Large-scale variations in the dynamics of Amazon forest canopy gaps from airborne lidar data and opportunities for tree mortality estimates

Tracking tree demography and forest dynamics at scale using remote sensing

Capturing how tree growth and survival vary through space and time is critical to understanding the structure and dynamics of tree-dominated ecosystems. However, characterising demographic processes at scale is inherently challenging, as trees are slow-growing, long-lived and cover vast expanses of land. We used repeat airborne laser scanning data acquired across 25 km2 of semi-arid, old-growth temperate woodland in Western Australia to track the height growth, crown expansion and mortality of 42 213 individual trees over 9 yr. We found that demographic rates are constrained by a combination of tree size, competition and topography. After initially investing in height growth, trees progressively shifted to crown expansion as they grew larger, while mortality risk decreased considerably with size. Across the landscape, both tree growth and survival increased with topographic wetness, resulting in vegetation patterns that are strongly spatially structured. Moreover, biomass gains from woody growth generally outpaced losses from mortality, suggesting these old-growth woodlands remain a net carbon sink in the absence of wildfires. Our study sheds new light on the processes that shape the dynamics and spatial structure of semi-arid woody ecosystems and provides a roadmap for using emerging remote sensing technologies to track tree demography at scale.

Sensing Forests Directly: The Power of Permanent Plots

The need to measure, monitor, and understand our living planet is greater than ever. Yet, while many technologies are applied to tackle this need, one developed in the 19th century is transforming tropical ecology. Permanent plots, in which forests are directly sensed tree-by-tree and species-by-species, already provide a global public good. They could make greater contributions still by unlocking our potential to understand future ecological change, as the more that computational and remote technologies are deployed the greater the need to ground them with direct observations and the physical, nature-based skills of those who make them. To achieve this requires building profound connections with forests and disadvantaged communities and sustaining these over time. Many of the greatest needs and opportunities in tropical forest science are therefore not to be found in space or in silico, but in vivo, with the people, places and plots who experience nature directly. These are fundamental to understanding the health, predicting the future, and exploring the potential of Earth's richest ecosystems. Now is the time to invest in the tropical field research communities who make so much possible.

Multimodal remote sensing application for weed competition time series analysis in maize farmland ecosystems

Although weeds cause serious harm to crops through competition for resources, they also have ecological functions. We need to study the change law of competition between crops and weeds, and achieve scientific farmland weed management under the premise of protecting weed biodiversity. In the research, we perform a competitive experiment in Harbin, China, in 2021, with five periods of maize as the study subjects. Comprehensive competition indices (CCI-A) based on maize phenotypes were used to describe the dynamic processes and results of weeds competition. The relation between in structural and biochemical information of maize and weed competitive intensity (Levels 1-5) at different periods and the effects on yield parameters were analyzed. The results showed that the differences of maize plant height, stalk thickness, and N and P elements among different competition levels (Levels 1-5) changed significantly with increasing competition time. This directly resulted in 10%, 31%, 35% and 53% decrease in maize yield; and 3%, 7%, 9% and 15% decrease in hundred grain weight. Compared to the conventional competition indices, CCI-A had better dispersion in the last four periods and was more suitable for quantifying the time-series response of competition. Then, multi-source remote sensing technologies are applied to reveal the temporal response of spectral and lidar information to community competition. The first-order derivatives of the spectra indicate that the red edge (RE) of competition stressed plots biased in short-wave direction in each period. With increasing competition time, RE of Levels 1-5 shifted towards the long wave direction as a whole. The coefficients of variation of canopy height model (CHM) indicate that weed competition had a significant effect on CHM. Finally, the deep learning model with multimodal data (Mul-3DCNN) is created to achieve a large range of CCI-A predictions for different periods, and achieves a prediction accuracy of R2 = 0.85 and RMSE = 0.095. Overall, this study use of CCI-A indices combined with multimodal temporal remote sensing imagery and DL to achieve large scale prediction of weed competitiveness in different periods of maize.

Using high-resolution LiDAR-derived canopy structure and topography to characterise hibernaculum locations of the hazel dormouse

The hazel dormouse is predominantly an arboreal species that moves down to the ground to hibernate in the autumn in temperate parts of its distributional ranges at locations not yet well understood. The main objective of this study is to test whether environmental characteristics surrounding hazel dormouse hibernacula can be identified using high-resolution remote sensing and data collected in situ. To achieve this, remotely sensed variables, including canopy height and cover, topographic slope, sky view, solar radiation and cold air drainage, were modelled around 83 dormouse hibernacula in England (n = 62) and the Netherlands (n = 21), and environmental characteristics that may be favoured by pre-hibernating dormice were identified. Data on leaf litter depth, temperature, canopy cover and distance to the nearest tree were collected in situ and analysed at hibernaculum locations in England. The findings indicated that remotely sensed data were effective in identifying attributes surrounding the locations of dormouse hibernacula and when compared to in situ information, provided more conclusive results. This study suggests that remotely sensed topographic slope, canopy height and sky view have an influence on hazel dormice choosing suitable locations to hibernate; whilst in situ data suggested that average daily mean temperature at the hibernaculum may also have an effect. Remote sensing proved capable of identifying localised environmental characteristics in the wider landscape that may be important for hibernating dormice. This study proposes that this method can provide a novel progression from habitat modelling to conservation management for the hazel dormouse, as well as other species using habitats where topography and vegetation structure influence fine-resolution favourability.

