirical (e.g. motion capture) and theoretical (e.g. modelling and simulation) approaches to the study of terrestrial locomotion using appendages in tetrapod vertebrates. These tools span a spectrum from more empirical approaches such as XROMM, to potentially more intermediate approaches such as finite element analysis, to more theoretical approaches such as dynamic musculoskeletal simulations or conceptual models. These methods have much in common beyond the importance of 3D digital technologies, and are powerfully synergistic when integrated, opening a wide range of hypotheses that can be tested. We discuss the pitfalls and challenges of these 3D methods, leading to consideration of the problems and potential in their current and future usage. The tools (hardware and software) and approaches (e.g. methods for using hardware and software) in the 3D analysis of tetrapod locomotion have matured to the point where now we can use this integration to answer questions we could never have tackled 20 years ago, and apply insights gleaned from them to other fields.
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Affiliation(s)
- Oliver E. Demuth
- Department of Earth Sciences, University of Cambridge, Cambridge, CB2 3EQ, UK
| | - Eva Herbst
- Palaeontological Institute and Museum, University of Zurich, 8006 Zürich, Switzerland
| | - Delyle T. Polet
- Structure and Motion Laboratory, Department of Comparative Biomedical Sciences, Royal Veterinary College, North Mymms, AL9 7TA, UK
| | - Ashleigh L. A. Wiseman
- McDonald Institute for Archaeological Research, University of Cambridge, Cambridge, CB2 3ER, UK
| | - John R. Hutchinson
- Structure and Motion Laboratory, Department of Comparative Biomedical Sciences, Royal Veterinary College, North Mymms, AL9 7TA, UK
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Campanelli L. A simple model of human walking. JOURNAL OF MEDICAL SCIENCE 2023. [DOI: 10.20883/medical.e817] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/31/2023] Open
Abstract
Aim. We investigate Alexander’s inverted pendulum model, the simplest mathematical model of human walking. Although it successfully explains some kinematic features of human walking, such as the velocity of the body's centre of mass, it does not account for others, like the vertical reaction force and the maximum walking speed. This paper aims to minimally extend Alexander’s model in such a way as to make it a viable and quantitative model of human walking for clinical biomechanics.Material and methods. In order to compare the predictions of Alexander’s model with experimental data on walking, we incorporate in it a robust phenomenological relation between stride frequency and stride length derived in the literature, and we introduce a step-angle dependent muscle force along the pendulum. We then analytically solve the pendulum's motion equation and find the corresponding analytical expression for the average walking speed.Results. The values of the average walking speed for different heights predicted by our model are in excellent agreement with the ones obtained in treadmill experiments. Moreover, it successfully predicts the observed walking-running transition speed, which occurs when the stride length equals the height of an individual. Finally, our extended model satisfactorily reproduces the experimentally observed ground reaction forces in the midstance and terminal stance phases. Consequently, the predicted value of the (height-dependent) maximum walking speed is in reasonable agreement with the one obtained in more sophisticated models of human walking.Conclusions. Augmented with our minimal extensions, Alexander’s model becomes an effective and realistic model of human walking applicable in clinical investigations of the human gate.
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Lv Y, Zhou Z. Humeri under external load: Mechanical implications of differing bone curvature in American otter and honey badger. J Theor Biol 2023; 558:111358. [PMID: 36410449 DOI: 10.1016/j.jtbi.2022.111358] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2021] [Revised: 11/04/2022] [Accepted: 11/14/2022] [Indexed: 11/19/2022]
Abstract
The mechanical properties of limb long bones are impacted by bone shape and especially curvature, which is therefore likely to be of adaptive value. We use finite element analysis to compare the mechanical properties of humeri of the closely related American otter and honey badger under external loads, and to analyze the significance of bone curvature. We simulate the effects generated by loads applied in directions that differ relative to the humeral longitudinal axes, and then compare the stress characteristics with a series of humerus-inspired abstracted curved structures with increasing ratio (C/R) of eccentricity C to radius of cross section R. The humeri of the two species differ in bone curvature, with C/R of 0.6201 and 0.8752, respectively. Our analysis shows that the peak and mean stress values found within the sampling line of bone models reach a minimum when the directions of loads are 105 ± 5°, and the humerus of the American otter always experienced lower stress values than those of the honey badger in the sampling line. An analysis of stress distribution in abstract curved structures showed the greatest reduction in stress when the direction of external load was equal or greater than 95°. This suggests that the variability of the direction of external loads is an important determinant of bone curvature, and should be accounted for when assessing load carrying capacity. This study provides a basis for biomechanics research and yields insight into the form-function relationship of nature's structural elements within limbs. It potentially contributes to the design of biomimetic robots while also highlighting the functional significance of humeral bone curvature in mammals.
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Affiliation(s)
- Yanzhao Lv
- School of Mechanical and Electrical Engineering, Guilin University of Electronic Technology, Guilin, 541004, China
| | - Zupeng Zhou
- School of Mechanical and Electrical Engineering, Guilin University of Electronic Technology, Guilin, 541004, China.
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Gautreau E, Bonnet X, Sandoval J, Fosseries G, Herrel A, Arsicault M, Zeghloul S, Laribi MA. A Biomimetic Method to Replicate the Natural Fluid Movements of Swimming Snakes to Design Aquatic Robots. Biomimetics (Basel) 2022; 7:223. [PMID: 36546923 PMCID: PMC9775164 DOI: 10.3390/biomimetics7040223] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/03/2022] [Revised: 11/26/2022] [Accepted: 11/30/2022] [Indexed: 12/12/2022] Open
Abstract
Replicating animal movements with robots provides powerful research tools because key parameters can be manipulated at will. Facing the lack of standard methods and the high complexity of biological systems, an incremental bioinspired approach is required. We followed this method to design a snake robot capable of reproducing the natural swimming gait of snakes, i.e., the lateral undulations of the whole body. Our goal was to shift away from the classical broken line design of poly-articulated snake robots to mimic the far more complex fluid movements of snakes. First, we examined the musculoskeletal systems of different snake species to extract key information, such as the flexibility or stiffness of the body. Second, we gathered the swimming kinematics of living snakes. Third, we developed a toolbox to implement the data that are relevant to technical solutions. We eventually built a prototype of an artificial body (not yet fitted with motors) that successfully reproduced the natural fluid lateral undulations of snakes when they swim. This basis is an essential step for designing realistic autonomous snake robots.
