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Tehami M, Imam HT, Abdullah I, Hosford J, Wong XJ, Rahman NA, Wong LS. Biocatalytic Generation of o-Quinone Imines in the Synthesis of 1,4-Benzoxazines and Its Comparative Green Chemistry Metrics. ACS SUSTAINABLE CHEMISTRY & ENGINEERING 2024; 12:2678-2685. [PMID: 38389905 PMCID: PMC10880089 DOI: 10.1021/acssuschemeng.3c06758] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/19/2023] [Revised: 01/09/2024] [Accepted: 01/10/2024] [Indexed: 02/24/2024]
Abstract
1,4-Benzoxazines are important motifs in many pharmaceuticals and can be formed by a reaction sequence involving the oxidation of o-aminophenols to their corresponding quinone imine followed by an in situ inverse electron demand Diels-Alder (IEDDA) cycloaddition with a suitable dienophile. Reported herein is the development of a reaction sequence that employs horseradish peroxidase to catalyze the oxidation of the aminophenols prior to the IEDDA as a more sustainable alternative to the use of conventional stoichiometric oxidants. The synthesis of 10 example benzoxazines is demonstrated in this "one-pot, two-step" procedure with yields between 42% and 92%. The green chemistry metrics, including the E-factor and generalized reaction mass efficiency, for this biocatalytic reaction were compared against the conventional chemical approach. It was found that the reported biocatalytic route was approximately twice as green by these measures.
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Affiliation(s)
- Maryam Tehami
- Manchester
Institute of Biotechnology, University of
Manchester, 131 Princess Street, M1 7DN Manchester, United Kingdom
- Department
of Chemistry, University of Manchester, Oxford Road, M13 9PL Manchester, United Kingdom
| | - Hasan Tanvir Imam
- Manchester
Institute of Biotechnology, University of
Manchester, 131 Princess Street, M1 7DN Manchester, United Kingdom
- Department
of Chemistry, University of Manchester, Oxford Road, M13 9PL Manchester, United Kingdom
| | - Iskandar Abdullah
- Manchester
Institute of Biotechnology, University of
Manchester, 131 Princess Street, M1 7DN Manchester, United Kingdom
- Department
of Chemistry, University of Manchester, Oxford Road, M13 9PL Manchester, United Kingdom
- Department
of Chemistry, Faculty of Science, Universiti
Malaya, 50603 Kuala Lumpur, Malaysia
| | - Joseph Hosford
- Manchester
Institute of Biotechnology, University of
Manchester, 131 Princess Street, M1 7DN Manchester, United Kingdom
- Department
of Chemistry, University of Manchester, Oxford Road, M13 9PL Manchester, United Kingdom
| | - Xiao Juie Wong
- Department
of Chemistry, University of Manchester, Oxford Road, M13 9PL Manchester, United Kingdom
| | | | - Lu Shin Wong
- Manchester
Institute of Biotechnology, University of
Manchester, 131 Princess Street, M1 7DN Manchester, United Kingdom
- Department
of Chemistry, University of Manchester, Oxford Road, M13 9PL Manchester, United Kingdom
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2
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Cvjetan N, Schuler LD, Ishikawa T, Walde P. Optimization and Enhancement of the Peroxidase-like Activity of Hemin in Aqueous Solutions of Sodium Dodecylsulfate. ACS OMEGA 2023; 8:42878-42899. [PMID: 38024761 PMCID: PMC10652838 DOI: 10.1021/acsomega.3c05915] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/11/2023] [Revised: 10/10/2023] [Accepted: 10/13/2023] [Indexed: 12/01/2023]
Abstract
Iron porphyrins play several important roles in present-day living systems and probably already existed in very early life forms. Hemin (= ferric protoporphyrin IX = ferric heme b), for example, is the prosthetic group at the active site of heme peroxidases, catalyzing the oxidation of a number of different types of reducing substrates after hemin is first oxidized by hydrogen peroxide as the oxidizing substrate of the enzyme. The active site of heme peroxidases consists of a hydrophobic pocket in which hemin is embedded noncovalently and kept in place through coordination of the iron atom to a proximal histidine side chain of the protein. It is this partially hydrophobic local environment of the enzyme which determines the efficiency with which the sequential reactions of the oxidizing and reducing substrates proceed at the active site. Free hemin, which has been separated from the protein moiety of heme peroxidases, is known to aggregate in an aqueous solution and exhibits low catalytic activity. Based on previous reports on the use of surfactant micelles to solubilize free hemin in a nonaggregated state, the peroxidase-like activity of hemin in the presence of sodium dodecyl sulfate (SDS) at concentrations below and above the critical concentration for SDS micelle formation (critical micellization concentration (cmc)) was systematically investigated. In most experiments, 3,3',5,5'-tetramethylbenzidine (TMB) was applied as a reducing substrate at pH = 7.2. The presence of SDS clearly had a positive effect on the reaction in terms of initial reaction rate and reaction yield, even at concentrations below the cmc. The highest activity correlated with the cmc value, as demonstrated for reactions at three different HEPES concentrations. The 4-(2-hydroxyethyl)-1-piperazineethanesulfonate salt (HEPES) served as a pH buffer substance and also had an accelerating effect on the reaction. At the cmc, the addition of l-histidine (l-His) resulted in a further concentration-dependent increase in the peroxidase-like activity of hemin until a maximal effect was reached at an optimal l-His concentration, probably corresponding to an ideal mono-l-His ligation to hemin. Some of the results obtained can be understood on the basis of molecular dynamics simulations, which indicated the existence of intermolecular interactions between hemin and HEPES and between hemin and SDS. Preliminary experiments with SDS/dodecanol vesicles at pH = 7.2 showed that in the presence of the vesicles, hemin exhibited similar peroxidase-like activity as in the case of SDS micelles. This supports the hypothesis that micelle- or vesicle-associated ferric or ferrous iron porphyrins may have played a role as primitive catalysts in membranous prebiotic compartment systems before cellular life emerged.
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Affiliation(s)
- Nemanja Cvjetan
- Department
of Materials, ETH-Zürich, Leopold-Ruzicka-Weg 4, 8093 Zürich, Switzerland
| | | | - Takashi Ishikawa
- Department
of Biology and Chemistry, Paul Scherrer Institute and Department of
Biology, ETH-Zürich, Forschungsstrasse 111, 5232 Villigen PSI, Switzerland
| | - Peter Walde
- Department
of Materials, ETH-Zürich, Leopold-Ruzicka-Weg 4, 8093 Zürich, Switzerland
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3
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Leng Y, Liu F, Cai H, Chang F, Xiong W, Huang S, Wang J. Mechanism of norfloxacin transformation by horseradish peroxidase and various redox mediated by humic acid and microplastics. THE SCIENCE OF THE TOTAL ENVIRONMENT 2023; 858:159528. [PMID: 36270366 DOI: 10.1016/j.scitotenv.2022.159528] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/15/2022] [Revised: 10/12/2022] [Accepted: 10/13/2022] [Indexed: 06/16/2023]
Abstract
The catalysis of HRP coupling with redox mediator was a feasible technology for the transformation of antibiotics. This work screened three effective redox mediators syringaldehyde (SYR), acetosyringone (AS) and p-coumaric acid (PCA) for the norfloxacin (NOR) transformation in HRP/redox mediator system. Then, compared their transformation characteristics under varying conditions. The molecular docking results indicated HRP catalytic mediator was spontaneous, and the absolute value order of free energy between three redox mediators and HRP was consistent with the order of NOR removal in experiment. The presence of humic acid (HA) and polystyrene (PS) microplastics could block the removal of NOR, and the inhibition effect was proportional to the level of HA and PS particles. Seven and six possible intermediate products were identified by using SYR/AS and PCA as redox mediators, respectively, and potential NOR transformation pathways were proposed. SYR and AS treatment had the same transformation products and pathways due to their similar structure, including defluorination, oxidation, cross-coupled with mediator, demethylation and dehydrogenation. While for the PCA group, NOR not only performed the above action (except defluorination), but also underwent decarbonylation. These findings may expand our knowledge of the conversion and fate of fluoroquinolones through HRP coupled with redox mediator in the environment.
