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Baker DV, Bernal-Escalante J, Traaseth C, Wang Y, Tran MV, Keenan S, Algar WR. Smartphones as a platform for molecular analysis: concepts, methods, devices and future potential. LAB ON A CHIP 2025; 25:884-955. [PMID: 39918205 DOI: 10.1039/d4lc00966e] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/26/2025]
Abstract
Over the past 15 years, smartphones have had a transformative effect on everyday life. These devices also have the potential to transform molecular analysis over the next 15 years. The cameras of a smartphone, and its many additional onboard features, support optical detection and other aspects of engineering an analytical device. This article reviews the development of smartphones as platforms for portable chemical and biological analysis. It is equal parts conceptual overview, technical tutorial, critical summary of the state of the art, and outlook on how to advance smartphones as a tool for analysis. It further discusses the motivations for adopting smartphones as a portable platform, summarizes their enabling features and relevant optical detection methods, then highlights complementary technologies and materials such as 3D printing, microfluidics, optoelectronics, microelectronics, and nanoparticles. The broad scope of research and key advances from the past 7 years are reviewed as a prelude to a perspective on the challenges and opportunities for translating smartphone-based lab-on-a-chip devices from prototypes to authentic applications in health, food and water safety, environmental monitoring, and beyond. The convergence of smartphones with smart assays and smart apps powered by machine learning and artificial intelligence holds immense promise for realizing a future for molecular analysis that is powerful, versatile, democratized, and no longer just the stuff of science fiction.
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Affiliation(s)
- Daina V Baker
- Department of Chemistry, University of British Columbia, 2036 Main Mall, Vancouver, BC, V6T 1Z1, Canada.
| | - Jasmine Bernal-Escalante
- Department of Chemistry, University of British Columbia, 2036 Main Mall, Vancouver, BC, V6T 1Z1, Canada.
| | - Christine Traaseth
- Department of Chemistry, University of British Columbia, 2036 Main Mall, Vancouver, BC, V6T 1Z1, Canada.
| | - Yihao Wang
- Department of Chemistry, University of British Columbia, 2036 Main Mall, Vancouver, BC, V6T 1Z1, Canada.
| | - Michael V Tran
- Department of Chemistry, University of British Columbia, 2036 Main Mall, Vancouver, BC, V6T 1Z1, Canada.
| | - Seth Keenan
- Department of Chemistry, University of British Columbia, 2036 Main Mall, Vancouver, BC, V6T 1Z1, Canada.
| | - W Russ Algar
- Department of Chemistry, University of British Columbia, 2036 Main Mall, Vancouver, BC, V6T 1Z1, Canada.
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2
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Mudugamuwa A, Roshan U, Hettiarachchi S, Cha H, Musharaf H, Kang X, Trinh QT, Xia HM, Nguyen N, Zhang J. Periodic Flows in Microfluidics. SMALL (WEINHEIM AN DER BERGSTRASSE, GERMANY) 2024; 20:e2404685. [PMID: 39246195 PMCID: PMC11636114 DOI: 10.1002/smll.202404685] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/08/2024] [Revised: 08/24/2024] [Indexed: 09/10/2024]
Abstract
Microfluidics, the science and technology of manipulating fluids in microscale channels, offers numerous advantages, such as low energy consumption, compact device size, precise control, fast reaction, and enhanced portability. These benefits have led to applications in biomedical assays, disease diagnostics, drug discovery, neuroscience, and so on. Fluid flow within microfluidic channels is typically in the laminar flow region, which is characterized by low Reynolds numbers but brings the challenge of efficient mixing of fluids. Periodic flows are time-dependent fluid flows, featuring repetitive patterns that can significantly improve fluid mixing and extend the effective length of microchannels for submicron and nanoparticle manipulation. Besides, periodic flow is crucial in organ-on-a-chip (OoC) for accurately modeling physiological processes, advancing disease understanding, drug development, and personalized medicine. Various techniques for generating periodic flows have been reported, including syringe pumps, peristalsis, and actuation based on electric, magnetic, acoustic, mechanical, pneumatic, and fluidic forces, yet comprehensive reviews on this topic remain limited. This paper aims to provide a comprehensive review of periodic flows in microfluidics, from fundamental mechanisms to generation techniques and applications. The challenges and future perspectives are also discussed to exploit the potential of periodic flows in microfluidics.
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Affiliation(s)
- Amith Mudugamuwa
- Queensland Micro and Nanotechnology CentreGriffith UniversityBrisbaneQLD4111Australia
| | - Uditha Roshan
- Queensland Micro and Nanotechnology CentreGriffith UniversityBrisbaneQLD4111Australia
| | - Samith Hettiarachchi
- Queensland Micro and Nanotechnology CentreGriffith UniversityBrisbaneQLD4111Australia
| | - Haotian Cha
- Queensland Micro and Nanotechnology CentreGriffith UniversityBrisbaneQLD4111Australia
| | - Hafiz Musharaf
- Queensland Micro and Nanotechnology CentreGriffith UniversityBrisbaneQLD4111Australia
| | - Xiaoyue Kang
- Queensland Micro and Nanotechnology CentreGriffith UniversityBrisbaneQLD4111Australia
| | - Quang Thang Trinh
- Queensland Micro and Nanotechnology CentreGriffith UniversityBrisbaneQLD4111Australia
| | - Huan Ming Xia
- School of Mechanical EngineeringNanjing University of Science and TechnologyNanjing210094P. R. China
| | - Nam‐Trung Nguyen
- Queensland Micro and Nanotechnology CentreGriffith UniversityBrisbaneQLD4111Australia
| | - Jun Zhang
- Queensland Micro and Nanotechnology CentreGriffith UniversityBrisbaneQLD4111Australia
- School of Engineering and Built EnvironmentGriffith UniversityBrisbaneQLD4111Australia
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3
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Kalafatis A, Theofylaktos L, Stergiopoulos T. Spin coating on a budget: A 3D-Printed all-mechanical alternative for cost-effective thin-film deposition. HARDWAREX 2024; 19:e00547. [PMID: 39669797 PMCID: PMC11637174 DOI: 10.1016/j.ohx.2024.e00547] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/20/2024] [Revised: 06/11/2024] [Accepted: 06/15/2024] [Indexed: 12/14/2024]
Abstract
Spin coating stands out as the most employed thin-film deposition technique across a variety of scientific fields. Particularly in the past two decades, spin coaters have become increasingly popular due to the emergence of solution-processed semiconductors such as quantum dots and perovskites. However, acquiring commercial spin coaters from reputable suppliers remains a significant financial burden for many laboratories, particularly for smaller research or educational facilities. Prompted by the simple mechanical principles of the device, in this work, we present a 3D-printed analogue that can be printed and assembled in under 10 h and costs less than 5 euros per device. The operating principle is fully mechanical since the rotating motion is induced by gas flow. It does not require any additional components such as DC motors, motor drivers, circuitry or software and thus it can be fully operational off the grid. Additionally, the gas flow generates a purging effect that was found to be rather advantageous for film formation. To prove the effectiveness of this device, we have employed it to fabricate planar thin-film antimony sulfide (Sb2 S3 ) solar cells. The optoelectronic characteristics of solar cells revealed noteworthy improvements, particularly in terms of repeatability, when compared to those fabricated with a commercial spin coater.
