1
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Thoradit T, Thongyoo K, Kamoltheptawin K, Tunprasert L, El-Esawi MA, Aguida B, Jourdan N, Buddhachat K, Pooam M. Cryptochrome and quantum biology: unraveling the mysteries of plant magnetoreception. FRONTIERS IN PLANT SCIENCE 2023; 14:1266357. [PMID: 37860259 PMCID: PMC10583551 DOI: 10.3389/fpls.2023.1266357] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/24/2023] [Accepted: 09/14/2023] [Indexed: 10/21/2023]
Abstract
Magnetoreception, the remarkable ability of organisms to perceive and respond to Earth's magnetic field, has captivated scientists for decades, particularly within the field of quantum biology. In the plant science, the exploration of the complicated interplay between quantum phenomena and classical biology in the context of plant magnetoreception has emerged as an attractive area of research. This comprehensive review investigates into three prominent theoretical models: the Radical Pair Mechanism (RPM), the Level Crossing Mechanism (LCM), and the Magnetite-based MagR theory in plants. While examining the advantages, limitations, and challenges associated with each model, this review places a particular weight on the RPM, highlighting its well-established role of cryptochromes and in-vivo experiments on light-independent plant magnetoreception. However, alternative mechanisms such as the LCM and the MagR theory are objectively presented as convincing perspectives that permit further investigation. To shed light on these theoretical frameworks, this review proposes experimental approaches including cutting-edge experimental techniques. By integrating these approaches, a comprehensive understanding of the complex mechanisms driving plant magnetoreception can be achieved, lending support to the fundamental principle in the RPM. In conclusion, this review provides a panoramic overview of plant magnetoreception, highlighting the exciting potential of quantum biology in unraveling the mysteries of magnetoreception. As researchers embark on this captivating scientific journey, the doors to deciphering the diverse mechanisms of magnetoreception in plants stand wide open, offering a profound exploration of nature's adaptations to environmental cues.
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Affiliation(s)
- Thawatchai Thoradit
- Department of Biology, Faculty of Science, Naresuan University, Phitsanulok, Thailand
| | - Kanjana Thongyoo
- Department of Biology, Faculty of Science, Naresuan University, Phitsanulok, Thailand
| | | | - Lalin Tunprasert
- Department of Biology, Faculty of Science, Naresuan University, Phitsanulok, Thailand
- State Key Laboratory for Mechanical Behavior of Materials, School of Material Science and Engineering, Xi’an Jiaotong University, Xi’an, China
| | | | - Blanche Aguida
- UMR CNRS 8256 Adaptation biologique et vieillissement (B2A), Institute of Biology Paris Seine, Sorbonne Université, Paris, France
| | - Nathalie Jourdan
- UMR CNRS 8256 Adaptation biologique et vieillissement (B2A), Institute of Biology Paris Seine, Sorbonne Université, Paris, France
| | - Kittisak Buddhachat
- Department of Biology, Faculty of Science, Naresuan University, Phitsanulok, Thailand
| | - Marootpong Pooam
- Department of Biology, Faculty of Science, Naresuan University, Phitsanulok, Thailand
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2
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Bassetto M, Reichl T, Kobylkov D, Kattnig DR, Winklhofer M, Hore PJ, Mouritsen H. No evidence for magnetic field effects on the behaviour of Drosophila. Nature 2023; 620:595-599. [PMID: 37558871 PMCID: PMC10432270 DOI: 10.1038/s41586-023-06397-7] [Citation(s) in RCA: 7] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/14/2023] [Accepted: 07/03/2023] [Indexed: 08/11/2023]
Abstract
Migratory songbirds have the remarkable ability to extract directional information from the Earth's magnetic field1,2. The exact mechanism of this light-dependent magnetic compass sense, however, is not fully understood. The most promising hypothesis focuses on the quantum spin dynamics of transient radical pairs formed in cryptochrome proteins in the retina3-5. Frustratingly, much of the supporting evidence for this theory is circumstantial, largely because of the extreme challenges posed by genetic modification of wild birds. Drosophila has therefore been recruited as a model organism, and several influential reports of cryptochrome-mediated magnetic field effects on fly behaviour have been widely interpreted as support for a radical pair-based mechanism in birds6-23. Here we report the results of an extensive study testing magnetic field effects on 97,658 flies moving in a two-arm maze and on 10,960 flies performing the spontaneous escape behaviour known as negative geotaxis. Under meticulously controlled conditions and with vast sample sizes, we have been unable to find evidence for magnetically sensitive behaviour in Drosophila. Moreover, after reassessment of the statistical approaches and sample sizes used in the studies that we tried to replicate, we suggest that many-if not all-of the original results were false positives. Our findings therefore cast considerable doubt on the existence of magnetic sensing in Drosophila and thus strongly suggest that night-migratory songbirds remain the organism of choice for elucidating the mechanism of light-dependent magnetoreception.
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Affiliation(s)
- Marco Bassetto
- Physical & Theoretical Chemistry Laboratory, Department of Chemistry, University of Oxford, Oxford, UK
- AG Neurosensory Sciences/Animal Navigation, Institut für Biologie und Umweltwissenschaften, Carl-von-Ossietzky Universität Oldenburg, Oldenburg, Germany
| | - Thomas Reichl
- AG Neurosensory Sciences/Animal Navigation, Institut für Biologie und Umweltwissenschaften, Carl-von-Ossietzky Universität Oldenburg, Oldenburg, Germany
| | - Dmitry Kobylkov
- AG Neurosensory Sciences/Animal Navigation, Institut für Biologie und Umweltwissenschaften, Carl-von-Ossietzky Universität Oldenburg, Oldenburg, Germany
- Center for Mind/Brain Science, University of Trento, Rovereto, Italy
| | - Daniel R Kattnig
- Living Systems Institute, University of Exeter, Exeter, UK
- Department of Physics, University of Exeter, Exeter, UK
| | - Michael Winklhofer
- AG Sensory Biology of Animals, Institut für Biologie und Umweltwissenschaften, Carl-von-Ossietzky Universität Oldenburg, Oldenburg, Germany
- Research Center for Neurosensory Sciences, University of Oldenburg, Oldenburg, Germany
| | - P J Hore
- Physical & Theoretical Chemistry Laboratory, Department of Chemistry, University of Oxford, Oxford, UK.
| | - Henrik Mouritsen
- AG Neurosensory Sciences/Animal Navigation, Institut für Biologie und Umweltwissenschaften, Carl-von-Ossietzky Universität Oldenburg, Oldenburg, Germany.