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Affiliation(s)
- Yifei Leng
- School of Civil Engineering, Architecture and Environment, Hubei University of Technology, Wuhan 430068, PR China
| | - Feiyu Liu
- School of Civil Engineering, Architecture and Environment, Hubei University of Technology, Wuhan 430068, PR China
| | - Huiping Cai
- Wuhan Municipal Ecology and Environment Bureau, Jianghan Branch, Wuhan 430015, PR China
| | - Fengyi Chang
- School of Civil Engineering, Architecture and Environment, Hubei University of Technology, Wuhan 430068, PR China
| | - Wen Xiong
- School of Civil Engineering, Architecture and Environment, Hubei University of Technology, Wuhan 430068, PR China
| | - Shushi Huang
- Institute of Eco-Environmental Research, Guangxi Academy of Sciences, Nanning 530007, PR China.
| | - Jun Wang
- College of Marine Sciences, South China Agricultural University, Guangzhou 510642, PR China; Institute of Eco-Environmental Research, Guangxi Academy of Sciences, Nanning 530007, PR China.
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4
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Bej S, Ghosh M, Das R, Banerjee P. Evaluation of nanomaterials-grafted enzymes for application in contaminants degradation: Need of the hour with proposed IoT synchronized nanosensor fit sustainable clean water technology in en masse. J INDIAN CHEM SOC 2022. [DOI: 10.1016/j.jics.2022.100429] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
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5
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Barbhuiya NH, Misra U, Singh SP. Biocatalytic membranes for combating the challenges of membrane fouling and micropollutants in water purification: A review. CHEMOSPHERE 2022; 286:131757. [PMID: 34371356 DOI: 10.1016/j.chemosphere.2021.131757] [Citation(s) in RCA: 16] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/08/2021] [Revised: 07/17/2021] [Accepted: 07/30/2021] [Indexed: 06/13/2023]
Abstract
Over the last few years, the list of water contaminants has grown tremendously due to many anthropogenic activities. Various conventional technologies are available for water and wastewater treatment. However, micropollutants of emerging concern (MEC) are posing a great threat due to their activity at trace concentration and poor removal efficiency by the conventional treatment processes. Advanced technology like membrane technology can remove MEC to some extent. However, issues like the different chemical properties of MEC, selectivity, and fouling of membranes can affect the removal efficiency. Moreover, the concentrate from the membrane filtration may need further treatment. Enzymatic degradation of pollutants and foulants is one of the green approaches for removing various contaminants from the water as well as mitigating membrane fouling. Biocatalytic membranes (BCMs), in which enzymes are immobilized on membranes, combines the advantages of membrane separation and enzymatic degradation. This review article discussed various commonly used enzymes in BCMs for removing MEC and fouling. The majorly used enzymes were oxidoreductases and hydrolases for removing MEC, antifouling, and self-cleaning ability. The various BCM synthesis processes based on entrapment, crosslinking, and binding have been summarized, along with the effects of the addition of the nanoparticles on the performances of the BCMs. The scale-up, commercial viability, challenges, and future direction for improving BCMs have been discussed and shown bright possibilities for these new generation membranes.
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Affiliation(s)
- Najmul Haque Barbhuiya
- Environmental Science and Engineering Department (ESED), Indian Institute of Technology Bombay, Mumbai, 400076, India
| | - Utkarsh Misra
- Environmental Science and Engineering Department (ESED), Indian Institute of Technology Bombay, Mumbai, 400076, India; Centre for Research in Nanotechnology & Science (CRNTS), Indian Institute of Technology Bombay, Mumbai, 400076, India
| | - Swatantra P Singh
- Environmental Science and Engineering Department (ESED), Indian Institute of Technology Bombay, Mumbai, 400076, India; Centre for Research in Nanotechnology & Science (CRNTS), Indian Institute of Technology Bombay, Mumbai, 400076, India; Interdisciplinary Program in Climate Studies (IDPCS), Indian Institute of Technology Bombay, Mumbai, 400076, India.
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6
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Kurisu M, Kissner R, Imai M, Walde P. Application of an enzymatic cascade reaction for the synthesis of the emeraldine salt form of polyaniline. CHEMICAL PAPERS 2021. [DOI: 10.1007/s11696-021-01620-z] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
Abstract
AbstractThe synthesis of the emeraldine salt form of polyaniline (PANI-ES) from aniline with Aspergillus sp. glucose oxidase (GOD), d-glucose, dissolved O2, and horseradish peroxidase isoenzyme C (HRPC) in the presence of large unilamellar vesicles of AOT (sodium bis-(2-ethylhexyl)sulfosuccinate) as templates at pH = 4.3 and T ~ 25 °C was investigated in a systematic way. In this cascade reaction mixture, the oxidation of aniline is catalyzed by HRPC with H2O2 that is formed in situ as byproduct of the GOD-catalyzed oxidation of d-glucose with O2. Under the elaborated experimental conditions which we considered ideal, the formation of PANI-ES products is evident, as judged by UV/Vis/NIR and EPR measurements. Comparison was made with a reference reaction, which was run under similar conditions with added H2O2 instead of GOD and d-glucose. Although the reference reaction was found to be superior, with the cascade reaction, PANI-ES products can still be obtained with high aniline conversion (> 90%) within 24 h as stable dark green PANI-ES/AOT vesicle dispersion. Our results show that the in situ formation of H2O2 does not prevent the inactivation of HRPC known to occur in the reference reaction. Moreover, the GOD used in the cascade reaction is inactivated as well by polymerization intermediates.
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Preparation and Characterization of Polyamidoamine G2.0-Hematin as a Biocatalyst for Fabricating Catecholic Gelatin Hydrogel. INT J POLYM SCI 2021. [DOI: 10.1155/2021/5563229] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
In this study, we report that an enzyme-mimicking biocatalyst polyamidoamine (PAMAM) dendrimer G2.0-hematin (G2.0-He) was fabricated successfully. The chemical structure of G2.0-He was verified by 1H NMR and FT-IR spectroscopy. G2.0-He exhibited a size distribution from
to
and a zeta potential from 32.5 mV to 25.6 mV along with the enhancement of the hematin conjugation degree. The relative activity of G2.0-He was evaluated based on pyrogallol oxidation reactions at
. The results showed that G2.0-He was more stable than horseradish peroxidase (HRP) enzyme in high H2O2 concentrations. The HRP-mimic ability of G2.0-He was also confirmed by the catalyzation when preparing catecholic gelatin hydrogels under mild conditions. Moreover, our results also revealed that these hydrogels performed with excellent cytocompatibility in an in vitro study and could be used as a potential scaffold for adhesion and proliferation of fibroblast cells. The obtained results indicated that G2.0-He is a suitable platform for altering the HRP enzyme in several biomedical applications.
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8
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Schlagintweit JF, Altmann PJ, Böth AD, Hofmann BJ, Jandl C, Kaußler C, Nguyen L, Reich RM, Pöthig A, Kühn FE. Activation of Molecular Oxygen by a Cobalt(II) Tetra-NHC Complex*. Chemistry 2021; 27:1311-1315. [PMID: 33125815 PMCID: PMC7898330 DOI: 10.1002/chem.202004758] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/29/2020] [Indexed: 11/24/2022]
Abstract
The first dicobalt(III) μ2 -peroxo N-heterocyclic carbene (NHC) complex is reported. It can be quantitatively generated from a cobalt(II) compound bearing a 16-membered macrocyclic tetra-NHC ligand via facile activation of dioxygen from air at ambient conditions. The reaction proceeds via an end-on superoxo intermediate as demonstrated by EPR studies and DFT. The peroxo moiety can be cleaved upon addition of acetic acid, yielding the corresponding CoIII acetate complex going along with H2 O2 formation. In contrast, both CoII and CoIII complexes are also studied as catalysts to utilize air for olefin and alkane oxidation reactions; however, not resulting in product formation. The observations are rationalized by DFT-calculations, suggesting a nucleophilic nature of the dicobalt(III) μ2 -peroxo complex. All isolated compounds are characterized by NMR, ESI-MS, elemental analysis, EPR and SC-XRD.