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Affiliation(s)
- Apostolos Kalafatis
- Institute of Nanoscience and Nanotechnology, National Center for Scientific Research “Demokritos”, Aghia Paraskevi, Athens 15341, Greece
| | - Lazaros Theofylaktos
- Institute of Nanoscience and Nanotechnology, National Center for Scientific Research “Demokritos”, Aghia Paraskevi, Athens 15341, Greece
- Department of Chemistry, Aristotle University of Thessaloniki, 54124 Thessaloniki, Greece
| | - Thomas Stergiopoulos
- Institute of Nanoscience and Nanotechnology, National Center for Scientific Research “Demokritos”, Aghia Paraskevi, Athens 15341, Greece
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4
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Wells KCDH, Kharma N, Jaunky BB, Nie K, Aguiar-Tawil G, Berry D. BioCloneBot: A versatile, low-cost, and open-source automated liquid handler. HARDWAREX 2024; 18:e00516. [PMID: 38524156 PMCID: PMC10955647 DOI: 10.1016/j.ohx.2024.e00516] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/23/2023] [Revised: 02/03/2024] [Accepted: 02/25/2024] [Indexed: 03/26/2024]
Abstract
Liquid handler systems can provide significant benefits to researchers by automating laboratory work, however, their unaffordable price provides a steep barrier to entry. Therefore, we provide the BioCloneBot, a versatile, low-cost, and open-source automated liquid handler. This system can be easily built with 3D-printed parts and readily available commercial components. The BioCloneBot is highly adaptive to user needs and facilitates various liquid handling tasks in research and diagnostics. Its user-friendly interface and programmable nature make it suitable for a wide range of applications, from small-scale experiments to larger laboratory setups. By utilizing BioCloneBot, researchers and scientists can streamline their liquid handling processes without the financial constraints posed by traditional systems. In this paper, we detail the design, construction, and validation of BioCloneBot, showcasing its precise control, accuracy, and repeatability in various liquid handling tasks. The open-source nature of the system encourages collaboration and customization, enabling researchers to contribute and adapt the technology to specific experimental requirements.
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Affiliation(s)
- Ke’Koa CDH Wells
- Department of Electrical and Computer Engineering, Concordia University, Montréal, Québec, Canada
| | - Nawwaf Kharma
- Department of Electrical and Computer Engineering, Concordia University, Montréal, Québec, Canada
- Department of Biology, Concordia University, Montréal, Québec, Canada
| | - Brandon B. Jaunky
- Department of Biology, Concordia University, Montréal, Québec, Canada
| | - Kaiyu Nie
- Department of Electrical and Computer Engineering, Concordia University, Montréal, Québec, Canada
| | | | - Daniel Berry
- Department of Mechanical, Industrial and Aerospace Engineering, Concordia University, Montréal, Québec, Canada
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5
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DeAngelis MA, Ruder WC, LeDuc PR. An embedded microfluidic valve for dynamic control of cellular communication. APPLIED PHYSICS LETTERS 2023; 123:244103. [PMID: 38094664 PMCID: PMC10715818 DOI: 10.1063/5.0172538] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/16/2023] [Accepted: 11/22/2023] [Indexed: 02/01/2024]
Abstract
The communication between different cell populations is an important aspect of many natural phenomena that can be studied with microfluidics. Using microfluidic valves, these complex interactions can be studied with a higher level of control by placing a valve between physically separated populations. However, most current valve designs do not display the properties necessary for this type of system, such as providing variable flow rate when embedded inside a microfluidic device. While some valves have been shown to have such tunable behavior, they have not been used for dynamic, real-time outputs. We present an electric solenoid valve that can be fabricated completely outside of a cleanroom and placed into any microfluidic device to offer control of dynamic fluid flow rates and profiles. After characterizing the behavior of this valve under controlled test conditions, we developed a regression model to determine the required input electrical signal to provide the solenoid the ability to create a desired flow profile. With this model, we demonstrated that the valve could be controlled to replicate a desired, time-varying pattern for the interface position of a co-laminar fluid stream. Our approach can be performed by other investigators with their microfluidic devices to produce predictable, dynamic fluidic behavior. In addition to modulating fluid flows, this work will be impactful for controlling cellular communication between distinct populations or even chemical reactions occurring in microfluidic channels.
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Affiliation(s)
- Mark A. DeAngelis
- Department of Mechanical Engineering, Carnegie Mellon University, Pittsburgh, Pennsylvania 15213, USA
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6
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Cardoso BD, Castanheira EMS, Lanceros‐Méndez S, Cardoso VF. Recent Advances on Cell Culture Platforms for In Vitro Drug Screening and Cell Therapies: From Conventional to Microfluidic Strategies. Adv Healthc Mater 2023; 12:e2202936. [PMID: 36898671 PMCID: PMC11468737 DOI: 10.1002/adhm.202202936] [Citation(s) in RCA: 33] [Impact Index Per Article: 16.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/14/2022] [Revised: 02/27/2023] [Indexed: 03/12/2023]
Abstract
The clinical translations of drugs and nanomedicines depend on coherent pharmaceutical research based on biologically accurate screening approaches. Since establishing the 2D in vitro cell culture method, the scientific community has improved cell-based drug screening assays and models. Those advances result in more informative biochemical assays and the development of 3D multicellular models to describe the biological complexity better and enhance the simulation of the in vivo microenvironment. Despite the overall dominance of conventional 2D and 3D cell macroscopic culture methods, they present physicochemical and operational challenges that impair the scale-up of drug screening by not allowing a high parallelization, multidrug combination, and high-throughput screening. Their combination and complementarity with microfluidic platforms enable the development of microfluidics-based cell culture platforms with unequivocal advantages in drug screening and cell therapies. Thus, this review presents an updated and consolidated view of cell culture miniaturization's physical, chemical, and operational considerations in the pharmaceutical research scenario. It clarifies advances in the field using gradient-based microfluidics, droplet-based microfluidics, printed-based microfluidics, digital-based microfluidics, SlipChip, and paper-based microfluidics. Finally, it presents a comparative analysis of the performance of cell-based methods in life research and development to achieve increased precision in the drug screening process.
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Affiliation(s)
- Beatriz D. Cardoso
- Physics Centre of Minho and Porto Universities (CF‐UM‐UP), Campus de GualtarUniversity of MinhoBraga4710‐057Portugal
- LaPMET‐Laboratory of Physics for Materials and Emergent TechnologiesUniversity of Minho4710‐057BragaPortugal
- Center for MicroElectromechanical Systems (CMEMS‐UMinho)Campus de AzurémUniversity of Minho4800‐058GuimarãesPortugal
- LABBELS‐Associate Laboratory in Biotechnology and Bioengineering and Microelectromechanical SystemsUniversity of MinhoBraga/GuimarãesPortugal
| | - Elisabete M. S. Castanheira
- Physics Centre of Minho and Porto Universities (CF‐UM‐UP), Campus de GualtarUniversity of MinhoBraga4710‐057Portugal
- LaPMET‐Laboratory of Physics for Materials and Emergent TechnologiesUniversity of Minho4710‐057BragaPortugal
| | - Senentxu Lanceros‐Méndez
- Physics Centre of Minho and Porto Universities (CF‐UM‐UP), Campus de GualtarUniversity of MinhoBraga4710‐057Portugal
- LaPMET‐Laboratory of Physics for Materials and Emergent TechnologiesUniversity of Minho4710‐057BragaPortugal
- BCMaterialsBasque Center for MaterialsApplications and NanostructuresUPV/EHU Science ParkLeioa48940Spain
- IKERBASQUEBasque Foundation for ScienceBilbao48009Spain
| | - Vanessa F. Cardoso
- Center for MicroElectromechanical Systems (CMEMS‐UMinho)Campus de AzurémUniversity of Minho4800‐058GuimarãesPortugal
- LABBELS‐Associate Laboratory in Biotechnology and Bioengineering and Microelectromechanical SystemsUniversity of MinhoBraga/GuimarãesPortugal
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7
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Point-of-care diagnostics for sepsis using clinical biomarkers and microfluidic technology. Biosens Bioelectron 2023; 227:115181. [PMID: 36867959 DOI: 10.1016/j.bios.2023.115181] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/18/2022] [Revised: 02/13/2023] [Accepted: 02/23/2023] [Indexed: 03/05/2023]
Abstract
Sepsis is a life-threatening immune response which is caused by a wide variety of sources and is a leading cause of mortality globally. Rapid diagnosis and appropriate antibiotic treatment are critical for successful patient outcomes; however, current molecular diagnostic techniques are time-consuming, costly and require trained personnel. Additionally, there is a lack of rapid point-of-care (POC) devices available for sepsis detection despite the urgent requirements in emergency departments and low-resource areas. Recent advances have been made toward developing a POC test for early sepsis detection that will be more rapid and accurate compared to conventional techniques. Within this context, this review discusses the use of current and novel biomarkers for early sepsis diagnosis using microfluidics devices for POC testing.