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Affiliation(s)
- Elie Gautreau
- Department of GMSC, Pprime Institute, University of Poitiers, CNRS, ISAE-ENSMA, UPR 3346 Poitiers, France
| | - Xavier Bonnet
- CEBC Center of Biological Studies of Chizé, CNRS & University of La Rochelle, Villiers-en-Bois, UMR 7372 Deux-Sèvres, France
| | - Juan Sandoval
- Department of GMSC, Pprime Institute, University of Poitiers, CNRS, ISAE-ENSMA, UPR 3346 Poitiers, France
| | - Guillaume Fosseries
- CEBC Center of Biological Studies of Chizé, CNRS & University of La Rochelle, Villiers-en-Bois, UMR 7372 Deux-Sèvres, France
| | - Anthony Herrel
- MNHN National Museum of Natural History, CNRS, UMR 7179 Paris, France
| | - Marc Arsicault
- Department of GMSC, Pprime Institute, University of Poitiers, CNRS, ISAE-ENSMA, UPR 3346 Poitiers, France
| | - Saïd Zeghloul
- Department of GMSC, Pprime Institute, University of Poitiers, CNRS, ISAE-ENSMA, UPR 3346 Poitiers, France
| | - Med Amine Laribi
- Department of GMSC, Pprime Institute, University of Poitiers, CNRS, ISAE-ENSMA, UPR 3346 Poitiers, France
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29
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Bishop PJ, Brocklehurst RJ, Pierce SE. Intelligent sampling of high‐dimensional joint mobility space for analysis of articular function. Methods Ecol Evol 2022. [DOI: 10.1111/2041-210x.14016] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- Peter J. Bishop
- Museum of Comparative Zoology and Department of Organismic and Evolutionary Biology Harvard University Cambridge Massachusetts USA
- Geosciences Program, Queensland Museum Brisbane Queensland Australia
| | - Robert J. Brocklehurst
- Museum of Comparative Zoology and Department of Organismic and Evolutionary Biology Harvard University Cambridge Massachusetts USA
| | - Stephanie E. Pierce
- Museum of Comparative Zoology and Department of Organismic and Evolutionary Biology Harvard University Cambridge Massachusetts USA
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30
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Herbst EC, Eberhard EA, Hutchinson JR, Richards CT. Spherical frame projections for visualising joint range of motion, and a complementary method to capture mobility data. J Anat 2022; 241:1054-1065. [PMID: 35819977 PMCID: PMC9482700 DOI: 10.1111/joa.13717] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2022] [Revised: 05/13/2022] [Accepted: 06/06/2022] [Indexed: 12/16/2022] Open
Abstract
Quantifying joint range of motion (RoM), the reachable poses at a joint, has many applications in research and clinical care. Joint RoM measurements can be used to investigate the link between form and function in extant and extinct animals, to diagnose musculoskeletal disorders and injuries or monitor rehabilitation progress. However, it is difficult to visually demonstrate how the rotations of the joint axes interact to produce joint positions. Here, we introduce the spherical frame projection (SFP), which is a novel 3D visualisation technique, paired with a complementary data collection approach. SFP visualisations are intuitive to interpret in relation to the joint anatomy because they 'trace' the motion of the coordinate system of the distal bone at a joint relative to the proximal bone. Furthermore, SFP visualisations incorporate the interactions of degrees of freedom, which is imperative to capture the full joint RoM. For the collection of such joint RoM data, we designed a rig using conventional motion capture systems, including live audio-visual feedback on torques and sampled poses. Thus, we propose that our visualisation and data collection approach can be adapted for wide use in the study of joint function.
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Affiliation(s)
- Eva C. Herbst
- Palaeontological Institute and MuseumUniversity of ZurichZurichSwitzerland
- Structure and Motion LaboratoryRoyal Veterinary CollegeLondonUK
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31
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Baines R, Patiballa SK, Booth J, Ramirez L, Sipple T, Garcia A, Fish F, Kramer-Bottiglio R. Multi-environment robotic transitions through adaptive morphogenesis. Nature 2022; 610:283-289. [PMID: 36224418 DOI: 10.1038/s41586-022-05188-w] [Citation(s) in RCA: 36] [Impact Index Per Article: 18.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/21/2022] [Accepted: 08/03/2022] [Indexed: 11/09/2022]
Abstract
The current proliferation of mobile robots spans ecological monitoring, warehouse management and extreme environment exploration, to an individual consumer's home1-4. This expanding frontier of applications requires robots to transit multiple environments, a substantial challenge that traditional robot design strategies have not effectively addressed5,6. For example, biomimetic design-copying an animal's morphology, propulsion mechanism and gait-constitutes one approach, but it loses the benefits of engineered materials and mechanisms that can be exploited to surpass animal performance7,8. Other approaches add a unique propulsive mechanism for each environment to the same robot body, which can result in energy-inefficient designs9-11. Overall, predominant robot design strategies favour immutable structures and behaviours, resulting in systems incapable of specializing across environments12,13. Here, to achieve specialized multi-environment locomotion through terrestrial, aquatic and the in-between transition zones, we implemented 'adaptive morphogenesis', a design strategy in which adaptive robot morphology and behaviours are realized through unified structural and actuation systems. Taking inspiration from terrestrial and aquatic turtles, we built a robot that fuses traditional rigid components and soft materials to radically augment the shape of its limbs and shift its gaits for multi-environment locomotion. The interplay of gait, limb shape and the environmental medium revealed vital parameters that govern the robot's cost of transport. The results attest that adaptive morphogenesis is a powerful method to enhance the efficiency of mobile robots encountering unstructured, changing environments.
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Affiliation(s)
- Robert Baines
- School of Engineering and Applied Science, Yale University, New Haven, CT, USA
| | - Sree Kalyan Patiballa
- School of Engineering and Applied Science, Yale University, New Haven, CT, USA.,Department of Mechanical Engineering, The University of Alabama, Tuscaloosa, AL, USA
| | - Joran Booth
- School of Engineering and Applied Science, Yale University, New Haven, CT, USA
| | - Luis Ramirez
- School of Engineering and Applied Science, Yale University, New Haven, CT, USA
| | - Thomas Sipple
- School of Engineering and Applied Science, Yale University, New Haven, CT, USA
| | - Andonny Garcia
- School of Engineering and Applied Science, Yale University, New Haven, CT, USA
| | - Frank Fish
- Department of Biology, West Chester University, West Chester, PA, USA
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32
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Sellers WI, Cross CF, Fukuhara A, Ishiguro A, Hirasaki E. Producing non-steady-state gaits (starting, stopping, and turning) in a biologically realistic quadrupedal simulation. Front Ecol Evol 2022. [DOI: 10.3389/fevo.2022.954838] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
Multibody dynamic analysis (MDA) has become part of the standard toolkit used to reconstruct the biomechanics of extinct animals. However, its use is currently almost exclusively limited to steady state activities such as walking and running at constant velocity. If we want to reconstruct the full range of activities that a given morphology can achieve then we must be able to reconstruct non-steady-state activities such as starting, stopping, and turning. In this paper we demonstrate how we can borrow techniques from the robotics literature to produce gait controllers that allow us to generate non-steady-state gaits in a biologically realistic quadrupedal simulation of a chimpanzee. We use a novel proportional-derivative (PD) reach controller that can accommodate both the non-linear contraction dynamics of Hill-type muscles and the large numbers of both single-joint and two-joint muscles to allow us to define the trajectory of the distal limb segment. With defined autopodial trajectories we can then use tegotae style locomotor controllers that use decentralized reaction force feedback to control the trajectory speed in order to produce quadrupedal gait. This combination of controllers can generate starting, stopping, and turning kinematics, something that we believe has never before been achieved in a simulation that uses both physiologically realistic muscles and a high level of anatomical fidelity. The gait quality is currently relatively low compared to the more commonly used feedforward control methods, but this can almost certainly be improved in future by using more biologically based foot trajectories and increasing the complexity of the underlying model and controllers. Understanding these more complex gaits is essential, particularly in fields such as paleoanthropology where the transition from an ancestral hominoid with a diversified repertoire to a bipedal hominin is of such fundamental importance, and this approach illustrates one possible avenue for further research in this area.