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Affiliation(s)
- Jonas F. Schlagintweit
- Molecular CatalysisCatalysis Research Center and Department of ChemistryTechnische Universität MünchenLichtenbergstraße 485747Garching bei MünchenGermany
| | - Philipp J. Altmann
- Molecular CatalysisCatalysis Research Center and Department of ChemistryTechnische Universität MünchenLichtenbergstraße 485747Garching bei MünchenGermany
- Single Crystal XRD Laboratory of the Catalysis Research CenterTechnische Universität MünchenErnst-Otto-Fischer-Str. 185747Garching bei MünchenGermany
| | - Alexander D. Böth
- Molecular CatalysisCatalysis Research Center and Department of ChemistryTechnische Universität MünchenLichtenbergstraße 485747Garching bei MünchenGermany
| | - Benjamin J. Hofmann
- Molecular CatalysisCatalysis Research Center and Department of ChemistryTechnische Universität MünchenLichtenbergstraße 485747Garching bei MünchenGermany
| | - Christian Jandl
- Single Crystal XRD Laboratory of the Catalysis Research CenterTechnische Universität MünchenErnst-Otto-Fischer-Str. 185747Garching bei MünchenGermany
| | - Clemens Kaußler
- Molecular CatalysisCatalysis Research Center and Department of ChemistryTechnische Universität MünchenLichtenbergstraße 485747Garching bei MünchenGermany
| | - Linda Nguyen
- Molecular CatalysisCatalysis Research Center and Department of ChemistryTechnische Universität MünchenLichtenbergstraße 485747Garching bei MünchenGermany
- Ausbildungszentrum der Technischen Universität MünchenTechnische Universität MünchenLichtenbergstraße 485747Garching bei MünchenGermany
| | - Robert M. Reich
- Molecular CatalysisCatalysis Research Center and Department of ChemistryTechnische Universität MünchenLichtenbergstraße 485747Garching bei MünchenGermany
| | - Alexander Pöthig
- Single Crystal XRD Laboratory of the Catalysis Research CenterTechnische Universität MünchenErnst-Otto-Fischer-Str. 185747Garching bei MünchenGermany
| | - Fritz E. Kühn
- Molecular CatalysisCatalysis Research Center and Department of ChemistryTechnische Universität MünchenLichtenbergstraße 485747Garching bei MünchenGermany
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9
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Nanocapsulation of horseradish peroxidase (HRP) enhances enzymatic performance in removing phenolic compounds. Int J Biol Macromol 2020; 150:814-822. [DOI: 10.1016/j.ijbiomac.2020.02.043] [Citation(s) in RCA: 32] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/06/2019] [Revised: 01/29/2020] [Accepted: 02/05/2020] [Indexed: 12/13/2022]
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10
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Pham TN, Jiang YS, Su CF, Jan JS. In situ formation of silver nanoparticles-contained gelatin-PEG-dopamine hydrogels via enzymatic cross-linking reaction for improved antibacterial activities. Int J Biol Macromol 2020; 146:1050-1059. [DOI: 10.1016/j.ijbiomac.2019.09.230] [Citation(s) in RCA: 19] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2019] [Revised: 09/23/2019] [Accepted: 09/24/2019] [Indexed: 02/07/2023]
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11
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Han S, Cui Y, Helbing DL. Inactivation of Horseradish Peroxidase by Acid for Sequential Chemiluminescent Western Blot. Biotechnol J 2019; 15:e1900397. [PMID: 31647189 DOI: 10.1002/biot.201900397] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/04/2019] [Indexed: 11/11/2022]
Abstract
Chemiluminescent western blot (WB) is often performed sequentially for detection of overlapping proteins; in between, prior antibodies must be stripped or the conjugated horseradish peroxidase (HRP) inactivated. However, often, stripping either is insufficient to remove all the bound antibodies or causes protein loss, whereas treatment with hydrogen peroxide, a popular way to inactivate HRP, may affect epitope recognition as the authors previously reported. To date, an ideal method for sequential chemiluminescent WB is still missing. Here it is demonstrated that acid equivalent to 10% acetic acid can efficiently inactivate HRP, allowing sequential probing without protein loss or epitope damage.
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Affiliation(s)
- Shuting Han
- Leibniz Institute on Aging, Fritz Lipmann Institute, 07745, Jena, Germany.,Department of Medical Oncology, Sir Run Run Shaw Hospital, Medical School of Zhejiang University, 310016, Hangzhou, China
| | - Yan Cui
- Leibniz Institute on Aging, Fritz Lipmann Institute, 07745, Jena, Germany
| | - Dario L Helbing
- Leibniz Institute on Aging, Fritz Lipmann Institute, 07745, Jena, Germany.,Faculty of Medicine, Friedrich-Schiller-University Jena, 07743, Jena, Germany
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Kinetic Study of Peroxidase-Catalyzed Oxidation of 2-Hydroxyanthracene and 9-Phenanthrol in Presence of Biosurfactant Escin. Catalysts 2019. [DOI: 10.3390/catal9070591] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022] Open
Abstract
The kinetics of fungal peroxidase-catalyzed 2-hydroxyanthracene and 9-phenanthrol oxidation was investigated in presence of biosurfactant escin at pH 5.5 and 25 °C. The kinetic measurements were performed using the fluorimetric method and the critical micelle concentration (CMC) of escin was determined using the dynamic light scattering technique. Inactivation of peroxidase was observed in absence of biosurfactant escin. It was shown that escin, used in concentrations lower than CMC, decreases or completely stops the peroxidase inactivation and increases the conversion of 2-hydroxyanthracene as well as of 9-phenanthrol. The environmentally friendly method of peroxidase-catalyzed 2-hydroxyanthracene and 9-phenanthrol oxidation in presence of biosurfactant Escin has an advantage over traditional decontamination methods due to their less environmental impact.
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13
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Petrović DM, Bissaro B, Chylenski P, Skaugen M, Sørlie M, Jensen MS, Aachmann FL, Courtade G, Várnai A, Eijsink VGH. Methylation of the N-terminal histidine protects a lytic polysaccharide monooxygenase from auto-oxidative inactivation. Protein Sci 2019; 27:1636-1650. [PMID: 29971843 DOI: 10.1002/pro.3451] [Citation(s) in RCA: 79] [Impact Index Per Article: 15.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/09/2018] [Revised: 06/01/2018] [Accepted: 06/04/2018] [Indexed: 12/29/2022]
Abstract
The catalytically crucial N-terminal histidine (His1) of fungal lytic polysaccharide monooxygenases (LPMOs) is post-translationally modified to carry a methylation. The functional role of this methylation remains unknown. We have carried out an in-depth functional comparison of two variants of a family AA9 LPMO from Thermoascus aurantiacus (TaLPMO9A), one with, and one without the methylation on His1. Various activity assays showed that the two enzyme variants are identical in terms of substrate preferences, cleavage specificities and the ability to activate molecular oxygen. During the course of this work, new functional features of TaLPMO9A were discovered, in particular the ability to cleave xyloglucan, and these features were identical for both variants. Using a variety of techniques, we further found that methylation has minimal effects on the pKa of His1, the affinity for copper and the redox potential of bound copper. The two LPMOs did, however, show clear differences in their resistance against oxidative damage. Studies with added hydrogen peroxide confirmed recent claims that low concentrations of H2 O2 boost LPMO activity, whereas excess H2 O2 leads to LPMO inactivation. The methylated variant of TaLPMO9A, produced in Aspergillus oryzae, was more resistant to excess H2 O2 and showed better process performance when using conditions that promote generation of reactive-oxygen species. LPMOs need to protect themselves from reactive oxygen species generated in their active sites and this study shows that methylation of the fully conserved N-terminal histidine provides such protection.