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8
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A Cataño J, Farthing S, Mascarenhas Z, Lake N, Yarlagadda PKDV, Li Z, Toh YC. A User-Centric 3D-Printed Modular Peristaltic Pump for Microfluidic Perfusion Applications. MICROMACHINES 2023; 14:mi14050930. [PMID: 37241553 DOI: 10.3390/mi14050930] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/16/2023] [Revised: 04/17/2023] [Accepted: 04/23/2023] [Indexed: 05/28/2023]
Abstract
Microfluidic organ-on-a-chip (OoC) technology has enabled studies on dynamic physiological conditions as well as being deployed in drug testing applications. A microfluidic pump is an essential component to perform perfusion cell culture in OoC devices. However, it is challenging to have a single pump that can fulfil both the customization function needed to mimic a myriad of physiological flow rates and profiles found in vivo and multiplexing requirements (i.e., low cost, small footprint) for drug testing operations. The advent of 3D printing technology and open-source programmable electronic controllers presents an opportunity to democratize the fabrication of mini-peristaltic pumps suitable for microfluidic applications at a fraction of the cost of commercial microfluidic pumps. However, existing 3D-printed peristaltic pumps have mainly focused on demonstrating the feasibility of using 3D printing to fabricate the structural components of the pump and neglected user experience and customization capability. Here, we present a user-centric programmable 3D-printed mini-peristaltic pump with a compact design and low manufacturing cost (~USD 175) suitable for perfusion OoC culture applications. The pump consists of a user-friendly, wired electronic module that controls the operation of a peristaltic pump module. The peristaltic pump module comprises an air-sealed stepper motor connected to a 3D-printed peristaltic assembly, which can withstand the high-humidity environment of a cell culture incubator. We demonstrated that this pump allows users to either program the electronic module or use different-sized tubing to deliver a wide range of flow rates and flow profiles. The pump also has multiplexing capability as it can accommodate multiple tubing. The performance and user-friendliness of this low-cost, compact pump can be easily deployed for various OoC applications.
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Affiliation(s)
- Jorge A Cataño
- School of Mechanical, Medical and Process Engineering, Queensland University of Technology, Brisbane 4000, Australia
- Centre for Biomedical Technologies, Queensland University of Technology, Kelvin Grove 4059, Australia
| | - Steven Farthing
- School of Mechanical, Medical and Process Engineering, Queensland University of Technology, Brisbane 4000, Australia
| | - Zeus Mascarenhas
- School of Mechanical, Medical and Process Engineering, Queensland University of Technology, Brisbane 4000, Australia
| | - Nathaniel Lake
- School of Mechanical, Medical and Process Engineering, Queensland University of Technology, Brisbane 4000, Australia
| | - Prasad K D V Yarlagadda
- School of Mechanical, Medical and Process Engineering, Queensland University of Technology, Brisbane 4000, Australia
- Centre for Biomedical Technologies, Queensland University of Technology, Kelvin Grove 4059, Australia
- School of Engineering, University of Southern Queensland, Springfield Central 4300, Australia
| | - Zhiyong Li
- School of Mechanical, Medical and Process Engineering, Queensland University of Technology, Brisbane 4000, Australia
- Centre for Biomedical Technologies, Queensland University of Technology, Kelvin Grove 4059, Australia
| | - Yi-Chin Toh
- School of Mechanical, Medical and Process Engineering, Queensland University of Technology, Brisbane 4000, Australia
- Centre for Biomedical Technologies, Queensland University of Technology, Kelvin Grove 4059, Australia
- Max Planck Queensland Centre (MPQC) for the Materials Science of Extracellular Matrices, Queensland University of Technology, Kelvin Grove 4059, Australia
- Centre for Microbiome Research, Queensland University of Technology, Woolloongabba 4102, Australia
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9
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Su R, Wang F, McAlpine MC. 3D printed microfluidics: advances in strategies, integration, and applications. LAB ON A CHIP 2023; 23:1279-1299. [PMID: 36779387 DOI: 10.1039/d2lc01177h] [Citation(s) in RCA: 36] [Impact Index Per Article: 18.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/18/2023]
Abstract
The ability to construct multiplexed micro-systems for fluid regulation could substantially impact multiple fields, including chemistry, biology, biomedicine, tissue engineering, and soft robotics, among others. 3D printing is gaining traction as a compelling approach to fabricating microfluidic devices by providing unique capabilities, such as 1) rapid design iteration and prototyping, 2) the potential for automated manufacturing and alignment, 3) the incorporation of numerous classes of materials within a single platform, and 4) the integration of 3D microstructures with prefabricated devices, sensing arrays, and nonplanar substrates. However, to widely deploy 3D printed microfluidics at research and commercial scales, critical issues related to printing factors, device integration strategies, and incorporation of multiple functionalities require further development and optimization. In this review, we summarize important figures of merit of 3D printed microfluidics and inspect recent progress in the field, including ink properties, structural resolutions, and hierarchical levels of integration with functional platforms. Particularly, we highlight advances in microfluidic devices printed with thermosetting elastomers, printing methodologies with enhanced degrees of automation and resolution, and the direct printing of microfluidics on various 3D surfaces. The substantial progress in the performance and multifunctionality of 3D printed microfluidics suggests a rapidly approaching era in which these versatile devices could be untethered from microfabrication facilities and created on demand by users in arbitrary settings with minimal prior training.
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Affiliation(s)
- Ruitao Su
- School of Mechanical and Power Engineering, Zhengzhou University, 100 Science Avenue, Zhengzhou, Henan 450001, China
| | - Fujun Wang
- Department of Mechanical Engineering, University of Minnesota, 111 Church Street SE, Minneapolis, MN 55455, USA.
| | - Michael C McAlpine
- Department of Mechanical Engineering, University of Minnesota, 111 Church Street SE, Minneapolis, MN 55455, USA.
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10
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Closed-loop Control Systems for Pumps used in Portable Analytical Systems. J Chromatogr A 2023; 1695:463931. [PMID: 37011525 DOI: 10.1016/j.chroma.2023.463931] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2022] [Revised: 02/27/2023] [Accepted: 03/14/2023] [Indexed: 03/17/2023]
Abstract
The demand for accurate control of the flowrate/pressure in chemical analytical systems has given rise to the adoption of mechatronic approaches in analytical instruments. A mechatronic device is a synergistic system which combines mechanical, electronic, computer and control components. In the development of portable analytical devices, considering the instrument as a mechatronic system can be useful to mitigate compromises made to decrease space, weight, or power consumption. Fluid handling is important for reliability, however, commonly utilized platforms such as syringe and peristaltic pumps are typically characterized by flow/pressure fluctuations and slow responses. Closed loop control systems have been used effectively to decrease the difference between desired and realized fluidic output. This review discusses the way control systems have been implemented for enhanced fluidic control, categorized by pump type. Advanced control strategies used to enhance the transient and the steady state responses are discussed, along with examples of their implementation in portable analytical systems. The review is concluded with the outlook that the challenge in adequately expressing the complexity and dynamics of the fluidic network as a mathematical model has yielded a trend towards the adoption of experimentally informed models and machine learning approaches.