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33
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Flammang BE. Bioinspired Design in Research: Evolution as Beta-Testing. Integr Comp Biol 2022; 62:icac134. [PMID: 35933125 DOI: 10.1093/icb/icac134] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Modern fishes represent over 400 million years of evolutionary processes that, in many cases, resulted in selection for phenotypes with particular performance advantages. While this certainly occurred without a trajectory for optimization, it cannot be denied that some morphologies allow organisms to be more effective than others at tasks like evading predation, securing food, and ultimately passing on their genes. In this way, evolution generates a series of iterative prototypes with varying but measurable success in accomplishing objectives. Therefore, careful analysis of fundamental properties underlying biological phenomena allow us to fast-track development of bioinspired technologies aiming to accomplish similar objectives. At the same time, bioinspired designs can be a way to explore evolutionary processes, by better understanding the performance space within which a given morphology operates. Through strong interdisciplinary collaborations, we can develop novel bioinspired technologies that not only excel as robotic devices but that teach us something about biology and the rules of life in the process.
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Affiliation(s)
- Brooke E Flammang
- Department of Biological Sciences, New Jersey Institute of Technology, 323 Dr. Martin Luther King, Jr. Blvd., 07102, NJ, USA
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34
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Tamborini M. A Plea for a New Synthesis: From Twentieth-Century Paleobiology to Twenty-First-Century Paleontology and Back Again. BIOLOGY 2022; 11:1120. [PMID: 35892976 PMCID: PMC9394316 DOI: 10.3390/biology11081120] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Received: 06/27/2022] [Revised: 07/22/2022] [Accepted: 07/24/2022] [Indexed: 11/16/2022]
Abstract
In this paper, I will briefly discuss the elements of novelty and continuity between twentieth-century paleobiology and twenty-first-century paleontology. First, I will outline the heated debate over the disciplinary status of paleontology in the mid-twentieth century. Second, I will analyze the main theoretical issue behind this debate by considering two prominent case studies within the broader paleobiology agenda. Third, I will turn to twenty-first century paleontology and address five representative research topics. In doing so, I will characterize twenty-first century paleontology as a science that strives for more data, more technology, and more integration. Finally, I will outline what twenty-first-century paleontology might inherit from twentieth-century paleobiology: the pursuit of and plea for a new synthesis that could lead to a second paleobiological revolution. Following in the footsteps of the paleobiological revolution of the 1960s and 1970s, the paleobiological revolution of the twenty-first century would enable paleontologists to gain strong political representation and argue with a decisive voice at the "high table" on issues such as the expanded evolutionary synthesis, the conservation of Earth's environment, and global climate change.
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Affiliation(s)
- Marco Tamborini
- Department of Philosophy, Technische Universität Darmstadt, Marktplatz 15 (Residenzschloss), 64283 Darmstadt, Germany
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35
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Molnar JL, Diogo R, Boisvert CA, Werneburg I. Editorial: Tetrapod water-land transition: Reconstructing soft tissue anatomy and function. Front Ecol Evol 2022. [DOI: 10.3389/fevo.2022.968979] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
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36
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Perricone V, Grun T, Raia P, Langella C. Paleomimetics: A Conceptual Framework for a Biomimetic Design Inspired by Fossils and Evolutionary Processes. Biomimetics (Basel) 2022; 7:biomimetics7030089. [PMID: 35892359 PMCID: PMC9326541 DOI: 10.3390/biomimetics7030089] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/20/2022] [Revised: 06/29/2022] [Accepted: 07/02/2022] [Indexed: 12/10/2022] Open
Abstract
In biomimetic design, functional systems, principles, and processes observed in nature are used for the development of innovative technical systems. The research on functional features is often carried out without giving importance to the generative mechanism behind them: evolution. To deeply understand and evaluate the meaning of functional morphologies, integrative structures, and processes, it is imperative to not only describe, analyse, and test their behaviour, but also to understand the evolutionary history, constraints, and interactions that led to these features. The discipline of palaeontology and its approach can considerably improve the efficiency of biomimetic transfer by analogy of function; additionally, this discipline, as well as biology, can contribute to the development of new shapes, textures, structures, and functional models for productive and generative processes useful in the improvement of designs. Based on the available literature, the present review aims to exhibit the potential contribution that palaeontology can offer to biomimetic processes, integrating specific methodologies and knowledge in a typical biomimetic design approach, as well as laying the foundation for a biomimetic design inspired by extinct species and evolutionary processes: Paleomimetics. A state of the art, definition, method, and tools are provided, and fossil entities are presented as potential role models for technical transfer solutions.