Damage to living trees contributes to almost half of the biomass losses in tropical forests

Accurate estimates of forest biomass stocks and fluxes are needed to quantify global carbon budgets and assess the response of forests to climate change. However, most forest inventories consider tree mortality as the only aboveground biomass (AGB) loss without accounting for losses via damage to living trees: branchfall, trunk breakage, and wood decay. Here, we use ~151,000 annual records of tree survival and structural completeness to compare AGB loss via damage to living trees to total AGB loss (mortality + damage) in seven tropical forests widely distributed across environmental conditions. We find that 42% (3.62 Mg ha^-1  year^-1 ; 95% confidence interval [CI] 2.36-5.25) of total AGB loss (8.72 Mg ha^-1  year^-1 ; CI 5.57-12.86) is due to damage to living trees. Total AGB loss was highly variable among forests, but these differences were mainly caused by site variability in damage-related AGB losses rather than by mortality-related AGB losses. We show that conventional forest inventories overestimate stand-level AGB stocks by 4% (1%-17% range across forests) because assume structurally complete trees, underestimate total AGB loss by 29% (6%-57% range across forests) due to overlooked damage-related AGB losses, and overestimate AGB loss via mortality by 22% (7%-80% range across forests) because of the assumption that trees are undamaged before dying. Our results indicate that forest carbon fluxes are higher than previously thought. Damage on living trees is an underappreciated component of the forest carbon cycle that is likely to become even more important as the frequency and severity of forest disturbances increase.

Universal photonics tomography

3D imaging is essential for the study and analysis of a wide variety of structures in numerous applications. Coherent photonic systems such as optical coherence tomography (OCT) and light detection and ranging (LiDAR) are state-of-the-art approaches, and their current implementation can operate in regimes that range from under a few millimeters to over more than a kilometer. We introduce a general method, which we call universal photonics tomography (UPT), for analyzing coherent tomography systems, in which conventional methods such as OCT and LiDAR may be viewed as special cases. We demonstrate a novel approach (to our knowledge) based on the use of phase modulation combined with multirate signal processing to collect positional information of objects beyond the Nyquist limits.

Deciphering the fingerprint of disturbance on the three-dimensional structure of the world's forests

Canopy gaps and the processes that generate them play an integral role in shaping the structure and dynamics of forests. However, it is only with recent advances in remote sensing technologies such as airborne laser scanning that studying canopy gaps at scale has become a reality. Consequently, we still lack an understanding of how the size distribution and spatial organization of canopy gaps varies among forests ecosystems, nor have we determined whether these emergent properties can be reconciled with existing theories of forest dynamics. Here, I outline a roadmap for integrating remote sensing with field data and individual-based models to build a comprehensive picture of how environmental constraints and disturbance regimes shape the three-dimensional structure of the world's forests.

Qualifying the Information Detected from Airborne Laser Scanning to Support Tropical Forest Management Operational Planning

(1) Background: Forests throughout the world are managed to fulfil a range of commercial and ecosystem services. The same applies to managed areas of the Amazon forest. We explore a method of sustainable forest management (SFM) which anticipates the result of processes of natural mortality of large, mature trees that could fall and damage their neighbors. Collecting all the information required for planning logging in the Brazilian Amazon is, currently, a hard, time-consuming and expensive task. (2) Methods: This information can be obtained more quickly, accurately and objectively by including airborne laser scanning (ALS) products in the operational plan. We used ALS point clouds to isolate emergent crowns from the canopy height model. Then, we performed field work to validate the existence of these trees, and to understand how many commercial trees (tree diameter ≥ 50 cm) we identified by orienting the trees search through the emergent canopy model. (3) Results: We were able to detect 184 (54.4%) trees from 338 field-recorded individuals in 20 plots (totaling 8 ha). Of the detected trees, 66 individuals were classified as having potential for commerce. Furthermore, 58 individuals presented the best stem quality for logging, which represents more than seven high quality commercial trees per hectare. The logistic regression showed that the effects that positively influence the emergent crown formation are strongly presented in the commercial species. (4) Conclusions: Using airborne laser scanning can improve the SFM planning in a structurally complex, dense and mixed composition tropical forest by reducing field work in the initial stages of management. Therefore, we propose that ALS operational planning can be used to more efficiently direct field surveys without the need for a full census.