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11
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Zuchowicz N, Liu Y, Monroe WT, Tiersch TR. An automated modular open-technology device to measure and adjust concentration of aquatic sperm samples for cryopreservation. SLAS Technol 2023; 28:43-52. [PMID: 36455857 PMCID: PMC9969519 DOI: 10.1016/j.slast.2022.11.002] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/27/2022] [Revised: 09/29/2022] [Accepted: 11/24/2022] [Indexed: 11/30/2022]
Abstract
Repositories for aquatic germplasm are essential for safeguarding valuable genetic diversity for species relevant to aquaculture, biomedical research, and conservation. Development of aquatic germplasm repositories is impeded by a lack of standardization within laboratories and across the research community. Protocols for cryopreservation are often developed ad hoc and without close attention to variables, such as cell concentration, that strongly affect the success and reproducibility of cryopreservation. The wide dissemination and use of specialized tools and devices as open hardware can improve processing reliability and save costs. The goal of the present work was to develop and prototype a modular and open-technology approach to help to standardize the cell concentration of germplasm samples prior to cryopreservation. The specific objectives were to: 1) design and fabricate prototypes of the automated concentration measurement and adjustment system (CMAS), incorporating custom peristaltic pumps and optical evaluation modules, and 2) evaluate the performance of the CMAS with biological samples. Linear regression models were obtained for estimation of aquatic sperm concentration >108 cells/mL and for algae concentration > (3 × 105) cells/mL. Algae were diluted with extender medium by an automated process, resulting in a dilution precision of ±12.6% and ±6.7% in two trials, attaining means of 89% and 71% of the target cell concentration. The development of the CMAS as open technology can provide opportunities for community-level standardization in cryopreservation of aquatic germplasm and can invite new users, makers, and developers into the open-technology community. This will increase the reach and capabilities of much-needed aquatic germplasm repositories.
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Affiliation(s)
- Nikolas Zuchowicz
- Aquatic Germplasm and Genetic Resources Center, School of Renewable Natural Resources, Louisiana State University Agricultural Center, Baton Rouge, LA, USA
| | - Yue Liu
- Aquatic Germplasm and Genetic Resources Center, School of Renewable Natural Resources, Louisiana State University Agricultural Center, Baton Rouge, LA, USA; Department of Biological and Agricultural Engineering, Louisiana State University & Louisiana State University Agricultural Center, Baton Rouge, LA, USA
| | - W Todd Monroe
- Department of Biological and Agricultural Engineering, Louisiana State University & Louisiana State University Agricultural Center, Baton Rouge, LA, USA
| | - Terrence R Tiersch
- Aquatic Germplasm and Genetic Resources Center, School of Renewable Natural Resources, Louisiana State University Agricultural Center, Baton Rouge, LA, USA.
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12
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Dhwaj A, Roy N, Jaiswar A, Prabhakar A, Verma D. 3D-Printed Impedance Micropump for Continuous Perfusion of the Sample and Nutrient Medium Integrated with a Liver-On-Chip Prototype. ACS OMEGA 2022; 7:40900-40910. [PMID: 36406565 PMCID: PMC9670287 DOI: 10.1021/acsomega.2c03818] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/22/2022] [Accepted: 10/26/2022] [Indexed: 05/31/2023]
Abstract
In recent decades, organ-on-chip devices have gained substantial interest as an alternative for studying the pathophysiological processes relevant to drug screening. Micropumps are being utilized to simulate the in vivo physiological fluid flow more realistically in these organ-on-chip devices. Micropumps play a crucial role in pumping, perfusion, and circulation of fluids in various microdevices such as on-chip PCR, DNA microarrays, miniature bioreactor cell separation, and lab-on-chip biosensing platforms. With the rapid growth in technology, efficient pumping for proper circulation of media and nutrients has become imperative. In this study, we have described the design and development of an open-source impedance micropump for continuous perfusion of nutrient medium in a liver-on-chip prototype. This micropump is controlled via an integrated microcontroller board, with an observed flow rate ranging from 0.2 to 2 mL/min. Google Sketchup 2020 and DLP 3D printing were used to fabricate small precise parts of the impedance micropump. The flow rate was measured to characterize the actuating performance of the micropump. The poly-dimethyl siloxane-based liver-on-chip prototype has been fabricated using a soft photolithography procedure. Further, a study of continuous perfusion of culture medium through the liver-on-chip containing the Hepg2 cell line was successfully performed by integrating it with the impedance micropump. Hoechst staining and Alamar Blue observed cell viability to confirm the healthy cell growth inside the liver-on-chip microfluidic chip. The compactness of the overall setup allows it to fit in a Petri plate, eliminating chances of contamination while cell handling.
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Affiliation(s)
- Amar Dhwaj
- Department
of Applied Sciences, Indian Institute of
Information Technology, Prayagraj, Uttar Pradesh211015, India
| | - Nimisha Roy
- Department
of Applied Sciences, Indian Institute of
Information Technology, Prayagraj, Uttar Pradesh211015, India
| | - Ankur Jaiswar
- Department
of Applied Sciences, Indian Institute of
Information Technology, Prayagraj, Uttar Pradesh211015, India
| | - Amit Prabhakar
- Department
of Applied Sciences, Indian Institute of
Information Technology, Prayagraj, Uttar Pradesh211015, India
| | - Deepti Verma
- Department
of Chemistry, Allahabad University, Prayagraj, Uttar Pradesh211002, India
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13
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Keesey R, LeSuer R, Schrier J. Sidekick: A Low-Cost Open-Source 3D-printed liquid dispensing robot. HARDWAREX 2022; 12:e00319. [PMID: 35677813 PMCID: PMC9168727 DOI: 10.1016/j.ohx.2022.e00319] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/02/2022] [Revised: 04/23/2022] [Accepted: 05/22/2022] [Indexed: 06/15/2023]
Abstract
The Sidekick is a desktop liquid dispenser, compatible with standard SBS microplates and designed for accessible laboratory automation. It features an armature-based motion system and a fully 3D-printed chassis to reduce overall mechanical complexity and accommodate user modification. Liquid dispensing is achieved with four commercially available solenoid driven positive displacement pumps that deliver liquid in 10 µL increments. A Raspberry Pi Pico RP2040 processor programmed in MicroPython is used for control, and exposes a USB serial interface for users to submit commands using either a simple vocabulary of commands or a subset of G-Code. At a total cost of $710 USD, the Sidekick offers laboratories an easy to build, easily maintained, open-source liquid dispensing system for both research and pedagogical introductions to lab automation.
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Affiliation(s)
- Rodolfo Keesey
- Department of Chemistry, Fordham University, 441 E. Fordham Road, The Bronx, NY 10458, USA
| | - Robert LeSuer
- Department of Chemistry and Biochemistry, SUNY Brockport, 350 New Campus Drive, Brockport, NY 14420, USA
| | - Joshua Schrier
- Department of Chemistry, Fordham University, 441 E. Fordham Road, The Bronx, NY 10458, USA
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14
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de Graaf MNS, Vivas A, van der Meer AD, Mummery CL, Orlova VV. Pressure-Driven Perfusion System to Control, Multiplex and Recirculate Cell Culture Medium for Organs-on-Chips. MICROMACHINES 2022; 13:mi13081359. [PMID: 36014281 PMCID: PMC9416133 DOI: 10.3390/mi13081359] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/30/2022] [Revised: 08/15/2022] [Accepted: 08/19/2022] [Indexed: 05/14/2023]
Abstract
Organ-on-chip (OoC) devices are increasingly used to mimic the tissue microenvironment of cells in intact organs. This includes microchannels to mimic, for example, fluidic flow through blood vessels. Present methods for controlling microfluidic flow in these systems rely on gravity, rocker systems or external pressure pumps. For many purposes, pressure pumps give the most consistent flow profiles, but they are not well-suited for high throughput as might be required for testing drug responses. Here, we describe a method which allows for multiplexing of microfluidic channels in OoC devices plus the accompanying custom software necessary to run the system. Moreover, we show the approach is also suitable for recirculation of culture medium, an essential cost consideration when expensive culture reagents are used and are not "spent" through uptake by the cells during transient unidirectional flow.