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Affiliation(s)
- Dejan M Petrović
- Faculty of Chemistry, Biotechnology and Food Science, Norwegian University of Life Sciences (NMBU), Ås, Norway
| | - Bastien Bissaro
- Faculty of Chemistry, Biotechnology and Food Science, Norwegian University of Life Sciences (NMBU), Ås, Norway
| | - Piotr Chylenski
- Faculty of Chemistry, Biotechnology and Food Science, Norwegian University of Life Sciences (NMBU), Ås, Norway
| | - Morten Skaugen
- Faculty of Chemistry, Biotechnology and Food Science, Norwegian University of Life Sciences (NMBU), Ås, Norway
| | - Morten Sørlie
- Faculty of Chemistry, Biotechnology and Food Science, Norwegian University of Life Sciences (NMBU), Ås, Norway
| | - Marianne S Jensen
- Faculty of Chemistry, Biotechnology and Food Science, Norwegian University of Life Sciences (NMBU), Ås, Norway
| | - Finn L Aachmann
- Department of Biotechnology and Food Science, NOBIPOL, Norwegian University of Science and Technology (NTNU), Trondheim, Norway
| | - Gaston Courtade
- Department of Biotechnology and Food Science, NOBIPOL, Norwegian University of Science and Technology (NTNU), Trondheim, Norway
| | - Anikó Várnai
- Faculty of Chemistry, Biotechnology and Food Science, Norwegian University of Life Sciences (NMBU), Ås, Norway
| | - Vincent G H Eijsink
- Faculty of Chemistry, Biotechnology and Food Science, Norwegian University of Life Sciences (NMBU), Ås, Norway
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14
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Wang M, Chen Y, Kickhoefer VA, Rome LH, Allard P, Mahendra S. A Vault-Encapsulated Enzyme Approach for Efficient Degradation and Detoxification of Bisphenol A and Its Analogues. ACS SUSTAINABLE CHEMISTRY & ENGINEERING 2019; 7:5808-5817. [PMID: 36419408 PMCID: PMC9681160 DOI: 10.1021/acssuschemeng.8b05432] [Citation(s) in RCA: 20] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/27/2023]
Abstract
We report an effective and environmentally sustainable water treatment approach using enzymes encapsulated in biogenic vault nanoparticles. Manganese peroxidase (MnP), whose stability was remarkably extended by encapsulating into vaults, rapidly catalyzed the biotransformation of endocrine-disrupting compounds, including bisphenol A (BPA), bisphenol F (BPF), and bisphenol AP (BPAP). The vault-encapsulated MnP (vMnP) treatment removed 80-95% of each of the tested bisphenols (BPs) at lower enzyme dosage, while free native MnP (nMnP) only resulted in a 19-36% removal, over a 24-h period. Treatment by vMnP and nMnP resulted in considerable disparities in product species and abundance, which were consistent with the observed changes in the estrogenic activities of BPs. To test if vMnP-catalyzed transformations generated toxic intermediates, we assessed biological hallmarks of BP toxicity, namely, the ability to disrupt reproductive processes. The toxicity of vMnP-treated samples, as measured in the model organism, Caenorhabditis elegans, was dramatically reduced for all three BPs, including the reproductive indicators of BPA exposure such as reduced fertility and increased germ cell death. Collectively, our results indicate that the vMnP system represents an efficient and safe approach for the removal of BPs and promise the development of vault-encapsulated customized enzymes for treating other targeted organic compounds in contaminated waters.
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Affiliation(s)
- Meng Wang
- Department of Civil and Environmental Engineering, University of California, Los Angeles, 420 Westwood Plaza, Los Angeles, California 90095, United States
| | - Yichang Chen
- Molecular Toxicology Interdepartmental Program, University of California, Los Angeles, 650 Charles E Young Drive South, Los Angeles, California 90095, United States
| | - Valerie A. Kickhoefer
- Department of Biological Chemistry, University of California, Los Angeles, 615 Charles E Young Drive South, Los Angeles, California 90095, United States
- Vault Nano Inc., 570 Westwood Plaza, Los Angeles, California 90095, United States
| | - Leonard H. Rome
- Department of Biological Chemistry, University of California, Los Angeles, 615 Charles E Young Drive South, Los Angeles, California 90095, United States
- California Nanosystems Institute, University of California, Los Angeles, 570 Westwood Plaza, Los Angeles, California 90095, United States
| | - Patrick Allard
- Molecular Toxicology Interdepartmental Program, University of California, Los Angeles, 650 Charles E Young Drive South, Los Angeles, California 90095, United States
- Institute for Society & Genetics, University of California, Los Angeles, 621 Charles E Young Drive South, Los Angeles, California 90095, United States
| | - Shaily Mahendra
- Department of Civil and Environmental Engineering, University of California, Los Angeles, 420 Westwood Plaza, Los Angeles, California 90095, United States
- Molecular Toxicology Interdepartmental Program, University of California, Los Angeles, 650 Charles E Young Drive South, Los Angeles, California 90095, United States
- California Nanosystems Institute, University of California, Los Angeles, 570 Westwood Plaza, Los Angeles, California 90095, United States
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15
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Plieth C. Peroxide-Induced Liberation of Iron from Heme Switches Catalysis during Luminol Reaction and Causes Loss of Light and Heterodyning of Luminescence Kinetics. ACS OMEGA 2019; 4:3268-3279. [PMID: 31459543 PMCID: PMC6649120 DOI: 10.1021/acsomega.8b03564] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/19/2018] [Accepted: 01/29/2019] [Indexed: 06/10/2023]
Abstract
The peroxidation of luminol yields bright luminescence when the reaction is catalyzed by heme proteins. However, an excess of peroxide leads to less light and altered luminescence kinetics, an effect commonly referred to as "suicide inactivation". The aim of this study is to present the molecular processes causing this effect. A comprehensive set of data reported here demonstrates that suicide inactivation is due to a peroxide-induced liberation of iron from its coordinating porphyrin. Liberated iron launches catalysis of the reaction at much lower efficiency. The light-yielding efficiencies of different organic and inorganic catalysts are precisely quantified and compared. It is shown that the catalysis by free iron involves superoxide. This is explained by the formation of a ferryl-oxo-iron complex. In this context, a complete reaction mechanism involving a modified Fenton-Haber-Weiss cycle is proposed for the first time. The switch from the highly efficient biogenically catalyzed luminescence to a less efficient inorganically catalyzed reaction is accompanied by a transition from "flash-type" to "glow-type" luminescence kinetics. Ethylenediaminetetraacetic acid-mediated chelation of iron is used to demonstrate this effect and to separate both kinetics. The explanation of kinetic heterodyning is underpinned by mathematical modeling. The results are able to explain the as yet unexplained phenomena discussed in the less recent literature and to settle disputes about them. It is concluded that peroxide concentrations exceeding the level tolerated by the catalyzing heme protein negatively impact performance and precision of luminol-based assays, where the light yield is used as a quantitative measure for analyte concentrations.
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17
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Levin G, Gómez S, Glodowsky A, Cascone O, Hernáiz M. Two-step enzymatic strategy for the synthesis of a smart phenolic polymer and further immobilization of a β-galactosidase able to catalyze transglycosydation reaction. Int J Biol Macromol 2018; 117:264-270. [DOI: 10.1016/j.ijbiomac.2018.05.177] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/20/2018] [Revised: 05/22/2018] [Accepted: 05/23/2018] [Indexed: 10/16/2022]
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18
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Plieth C. Redox Modulators Determine Luminol Luminescence Generated by Porphyrin-Coordinated Iron and May Repress "Suicide Inactivation". ACS OMEGA 2018; 3:12295-12303. [PMID: 31459303 PMCID: PMC6645248 DOI: 10.1021/acsomega.8b01261] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/06/2018] [Accepted: 08/14/2018] [Indexed: 05/29/2023]
Abstract
Iron porphyrin catalysts of the luminol reaction (horseradish peroxidase, hemoglobin, cytochrome c, and hemin) interact with diverse reducing compounds. Here, it is demonstrated how the chemiluminescence yield is modulated by such interactions. The compounds accepted as substrates protect the catalyst against the "suicide inactivation" caused by high peroxide concentrations. The reducing agents not accepted by the catalyst inhibit light production either by generating a futile redox cycle of the luminophore or by irreversibly inactivating the catalytic center. In the case of a futile cycle, light emission resumes as soon as the reducing agents in the reaction are consumed, whereas with an irreversible inactivation, light emission does not recover. The characteristics of luminescence enhancement and quenching depending on interfering agents are also reported here. They reveal details about the relative redox potentials of the involved compounds. It is discussed how this should be considered when the luminol reaction is used for quantitative analyses and when unpurified samples with a broad compound matrix are to be assayed.