- Research Center for Neurosensory Sciences, University of Oldenburg, Oldenburg, Germany.
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3
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Krylov VV, Osipova EA. Molecular Biological Effects of Weak Low-Frequency Magnetic Fields: Frequency-Amplitude Efficiency Windows and Possible Mechanisms. Int J Mol Sci 2023; 24:10989. [PMID: 37446167 DOI: 10.3390/ijms241310989] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/24/2023] [Revised: 06/26/2023] [Accepted: 06/29/2023] [Indexed: 07/15/2023] Open
Abstract
This review covers the phenomenon of resonance-like responses of biological systems to low-frequency magnetic fields (LFMF). The historical development of this branch of magnetobiology, including the most notable biophysical models that explain the resonance-like responses of biological systems to LFMF with a specific frequency and amplitude, is given. Two groups can be distinguished among these models: one considers ion-cofactors of proteins as the primary targets for the LFMF influence, and the other regards the magnetic moments of particles in biomolecules. Attention is paid to the dependence of resonance-like LFMF effects on the cell type. A radical-pair mechanism of the magnetic field's influence on biochemical processes is described with the example of cryptochrome. Conditions for this mechanism's applicability to explain the biological effects of LFMF are given. A model of the influence of LFMF on radical pairs in biochemical oscillators, which can explain the frequency-amplitude efficiency windows of LFMF, is proposed.
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Affiliation(s)
- Viacheslav V Krylov
- Papanin Institute for Biology of Inland Waters, Russian Academy of Sciences, Borok 152742, Russia
| | - Elena A Osipova
- Papanin Institute for Biology of Inland Waters, Russian Academy of Sciences, Borok 152742, Russia
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4
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Pažėra G, Benjamin P, Mouritsen H, Hore PJ. Isotope Substitution Effects on the Magnetic Compass Properties of Cryptochrome-Based Radical Pairs: A Computational Study. J Phys Chem B 2023; 127:838-845. [PMID: 36669149 PMCID: PMC9900586 DOI: 10.1021/acs.jpcb.2c05335] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]
Abstract
The biophysical mechanism of the magnetic compass sense of migratory songbirds is thought to rely on the photochemical reactions of flavin-containing radical pairs in cryptochrome proteins located in the birds' eyes. A consequence of this hypothesis is that the effect of the Earth's magnetic field on the quantum yields of reaction products should be sensitive to isotopic substitutions that modify the hyperfine interactions in the radicals. In this report, we use spin dynamics simulations to explore the effects of 1H → 2H, 12C → 13C, and 14N → 15N isotopic substitutions on the functioning of cryptochrome 4a as a magnetic direction sensor. Two main conclusions emerge. (1) Uniform deuteration of the flavin chromophore appears to be the best way to boost the anisotropy of the magnetic field effect and to change its symmetry. (2) 13C substitution of three of the 12 flavin carbons, in particular C4, C4a, and C8α, seems to be the best recipe for attenuating the anisotropy. These predictions should give insight into the factors that control the magnetic sensitivity once spectroscopic techniques are available for measuring magnetic field effects on oriented protein samples.
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Affiliation(s)
| | - Philip Benjamin
- Department
of Chemistry, University of Oxford, Oxford OX1 3QZ, U.K.
| | - Henrik Mouritsen
- Institut
für Biologie und Umweltwissenschaften, Carl-von-Ossietzky Universität Oldenburg, Oldenburg 26111, Germany,Research
Centre for Neurosensory Science, University
of Oldenburg, Oldenburg 26111, Germany
| | - P. J. Hore
- Department
of Chemistry, University of Oxford, Oxford OX1 3QZ, U.K.,
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5
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Wong SY, Benjamin P, Hore PJ. Magnetic field effects on radical pair reactions: estimation of B1/2 for flavin-tryptophan radical pairs in cryptochromes. Phys Chem Chem Phys 2023; 25:975-982. [PMID: 36519379 PMCID: PMC9811481 DOI: 10.1039/d2cp03793a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Abstract
Magnetic field effects on the yields of radical pair reactions are often characterised by the "half-field" parameter, B1/2, which encodes useful information on spin relaxation, radical recombination kinetics and electron-electron couplings as well as electron-nuclear hyperfine interactions. Here we use a variety of spin dynamics simulation methods to estimate the hyperfine-only values of B1/2 for the flavin-tryptophan radical pair, [FAD˙- TrpH˙+], thought to be the detector in the magnetic compass sense of migratory songbirds. The main findings are: (a) in the absence of fast recombination and spin relaxation, [FAD˙- TrpH˙+] radical pairs in solution and in the putative magnetoreceptor protein, cryptochrome, have B1/2 ≈ 1.89 mT and 2.46 mT, respectively. (b) The widely used expression for B1/2 due to Weller et al. (Chem. Phys. Lett, 1983, 96, 24-27) is only applicable to small, short-lived (∼5 ns), rapidly tumbling radical pairs in solution, and is quantitatively unreliable in the context of magnetoreception. (c) In the absence of molecular tumbling, the low-field effect for [FAD˙- TrpH˙+] is predicted to be abolished by the anisotropic components of the hyperfine interactions. Armed with the 2.46 mT "base value" for cryptochrome, measurements of B1/2 can be used to understand the impact of spin relaxation on its performance as a magnetic compass sensor.