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Affiliation(s)
- Mees N. S. de Graaf
- Department of Anatomy and Embryology, Leiden University Medical Center, Einthovenweg 20, 2333 ZC Leiden, The Netherlands
| | - Aisen Vivas
- Applied Stem Cell Technologies, Technical Medical Centre, University of Twente, 7500 AE Enschede, The Netherlands
- BIOS Lab on a Chip Group, MESA+ Center for Nanotechnology, Technical Medical Centre, Max Planck Institute for Complex Fluid Dynamics, University of Twente, 7500 AE Enschede, The Netherlands
| | - Andries D. van der Meer
- Applied Stem Cell Technologies, Technical Medical Centre, University of Twente, 7500 AE Enschede, The Netherlands
| | - Christine L. Mummery
- Department of Anatomy and Embryology, Leiden University Medical Center, Einthovenweg 20, 2333 ZC Leiden, The Netherlands
- Applied Stem Cell Technologies, Technical Medical Centre, University of Twente, 7500 AE Enschede, The Netherlands
| | - Valeria V. Orlova
- Department of Anatomy and Embryology, Leiden University Medical Center, Einthovenweg 20, 2333 ZC Leiden, The Netherlands
- Correspondence:
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15
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Rogkas N, Vakouftsis C, Spitas V, Lagaros ND, Georgantzinos SK. Design Aspects of Additive Manufacturing at Microscale: A Review. MICROMACHINES 2022; 13:mi13050775. [PMID: 35630242 PMCID: PMC9147298 DOI: 10.3390/mi13050775] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/25/2022] [Revised: 04/27/2022] [Accepted: 05/12/2022] [Indexed: 02/06/2023]
Abstract
Additive manufacturing (AM) technology has been researched and developed for almost three decades. Microscale AM is one of the fastest-growing fields of research within the AM area. Considerable progress has been made in the development and commercialization of new and innovative microscale AM processes, as well as several practical applications in a variety of fields. However, there are still significant challenges that exist in terms of design, available materials, processes, and the ability to fabricate true three-dimensional structures and systems at a microscale. For instance, microscale AM fabrication technologies are associated with certain limitations and constraints due to the scale aspect, which may require the establishment and use of specialized design methodologies in order to overcome them. The aim of this paper is to review the main processes, materials, and applications of the current microscale AM technology, to present future research needs for this technology, and to discuss the need for the introduction of a design methodology. Thus, one of the primary concerns of the current paper is to present the design aspects describing the comparative advantages and AM limitations at the microscale, as well as the selection of processes and materials.
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Affiliation(s)
- Nikolaos Rogkas
- Laboratory of Machine Design, National Technical University of Athens, 9 Iroon Polytechniou, 15780 Zografou, Greece; (N.R.); (C.V.); (V.S.)
| | - Christos Vakouftsis
- Laboratory of Machine Design, National Technical University of Athens, 9 Iroon Polytechniou, 15780 Zografou, Greece; (N.R.); (C.V.); (V.S.)
| | - Vasilios Spitas
- Laboratory of Machine Design, National Technical University of Athens, 9 Iroon Polytechniou, 15780 Zografou, Greece; (N.R.); (C.V.); (V.S.)
| | - Nikos D. Lagaros
- Institute of Structural Analysis and Antiseismic Research, School of Civil Engineering, National Technical University of Athens, 9 Iroon Polytechniou, 15780 Zographou, Greece;
| | - Stelios K. Georgantzinos
- Laboratory for Advanced Materials, Structures and Digitalization, Department of Aerospace Science and Technology, National and Kapodistrian University of Athens, Evripus Campus, 34400 Psachna, Greece
- Correspondence:
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16
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Lin C, Wang Y, Huang Z, Guo Y, Wu W. Low Cost Three-Dimensional Programmed Mini-Pump Used in PCR. MICROMACHINES 2022; 13:mi13050772. [PMID: 35630239 PMCID: PMC9143699 DOI: 10.3390/mi13050772] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/27/2022] [Revised: 05/06/2022] [Accepted: 05/11/2022] [Indexed: 02/05/2023]
Abstract
Programmed mini-pumps play a significant role in various fields, such as chemistry, biology, and medicine, to transport a measured volume of liquid, especially in the current detection of (COVID-19) with PCR. In view of the cost of the current automatic pipetting pump being higher, which is difficult to use in a regular lab, this paper designed and assembled a three-dimensional programmed mini-pump with the common parts and components, such as PLC controller, motor, microinjector, etc. With the weighting calibration before and after pipetting operation, the error of the pipette in 10 μL (0.2%), 2 μL (1.8%), and 1 μL (5.6%) can be obtained. Besides, the contrast test between three-dimensional programmed mini-pump and manual pipette was conducted with the ORF1ab and pGEM-3Zf (+) genes in qPCR. The results proved that the custom-made three-dimensional programmed mini-pump has a stronger reproducibility compared with manual pipette (ORF1ab: 24.06 ± 0.33 vs. 23.50 ± 0.58, p = 0.1014; pGEM-3Zf (+): 11.83.06 ± 0.24 vs. 11.50 ± 0.34, p = 0.8779). These results can lay the foundation for the functional, fast, and low-cost programmed mini-pump in PCR or other applications for trace measurements.
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Affiliation(s)
- Chengxiong Lin
- National Engineering Research Center for Healthcare Devices, Guangdong Provincial Key Laboratory of Medical Electronic Instruments and Polymer Material Products, Institute of Biological and Medical Engineering, Guangdong Academy of Sciences, Guangzhou 510316, China; (C.L.); (Y.W.); (Z.H.); (Y.G.)
- School of Mechanical and Electrical Engineering, Guangdong University of Technology, Guangzhou 510006, China
| | - Yaocheng Wang
- National Engineering Research Center for Healthcare Devices, Guangdong Provincial Key Laboratory of Medical Electronic Instruments and Polymer Material Products, Institute of Biological and Medical Engineering, Guangdong Academy of Sciences, Guangzhou 510316, China; (C.L.); (Y.W.); (Z.H.); (Y.G.)
| | - Zhengyu Huang
- National Engineering Research Center for Healthcare Devices, Guangdong Provincial Key Laboratory of Medical Electronic Instruments and Polymer Material Products, Institute of Biological and Medical Engineering, Guangdong Academy of Sciences, Guangzhou 510316, China; (C.L.); (Y.W.); (Z.H.); (Y.G.)
| | - Yu Guo
- National Engineering Research Center for Healthcare Devices, Guangdong Provincial Key Laboratory of Medical Electronic Instruments and Polymer Material Products, Institute of Biological and Medical Engineering, Guangdong Academy of Sciences, Guangzhou 510316, China; (C.L.); (Y.W.); (Z.H.); (Y.G.)
- School of Mechanical and Electrical Engineering, Guangdong University of Technology, Guangzhou 510006, China
| | - Wenming Wu
- National Engineering Research Center for Healthcare Devices, Guangdong Provincial Key Laboratory of Medical Electronic Instruments and Polymer Material Products, Institute of Biological and Medical Engineering, Guangdong Academy of Sciences, Guangzhou 510316, China; (C.L.); (Y.W.); (Z.H.); (Y.G.)
- Correspondence:
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17
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LaChance J, Schottdorf M, Zajdel TJ, Saunders JL, Dvali S, Marshall C, Seirup L, Sammour I, Chatburn RL, Notterman DA, Cohen DJ. PVP1-The People's Ventilator Project: A fully open, low-cost, pressure-controlled ventilator research platform compatible with adult and pediatric uses. PLoS One 2022; 17:e0266810. [PMID: 35544461 PMCID: PMC9094548 DOI: 10.1371/journal.pone.0266810] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/03/2021] [Accepted: 03/28/2022] [Indexed: 12/03/2022] Open
Abstract
Mechanical ventilators are safety-critical devices that help patients breathe, commonly found in hospital intensive care units (ICUs)-yet, the high costs and proprietary nature of commercial ventilators inhibit their use as an educational and research platform. We present a fully open ventilator device-The People's Ventilator: PVP1-with complete hardware and software documentation including detailed build instructions and a DIY cost of $1,700 USD. We validate PVP1 against both key performance criteria specified in the U.S. Food and Drug Administration's Emergency Use Authorization for Ventilators, and in a pediatric context against a state-of-the-art commercial ventilator. Notably, PVP1 performs well over a wide range of test conditions and performance stability is demonstrated for a minimum of 75,000 breath cycles over three days with an adult mechanical test lung. As an open project, PVP1 can enable future educational, academic, and clinical developments in the ventilator space.