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Affiliation(s)
- Valentina Perricone
- Department of Engineering, University of Campania Luigi Vanvitelli, Via Roma 29, 81031 Aversa, Italy
- Correspondence:
| | - Tobias Grun
- Department of Invertebrate Palaeontology, University of Florida, Florida Museum, Dickinson Hall, Gainesville, FL 32611, USA;
| | - Pasquale Raia
- Department of Earth Sciences, Environment and Resources, University of Naples Federico II, Via Vicinale Cupa Cintia 26, 80126 Napoli, Italy;
| | - Carla Langella
- Department of Architecture and Industrial Design, University of Campania Luigi Vanvitelli, Via San Lorenzo, 81031 Aversa, Italy;
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37
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Coordinating tiny limbs and long bodies: Geometric mechanics of lizard terrestrial swimming. Proc Natl Acad Sci U S A 2022; 119:e2118456119. [PMID: 35759665 PMCID: PMC9271186 DOI: 10.1073/pnas.2118456119] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022] Open
Abstract
Although typically possessing four limbs and short bodies, lizards have evolved diverse morphologies, including elongate trunks with tiny limbs. Such forms are hypothesized to aid locomotion in cluttered/fossorial environments but propulsion mechanisms (e.g., the use of body and/or limbs to interact with substrates) and potential body/limb coordination remain unstudied. Here, we use biological experiments, a geometric theory of locomotion, and robophysical models to investigate body-limb coordination in diverse lizards. Locomotor field studies in short-limbed, elongate lizards (Brachymeles and Lerista) and laboratory studies of fully limbed lizards (Uma scoparia and Sceloporus olivaceus) and a snake (Chionactis occipitalis) reveal that body-wave dynamics can be described by a combination of standing and traveling waves; the ratio of the amplitudes of these components is inversely related to the degree of limb reduction and body elongation. The geometric theory (which replaces laborious calculation with diagrams) helps explain our observations, predicting that the advantage of traveling-wave body undulations (compared with a standing wave) emerges when the dominant thrust-generation mechanism arises from the body rather than the limbs and reveals that such soil-dwelling lizards propel via "terrestrial swimming" like sand-swimming lizards and snakes. We test our hypothesis by inducing the use of traveling waves in stereotyped lizards via modulating the ground-penetration resistance. Study of a limbed/undulatory robophysical model demonstrates that a traveling wave is beneficial when propulsion is generated by body-environment interaction. Our models could be valuable in understanding functional constraints on the evolutionary processes of elongation and limb reduction as well as advancing robot designs.
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38
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Fukuhara A, Gunji M, Masuda Y. Comparative anatomy of quadruped robots and animals: a review. Adv Robot 2022. [DOI: 10.1080/01691864.2022.2086018] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/01/2022]
Affiliation(s)
- Akira Fukuhara
- Research Institute of Electrical Communication, Tohoku University, Sendai, Japan
| | - Megu Gunji
- Department of Life Sciences, Faculty of Life Sciences, Toyo University, Gunma, Japan
| | - Yoichi Masuda
- Department of Mechanical Engineering, Osaka University, Osaka, Japan
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39
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Herbst EC, Manafzadeh AR, Hutchinson JR. Multi-joint analysis of pose viability supports the possibility of salamander-like hindlimb configurations in the Permian tetrapod Eryops megacephalus. Integr Comp Biol 2022; 62:139-151. [PMID: 35687000 PMCID: PMC9405718 DOI: 10.1093/icb/icac083] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2022] [Revised: 05/25/2022] [Accepted: 06/05/2022] [Indexed: 12/12/2022] Open
Abstract
Salamanders are often used as analogs for early tetrapods in paleontological reconstructions of locomotion. However, concerns have been raised about whether this comparison is justifiable, necessitating comparisons of a broader range of early tetrapods with salamanders. Here, we test whether the osteological morphology of the hindlimb in the early tetrapod (temnospondyl amphibian) Eryops megacephalus could have facilitated the sequence of limb configurations used by salamanders during terrestrial locomotion. To do so, we present a new method that enables the examination of full limb configurations rather than isolated joint poses. Based on this analysis, we conclude that E. megacephalus may indeed have been capable of salamander-like hindlimb kinematics. Our method facilitates the holistic visual comparison of limb configurations between taxa without reliance on the homology of coordinate system definitions, and can thus be applied to facilitate various comparisons between extinct and extant taxa, spanning the diversity of locomotion both past and present.
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Affiliation(s)
- Eva C Herbst
- Palaeontological Institute and Museum, University of Zurich, Karl-Schmid-Strasse 4, 8006, Zurich, Switzerland.,Department of Ecology, Evolution, and Organismal Biology, Brown University, 80 Waterman Street, 02912, Rhode Island, USA
| | - Armita R Manafzadeh
- Structure and Motion Lab, Department of Comparative Biomedical Sciences, The Royal Veterinary College, Hawkshead Lane, AL9 7TA, Hertfordshire, UK
| | - John R Hutchinson
- Department of Ecology, Evolution, and Organismal Biology, Brown University, 80 Waterman Street, 02912, Rhode Island, USA
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40
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Hebdon N, Polly PD, Peterman DJ, Ritterbush KA. Detecting Mismatch in Functional Narratives of Animal Morphology: a Test Case With Fossils. Integr Comp Biol 2022; 62:icac034. [PMID: 35660875 DOI: 10.1093/icb/icac034] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
A boom in technological advancements over the last two decades has driven a surge in both the diversity and power of analytical tools available to biomechanical and functional morphology research. However, in order to adequately investigate each of these dense datasets, one must often consider only one functional narrative at a time. There is more to each organism than any one of these form-function relationships. Joint performance landscapes determined by maximum likelihood are a valuable tool that can be used to synthesize our understanding of these multiple functional hypotheses to further explore an organism's ecology. We present an example framework for applying these tools to such a problem using the morphological transition of ammonoids from the Middle Triassic to the Early Jurassic. Across this time interval, morphospace occupation shifts from a broad occupation across Westermann Morphospace to a dense occupation of a region emphasizing an exposed umbilicus and modest frontal profile. The hydrodynamic capacities and limitations of the shell have seen intense scrutiny as a likely explanation of this transition. However, conflicting interpretations of hydrodynamic performance remain despite this scrutiny, with scant offerings of alternative explanations. Our analysis finds that hydrodynamic measures of performance do little to explain the shift in morphological occupation, highlighting a need for a more robust investigation of alternative functional hypotheses that are often intellectually set aside. With this we show a framework for consolidating the current understanding of the form-function relationships in an organism, and assess when they are insufficiently characterizing the dynamics those data are being used to explain. We aim to encourage the broader adoption of this framework and these ideas as a foundation to bring the field close to comprehensive synthesis and reconstruction of organisms.