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Affiliation(s)
- Siu Ying Wong
- Institut für Physik, Carl-von-Ossietzky Universität OldenburgOldenburg 26111Germany
| | - Philip Benjamin
- Department of Chemistry, University of OxfordOxfordOX1 3QZUK
| | - P. J. Hore
- Department of Chemistry, University of OxfordOxfordOX1 3QZUK
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6
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Pophof B, Henschenmacher B, Kattnig DR, Kuhne J, Vian A, Ziegelberger G. Biological Effects of Electric, Magnetic, and Electromagnetic Fields from 0 to 100 MHz on Fauna and Flora: Workshop Report. HEALTH PHYSICS 2023; 124:39-52. [PMID: 36480584 PMCID: PMC9722389 DOI: 10.1097/hp.0000000000001624] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Indexed: 06/17/2023]
Abstract
This report summarizes effects of anthropogenic electric, magnetic, and electromagnetic fields in the frequency range from 0 to 100 MHz on flora and fauna, as presented at an international workshop held on 5-7 November in 2019 in Munich, Germany. Such fields may originate from overhead powerlines, earth or sea cables, and from wireless charging systems. Animals and plants react differentially to anthropogenic fields; the mechanisms underlying these responses are still researched actively. Radical pairs and magnetite are discussed mechanisms of magnetoreception in insects, birds, and mammals. Moreover, several insects as well as marine species possess specialized electroreceptors, and behavioral reactions to anthropogenic fields have been reported. Plants react to experimental modifications of their magnetic environment by growth changes. Strong adverse effects of anthropogenic fields have not been described, but knowledge gaps were identified; further studies, aiming at the identification of the interaction mechanisms and the ecological consequences, are recommended.
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Affiliation(s)
- Blanka Pophof
- Competence Centre for Electromagnetic Fields, Department of Effects and Risks of Ionizing and Non-Ionizing Radiation, Federal Office for Radiation Protection, 85764 Oberschleißheim, Germany
| | - Bernd Henschenmacher
- Competence Centre for Electromagnetic Fields, Department of Effects and Risks of Ionizing and Non-Ionizing Radiation, Federal Office for Radiation Protection, 85764 Oberschleißheim, Germany
| | - Daniel R. Kattnig
- Department of Physics and Living Systems Institute, University of Exeter, Stocker Road, Exeter, EX4 4QD, United Kingdom
| | - Jens Kuhne
- Competence Centre for Electromagnetic Fields, Department of Effects and Risks of Ionizing and Non-Ionizing Radiation, Federal Office for Radiation Protection, 85764 Oberschleißheim, Germany
| | - Alain Vian
- Univ Angers, Institut Agro, INRAE, IRHS, SFR QUASAV, F-49000 Angers, France
| | - Gunde Ziegelberger
- Competence Centre for Electromagnetic Fields, Department of Effects and Risks of Ionizing and Non-Ionizing Radiation, Federal Office for Radiation Protection, 85764 Oberschleißheim, Germany
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7
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Grüning G, Wong SY, Gerhards L, Schuhmann F, Kattnig DR, Hore PJ, Solov’yov IA. Effects of Dynamical Degrees of Freedom on Magnetic Compass Sensitivity: A Comparison of Plant and Avian Cryptochromes. J Am Chem Soc 2022; 144:22902-22914. [DOI: 10.1021/jacs.2c06233] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/04/2022]
Affiliation(s)
- Gesa Grüning
- Department of Physics, Carl von Ossietzky University, Carl-von-Ossietzky-Street 9-11, 26129 Oldenburg, Germany
| | - Siu Ying Wong
- Department of Physics, Carl von Ossietzky University, Carl-von-Ossietzky-Street 9-11, 26129 Oldenburg, Germany
| | - Luca Gerhards
- Department of Physics, Carl von Ossietzky University, Carl-von-Ossietzky-Street 9-11, 26129 Oldenburg, Germany
| | - Fabian Schuhmann
- Department of Physics, Carl von Ossietzky University, Carl-von-Ossietzky-Street 9-11, 26129 Oldenburg, Germany
| | - Daniel R. Kattnig
- Department of Physics and Living Systems Institute, University of Exeter, Stocker Road, Exeter EX4 4QD, U.K
| | - P. J. Hore
- Department of Chemistry, Physical and Theoretical Chemistry Laboratory, University of Oxford, Oxford OX1 3QZ, U.K
| | - Ilia A. Solov’yov
- Department of Physics, Carl von Ossietzky University, Carl-von-Ossietzky-Street 9-11, 26129 Oldenburg, Germany
- Research Center for Neurosensory Science, Carl von Ossietzky Universität Oldenburg, 26111 Oldenburg, Germany
- Center for Nanoscale Dynamics (CENAD), Carl von Ossietzky Universität Oldenburg, Institut für Physik, Ammerländer Heerstreet 114-118, 26129 Oldenburg, Germany
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8
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Zadeh-Haghighi H, Simon C. Magnetic field effects in biology from the perspective of the radical pair mechanism. J R Soc Interface 2022; 19:20220325. [PMID: 35919980 PMCID: PMC9346374 DOI: 10.1098/rsif.2022.0325] [Citation(s) in RCA: 29] [Impact Index Per Article: 14.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2022] [Accepted: 07/14/2022] [Indexed: 04/07/2023] Open
Abstract
Hundreds of studies have found that weak magnetic fields can significantly influence various biological systems. However, the underlying mechanisms behind these phenomena remain elusive. Remarkably, the magnetic energies implicated in these effects are much smaller than thermal energies. Here, we review these observations, and we suggest an explanation based on the radical pair mechanism, which involves the quantum dynamics of the electron and nuclear spins of transient radical molecules. While the radical pair mechanism has been studied in detail in the context of avian magnetoreception, the studies reviewed here show that magnetosensitivity is widespread throughout biology. We review magnetic field effects on various physiological functions, discussing static, hypomagnetic and oscillating magnetic fields, as well as isotope effects. We then review the radical pair mechanism as a potential unifying model for the described magnetic field effects, and we discuss plausible candidate molecules for the radical pairs. We review recent studies proposing that the radical pair mechanism provides explanations for isotope effects in xenon anaesthesia and lithium treatment of hyperactivity, magnetic field effects on the circadian clock, and hypomagnetic field effects on neurogenesis and microtubule assembly. We conclude by discussing future lines of investigation in this exciting new area of quantum biology.