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Affiliation(s)
- Julienne LaChance
- Department of Mechanical and Aerospace Engineering, Princeton University, Princeton, New Jersey, United States of America
| | - Manuel Schottdorf
- Princeton Neuroscience Institute, Princeton University, Princeton, New Jersey, United States of America
| | - Tom J. Zajdel
- Department of Electrical and Computer Engineering, Carnegie Mellon University, Pittsburgh, Pennsylvania, United States of America
| | - Jonny L. Saunders
- Department of Psychology and Institute of Neuroscience, University of Oregon, Eugene, Oregon, United States of America
| | - Sophie Dvali
- Department of Physics, Princeton University, Princeton, New Jersey, United States of America
| | - Chase Marshall
- RailPod, Inc., Boston, Massachusetts, United States of America
| | - Lorenzo Seirup
- New York ISO, Rensselaer, New York, United States of America
| | - Ibrahim Sammour
- Department of Neonatology, Cleveland Clinic Lerner College of Medicine, Cleveland, Ohio, United States of America
| | - Robert L. Chatburn
- Department of Neonatology, Cleveland Clinic Lerner College of Medicine, Cleveland, Ohio, United States of America
| | - Daniel A. Notterman
- Department of Molecular Biology, Princeton University, Princeton, New Jersey, United States of America
| | - Daniel J. Cohen
- Department of Mechanical and Aerospace Engineering, Princeton University, Princeton, New Jersey, United States of America
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18
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Yang J, Cheng Y, Gong X, Yi S, Li CW, Jiang L, Yi C. An integrative review on the applications of 3D printing in the field of in vitro diagnostics. CHINESE CHEM LETT 2022. [DOI: 10.1016/j.cclet.2021.08.105] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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19
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Harmon ER, Liu Y, Shamkhalichenar H, Browning V, Savage M, Tiersch TR, Monroe WT. An Open-Hardware Insemination Device for Small-Bodied Live-Bearing Fishes to Support Development and Use of Germplasm Repositories. Animals (Basel) 2022; 12:961. [PMID: 35454209 PMCID: PMC9032428 DOI: 10.3390/ani12080961] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/01/2022] [Revised: 03/29/2022] [Accepted: 03/30/2022] [Indexed: 02/06/2023] Open
Abstract
Small-bodied live-bearing fishes attract broad attention because of their importance in biomedical research and critical conservation status in natural habitats. Artificial insemination is an essential process to establish hybrid lines and for the operation of sperm repositories. The existing mouth-pipetting technique for artificial insemination of live-bearing fishes has not been substantially upgraded since the first implementation in the 1950s. The goal of this work was to develop a standardized artificial inseminator device (SAID) to address issues routinely encountered in insemination by mouth-pipetting, including lack of reproducibility among different users, difficulty in training, and large unreportable variation in sample volume and pressure during insemination. Prototypes of the SAID were designed as relatively inexpensive ( 0.99) between the piston position and volume. Pressure generation from eight mouth-pipetting operators and SAID prototypes were assessed by pressure sensors. The pressure control by SAID was superior to that produced by mouth-pipetting, yielding lower pressures (31−483 Pa) and smaller variations (standard deviation <11 Pa). These pressures were sufficient to deliver 1−5 μL of fluid into female reproductive tracts yet low enough to avoid physical injury to fish. Community-level enhancements of the SAID prototype could enable standardized insemination with minimal training and facilitate the participation of research communities in the use of cryopreserved genetic resources.
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Affiliation(s)
- Elise R. Harmon
- Department of Biological and Agricultural Engineering, Louisiana State University, Baton Rouge, LA 70803, USA; (E.R.H.); (Y.L.); (V.B.)
- Aquatic Germplasm and Genetic Resources Center, School of Renewable Natural Resources, Louisiana State University Agricultural Center, Baton Rouge, LA 70820, USA; (H.S.); (T.R.T.)
| | - Yue Liu
- Department of Biological and Agricultural Engineering, Louisiana State University, Baton Rouge, LA 70803, USA; (E.R.H.); (Y.L.); (V.B.)
- Aquatic Germplasm and Genetic Resources Center, School of Renewable Natural Resources, Louisiana State University Agricultural Center, Baton Rouge, LA 70820, USA; (H.S.); (T.R.T.)
| | - Hamed Shamkhalichenar
- Aquatic Germplasm and Genetic Resources Center, School of Renewable Natural Resources, Louisiana State University Agricultural Center, Baton Rouge, LA 70820, USA; (H.S.); (T.R.T.)
- School of Electrical Engineering and Computer Science, Louisiana State University, Baton Rouge, LA 70803, USA
| | - Valentino Browning
- Department of Biological and Agricultural Engineering, Louisiana State University, Baton Rouge, LA 70803, USA; (E.R.H.); (Y.L.); (V.B.)
| | - Markita Savage
- The Xiphophorus Genetic Stock Center, Texas State University, San Marcos, TX 78666, USA;
| | - Terrence R. Tiersch
- Aquatic Germplasm and Genetic Resources Center, School of Renewable Natural Resources, Louisiana State University Agricultural Center, Baton Rouge, LA 70820, USA; (H.S.); (T.R.T.)
| | - William Todd Monroe
- Department of Biological and Agricultural Engineering, Louisiana State University, Baton Rouge, LA 70803, USA; (E.R.H.); (Y.L.); (V.B.)
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20
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Del Rosario M, Heil HS, Mendes A, Saggiomo V, Henriques R. The Field Guide to 3D Printing in Optical Microscopy for Life Sciences. Adv Biol (Weinh) 2022; 6:e2100994. [PMID: 34693666 DOI: 10.1002/adbi.202100994] [Citation(s) in RCA: 27] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/21/2021] [Revised: 08/20/2021] [Indexed: 01/27/2023]
Abstract
The maker movement has reached the optics labs, empowering researchers to create and modify microscope designs and imaging accessories. 3D printing has a disruptive impact on the field, improving accessibility to fabrication technologies in additive manufacturing. This approach is particularly useful for rapid, low-cost prototyping, allowing unprecedented levels of productivity and accessibility. From inexpensive microscopes for education such as the FlyPi to the highly complex robotic microscope OpenFlexure, 3D printing is paving the way for the democratization of technology, promoting collaborative environments between researchers, as 3D designs are easily shared. This holds the unique possibility of extending the open-access concept from knowledge to technology, allowing researchers everywhere to use and extend model structures. Here, it is presented a review of additive manufacturing applications in optical microscopy for life sciences, guiding the user through this new and exciting technology and providing a starting point to anyone willing to employ this versatile and powerful new tool.