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Affiliation(s)
- Nicholas Hebdon
- Dept. of Biological Sciences, Chapman University, Keck Center, 450 North Center Street, Orange, CA, 92866
| | - P David Polly
- Departments of Earth & Atmospheric Science, Biology, and Anthropology, Indiana University, Bloomington, IN, 47405, USA
| | - David Joseph Peterman
- Dept. Geology and Geophysics, University of Utah, Frederick Albert Sutton Building, 115 S 1460 E, Salt Lake City, UT 84112-0102
| | - Kathleen A Ritterbush
- Dept. Geology and Geophysics, University of Utah, Frederick Albert Sutton Building, 115 S 1460 E, Salt Lake City, UT 84112-0102
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41
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Cuff AR, Demuth OE, Michel K, Otero A, Pintore R, Polet DT, Wiseman ALA, Hutchinson JR. Walking-and Running and Jumping-with Dinosaurs and Their Cousins, Viewed Through the Lens of Evolutionary Biomechanics. Integr Comp Biol 2022; 62:icac049. [PMID: 35595475 DOI: 10.1093/icb/icac049] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
Archosauria diversified throughout the Triassic Period before experiencing two mass extinctions near its end ∼201 Mya, leaving only the crocodile-lineage (Crocodylomorpha) and bird-lineage (Dinosauria) as survivors; along with the pterosaurian flying reptiles. About 50 years ago, the "locomotor superiority hypothesis" (LSH) proposed that dinosaurs ultimately dominated by the Early Jurassic Period because their locomotion was superior to other archosaurs'. This idea has been debated continuously since, with taxonomic and morphological analyses suggesting dinosaurs were "lucky" rather than surviving due to being biologically superior. However, the LSH has never been tested biomechanically. Here we present integration of experimental data from locomotion in extant archosaurs with inverse and predictive simulations of the same behaviours using musculoskeletal models, showing that we can reliably predict how extant archosaurs walk, run and jump. These simulations have been guiding predictive simulations of extinct archosaurs to estimate how they moved, and we show our progress in that endeavour. The musculoskeletal models used in these simulations can also be used for simpler analyses of form and function such as muscle moment arms, which inform us about more basic biomechanical similarities and differences between archosaurs. Placing all these data into an evolutionary and biomechanical context, we take a fresh look at the LSH as part of a critical review of competing hypotheses for why dinosaurs (and a few other archosaur clades) survived the Late Triassic extinctions. Early dinosaurs had some quantifiable differences in locomotor function and performance vs. some other archosaurs, but other derived dinosaurian features (e.g., metabolic or growth rates, ventilatory abilities) are not necessarily mutually exclusive from the LSH; or maybe even an opportunistic replacement hypothesis; in explaining dinosaurs' success.
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Affiliation(s)
- A R Cuff
- Structure and Motion Laboratory, Department of Comparative Biomedical Sciences, Royal Veterinary College, United Kingdom
- Human Anatomy Resource Centre, University of Liverpool, Liverpool, United Kingdom
| | - O E Demuth
- Structure and Motion Laboratory, Department of Comparative Biomedical Sciences, Royal Veterinary College, United Kingdom
- Department of Earth Sciences, University of Cambridge, United Kingdom
| | - K Michel
- Structure and Motion Laboratory, Department of Comparative Biomedical Sciences, Royal Veterinary College, United Kingdom
| | - A Otero
- CONICET - División Paleontología de Vertebrados, Facultad de Ciencias Naturales y Museo, Anexo Laboratorios, La Plata, Argentina
| | - R Pintore
- Structure and Motion Laboratory, Department of Comparative Biomedical Sciences, Royal Veterinary College, United Kingdom
- Mécanismes adaptatifs et évolution (MECADEV) / UMR 7179, CNRS / Muséum National d'Histoire Naturelle, France
| | - D T Polet
- Structure and Motion Laboratory, Department of Comparative Biomedical Sciences, Royal Veterinary College, United Kingdom
| | - A L A Wiseman
- Structure and Motion Laboratory, Department of Comparative Biomedical Sciences, Royal Veterinary College, United Kingdom
- McDonald Institute for Archaeological Research, University of Cambridge, United Kingdom
| | - J R Hutchinson
- Structure and Motion Laboratory, Department of Comparative Biomedical Sciences, Royal Veterinary College, United Kingdom
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42
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Abel P, Pommery Y, Ford DP, Koyabu D, Werneburg I. Skull Sutures and Cranial Mechanics in the Permian Reptile Captorhinus aguti and the Evolution of the Temporal Region in Early Amniotes. Front Ecol Evol 2022. [DOI: 10.3389/fevo.2022.841784] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
While most early limbed vertebrates possessed a fully-roofed dermatocranium in their temporal skull region, temporal fenestrae and excavations evolved independently at least twice in the earliest amniotes, with several different variations in shape and position of the openings. Yet, the specific drivers behind this evolution have been only barely understood. It has been mostly explained by adaptations of the feeding apparatus as a response to new functional demands in the terrestrial realm, including a rearrangement of the jaw musculature as well as changes in strain distribution. Temporal fenestrae have been retained in most extant amniotes but have also been lost again, notably in turtles. However, even turtles do not represent an optimal analog for the condition in the ancestral amniote, highlighting the necessity to examine Paleozoic fossil material. Here, we describe in detail the sutures in the dermatocranium of the Permian reptile Captorhinus aguti (Amniota, Captorhinidae) to illustrate bone integrity in an early non-fenestrated amniote skull. We reconstruct the jaw adductor musculature and discuss its relation to intracranial articulations and bone flexibility within the temporal region. Lastly, we examine whether the reconstructed cranial mechanics in C. aguti could be treated as a model for the ancestor of fenestrated amniotes. We show that C. aguti likely exhibited a reduced loading in the areas at the intersection of jugal, squamosal, and postorbital, as well as at the contact between parietal and postorbital. We argue that these “weak” areas are prone for the development of temporal openings and may be treated as the possible precursors for infratemporal and supratemporal fenestrae in early amniotes. These findings provide a good basis for future studies on other non-fenestrated taxa close to the amniote base, for example diadectomorphs or other non-diapsid reptiles.
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43
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Scheidt A, Ditzel PC, Geiger SM, Wagner FC, Mülling CKW, Nyakatura JA. A therian mammal with sprawling kinematics? Gait and 3D forelimb X-ray motion analysis in tamanduas. J Exp Biol 2022; 225:275397. [PMID: 35554550 DOI: 10.1242/jeb.243625] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/20/2021] [Accepted: 05/08/2022] [Indexed: 10/18/2022]
Abstract
Therian mammals are known to move their forelimbs in a parasagittal plane, retracting the mobilised scapula during stance phase. Non-cursorial therian mammals often abduct the elbow out of the shoulder-hip parasagittal plane. This is especially prominent in Tamandua (Xenarthra), which suggests they employ aspects of sprawling (e.g., lizard-like-) locomotion. Here, we test if tamanduas use sprawling forelimb kinematics, i.e., a largely immobile scapula with pronounced lateral spine bending and long-axis rotation of the humerus. We analyse high speed videos and use X-ray motion analysis of tamanduas walking and balancing on branches of varying inclinations and provide a quantitative characterization of gaits and forelimb kinematics. Tamanduas displayed lateral sequence lateral-couplets gaits on flat ground and horizontal branches, but increased diagonality on steeper in- and declines, resulting in lateral sequence diagonal-couplets gaits. This result provides further evidence for high diagonality in arboreal species, likely maximising stability in arboreal environments. Further, the results reveal a mosaic of sprawling and parasagittal kinematic characteristics. The abducted elbow results from a constantly internally rotated scapula about its long axis and a retracted humerus. Scapula retraction contributes considerably to stride length. However, lateral rotation in the pectoral region of the spine (range: 21°) is higher than reported for other therian mammals. Instead, it is similar to skinks and alligators, indicating an aspect generally associated with sprawling locomotion is characteristic for forelimb kinematics of tamanduas. Our study contributes to a growing body of evidence of highly variable non-cursorial therian mammal locomotor kinematics.