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Affiliation(s)
- Hadi Zadeh-Haghighi
- Department of Physics and Astronomy, University of Calgary, Calgary, Alberta, Canada T2N 1N4
- Institute for Quantum Science and Technology, University of Calgary, Calgary, Alberta, Canada T2N 1N4
- Hotchkiss Brain Institute, University of Calgary, Calgary, Alberta, Canada T2N 1N4
| | - Christoph Simon
- Department of Physics and Astronomy, University of Calgary, Calgary, Alberta, Canada T2N 1N4
- Institute for Quantum Science and Technology, University of Calgary, Calgary, Alberta, Canada T2N 1N4
- Hotchkiss Brain Institute, University of Calgary, Calgary, Alberta, Canada T2N 1N4
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9
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Tang LS, Fan ZX, Tian XF, He SM, Ji C, Chen AQ, Ren DL. The influences and regulatory mechanisms of magnetic fields on circadian rhythms. Chronobiol Int 2022; 39:1307-1319. [PMID: 35880245 DOI: 10.1080/07420528.2022.2105231] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
Abstract
A variety of devices used in daily life and biomedical field will generate magnetic fields with different parameters, raising concern about their influences on people's physiological functions. Multiple experimental works have been devoted to the influences of magnetic fields on circadian rhythms, yet the findings were not always consistent due to the differences in magnetic field parameters and experimental organisms. Also, clear regulatory mechanisms have not been found. By systematizing the major achievements in research on magnetic and circadian rhythms based on magnetic flux density and analyzing the potential mechanisms of the magnetic fields affecting circadian rhythms, this review sheds light on the effects of magnetic fields on circadian rhythms and the potential applications in biomedicine.
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Affiliation(s)
- Long-Sheng Tang
- Anhui Province Key Laboratory of Local Livestock and Poultry Genetic Resource Conservation and Bio-breeding, College of Animal Science and Technology, Anhui Agricultural University, Hefei, China.,School of Statistics and Applied Mathematics, Anhui University of Finance & Economics, Bengbu, China
| | - Zi-Xuan Fan
- Anhui Province Key Laboratory of Local Livestock and Poultry Genetic Resource Conservation and Bio-breeding, College of Animal Science and Technology, Anhui Agricultural University, Hefei, China
| | - Xiao-Fei Tian
- Institutes of Physical Science and Information Technology, Anhui University, Hefei, China
| | - Shi-Min He
- Anhui Province Key Laboratory of Local Livestock and Poultry Genetic Resource Conservation and Bio-breeding, College of Animal Science and Technology, Anhui Agricultural University, Hefei, China
| | - Cheng Ji
- School of Biology & Basic Medical Sciences, Suzhou Medical College of Soochow University, Soochow University, Suzhou, China
| | - An-Qi Chen
- Anhui Province Key Laboratory of Local Livestock and Poultry Genetic Resource Conservation and Bio-breeding, College of Animal Science and Technology, Anhui Agricultural University, Hefei, China
| | - Da-Long Ren
- Anhui Province Key Laboratory of Local Livestock and Poultry Genetic Resource Conservation and Bio-breeding, College of Animal Science and Technology, Anhui Agricultural University, Hefei, China
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10
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Abstract
The potential therapeutic uses of electromagnetic fields (EMF), part of the nonionizing radiation spectrum, increase with time. Among them, those considering the potential antitumor effects exerted by the Magnetic Fields (MFs), part of the EMF entity, have gained more and more interest. A recent review on this subject reports the MFs' effect on apoptosis of tumor cells as one of the most important breakthroughs. Apoptosis is considered a key mechanism regulating the genetic stability of cells and as such is considered of fundamental importance in cancer initiation and development. According to an atomic/sub-atomic analysis, based on quantum physics, of the complexity of biological life and the role played by oxygen and its radicals in cancer biology, a possible biophysical mechanism is described. The mechanism considers the influence of MFs on apoptosis through an effect on electron spin that is able to increase reactive oxygen species (ROS) concentration. Impacting on the delicate balance between ROS production and ROS elimination in tumor cells is considered a promising cancer therapy, affecting different biological processes, such as apoptosis and metastasis. An analysis in the literature, which allows correlation between MFs exposure characteristics and their influence on apoptosis and ROS concentration, supports the validity of the mechanism.