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Affiliation(s)
- Christoph Plieth
- Zentrum für Biochemie und Molekularbiologie, Universität Kiel, Am Botanischen Garten 9, 24118 Kiel, Germany
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19
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Development of horseradish peroxidase/layered double hydroxide hybrid catalysis for phenol degradation. RESEARCH ON CHEMICAL INTERMEDIATES 2018. [DOI: 10.1007/s11164-018-3583-x] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
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20
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Yang Y, Li J, Shi H, Zhai L, Wang X, Gao S. Influence of natural organic matter on horseradish peroxidase-mediated removal of 17α-ethinylestradiol: Role of molecular weight. JOURNAL OF HAZARDOUS MATERIALS 2018; 356:9-16. [PMID: 29803032 DOI: 10.1016/j.jhazmat.2018.05.032] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/20/2017] [Revised: 05/14/2018] [Accepted: 05/15/2018] [Indexed: 06/08/2023]
Abstract
Ubiquitous natural organic matter (NOM) plays a crucial role in the peroxidase-mediated transformation of phenolic pollutants in aquatic environment. As a poorly defined polydispersed mixture of assorted organic substances with wide molecular weight (MW) distribution, NOM has far prevented researchers from finding out the primarily responsible components for the specific effect. In this work, MW fractionated NOMs (Mf-NOMs) were used to investigate their roles on horseradish peroxidase (HRP)-mediated transformation of 17α-ethinylestradiol (EE2). The removal rate of EE2 was restrained in the presence of pristine or Mf-NOMs, and the inhibitory mechanism was MW-dependent. Low Mf-NOMs restrained the enzymatic reaction by acting as competitive substrates, while high Mf-NOMs retained freely dissolved EE2 which reduced its availability for enzymatic reaction. The contribution of these two processes to the inhibition induced by pristine NOM was further quantified and found to be relevant to the reaction conditions, especially EE2 concentration. The findings of this work reveal more complex influences of NOM on the enzymatic reaction than ever demonstrated, which aids in understanding the fate of EE2 and other congener contaminants in natural and municipal water.
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Affiliation(s)
- Yun Yang
- State Key Laboratory of Pollution Control and Resource Reuse, School of the Environment, Nanjing University, Nanjing 210093, PR China
| | - Jianhua Li
- Jiangsu Key Laboratory of Chemical Pollution Control and Resources Reuse, School of Environmental and Biological Engineering, Nanjing University of Science and Technology, Nanjing 210094, PR China
| | - Huanhuan Shi
- State Key Laboratory of Pollution Control and Resource Reuse, School of the Environment, Nanjing University, Nanjing 210093, PR China
| | - Li Zhai
- State Key Laboratory of Pollution Control and Resource Reuse, School of the Environment, Nanjing University, Nanjing 210093, PR China
| | - Xing Wang
- State Key Laboratory of Pollution Control and Resource Reuse, School of the Environment, Nanjing University, Nanjing 210093, PR China
| | - Shixiang Gao
- State Key Laboratory of Pollution Control and Resource Reuse, School of the Environment, Nanjing University, Nanjing 210093, PR China.
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21
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Dare NA, Egan TJ. Heterogeneous catalysis with encapsulated haem and other synthetic porphyrins: Harnessing the power of porphyrins for oxidation reactions. OPEN CHEM 2018. [DOI: 10.1515/chem-2018-0083] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023] Open
Abstract
AbstractEncapsulated metalloporphyrins have been widely studied for their use as efficient heterogeneous catalysts, inspired by the known catalytic activity of porphyrins in haemoproteins. The oxidation of organic substrates by haemoproteins is one of the well-known roles of these proteins, in which the haem (ferriprotoporphyrin IX = FePPIX) cofactor is the centre of reactivity. While these porphyrins are highly efficient catalysts in the protein environment, once removed, they quickly lose their reactivity. It is for this reason that they have garnered much interest in the field of heterogeneous catalysis of oxidation reactions. This review details current research in the field, focusing on the application of encapsulated haem, and other synthetic metalloporphyrins, applied to oxidation reactions.
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Affiliation(s)
- Nicola A. Dare
- Department of Chemistry, University of Cape Town, Cape Town, Private Bag, Rondebosch 7701, South Africa
| | - Timothy J. Egan
- Department of Chemistry, University of Cape Town, Cape Town, Private Bag, Rondebosch 7701, South Africa
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22
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Yang L, Shi Y, Li J, Fang L, Luan T. Transformation of aqueous sulfonamides under horseradish peroxidase and characterization of sulfur dioxide extrusion products from sulfadiazine. CHEMOSPHERE 2018; 200:164-172. [PMID: 29477765 DOI: 10.1016/j.chemosphere.2018.01.118] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/04/2017] [Revised: 01/08/2018] [Accepted: 01/23/2018] [Indexed: 05/08/2023]
Abstract
The potential of horseradish peroxidase (HRP) to catalyze the removal of sulfonamides from water and the effects of different H2O2 and HRP concentrations were investigated. Six sulfonamides, each with a five- or six-membered heterocyclic group, including sulfamethoxazole (SMX), sulfathiazole (STZ), sulfapyridine (SPD), sulfadiazine (SDZ), sulfamerazine (SMR) and sulfamethoxypyridazine (SMP) were selected as target compounds. All sulfonamides exhibit a pseudo-first-order dependence of the concentration versus the reaction time. The decay rate (k, h-1) of the six sulfonamides spiked individually exhibit a trend following the order of STZ > SMP, SPD > SMR > SDZ » SMX. When spiked together, the coexistent sulfonamides might act as mediators for the enhancement of SMX removal and as competitors for the decreased removal of most sulfonamides. Moreover, six transformation products of SDZ are identified by the Thermo Scientific LTQ Orbitrap Elite technique. SDZ transformation involves two steps: one is the Smiles re-arrangement of the structure, and the other is oxidation and sulfur dioxide extrusion. This study is the first to report the removal dynamics of sulfonamides in HRP-catalyzed reactions and the identified products of SDZ.
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Affiliation(s)
- Lihua Yang
- Guangdong Provincial Key Laboratory of Marine Resources and Coastal Engineering, School of Marine Sciences, Sun Yat-Sen University, No. 135, Xingang Xi Road, Guangzhou 510275, China
| | - Yang Shi
- Guangdong Provincial Key Laboratory of Marine Resources and Coastal Engineering, School of Marine Sciences, Sun Yat-Sen University, No. 135, Xingang Xi Road, Guangzhou 510275, China
| | - Jinjin Li
- South China Sea Bio-Resource Exploitation and Utilization Collaborative Innovation Center, School of Life Sciences, Sun Yat-Sen University, No. 135, Xingang Xi Road, Guangzhou 510275, China
| | - Ling Fang
- South China Sea Bio-Resource Exploitation and Utilization Collaborative Innovation Center, School of Life Sciences, Sun Yat-Sen University, No. 135, Xingang Xi Road, Guangzhou 510275, China
| | - Tiangang Luan
- Guangdong Provincial Key Laboratory of Marine Resources and Coastal Engineering, School of Marine Sciences, Sun Yat-Sen University, No. 135, Xingang Xi Road, Guangzhou 510275, China; South China Sea Bio-Resource Exploitation and Utilization Collaborative Innovation Center, School of Life Sciences, Sun Yat-Sen University, No. 135, Xingang Xi Road, Guangzhou 510275, China.