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Affiliation(s)
- Adrian Scheidt
- AG Vergleichende Zoologie, Institut für Biologie, Humboldt Universität zu Berlin, Philippstraße 13, 10115 Berlin, Germany
| | - Paulo C Ditzel
- AG Vergleichende Zoologie, Institut für Biologie, Humboldt Universität zu Berlin, Philippstraße 13, 10115 Berlin, Germany
| | - Sandra M Geiger
- Institute of Veterinary Anatomy, Histology and Embryology, Leipzig University, An den Tierkliniken 43, 04103 Leipzig, Germany
| | - Franziska C Wagner
- Institute of Veterinary Anatomy, Histology and Embryology, Leipzig University, An den Tierkliniken 43, 04103 Leipzig, Germany
| | - Christoph K W Mülling
- Institute of Veterinary Anatomy, Histology and Embryology, Leipzig University, An den Tierkliniken 43, 04103 Leipzig, Germany
| | - John A Nyakatura
- AG Vergleichende Zoologie, Institut für Biologie, Humboldt Universität zu Berlin, Philippstraße 13, 10115 Berlin, Germany
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44
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Dickinson E, Hanna CS, Fischer HM, Davoli EC, Currier AA, Granatosky MC. Locomotor energetics in the Indonesian blue-tongued skink (Tiliqua gigas) with implications for the cost of belly-dragging in early tetrapods. JOURNAL OF EXPERIMENTAL ZOOLOGY. PART A, ECOLOGICAL AND INTEGRATIVE PHYSIOLOGY 2022; 337:329-336. [PMID: 34914867 DOI: 10.1002/jez.2569] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/21/2021] [Revised: 11/17/2021] [Accepted: 11/24/2021] [Indexed: 12/19/2022]
Abstract
During the last decade, biomechanical and kinematic studies have suggested that a belly-dragging gait may have represented a critical locomotor stage during tetrapod evolution. This form of locomotion is hypothesized to facilitate animals to move on land with relatively weaker pectoral muscles. The Indonesian blue-tongued skink (Tiliqua gigas) is known for its belly-dragging locomotion and is thought to employ many of the same spatiotemporal gait characteristics of stem tetrapods. Conversely, the savannah monitor (Varanus exanthematicus) employs a raised quadrupedal gait. Thus, differences in the energetic efficiency of locomotion between these taxa may elucidate the role of energetic optimization in driving gait shifts in early tetrapods. Five Tiliqua and four Varanus were custom-fitted for 3D printed helmets that, combined with a Field Metabolic System, were used to collect open-flow respirometry data including O2 consumption, CO2 production, water vapor pressure, barometric pressure, room temperature, and airflow rates. Energetic data were collected for each species at rest, and when walking at three different speeds. Energetic consumption in each taxon increased at greater speeds. On a per-stride basis, energetic costs appear similar between taxa. However, significant differences were observed interspecifically in terms of net cost of transport. Overall, energy expenditure was ~20% higher in Tiliqua at equivalent speeds, suggesting that belly-dragging does impart a tangible energetic cost during quadrupedal locomotion. This cost, coupled with the other practical constraints of belly-dragging (e.g., restricting top-end speed and reducing maneuverability in complex terrains) may have contributed to the adoption of upright quadrupedal walking throughout tetrapod locomotor evolution.
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Affiliation(s)
- Edwin Dickinson
- Department of Anatomy, New York Institute of Technology College of Osteopathic Medicine, Old Westbury, New York, USA
| | - Christopher S Hanna
- New York Institute of Technology College of Osteopathic Medicine, Old Westbury, New York, USA
| | - Hannah M Fischer
- New York Institute of Technology College of Osteopathic Medicine, Old Westbury, New York, USA
| | - Elizabeth C Davoli
- New York Institute of Technology College of Osteopathic Medicine, Old Westbury, New York, USA
| | - Allen A Currier
- New York Institute of Technology College of Osteopathic Medicine, Old Westbury, New York, USA
| | - Michael C Granatosky
- Department of Anatomy, New York Institute of Technology College of Osteopathic Medicine, Old Westbury, New York, USA.,Center for Biomedical Innovation, New York Institute of Technology College of Osteopathic Medicine, Old Westbury, New York, USA
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45
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Xia N, Jin B, Jin D, Yang Z, Pan C, Wang Q, Ji F, Iacovacci V, Majidi C, Ding Y, Zhang L. Decoupling and Reprogramming the Wiggling Motion of Midge Larvae Using a Soft Robotic Platform. ADVANCED MATERIALS (DEERFIELD BEACH, FLA.) 2022; 34:e2109126. [PMID: 35196405 DOI: 10.1002/adma.202109126] [Citation(s) in RCA: 11] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/11/2021] [Revised: 02/06/2022] [Indexed: 06/14/2023]
Abstract
The efficient motility of invertebrates helps them survive under evolutionary pressures. Reconstructing the locomotion of invertebrates and decoupling the influence of individual basic motion are crucial for understanding their underlying mechanisms, which, however, generally remain a challenge due to the complexity of locomotion gaits. Herein, a magnetic soft robot to reproduce midge larva's key natural swimming gaits is developed, and the coupling effect between body curling and rotation on motility is investigated. Through the authors' systematically decoupling studies using programmed magnetic field inputs, the soft robot (named LarvaBot) experiences various coupled gaits, including biomimetic side-to-side flexures, and unveils that the optimal rotation amplitude and the synchronization of curling and rotation greatly enhance its motility. The LarvaBot achieves fast locomotion and upstream capability at the moderate Reynolds number regime. The soft robotics-based platform provides new insight to decouple complex biological locomotion, and design programmed swimming gaits for the fast locomotion of soft-bodied swimmers.