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Affiliation(s)
- Santi Tofani
- Department of Medical Physics, Ivrea Hospital - ASL Torino Nord-Ovest TO4, Ivrea Torino, Italy.,Department of Public Health Science, School of Medicine, University of Turin, Ivrea Torino, Italy
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11
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Arai S, Shimizu R, Adachi M, Hirai M. Magnetic field effects on the structure and molecular behavior of pigeon iron–sulfur protein. Protein Sci 2022; 31:e4313. [DOI: 10.1002/pro.4313] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2021] [Revised: 03/31/2022] [Accepted: 04/02/2022] [Indexed: 11/10/2022]
Affiliation(s)
- Shigeki Arai
- Institute for Quantum Life Science National Institutes for Quantum Science and Technology Tokai Ibaraki Japan
| | - Rumi Shimizu
- Institute for Quantum Life Science National Institutes for Quantum Science and Technology Tokai Ibaraki Japan
| | - Motoyasu Adachi
- Institute for Quantum Life Science National Institutes for Quantum Science and Technology Tokai Ibaraki Japan
| | - Mitsuhiro Hirai
- Graduate School of Science and Technology Gunma University Maebashi Gunma Japan
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12
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Zadeh-Haghighi H, Simon C. Radical pairs can explain magnetic field and lithium effects on the circadian clock. Sci Rep 2022; 12:269. [PMID: 34997158 PMCID: PMC8742017 DOI: 10.1038/s41598-021-04334-0] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/23/2021] [Accepted: 12/14/2021] [Indexed: 12/21/2022] Open
Abstract
Drosophila's circadian clock can be perturbed by magnetic fields, as well as by lithium administration. Cryptochromes are critical for the circadian clock. Further, the radical pairs in cryptochrome also can explain magnetoreception in animals. Based on a simple radical pair mechanism model of the animal magnetic compass, we show that both magnetic fields and lithium can influence the spin dynamics of the naturally occurring radical pairs and hence modulate the circadian clock's rhythms. Using a simple chemical oscillator model for the circadian clock, we show that the spin dynamics influence a rate in the chemical oscillator model, which translates into a change in the circadian period. Our model can reproduce the results of two independent experiments, magnetic field and lithium effects on the circadian clock. Our model predicts that stronger magnetic fields would shorten the clock's period. We also predict that lithium influences the clock in an isotope-dependent manner. Furthermore, our model also predicts that magnetic fields and hyperfine interactions modulate oxidative stress. The findings of this work suggest that the quantum nature of radical pairs might play roles in the brain, as another piece of evidence in addition to recent results on xenon anesthesia and lithium effects on hyperactivity.
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Affiliation(s)
- Hadi Zadeh-Haghighi
- Department of Physics and Astronomy, University of Calgary, Calgary, AB, T2N 1N4, Canada.
- Institute for Quantum Science and Technology, University of Calgary, Calgary, AB, T2N 1N4, Canada.
- Hotchkiss Brain Institute, University of Calgary, Calgary, AB, T2N 1N4, Canada.
| | - Christoph Simon
- Department of Physics and Astronomy, University of Calgary, Calgary, AB, T2N 1N4, Canada.
- Institute for Quantum Science and Technology, University of Calgary, Calgary, AB, T2N 1N4, Canada.
- Hotchkiss Brain Institute, University of Calgary, Calgary, AB, T2N 1N4, Canada.
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13
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Babcock N, Kattnig DR. Radical Scavenging Could Answer the Challenge Posed by Electron-Electron Dipolar Interactions in the Cryptochrome Compass Model. JACS AU 2021; 1:2033-2046. [PMID: 34841416 PMCID: PMC8611662 DOI: 10.1021/jacsau.1c00332] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/29/2021] [Indexed: 06/13/2023]
Abstract
Many birds are endowed with a visual magnetic sense that may exploit magnetosensitive radical recombination processes in the protein cryptochrome. In this widely accepted but unproven model, geomagnetic sensitivity is suggested to arise from variations in the recombination rate of a pair of radicals, whose unpaired electron spins undergo coherent singlet-triplet interconversion in the geomagnetic field by coupling to nuclear spins via hyperfine interactions. However, simulations of this conventional radical pair mechanism (RPM) predicted only tiny magnetosensitivities for realistic conditions because the RPM's directional sensitivity is strongly suppressed by the intrinsic electron-electron dipolar (EED) interactions, casting doubt on its viability as a magnetic sensor. We show how this RPM-suppression problem is overcome in a three-radical system in which a third "scavenger" radical reacts with one member of the primary pair. We use this finding to predict substantial magnetic field effects that exceed those of the RPM in the presence of EED interactions in animal cryptochromes.
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Affiliation(s)
- Nathan
Sean Babcock
- Quantum
Biology Laboratory, Howard University, 2400 Sixth Street NW, Washington District of Columbia, 20059, United States of America
- Living
Systems Institute and Department of Physics University of Exeter, Stocker Road, Exeter, EX4 4QD, United Kingdom
| | - Daniel R. Kattnig
- Living
Systems Institute and Department of Physics University of Exeter, Stocker Road, Exeter, EX4 4QD, United Kingdom
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14
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Gao M, Hu J, Wang J, Liu M, Zhu X, Saeed S, Hu C, Song Z, Xu H, Wang Z. Self-Assembly of DNA molecules in magnetic Fields. NANOTECHNOLOGY 2021; 33:065603. [PMID: 34087806 DOI: 10.1088/1361-6528/ac084f] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/15/2021] [Accepted: 06/03/2021] [Indexed: 06/12/2023]
Abstract
In this work, a rich variety of self-assembled DNA patterns were obtained in the magnetic field. Herein, atomic force microscopy (AFM) was utilized to investigate the effects of the concentration of DNA solution, intensity and direction of magnetic field and modification of mica surface by different cations on the self-assembly of DNA molecules. It was found that owning to the change of the DNA concentration, even under the same magnetic field, the DNA self-assembly results were different. Thein situtest results showed that the DNA self-assembly in an magnetic field was more likely to occur in liquid phase than in gas phase. In addition, whether in a horizontal or vertical magnetic field, a single stretched dsDNA was obtained in a certain DNA concentration and magnetic field intensity. Besides, the modification of cations on the mica surface significantly increased the force between the DNA molecules and mica surface, and further changed the self-assembly of DNA molecules under the action of magnetic field.