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Affiliation(s)
- Mario Del Rosario
- Optical Cell Biology, Instituto Gulbenkian de Ciência, Oeiras, 2780-156, Portugal
| | - Hannah S Heil
- Optical Cell Biology, Instituto Gulbenkian de Ciência, Oeiras, 2780-156, Portugal
| | - Afonso Mendes
- Optical Cell Biology, Instituto Gulbenkian de Ciência, Oeiras, 2780-156, Portugal
| | - Vittorio Saggiomo
- Laboratory of BioNanoTechnology, Wageningen University and Research, Wageningen, 6708WG, The Netherlands
| | - Ricardo Henriques
- Optical Cell Biology, Instituto Gulbenkian de Ciência, Oeiras, 2780-156, Portugal
- Quantitative Imaging and Nanobiophysics, MRC Laboratory for Molecular Cell Biology, University College London, London, UK
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21
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Concilia G, Lai A, Thurgood P, Pirogova E, Baratchi S, Khoshmanesh K. Investigating the mechanotransduction of transient shear stress mediated by Piezo1 ion channel using a 3D printed dynamic gravity pump. LAB ON A CHIP 2022; 22:262-271. [PMID: 34931212 DOI: 10.1039/d1lc00927c] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
Abstract
Microfluidic systems are widely used for studying the mechanotransduction of flow-induced shear stress in mechanosensitive cells. However, these studies are generally performed under constant flow rates, mainly, due to the deficiency of existing pumps for generating transient flows. To address this limitation, we have developed a unique dynamic gravity pump to generate transient flows in microfluidics. The pump utilises a motorised 3D-printed cam-lever mechanism to change the inlet pressure of the system in repeated cycles. 3D printing technology facilitates the rapid and low-cost prototyping of the pump. Customised transient flow patterns can be generated by modulating the profile, size, and rotational speed of the cam, location of the hinge along the lever, and the height of the syringe. Using this unique dynamic gravity pump, we investigated the mechanotransduction of shear stress in HEK293 cells stably expressing Piezo1 mechanosensitive ion channel under transient flows. The controllable, simple, low-cost, compact, and modular design of the pump makes it suitable for studying the mechanobiology of shear sensitive cells under transient flows.
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Affiliation(s)
| | - Austin Lai
- School of Health & Biomedical Sciences, RMIT University, Bundoora, Victoria, Australia.
| | - Peter Thurgood
- School of Engineering, RMIT University, Melbourne, Victoria, Australia.
| | - Elena Pirogova
- School of Engineering, RMIT University, Melbourne, Victoria, Australia.
| | - Sara Baratchi
- School of Health & Biomedical Sciences, RMIT University, Bundoora, Victoria, Australia.
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22
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Abstract
Manipulation of fluid flow is paramount for microfluidic device operation. Conventional microfluidic pumps are often expensive, bulky, complicated, and not amenable in limited resource settings. Here, we introduce a Fully self-sufficient, RobUst, Gravity-Assisted, Low-cost (FRUGAL) microfluidic pump. The pump consists of a syringe, a syringe holder and loading masses. The system is easy to assemble, inexpensive, portable, and electrical power-free. Inside the syringe, the fluid is driven by the pressure from the weight of the loading masses. During operation, the exerted pressure is dynamically controllable and stable for hours. These features are useful for optimization of microfluidics assays and dynamic temporal studies. We demonstrate the application of this system to control the formation of water-in-oil droplet emulsion. Benefitting from its simplicity and versatility, the frugal microfluidic pump will enable global adoption of microfluidic technology in chemistry and biomedical applications, especially in limited resource environments.
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Affiliation(s)
- Apresio K Fajrial
- Paul M. Rady Department of Mechanical Engineering, University of Colorado Boulder, Boulder, CO, 80309, USA.
| | - Adam Vega
- Paul M. Rady Department of Mechanical Engineering, University of Colorado Boulder, Boulder, CO, 80309, USA.
| | - Gazendra Shakya
- Paul M. Rady Department of Mechanical Engineering, University of Colorado Boulder, Boulder, CO, 80309, USA.
| | - Xiaoyun Ding
- Paul M. Rady Department of Mechanical Engineering, University of Colorado Boulder, Boulder, CO, 80309, USA.
- Biomedical Engineering Program, University of Colorado Boulder, Boulder, CO, 80309, USA
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23
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Efromson JP, Li S, Lynch MD. BioSamplr: An open source, low cost automated sampling system for bioreactors. HARDWAREX 2021; 9:e00177. [PMID: 35492036 PMCID: PMC9041172 DOI: 10.1016/j.ohx.2021.e00177] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/25/2020] [Revised: 01/31/2021] [Accepted: 01/31/2021] [Indexed: 05/30/2023]
Abstract
Autosampling from bioreactors reduces error, increases reproducibility and offers improved aseptic handling when compared to manual sampling. Additionally, autosampling greatly decreases the hands-on time required for a bioreactor experiment and enables sampling 24 h a day. We have designed, built and tested a low cost, open source, automated bioreactor sampling system, the BioSamplr. The BioSamplr can take up to ten samples from a bioreactor at a desired sample interval and cools them to a desired temperature. The device, assembled from low cost and 3D printed components, is controlled wirelessly by a Raspberry Pi, and records all sampling data to a log file. The cost and accessibility of the BioSamplr make it useful for laboratories without access to more expensive and complex autosampling systems.
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Affiliation(s)
- John P. Efromson
- Department of Biomedical Engineering, Duke University, United States
| | - Shuai Li
- Department of Chemistry, Duke University, United States
| | - Michael D. Lynch
- Department of Biomedical Engineering, Duke University, United States
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24
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Gervasi A, Cardol P, Meyer PE. Open-hardware wireless controller and 3D-printed pumps for efficient liquid manipulation. HARDWAREX 2021; 9:e00199. [PMID: 35601242 PMCID: PMC9121357 DOI: 10.1016/j.ohx.2021.e00199] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/30/2020] [Revised: 04/12/2021] [Accepted: 05/03/2021] [Indexed: 05/09/2023]
Abstract
Many routines in biological experiments require the precise handling of liquid volumes in the range of microliters up to liters. In this paper, we describe a new wireless controller that is adapted to liquid manipulation tasks, in particular when combined with the proposed 3D-printed pumps. It can be built from widely available electronic components and managed with open-source software. The use of peristaltic pumps enables to move volumes from milliliters to liters with a relative error below 1% or a syringe pump capable of injecting volumes in the range of milliliters with microliter accuracy. The system is remotely controllable over WiFi and easily automated using the MQTT communication protocol. The programming of the microcontroller is performed on the Arduino IDE. The WiFi settings and the calibration value can be easily modified, stored and exported in the form of a JSON file to create a user friendly, plug and play and easily scalable device. Additional sensors or actuators can be added, allowing the system to adapt to various usages. Finally, in addition to its low manufacturing cost and its capability to fit a large variety of tasks involving liquid handling, our system has been specifically designed for research environments where adaptability and repeatability of experiments is essential.
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Affiliation(s)
- Alain Gervasi
- Genetics and Physiology of Microalgae, InBios/Phytosystems, BotaBotLab, Institut de Botanique, University of Liège, Belgium
| | - Pierre Cardol
- Genetics and Physiology of Microalgae, InBios/Phytosystems, Institut de botanique, University of Liège, Belgium
- Corresponding authors.
| | - Patrick E. Meyer
- Bioinformatics and Systems Biology Lab, InBios/Phytosystems, Institut de botanique, University of Liège, Belgium
- Corresponding authors.
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25
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Utility of low-cost, miniaturized peristaltic and Venturi pumps in droplet microfluidics. Anal Chim Acta 2021; 1151:338230. [PMID: 33608076 DOI: 10.1016/j.aca.2021.338230] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/14/2020] [Revised: 01/06/2021] [Accepted: 01/13/2021] [Indexed: 12/15/2022]
Abstract
Many laboratory applications utilizing droplet microfluidics rely on precision syringe pumps for flow generation. In this study, the use of an open-source peristaltic pump primarily composed of 3D printed parts and a low-cost commercial Venturi pump are explored for their use as an alternative to syringe pumps for droplet microfluidics. Both devices provided stable flow (<2% RSD) over a range of 1-7 μL/min and high reproducibility in signal intensity at a droplet generation rate around 0.25 Hz (<3% RSD), which are comparable in performance to similar measurements on standard syringe pumps. As a novel flow generation source for microfluidic applications, the use of the miniaturized Venturi pump was also applied to droplet signal monitoring studies used to measure changes in concentration over time, with average signal reproducibility <4% RSD for both single-stream fluorometric and reagent addition colorimetric applications. These low-cost flow methods provide stable flow sufficient for common droplet microfluidic approaches and can be implemented in a wide variety of simple, and potentially portable, analytical measurement devices.