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23
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Hu J, Lu K, Dong S, Huang Q, Mao L. Inactivation of Laccase by the Attack of As (III) Reaction in Water. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2018; 52:2945-2952. [PMID: 29405708 DOI: 10.1021/acs.est.7b05650] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
Abstract
Laccase is a multicopper oxidase containing four coppers as reaction sites, including one type 1, one type 2, and two type 3. We here provide the first experimental data showing that As (III) can be effectively removed from water and transformed to As (V) through reactions mediated by laccase with the presence of oxygen. To this end, the As (III) removal, As (V) yields, total protein, active laccase, and copper concentrations in the aqueous phase were determined, respectively. Additionally, electron paramagnetic resonance spectra and UV-vis spectra were applied to probe possible structural changes of the laccase during the reaction. The data offer the first evidence that laccase can be inactivated by As (III) attack thus leading to the release of type 2 copper. The released copper has no reactivity with the As (III). These findings provide new ideas into a significant pathway likely to master the environmental transformation of arsenite, and advance the understanding of laccase inactivation mechanisms, thus providing a foundation for optimization of enzyme-based processes and potential development for removal and remediation of arsenite contamination in the environment.
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Affiliation(s)
- Jinyuan Hu
- State Key Laboratory of Pollution Control and Resource Reuse, School of the Environment , Nanjing University , Nanjing 210093 , P. R. China
| | - Kun Lu
- State Key Laboratory of Pollution Control and Resource Reuse, School of the Environment , Nanjing University , Nanjing 210093 , P. R. China
| | - Shipeng Dong
- State Key Laboratory of Pollution Control and Resource Reuse, School of the Environment , Nanjing University , Nanjing 210093 , P. R. China
| | - Qingguo Huang
- College of Agricultural and Environmental Sciences, Department of Crop and Soil Sciences , University of Georgia , Griffin , Georgia 30223 , United States
| | - Liang Mao
- State Key Laboratory of Pollution Control and Resource Reuse, School of the Environment , Nanjing University , Nanjing 210093 , P. R. China
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24
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Lu K, Hu J, Gao S, Mao L. Multi-walled carbon nanotubes facilitated the removal of tetrabromobisphenol a mediated by horseradish peroxidase. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2017; 231:863-870. [PMID: 28881310 DOI: 10.1016/j.envpol.2017.08.093] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/22/2017] [Revised: 08/15/2017] [Accepted: 08/28/2017] [Indexed: 06/07/2023]
Abstract
In this study, we systematically investigated the effect of multiwall carbon nanotubes (MWCNTs) on the removal of tetrabromobisphenol A (TBBPA) mediated by horseradish peroxidase (HRP) at varying important conditions. The results suggested that the presence of MWCNTs significantly enhanced the removal of TBBPA mediated by HRP and the reaction rate constant was linear with the MWCNTs dosage. The enhancement of MWCNTs on the HRP-mediated reaction was attributed to two facts, one is that MWCNTs protected HRP from inactivation, the other is that the presence of MWCNTs made the homogeneous reaction of TBBPA be heterogeneous reaction by adsorbing TBBPA on its surface. Moreover, the influence of MWCNTs on TBBPA products distribution was further elucidated. We found that the species of reaction product had no difference between the HRP-mediated systems with and without the presence of MWCNTs. However, the presence of MWCNTs significantly decreased the yields of each product. These results give insight into the role of MWCNTs in HRP-mediated TBBPA reactions and provide theoretical foundation for potential development of novel enzymatic methods to control TBBPA contamination. MWCNTs enhanced the removal of TBBPA mediated by HRP/H2O2, because it protected HRP from inactivation and adsorbed TBBPA on its surface to form a heterogeneous reaction process.
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Affiliation(s)
- Kun Lu
- State Key Laboratory of Pollution Control and Resource Reuse, School of the Environment, Nanjing University, Nanjing 210093, China
| | - Jinyuan Hu
- State Key Laboratory of Pollution Control and Resource Reuse, School of the Environment, Nanjing University, Nanjing 210093, China
| | - Shixiang Gao
- State Key Laboratory of Pollution Control and Resource Reuse, School of the Environment, Nanjing University, Nanjing 210093, China
| | - Liang Mao
- State Key Laboratory of Pollution Control and Resource Reuse, School of the Environment, Nanjing University, Nanjing 210093, China.
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25
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Singh S, Mishra R, Sharma RS, Mishra V. Phenol remediation by peroxidase from an invasive mesquite: Turning an environmental wound into wisdom. JOURNAL OF HAZARDOUS MATERIALS 2017; 334:201-211. [PMID: 28412630 DOI: 10.1016/j.jhazmat.2017.04.007] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/17/2017] [Revised: 04/01/2017] [Accepted: 04/03/2017] [Indexed: 06/07/2023]
Abstract
The present study examines mesquite (Prosopis juliflora), an invasive species, to yield peroxidase that may reduce hazards of phenolics to living organisms. As low as 0.3U of low-purity mesquite peroxidase (MPx) efficiently remove phenol and chlorophenols (90-92%) compared with Horseradish peroxidase (HRP) (40-60%). MPx shows a very high removal efficiency (40-50%) at a wide range of pH (2-9) and temperature (20-80°C), as opposed to HRP (15-20%). At a high-level of the substrate (2.4mM) and without the addition of PEG, MPx maintains a significant phenolic removal (60-≥92%) and residual activity (∼25%). It proves the superiority of MPx over HRP, which showed insignificant removal (10-12%) under similar conditions, and no residual activity even with PEG addition. The root elongation and plant growth bioassays confirm phenolic detoxification by MPx. Readily availability of mesquite across the countries and easy preparation of MPx from leaves make this tree as a sustainable source for a low-technological solution for phenol remediation. This study is the first step towards converting a biological wound of invasive species into wisdom and strength for protecting the environment from phenol pollution.
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Affiliation(s)
- Savita Singh
- Bioresources and Environmental Biotechnology, Laboratory, Department of Environmental Studies, University of Delhi, Delhi-110 007, India
| | - Ruchi Mishra
- Bioresources and Environmental Biotechnology, Laboratory, Department of Environmental Studies, University of Delhi, Delhi-110 007, India
| | - Radhey Shyam Sharma
- Bioresources and Environmental Biotechnology, Laboratory, Department of Environmental Studies, University of Delhi, Delhi-110 007, India
| | - Vandana Mishra
- Bioresources and Environmental Biotechnology, Laboratory, Department of Environmental Studies, University of Delhi, Delhi-110 007, India.