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Affiliation(s)
- Mingyan Gao
- International Research Centre for Nano Handling and Manufacturing of China, Changchun University of Science and Technology, Changchun 130022, People's Republic of China
- Ministry of Education Key Laboratory for Cross-Scale Micro and Nano Manufacturing, Changchun University of Science and Technology, Changchun 130022, People's Republic of China
| | - Jing Hu
- International Research Centre for Nano Handling and Manufacturing of China, Changchun University of Science and Technology, Changchun 130022, People's Republic of China
- Ministry of Education Key Laboratory for Cross-Scale Micro and Nano Manufacturing, Changchun University of Science and Technology, Changchun 130022, People's Republic of China
| | - Jianfei Wang
- International Research Centre for Nano Handling and Manufacturing of China, Changchun University of Science and Technology, Changchun 130022, People's Republic of China
- Ministry of Education Key Laboratory for Cross-Scale Micro and Nano Manufacturing, Changchun University of Science and Technology, Changchun 130022, People's Republic of China
| | - Mengnan Liu
- International Research Centre for Nano Handling and Manufacturing of China, Changchun University of Science and Technology, Changchun 130022, People's Republic of China
- Ministry of Education Key Laboratory for Cross-Scale Micro and Nano Manufacturing, Changchun University of Science and Technology, Changchun 130022, People's Republic of China
| | - Xiaona Zhu
- International Research Centre for Nano Handling and Manufacturing of China, Changchun University of Science and Technology, Changchun 130022, People's Republic of China
- Ministry of Education Key Laboratory for Cross-Scale Micro and Nano Manufacturing, Changchun University of Science and Technology, Changchun 130022, People's Republic of China
| | - Sadaf Saeed
- International Research Centre for Nano Handling and Manufacturing of China, Changchun University of Science and Technology, Changchun 130022, People's Republic of China
- Ministry of Education Key Laboratory for Cross-Scale Micro and Nano Manufacturing, Changchun University of Science and Technology, Changchun 130022, People's Republic of China
| | - Cuihua Hu
- International Research Centre for Nano Handling and Manufacturing of China, Changchun University of Science and Technology, Changchun 130022, People's Republic of China
- Ministry of Education Key Laboratory for Cross-Scale Micro and Nano Manufacturing, Changchun University of Science and Technology, Changchun 130022, People's Republic of China
| | - Zhengxun Song
- International Research Centre for Nano Handling and Manufacturing of China, Changchun University of Science and Technology, Changchun 130022, People's Republic of China
- Ministry of Education Key Laboratory for Cross-Scale Micro and Nano Manufacturing, Changchun University of Science and Technology, Changchun 130022, People's Republic of China
| | - Hongmei Xu
- International Research Centre for Nano Handling and Manufacturing of China, Changchun University of Science and Technology, Changchun 130022, People's Republic of China
- Ministry of Education Key Laboratory for Cross-Scale Micro and Nano Manufacturing, Changchun University of Science and Technology, Changchun 130022, People's Republic of China
| | - Zuobin Wang
- International Research Centre for Nano Handling and Manufacturing of China, Changchun University of Science and Technology, Changchun 130022, People's Republic of China
- Ministry of Education Key Laboratory for Cross-Scale Micro and Nano Manufacturing, Changchun University of Science and Technology, Changchun 130022, People's Republic of China
- JR3CN & IRAC, University of Bedfordshire, Luton LU1 3JU, United Kingdom
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15
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Harvey SM, Wasielewski MR. Photogenerated Spin-Correlated Radical Pairs: From Photosynthetic Energy Transduction to Quantum Information Science. J Am Chem Soc 2021; 143:15508-15529. [PMID: 34533930 DOI: 10.1021/jacs.1c07706] [Citation(s) in RCA: 38] [Impact Index Per Article: 12.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
More than a half century ago, the NMR spectra of diamagnetic products resulting from radical pair reactions were observed to have strongly enhanced absorptive and emissive resonances. At the same time, photogenerated radical pairs were discovered to exhibit unusual electron paramagnetic resonance spectra that also had such resonances. These non-Boltzmann, spin-polarized spectra were observed in both chemical systems as well as in photosynthetic reaction center proteins following photodriven charge separation. Subsequent studies of these phenomena led to a variety of chemical electron donor-acceptor model systems that provided a broad understanding of the spin dynamics responsible for these spectra. When the distance between the two radicals is restricted, these observations result from the formation of spin-correlated radical pairs (SCRPs) in which the spin-spin exchange and dipolar interactions between the two unpaired spins play an important role in the spin dynamics. Early on, it was recognized that SCRPs photogenerated by ultrafast electron transfer are entangled spin pairs created in a well-defined spin state. These SCRPs can serve as spin qubit pairs (SQPs), whose spin dynamics can be manipulated to study a wide variety of quantum phenomena intrinsic to the field of quantum information science. This Perspective highlights the role of SCRPs as SQPs, gives examples of possible quantum manipulations using SQPs, and provides some thoughts on future directions.
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Affiliation(s)
- Samantha M Harvey
- Department of Chemistry, Center for Molecular Quantum Transduction, and Institute for Sustainability and Energy at Northwestern, Northwestern University, Evanston, Illinois 60208-3113, United States
| | - Michael R Wasielewski
- Department of Chemistry, Center for Molecular Quantum Transduction, and Institute for Sustainability and Energy at Northwestern, Northwestern University, Evanston, Illinois 60208-3113, United States
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16
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Cellini A, Yuan Wahlgren W, Henry L, Pandey S, Ghosh S, Castillon L, Claesson E, Takala H, Kübel J, Nimmrich A, Kuznetsova V, Nango E, Iwata S, Owada S, Stojković EA, Schmidt M, Ihalainen JA, Westenhoff S. The three-dimensional structure of Drosophila melanogaster (6-4) photolyase at room temperature. Acta Crystallogr D Struct Biol 2021; 77:1001-1009. [PMID: 34342273 PMCID: PMC8329860 DOI: 10.1107/s2059798321005830] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2020] [Accepted: 06/06/2021] [Indexed: 11/10/2022] Open
Abstract
(6-4) photolyases are flavoproteins that belong to the photolyase/cryptochrome family. Their function is to repair DNA lesions using visible light. Here, crystal structures of Drosophila melanogaster (6-4) photolyase [Dm(6-4)photolyase] at room and cryogenic temperatures are reported. The room-temperature structure was solved to 2.27 Å resolution and was obtained by serial femtosecond crystallography (SFX) using an X-ray free-electron laser. The crystallization and preparation conditions are also reported. The cryogenic structure was solved to 1.79 Å resolution using conventional X-ray crystallography. The structures agree with each other, indicating that the structural information obtained from crystallography at cryogenic temperature also applies at room temperature. Furthermore, UV-Vis absorption spectroscopy confirms that Dm(6-4)photolyase is photoactive in the crystals, giving a green light to time-resolved SFX studies on the protein, which can reveal the structural mechanism of the photoactivated protein in DNA repair.