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26
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Brooks SM, Alper HS. Applications, challenges, and needs for employing synthetic biology beyond the lab. Nat Commun 2021; 12:1390. [PMID: 33654085 PMCID: PMC7925609 DOI: 10.1038/s41467-021-21740-0] [Citation(s) in RCA: 98] [Impact Index Per Article: 24.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/14/2020] [Accepted: 02/10/2021] [Indexed: 02/07/2023] Open
Abstract
Synthetic biology holds great promise for addressing global needs. However, most current developments are not immediately translatable to 'outside-the-lab' scenarios that differ from controlled laboratory settings. Challenges include enabling long-term storage stability as well as operating in resource-limited and off-the-grid scenarios using autonomous function. Here we analyze recent advances in developing synthetic biological platforms for outside-the-lab scenarios with a focus on three major application spaces: bioproduction, biosensing, and closed-loop therapeutic and probiotic delivery. Across the Perspective, we highlight recent advances, areas for further development, possibilities for future applications, and the needs for innovation at the interface of other disciplines.
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Affiliation(s)
- Sierra M Brooks
- McKetta Department of Chemical Engineering, The University of Texas at Austin, Austin, TX, USA
| | - Hal S Alper
- McKetta Department of Chemical Engineering, The University of Texas at Austin, Austin, TX, USA.
- Institute for Cellular and Molecular Biology, The University of Texas at Austin, Austin, TX, USA.
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Duzagac F, Saorin G, Memeo L, Canzonieri V, Rizzolio F. Microfluidic Organoids-on-a-Chip: Quantum Leap in Cancer Research. Cancers (Basel) 2021; 13:737. [PMID: 33578886 PMCID: PMC7916612 DOI: 10.3390/cancers13040737] [Citation(s) in RCA: 54] [Impact Index Per Article: 13.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/07/2020] [Revised: 01/24/2021] [Accepted: 01/29/2021] [Indexed: 02/06/2023] Open
Abstract
Organ-like cell clusters, so-called organoids, which exhibit self-organized and similar organ functionality as the tissue of origin, have provided a whole new level of bioinspiration for ex vivo systems. Microfluidic organoid or organs-on-a-chip platforms are a new group of micro-engineered promising models that recapitulate 3D tissue structure and physiology and combines several advantages of current in vivo and in vitro models. Microfluidics technology is used in numerous applications since it allows us to control and manipulate fluid flows with a high degree of accuracy. This system is an emerging tool for understanding disease development and progression, especially for personalized therapeutic strategies for cancer treatment, which provide well-grounded, cost-effective, powerful, fast, and reproducible results. In this review, we highlight how the organoid-on-a-chip models have improved the potential of efficiency and reproducibility of organoid cultures. More widely, we discuss current challenges and development on organoid culture systems together with microfluidic approaches and their limitations. Finally, we describe the recent progress and potential utilization in the organs-on-a-chip practice.
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Affiliation(s)
- Fahriye Duzagac
- Department of Molecular Sciences and Nanosystems, Ca’ Foscari University of Venice, 30123 Venezia, Italy; (F.D.); (G.S.)
| | - Gloria Saorin
- Department of Molecular Sciences and Nanosystems, Ca’ Foscari University of Venice, 30123 Venezia, Italy; (F.D.); (G.S.)
| | - Lorenzo Memeo
- Department of Experimental Oncology, Mediterranean Institute of Oncology (IOM), 95029 Catania, Italy;
| | - Vincenzo Canzonieri
- Pathology Unit, Centro di Riferimento Oncologico di Aviano (CRO) IRCCS, 33081 Aviano, Italy;
- Department of Medical, Surgical and Health Sciences, University of Trieste, 34127 Trieste, Italy
| | - Flavio Rizzolio
- Department of Molecular Sciences and Nanosystems, Ca’ Foscari University of Venice, 30123 Venezia, Italy; (F.D.); (G.S.)
- Pathology Unit, Centro di Riferimento Oncologico di Aviano (CRO) IRCCS, 33081 Aviano, Italy;
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Grazioli C, Faura G, Dossi N, Toniolo R, Abate M, Terzi F, Bontempelli G. 3D printed portable instruments based on affordable electronics, smartphones and open-source microcontrollers suitable for monitoring food quality. Microchem J 2020. [DOI: 10.1016/j.microc.2020.105584] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
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Fuller HC, Wei TY, Behrens MR, Ruder WC. The Future Application of Organ-on-a-Chip Technologies as Proving Grounds for MicroBioRobots. MICROMACHINES 2020; 11:E947. [PMID: 33092054 PMCID: PMC7589118 DOI: 10.3390/mi11100947] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/13/2020] [Revised: 10/13/2020] [Accepted: 10/16/2020] [Indexed: 12/31/2022]
Abstract
An evolving understanding of disease pathogenesis has compelled the development of new drug delivery approaches. Recently, bioinspired microrobots have gained traction as drug delivery systems. By leveraging the microscale phenomena found in physiological systems, these microrobots can be designed with greater maneuverability, which enables more precise, controlled drug release. Their function could be further improved by testing their efficacy in physiologically relevant model systems as part of their development. In parallel with the emergence of microscale robots, organ-on-a-chip technologies have become important in drug discovery and physiological modeling. These systems reproduce organ-level functions in microfluidic devices, and can also incorporate specific biological, chemical, and physical aspects of a disease. This review highlights recent developments in both microrobotics and organ-on-a-chip technologies and envisions their combined use for developing future drug delivery systems.
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Affiliation(s)
- Haley C. Fuller
- Department of Bioengineering, University of Pittsburgh, Pittsburgh, PA 15219, USA; (H.C.F.); (T.-Y.W.); (M.R.B.)
| | - Ting-Yen Wei
- Department of Bioengineering, University of Pittsburgh, Pittsburgh, PA 15219, USA; (H.C.F.); (T.-Y.W.); (M.R.B.)
| | - Michael R. Behrens
- Department of Bioengineering, University of Pittsburgh, Pittsburgh, PA 15219, USA; (H.C.F.); (T.-Y.W.); (M.R.B.)
| | - Warren C. Ruder
- Department of Bioengineering, University of Pittsburgh, Pittsburgh, PA 15219, USA; (H.C.F.); (T.-Y.W.); (M.R.B.)
- Department of Mechanical Engineering, Carnegie Mellon University, Pittsburgh, PA 15213, USA
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Sweet E, Mehta R, Xu Y, Jew R, Lin R, Lin L. Finger-powered fluidic actuation and mixing via MultiJet 3D printing. LAB ON A CHIP 2020; 20:3375-3385. [PMID: 32766613 DOI: 10.1039/d0lc00488j] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
Additive manufacturing, or three-dimensional (3D) printing, has garnered significant interest in recent years towards the fabrication of sub-millimeter scale devices for an ever-widening array of chemical, biological and biomedical applications. Conventional 3D printed fluidic systems, however, still necessitate the use of non-portable, high-powered external off-chip sources of fluidic actuation, such as electro-mechanical pumps and complex pressure-driven controllers, thus limiting their scope towards point-of-need applications. This work proposes entirely 3D printed sources of human-powered fluidic actuation which can be directly incorporated into the design of any 3D printable sub-millifluidic or microfluidic system where electrical power-free operation is desired. Multiple modular, single-fluid finger-powered actuator (FPA) designs were fabricated and experimentally characterized. Furthermore, a new 3D fluidic one-way valve concept employing a dynamic bracing mechanism was developed, demonstrating a high diodicity of ∼1117.4 and significant reduction in back-flow from the state-of-the-art. As a result, fabricated FPA prototypes achieved tailorable experimental fluid flow rates from ∼100 to ∼3000 μL min-1 without the use of electricity. Moreover, a portable human-powered two-fluid pulsatile fluidic mixer, capable of generating fully-mixed fluids in 10 seconds, is presented, demonstrating the application of FPAs towards on-chip integration into more complex 3D printed fluidic networks.
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Affiliation(s)
- Eric Sweet
- Department of Mechanical Engineering, University of California, Berkeley, USA.
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