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Affiliation(s)
- Neng Xia
- Department of Mechanical and Automation Engineering, The Chinese University of Hong Kong, Hong Kong SAR, 999077, China
| | - Bowen Jin
- Beijing Computational Science Research Center, Haidian District, Beijing, 100193, China
| | - Dongdong Jin
- Department of Mechanical and Automation Engineering, The Chinese University of Hong Kong, Hong Kong SAR, 999077, China
| | - Zhengxin Yang
- Department of Mechanical and Automation Engineering, The Chinese University of Hong Kong, Hong Kong SAR, 999077, China
| | - Chengfeng Pan
- Department of Mechanical and Automation Engineering, The Chinese University of Hong Kong, Hong Kong SAR, 999077, China
| | - Qianqian Wang
- Department of Mechanical and Automation Engineering, The Chinese University of Hong Kong, Hong Kong SAR, 999077, China
| | - Fengtong Ji
- Department of Mechanical and Automation Engineering, The Chinese University of Hong Kong, Hong Kong SAR, 999077, China
| | - Veronica Iacovacci
- Department of Mechanical and Automation Engineering, The Chinese University of Hong Kong, Hong Kong SAR, 999077, China
- The BioRobotics Institute, Scuola Superiore Sant'Anna, Pisa, 56025, Italy
| | - Carmel Majidi
- Soft Machines Lab, Carnegie Mellon University, Pittsburgh, PA, 15213, USA
| | - Yang Ding
- Beijing Computational Science Research Center, Haidian District, Beijing, 100193, China
| | - Li Zhang
- Department of Mechanical and Automation Engineering, The Chinese University of Hong Kong, Hong Kong SAR, 999077, China
- Chow Yuk Ho Technology Center for Innovative Medicine, The Chinese University of Hong Kong, Hong Kong SAR, 999077, China
- CUHK T Stone Robotics Institute, The Chinese University of Hong Kong, Hong Kong SAR, 999077, China
- Department of Surgery, The Chinese University of Hong Kong, Hong Kong SAR, 999077, China
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46
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Crawford CH, Webber-Schultz A, Hart PB, Randall ZS, Cerrato-Morales C, Kellogg AB, Amplo HE, Suvarnaraksha A, Page LM, Chakrabarty P, Flammang BE. They like to move it (move it): walking kinematics of balitorid loaches of Thailand. J Exp Biol 2022; 225:274826. [PMID: 35322854 DOI: 10.1242/jeb.242906] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/02/2021] [Accepted: 02/16/2022] [Indexed: 12/16/2022]
Abstract
Balitorid loaches are a family of fishes that exhibit morphological adaptations to living in fast flowing water, including an enlarged sacral rib that creates a 'hip'-like skeletal connection between the pelvis and the axial skeleton. The presence of this sacral rib, the robustness of which varies across the family, is hypothesized to facilitate terrestrial locomotion seen in the family. Terrestrial locomotion in balitorids is unlike that of any known fish: the locomotion resembles that of terrestrial tetrapods. Emergence and convergence of terrestrial locomotion from water to land has been studied in fossils; however, studying balitorid walking provides a present-day natural laboratory to examine the convergent evolution of walking movements. We tested the hypothesis that balitorid species with more robust connections between the pelvic and axial skeleton (M3 morphotype) are more effective at walking than species with reduced connectivity (M1 morphotype). We predicted that robust connections would facilitate travel per step and increase mass support during movement. We collected high-speed video of walking in seven balitorid species to analyze kinematic variables. The connection between internal anatomy and locomotion on land are revealed herein with digitized video analysis, μCT scans, and in the context of the phylogenetic history of this family of fishes. Our species sampling covered the extremes of previously identified sacral rib morphotypes, M1 and M3. Although we hypothesized the robustness of the sacral rib to have a strong influence on walking performance, there was not a large reduction in walking ability in the species with the least modified rib (M1). Instead, walking kinematics varied between the two balitorid subfamilies with a generally more 'walk-like' behavior in the Balitorinae and more 'swim-like' behavior in the Homalopteroidinae. The type of terrestrial locomotion displayed in balitorids is unique among living fishes and aids in our understanding of the extent to which a sacral connection facilitates terrestrial walking.
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Affiliation(s)
- Callie H Crawford
- Department of Biological Sciences, New Jersey Institute of Technology, Newark, NJ 07102, USA.,Department of Biology, University of Louisiana at Lafayette, Lafayette, LA 70503, USA
| | - Amani Webber-Schultz
- Department of Biological Sciences, New Jersey Institute of Technology, Newark, NJ 07102, USA
| | - Pamela B Hart
- Sam Noble Museum of Natural History, the University of Oklahoma, Norman, OK 73072, USA.,Museum of Natural Science, Louisiana State University, Baton Rouge, LA 70802, USA
| | - Zachary S Randall
- Florida Museum of Natural History, University of Florida, Gainesville, FL 32611, USA
| | - Cristian Cerrato-Morales
- Department of Earth and Environmental Sciences, Rutgers, the State University of New Jersey, Newark, NJ 07102, USA
| | - Audrey B Kellogg
- Department of Biological Sciences, New Jersey Institute of Technology, Newark, NJ 07102, USA
| | - Haley E Amplo
- Department of Earth and Environmental Sciences, Rutgers, the State University of New Jersey, Newark, NJ 07102, USA
| | - Apinun Suvarnaraksha
- Faculty of Fisheries Technology and Aquatic Resources, Maejo University, Chiang Mai 50290, Thailand
| | - Lawrence M Page
- Florida Museum of Natural History, University of Florida, Gainesville, FL 32611, USA
| | - Prosanta Chakrabarty
- Museum of Natural Science, Louisiana State University, Baton Rouge, LA 70802, USA
| | - Brooke E Flammang
- Department of Biological Sciences, New Jersey Institute of Technology, Newark, NJ 07102, USA
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47
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Kawano SM, Blob RW. Terrestrial force production by the limbs of a semi-aquatic salamander provides insight into the evolution of terrestrial locomotor mechanics. J Exp Biol 2022; 225:274955. [DOI: 10.1242/jeb.242795] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/01/2021] [Accepted: 03/04/2022] [Indexed: 11/20/2022]
Abstract
Amphibious fishes and salamanders are valuable functional analogs for vertebrates that spanned the water-to-land transition. However, investigations of walking mechanics have focused on terrestrial salamanders and, thus, may better reflect the capabilities of stem tetrapods that were already terrestrial. The earliest tetrapods were likely aquatic, so salamanders that are not primarily terrestrial may yield more appropriate data for modelling the incipient stages of terrestrial locomotion. In the present study, locomotor biomechanics were quantified from semi-aquatic Pleurodeles waltl, a salamander that spends most of its adult life in water, and then compared to a primarily terrestrial salamander (Ambystoma tigrinum) and semi-aquatic fish (Periophthalmus barbarus) to evaluate whether terrestrial locomotion was more comparable between species with ecological versus phylogenetic similarities. Ground reaction forces (GRFs) from individual limbs or fins indicated that the pectoral appendages of each taxon had distinct patterns of force production, but GRFs from the hind limbs were comparable between the salamander species. The rate that force is produced can affect musculoskeletal function, so we also calculated ‘yank’ (first time derivative of force) to quantify the dynamics of GRF production. Yank was sometimes slower in P. waltl but there were some similarities between the three species. Finally, the semi-aquatic taxa (P. waltl and P. barbarus) had a more medial inclination of the GRF compared to terrestrial salamanders, potentially elevating bone stresses among more aquatic taxa and limiting their excursions onto land.