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Affiliation(s)
- Andrea Cellini
- Department of Chemistry and Molecular Biology, University of Gothenburg, Box 462, 405 30 Gothenburg, Sweden
| | - Weixiao Yuan Wahlgren
- Department of Chemistry and Molecular Biology, University of Gothenburg, Box 462, 405 30 Gothenburg, Sweden
| | - Léocadie Henry
- Department of Chemistry and Molecular Biology, University of Gothenburg, Box 462, 405 30 Gothenburg, Sweden
| | - Suraj Pandey
- Physics Department, University of Wisconsin-Milwaukee, 3135 North Maryland Avenue, Milwaukee, WI 53211, USA
| | - Swagatha Ghosh
- Department of Chemistry and Molecular Biology, University of Gothenburg, Box 462, 405 30 Gothenburg, Sweden
| | - Leticia Castillon
- Department of Chemistry and Molecular Biology, University of Gothenburg, Box 462, 405 30 Gothenburg, Sweden
| | - Elin Claesson
- Department of Chemistry and Molecular Biology, University of Gothenburg, Box 462, 405 30 Gothenburg, Sweden
| | - Heikki Takala
- Department of Biological and Environmental Science, Nanoscience Center, University of Jyvaskyla, 40014 Jyvaskyla, Finland
- Department of Anatomy, Faculty of Medicine, University of Helsinki, Box 63, 00014 Helsinki, Finland
| | - Joachim Kübel
- Department of Chemistry and Molecular Biology, University of Gothenburg, Box 462, 405 30 Gothenburg, Sweden
| | - Amke Nimmrich
- Department of Chemistry and Molecular Biology, University of Gothenburg, Box 462, 405 30 Gothenburg, Sweden
| | - Valentyna Kuznetsova
- Department of Biological and Environmental Science, Nanoscience Center, University of Jyvaskyla, 40014 Jyvaskyla, Finland
| | - Eriko Nango
- Department of Cell Biology, Graduate School of Medicine, Kyoto University, Yoshidakonoe-cho, Sakyo-ku, Kyoto 606-8501, Japan
- RIKEN SPring-8 Center, 1-1-1 Kouto, Sayo-cho, Sayo-gun, Hyogo 679-5148, Japan
- Japan Synchrotron Radiation Research Institute, 1-1-1 Kouto, Sayo-cho, Sayo-gun, Hyogo 679-5198, Japan
- Institute of Multidisciplinary Research for Advanced Materials, Tohoku University, 2-1-1 Katahira, Aoba-ku, Sendai 980-8577, Japan
| | - So Iwata
- Department of Cell Biology, Graduate School of Medicine, Kyoto University, Yoshidakonoe-cho, Sakyo-ku, Kyoto 606-8501, Japan
- RIKEN SPring-8 Center, 1-1-1 Kouto, Sayo-cho, Sayo-gun, Hyogo 679-5148, Japan
- Japan Synchrotron Radiation Research Institute, 1-1-1 Kouto, Sayo-cho, Sayo-gun, Hyogo 679-5198, Japan
| | - Shigeki Owada
- Department of Cell Biology, Graduate School of Medicine, Kyoto University, Yoshidakonoe-cho, Sakyo-ku, Kyoto 606-8501, Japan
- RIKEN SPring-8 Center, 1-1-1 Kouto, Sayo-cho, Sayo-gun, Hyogo 679-5148, Japan
- Japan Synchrotron Radiation Research Institute, 1-1-1 Kouto, Sayo-cho, Sayo-gun, Hyogo 679-5198, Japan
| | - Emina A. Stojković
- Department of Biology, Northeastern Illinois University, 5500 North St Louis Avenue, Chicago, IL 60625, USA
| | - Marius Schmidt
- Physics Department, University of Wisconsin-Milwaukee, 3135 North Maryland Avenue, Milwaukee, WI 53211, USA
| | - Janne A. Ihalainen
- Department of Biological and Environmental Science, Nanoscience Center, University of Jyvaskyla, 40014 Jyvaskyla, Finland
| | - Sebastian Westenhoff
- Department of Chemistry and Molecular Biology, University of Gothenburg, Box 462, 405 30 Gothenburg, Sweden
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17
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Magnetic sensitivity of cryptochrome 4 from a migratory songbird. Nature 2021; 594:535-540. [PMID: 34163056 DOI: 10.1038/s41586-021-03618-9] [Citation(s) in RCA: 124] [Impact Index Per Article: 41.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/17/2019] [Accepted: 05/06/2021] [Indexed: 02/06/2023]
Abstract
Night-migratory songbirds are remarkably proficient navigators1. Flying alone and often over great distances, they use various directional cues including, crucially, a light-dependent magnetic compass2,3. The mechanism of this compass has been suggested to rely on the quantum spin dynamics of photoinduced radical pairs in cryptochrome flavoproteins located in the retinas of the birds4-7. Here we show that the photochemistry of cryptochrome 4 (CRY4) from the night-migratory European robin (Erithacus rubecula) is magnetically sensitive in vitro, and more so than CRY4 from two non-migratory bird species, chicken (Gallus gallus) and pigeon (Columba livia). Site-specific mutations of ErCRY4 reveal the roles of four successive flavin-tryptophan radical pairs in generating magnetic field effects and in stabilizing potential signalling states in a way that could enable sensing and signalling functions to be independently optimized in night-migratory birds.