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26
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Arca-Ramos A, Eibes G, Feijoo G, Lema JM, Moreira MT. Enzymatic reactors for the removal of recalcitrant compounds in wastewater. BIOCATAL BIOTRANSFOR 2017. [DOI: 10.1080/10242422.2017.1315411] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
Affiliation(s)
- Adriana Arca-Ramos
- Department of Chemical Engineering, Institute of Technology, Universidade de Santiago de Compostela, Santiago de Compostela, Spain
| | - Gemma Eibes
- Department of Chemical Engineering, Institute of Technology, Universidade de Santiago de Compostela, Santiago de Compostela, Spain
| | - Gumersindo Feijoo
- Department of Chemical Engineering, Institute of Technology, Universidade de Santiago de Compostela, Santiago de Compostela, Spain
| | - Juan M. Lema
- Department of Chemical Engineering, Institute of Technology, Universidade de Santiago de Compostela, Santiago de Compostela, Spain
| | - María Teresa Moreira
- Department of Chemical Engineering, Institute of Technology, Universidade de Santiago de Compostela, Santiago de Compostela, Spain
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27
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Feng Y, Lu K, Gao S, Mao L. The fate and transformation of tetrabromobisphenol A in natural waters, mediated by oxidoreductase enzymes. ENVIRONMENTAL SCIENCE. PROCESSES & IMPACTS 2017; 19:596-604. [PMID: 28327772 DOI: 10.1039/c6em00703a] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
In this study, we examined the fate and transformation of tetrabromobisphenol A (TBBPA), mediated by the representative oxidoreductases (laccase and horseradish peroxidase (HRP)) in natural waters. Both enzymes could readily degrade TBBPA at environmentally relevant concentrations (e.g., 10 nmol L-1) in natural waters. After 2 hour treatment, 0.5-25% and 35-65% of TBBPA were degraded in municipal wastewater and natural surface waters by a laccase or HRP-catalyzed reaction, respectively. Enzyme kinetics evaluations indicated that the kCAT/KM ratio of HRP (1.01 μM-1 s-1) was much higher than that of laccase (0.032 μM-1 s-1) for TBBPA degradation, suggesting that the catalytic performance of HRP towards TBBPA was more efficient than that of laccase. The effects of pH and organic matter on the enzymatic degradation efficiency were explored. Organic matter in the water inhibited the enzymatic degradation efficiency and the degree of inhibition was proportional to the UV254 values of water. Product identification indicated that the product distribution of TBBPA at low concentration (10 nmol L-1) was similar to that of TBBPA at high concentration (10 μmol L-1). The degradation intermediates underwent further enzymatic reaction to yield higher molecular weight secondary products. Toxicity assessment showed that TBBPA toxicity was effectively eliminated by the oxidoreductase-catalyzed reaction.
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Affiliation(s)
- Yiping Feng
- State Key Laboratory of Pollution Control and Resource Reuse, School of the Environment, Nanjing University, Nanjing, Jiangsu 210023, P. R. China.
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28
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Cha HJ, Jang DS, Jin KS, Choi KY. Structural analyses combined with small-angle X-ray scattering reveals that the retention of heme is critical for maintaining the structure of horseradish peroxidase under denaturing conditions. Amino Acids 2017; 49:715-723. [PMID: 28144743 DOI: 10.1007/s00726-016-2372-3] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/02/2016] [Accepted: 11/23/2016] [Indexed: 11/29/2022]
Abstract
We analyzed the structure of horseradish peroxidase (HRP) under denaturing conditions of 9 M urea or 6 M guanidine hydrochloride (GdnHCl). Far-UV circular dichroism (CD) spectra indicated the existence of native-like secondary structure of holo-HRP in 9 M urea. In addition, slight changes in near-UV and Soret region CD spectra of holo-HRP in 9 M urea suggest that the tertiary structure of holo-HRP and the binding of heme remain partially intact in this condition. A transition in the thermal unfolding transition curve of holo-HRP in 9 M urea indicated the existence of a considerable amount of secondary structure. However, no secondary structure, tertiary structure, or interaction between heme and HRP were observed in holo-HRP in 6 M GdnHCl. Small-angle X-ray scattering indicated that although distal and proximal domains of holo-HRP in 9 M urea might be partially unfolded, the central region that contains the heme might maintain its tertiary structure. Our results suggest that retention of the heme is essential for maintenance of the structure of HRP under highly denaturing conditions.
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Affiliation(s)
- Hyung Jin Cha
- Pohang Accelerator Laboratory, Pohang University of Science and Technology (POSTECH), Pohang, Korea
| | - Do Soo Jang
- Department of Life Sciences, POSTECH, Pohang, Korea.,Huons Co., Ltd., Seongnam, Korea
| | - Kyeong Sik Jin
- Pohang Accelerator Laboratory, Pohang University of Science and Technology (POSTECH), Pohang, Korea.
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Green AP, Hayashi T, Mittl PRE, Hilvert D. A Chemically Programmed Proximal Ligand Enhances the Catalytic Properties of a Heme Enzyme. J Am Chem Soc 2016; 138:11344-52. [DOI: 10.1021/jacs.6b07029] [Citation(s) in RCA: 50] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Anthony P. Green
- School of Chemistry & Manchester Institute of Biotechnology, The University of Manchester, 131 Princess Street, Manchester M1 7DN, U.K
| | - Takahiro Hayashi
- Laboratory
of Organic Chemistry, ETH Zurich, 8093 Zürich, Switzerland
| | - Peer R. E. Mittl
- Department
of Biochemistry, University of Zürich, 8057 Zürich, Switzerland
| | - Donald Hilvert
- Laboratory
of Organic Chemistry, ETH Zurich, 8093 Zürich, Switzerland
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30
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Shan J, Ji R, Yu Y, Xie Z, Yan X. Biochar, activated carbon, and carbon nanotubes have different effects on fate of (14)C-catechol and microbial community in soil. Sci Rep 2015; 5:16000. [PMID: 26515132 PMCID: PMC4626844 DOI: 10.1038/srep16000] [Citation(s) in RCA: 35] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/27/2015] [Accepted: 10/07/2015] [Indexed: 12/02/2022] Open
Abstract
This study investigated the effects of biochar, activated carbon (AC)-, and single-walled and multi-walled carbon nanotubes (SWCNTs and MWCNTs) in various concentrations (0, 0.2, 20, and 2,000 mg/kg dry soil) on the fate of 14C-catechol and microbial community in soil. The results showed that biochar had no effect on the mineralization of 14C-catechol, whereas AC at all amendment rates and SWCNTs at 2,000 mg/kg significantly reduced mineralization. Particularly, MWCNTs at 0.2 mg/kg significantly stimulated mineralization compared with the control soil. The inhibitory effects of AC and SWCNTs on the mineralization were attributed to the inhibited soil microbial activities and the shifts in microbial communities, as suggested by the reduced microbial biomass C and the separated phylogenetic distance. In contrast, the stimulatory effects of MWCNTs on the mineralization were attributed to the selective stimulation of specific catechol-degraders by MWCNTs at 0.2 mg/kg. Only MWCNTs amendments and AC at 2,000 mg/kg significantly changed the distribution of 14C residues within the fractions of humic substances. Our findings suggest biochar, AC, SWCNTs and MWCNTs have different effects on the fate of 14C-catechol and microbial community in soil.
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Affiliation(s)
- Jun Shan
- State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, China.,Changshu Agro-ecological Experimental Station, Chinese Academy of Sciences, Changshu 215555, China
| | - Rong Ji
- State Key Laboratory of Pollution Control and Resource Reuse, School of the Environment, Nanjing University, 163 Xianlin Avenue, Nanjing 210023, China
| | - Yongjie Yu
- College of Applied Meteorology, Nanjing University of Information Science and Technology, Nanjing 210044, China
| | - Zubin Xie
- State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, China
| | - Xiaoyuan Yan
- State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, China.,Changshu Agro-ecological Experimental Station, Chinese Academy of Sciences, Changshu 215555, China
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Abstract
Graphene has attracted the attention of the entire scientific community due to its unique mechanical and electrochemical, electronic, biomaterial, and chemical properties. The water-soluble derivative of graphene, graphene oxide, is highly prized and continues to be intensely investigated by scientists around the world. This review seeks to provide an overview of the currents applications of graphene oxide in nanomedicine, focusing on delivery systems, tissue engineering, cancer therapies, imaging, and cytotoxicity, together with a short discussion on the difficulties and the trends for future research regarding this amazing material.