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Affiliation(s)
- Sandy M. Kawano
- Department of Biological Sciences, The George Washington University, Washington, D.C. 20052, USA
| | - Richard W. Blob
- Department of Biological Sciences, Clemson University, Clemson, SC 29634, USA
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48
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Granatosky MC, McElroy EJ. Stride frequency or length? A phylogenetic approach to understand how animals regulate locomotor speed. J Exp Biol 2022; 225:274352. [PMID: 35258613 DOI: 10.1242/jeb.243231] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2021] [Accepted: 01/17/2022] [Indexed: 12/11/2022]
Abstract
Speed regulation in animals involves stride frequency and stride length. While the relationship between these variables has been well documented, it remains unresolved whether animals primarily modify stride frequency or stride length to increase speed. In this study, we explored the interrelationships between these three variables across a sample of 103 tetrapods and assessed whether speed regulation strategy is influenced by mechanical, allometric, phylogenetic or ecological factors. We observed that crouched terrestrial species tend to regulate speed through stride frequency. Such a strategy is energetically costly, but results in greater locomotor maneuverability and greater stability. In contrast, regulating speed through stride length is closely tied to larger arboreal animals with relatively extended limbs. Such movements reduce substrate oscillations on thin arboreal supports and/or helps to reduce swing phase costs. The slope of speed on frequency is lower in small crouched animals than in large-bodied erect species. As a result, substantially more rapid limb movements are matched with only small speed increases in crouched, small-bodied animals. Furthermore, the slope of speed on stride length was inversely proportional to body mass. As such, small changes in stride length can result in relatively rapid speed increases for small-bodied species. These results are somewhat counterintuitive, in that larger species, which have longer limbs and take longer strides, do not appear to gain as much speed increase out of lengthening their stride. Conversely, smaller species that cycle their limbs rapidly do not gain as much speed out of increasing stride frequency as do larger species.
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Affiliation(s)
- Michael C Granatosky
- Department of Anatomy, College of Osteopathic Medicine, New York Institute of Technology, Old Westbury, NY 11568, USA.,Center for Biomedical Innovation, New York Institute of Technology College of Osteopathic Medicine, Old Westbury, NY 11568, USA
| | - Eric J McElroy
- Department of Biology, College of Charleston, Charleston, SC 29424, USA
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49
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McElroy EJ, Granatosky MC. The evolution of asymmetrical gaits in gnathostome vertebrates. J Exp Biol 2022; 225:274299. [PMID: 35258610 DOI: 10.1242/jeb.243235] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/26/2021] [Accepted: 01/12/2022] [Indexed: 11/20/2022]
Abstract
The difficulty of quantifying asymmetrical limb movements, compared with symmetrical gaits, has resulted in a dearth of information concerning the mechanics and adaptive benefits of these locomotor patterns. Further, no study has explored the evolutionary history of asymmetrical gaits using phylogenetic comparative techniques. Most foundational work suggests that symmetrical gaits are an ancestral feature and asymmetrical gaits are a more derived feature of mammals, some crocodilians, some turtles, anurans and some fish species. In this study, we searched the literature for evidence of the use of asymmetrical gaits across extant gnathostomes, and from this sample (n=308 species) modeled the evolution of asymmetrical gaits assuming four different scenarios. Our analysis shows strongest support for an evolutionary model where asymmetrical gaits are ancestral for gnathostomes during benthic walking and could be both lost and gained during subsequent gnathostome evolution. We were unable to reconstruct the presence/absence of asymmetrical gaits at the tetrapod, amniote, turtle and crocodilian nodes with certainty. The ability to adopt asymmetrical gaits was likely ancestral for Mammalia but was probably not ancestral for Amphibia and Lepidosauria. The absence of asymmetrical gaits in certain lineages may be attributable to neuromuscular and/or anatomical constraints and/or generally slow movement not associated with these gaits. This finding adds to the growing body of work showing the early gnathostomes and tetrapods may have used a diversity of gaits, including asymmetrical patterns of limb cycling.
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Affiliation(s)
- Eric J McElroy
- Department of Biology, College of Charleston, Charleston, SC 29424, USA
| | - Michael C Granatosky
- Department of Anatomy, College of Osteopathic Medicine, New York Institute of Technology, Old Westbury, NY, USA.,Center for Biomedical Innovation, New York Institute of Technology College of Osteopathic Medicine, Old Westbury, NY 11545, USA
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50
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Weihmann T. The Smooth Transition From Many-Legged to Bipedal Locomotion—Gradual Leg Force Reduction and its Impact on Total Ground Reaction Forces, Body Dynamics and Gait Transitions. Front Bioeng Biotechnol 2022; 9:769684. [PMID: 35186911 PMCID: PMC8855104 DOI: 10.3389/fbioe.2021.769684] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/02/2021] [Accepted: 12/20/2021] [Indexed: 11/29/2022] Open
Abstract
Most terrestrial animals move with a specific number of propulsive legs, which differs between clades. The reasons for these differences are often unknown and rarely queried, despite the underlying mechanisms being indispensable for understanding the evolution of multilegged locomotor systems in the animal kingdom and the development of swiftly moving robots. Moreover, when speeding up, a range of species change their number of propulsive legs. The reasons for this behaviour have proven equally elusive. In animals and robots, the number of propulsive legs also has a decisive impact on the movement dynamics of the centre of mass. Here, I use the leg force interference model to elucidate these issues by introducing gradually declining ground reaction forces in locomotor apparatuses with varying numbers of leg pairs in a first numeric approach dealing with these measures’ impact on locomotion dynamics. The effects caused by the examined changes in ground reaction forces and timing thereof follow a continuum. However, the transition from quadrupedal to a bipedal locomotor system deviates from those between multilegged systems with different numbers of leg pairs. Only in quadrupeds do reduced ground reaction forces beneath one leg pair result in increased reliability of vertical body oscillations and therefore increased energy efficiency and dynamic stability of locomotion.
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