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Affiliation(s)
- Si-Ying Wu
- Department of Bionanotechnology, Gachon Medical Research Institute, Gachon University, Sungnamsi, Republic of Korea
| | - Seong Soo A An
- Department of Bionanotechnology, Gachon Medical Research Institute, Gachon University, Sungnamsi, Republic of Korea
| | - John Hulme
- Department of Bionanotechnology, Gachon Medical Research Institute, Gachon University, Sungnamsi, Republic of Korea
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32
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Antioxidant Capacity of Poly(Ethylene Glycol) (PEG) as Protection Mechanism Against Hydrogen Peroxide Inactivation of Peroxidases. Appl Biochem Biotechnol 2015; 177:1364-73. [DOI: 10.1007/s12010-015-1820-y] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/02/2015] [Accepted: 08/17/2015] [Indexed: 10/23/2022]
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O’Shea TM, Webber MJ, Aimetti AA, Langer R. Covalent Incorporation of Trehalose within Hydrogels for Enhanced Long-Term Functional Stability and Controlled Release of Biomacromolecules. Adv Healthc Mater 2015; 4:1802-12. [PMID: 26088467 PMCID: PMC4825875 DOI: 10.1002/adhm.201500334] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/04/2015] [Revised: 05/20/2015] [Indexed: 11/06/2022]
Abstract
Hydrogels with covalently incorporated trehalose are synthesized using thiol-ene Michael addition. Trehalose hydrogels afford prolonged stabilization and -controlled release of model enzymes in vitro and in vivo as well as preservation of protein stability under heat and -lyophilization stressors. Strong and -ordered hydrogen bonding interactions within covalently incorporated trehalose hydrogels represent a possible mechanism for protein stabilization.
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Affiliation(s)
- Timothy M. O’Shea
- Harvard–Massachusetts Institute of Technology Division of Health Sciences and Technology, Institute for Medical Engineering and Science, Massachusetts Institute of Technology, Cambridge, MA 02139, USA
- David H. Koch Institute for Integrative Cancer Research, Massachusetts Institute of Technology, Cambridge, MA 02139, USA
| | - Matthew J. Webber
- David H. Koch Institute for Integrative Cancer Research, Massachusetts Institute of Technology, Cambridge, MA 02139, USA
- Department of Anesthesiology, Children’s Hospital Boston, 300 Longwood Avenue, Boston, MA 02115, USA
| | - Alex A. Aimetti
- InVivo Therapeutics Corporation, One Kendall Square Building 1400 East, Floor 4, Cambridge, MA 02139, USA
| | - Robert Langer
- Harvard–Massachusetts Institute of Technology Division of Health Sciences and Technology, Institute for Medical Engineering and Science, Massachusetts Institute of Technology, Cambridge, MA 02139, USA
- David H. Koch Institute for Integrative Cancer Research, Massachusetts Institute of Technology, Cambridge, MA 02139, USA
- Department of Chemical Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139, USA
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Lu K, Huang Q, Wang P, Mao L. Physicochemical Changes of Few-Layer Graphene in Peroxidase-Catalyzed Reactions: Characterization and Potential Ecological Effects. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2015; 49:8558-8565. [PMID: 26086574 DOI: 10.1021/acs.est.5b02261] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
Abstract
The environmental implications of graphene have received much attention, however, little is known about how graphene affects or may be affected by the enzymatic reactions that are critically involved in natural organic matter transformation processes. We conducted experiments to examine the role of few-layer graphene (FLG) in the reaction system of tetrabromobisphenol A (TBBPA) mediated by horseradish peroxidase (HRP). We found that TBBPA was transformed by HRP into two products that were likely formed from coupling of two TBBPA radicals via interaction of an oxygen atom on one radical and a propyl-substituted aromatic carbon atom on the other. Presence of FLG greatly increased the reaction rate by protecting HRP from inactivation. Direct reactions between TBBPA radicals and FLG were unequivocally evidenced using (14)C labeling and the characteristic photoelectron response of bromine contained in TBBPA. The thickness, size, and aggregation profile of FLG was modified by the reaction as shown by multiple characterization tools. Assessment using Daphnia magna revealed a substantial decrease in the bioaccumulation and toxicity of the FLG after being modified. The data provides the first evidence that FLG can be modified in HRP-mediated reactions and indicates that such modifications may have strong implications in its ecological effects.
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Affiliation(s)
- Kun Lu
- †State Key Laboratory of Pollution Control and Resource Reuse, School of the Environment, Nanjing University, Nanjing 210093, P. R. China
| | - Qingguo Huang
- ‡College of Agricultural and Environmental Sciences, Department of Crop and Soil Sciences, University of Georgia, Griffin, Georgia 30223, United States
| | - Peng Wang
- §College of Engineering and Applied Sciences, Nanjing University, Nanjing 210093, P. R. China
| | - Liang Mao
- †State Key Laboratory of Pollution Control and Resource Reuse, School of the Environment, Nanjing University, Nanjing 210093, P. R. China
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Kurnik K, Treder K, Skorupa-Kłaput M, Tretyn A, Tyburski J. Removal of Phenol from Synthetic and Industrial Wastewater by Potato Pulp Peroxidases. WATER, AIR, AND SOIL POLLUTION 2015; 226:254. [PMID: 26190873 PMCID: PMC4499105 DOI: 10.1007/s11270-015-2517-0] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/24/2015] [Accepted: 06/23/2015] [Indexed: 05/15/2023]
Abstract
Plant peroxidases have strong potential utility for decontamination of phenol-polluted wastewater. However, large-scale use of these enzymes for phenol depollution requires a source of cheap, abundant, and easily accessible peroxidase-containing material. In this study, we show that potato pulp, a waste product of the starch industry, contains large amounts of active peroxidases. We demonstrate that potato pulp may serve as a tool for peroxidase-based remediation of phenol pollution. The phenol removal efficiency of potato pulp was over 95 % for optimized phenol concentrations. The potato pulp enzymes maintained their activity at pH 4 to 8 and were stable over a wide temperature range. Phenol solutions treated with potato pulp showed a significant reduction in toxicity compared with untreated phenol solutions. Finally we determined that this method may be employed to remove phenol from industrial effluent with over 90 % removal efficiency under optimal conditions.
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Affiliation(s)
- Katarzyna Kurnik
- />Chair of Plant Physiology and Biotechnology, Nicolaus Copernicus University, Lwowska 1, 87-100 Toruń, Poland
| | - Krzysztof Treder
- />Laboratory of Molecular Diagnostic and Biochemistry, Department of Potato Protection and Seed Science in Bonin, Plant Breeding and Acclimatization Institute-National Research Institute, 76-009 Bonin, Poland
| | - Monika Skorupa-Kłaput
- />Chair of Plant Physiology and Biotechnology, Nicolaus Copernicus University, Lwowska 1, 87-100 Toruń, Poland
| | - Andrzej Tretyn
- />Chair of Plant Physiology and Biotechnology, Nicolaus Copernicus University, Lwowska 1, 87-100 Toruń, Poland
- />Centre for Modern Interdisciplinary Technologies, Nicolaus Copernicus University, Wileńska 4, 87-100 Toruń, Poland
| | - Jarosław Tyburski
- />Chair of Plant Physiology and Biotechnology, Nicolaus Copernicus University, Lwowska 1, 87-100 Toruń, Poland
- />Centre for Modern Interdisciplinary Technologies, Nicolaus Copernicus University, Wileńska 4, 87-100 Toruń, Poland
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Pradal C, Grøndahl L, Cooper-White JJ. Hydrolytically Degradable Polyrotaxane Hydrogels for Drug and Cell Delivery Applications. Biomacromolecules 2014; 16:389-403. [DOI: 10.1021/bm501615p] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
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Gonzalez-Perez D, Garcia-Ruiz E, Ruiz-Dueñas FJ, Martinez AT, Alcalde M. Structural Determinants of Oxidative Stabilization in an Evolved Versatile Peroxidase. ACS Catal 2014. [DOI: 10.1021/cs501218v] [Citation(s) in RCA: 30] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- David Gonzalez-Perez
- Department of Biocatalysis, Institute of Catalysis, CSIC, Marie Curie 2, Cantoblanco, 28049 Madrid, Spain
| | - Eva Garcia-Ruiz
- Department of Chemical and Biomolecular Engineering, University of Illinois at Urbana−Champaign, 600 South Mathews Avenue, Urbana, Illinois 61801, United States
| | | | - Angel T. Martinez
- Biological Research Centre, CSIC, Ramiro de Maeztu 9, 28040 Madrid, Spain
| | - Miguel Alcalde
- Department of Biocatalysis, Institute of Catalysis, CSIC, Marie Curie 2, Cantoblanco, 28049 Madrid, Spain
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