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18
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Karki N, Vergish S, Zoltowski BD. Cryptochromes: Photochemical and structural insight into magnetoreception. Protein Sci 2021; 30:1521-1534. [PMID: 33993574 DOI: 10.1002/pro.4124] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2021] [Revised: 05/10/2021] [Accepted: 05/11/2021] [Indexed: 12/21/2022]
Abstract
Cryptochromes (CRYs) function as blue light photoreceptors in diverse physiological processes in nearly all kingdoms of life. Over the past several decades, they have emerged as the most likely candidates for light-dependent magnetoreception in animals, however, a long history of conflicts between in vitro photochemistry and in vivo behavioral data complicate validation of CRYs as a magnetosensor. In this review, we highlight the origins of conflicts regarding CRY photochemistry and signal transduction, and identify recent data that provides clarity on potential mechanisms of signal transduction in magnetoreception. The review primarily focuses on examining differences in photochemistry and signal transduction in plant and animal CRYs, and identifies potential modes of convergent evolution within these independent lineages that may identify conserved signaling pathways.
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Affiliation(s)
- Nischal Karki
- Department of Chemistry, Southern Methodist University, Dallas, Texas, USA
| | - Satyam Vergish
- Department of Chemistry, Southern Methodist University, Dallas, Texas, USA
| | - Brian D Zoltowski
- Department of Chemistry, Southern Methodist University, Dallas, Texas, USA
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19
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Wörner J, Chen J, Bacher A, Weber S. Non-classical disproportionation revealed by photo-chemically induced dynamic nuclear polarization NMR. MAGNETIC RESONANCE (GOTTINGEN, GERMANY) 2021; 2:281-290. [PMID: 37904753 PMCID: PMC10539781 DOI: 10.5194/mr-2-281-2021] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/20/2021] [Accepted: 04/07/2021] [Indexed: 11/01/2023]
Abstract
Photo-chemically induced dynamic nuclear polarization (photo-CIDNP) was used to observe the light-induced disproportionation reaction of 6,7,8-trimethyllumazine starting out from its triplet state to generate a pair of radicals comprising a one-electron reduced and a one-electron oxidized species. Our evidence is based on the measurement of two marker proton hyperfine couplings, A iso (H(6α )) and A iso (H(8α )), which we correlated to predictions from density functional theory. The ratio of these two hyperfine couplings is reversed in the oxidized and the reduced radical species. Observation of the dismutation reaction is facilitated by the exceptional C-H acidity of the methyl group at position 7 of 6,7,8-trimethyllumazine and the slow proton exchange associated with it, which leads to NMR-distinguishable anionic (TML- ) and neutral (TMLH) protonation forms.
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Affiliation(s)
- Jakob Wörner
- Institute of Physical Chemistry, Albert-Ludwigs-Universität
Freiburg, Freiburg, 79104, Germany
| | - Jing Chen
- Institute of Physical Chemistry, Albert-Ludwigs-Universität
Freiburg, Freiburg, 79104, Germany
| | - Adelbert Bacher
- Department of Chemistry, Technical University of Munich, Garching,
85748, Germany
| | - Stefan Weber
- Institute of Physical Chemistry, Albert-Ludwigs-Universität
Freiburg, Freiburg, 79104, Germany
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20
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Abstract
This is a review of the research on the genetic effects of non-ionizing electromagnetic field (EMF), mainly on radiofrequency radiation (RFR) and static and extremely low frequency EMF (ELF-EMF). The majority of the studies are on genotoxicity (e.g., DNA damage, chromatin conformation changes, etc.) and gene expression. Genetic effects of EMF depend on various factors, including field parameters and characteristics (frequency, intensity, wave-shape), cell type, and exposure duration. The types of gene expression affected (e.g., genes involved in cell cycle arrest, apoptosis and stress responses, heat-shock proteins) are consistent with the findings that EMF causes genetic damages. Many studies reported effects in cells and animals after exposure to EMF at intensities similar to those in the public and occupational environments. The mechanisms by which effects are induced by EMF are basically unknown. Involvement of free radicals is a likely possibility. EMF also interacts synergistically with different entities on genetic functions. Interactions, particularly with chemotherapeutic compounds, raise the possibility of using EMF as an adjuvant for cancer treatment to increase the efficacy and decrease side effects of traditional chemotherapeutic drugs. Other data, such as adaptive effects and mitotic spindle aberrations after EMF exposure, further support the notion that EMF causes genetic effects in living organisms.
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Affiliation(s)
- Henry Lai
- Department of Bioengineering, University of Washington, Seattle, WA, USA
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21
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Einholz C, Nohr D, Rodriguez R, Topitsch A, Kern M, Goldmann J, Chileshe E, Okasha M, Weber S, Schleicher E. pH-dependence of signaling-state formation in Drosophila cryptochrome. Arch Biochem Biophys 2021; 700:108787. [PMID: 33545100 DOI: 10.1016/j.abb.2021.108787] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/07/2020] [Revised: 01/22/2021] [Accepted: 01/25/2021] [Indexed: 11/30/2022]
Abstract
Cryptochromes, FAD-dependent blue light photoreceptors, undergo a series of electron transfer reactions after light excitation. Time-resolved optical spectroscopy was employed to investigate the pH dependence of all light-dependent reactions in the cryptochrome from fruit flies. Signal state formation experiments on a time scale of seconds were found to be strongly pH dependent, and formation of both anionic and neutral FAD radicals could be detected, with reaction rates increasing by a factor of ~2.5 from basic to neutral pH values. Additionally, the influence of the amino acid His378 was investigated in further detail: Two protein variants, DmCry H378A and H378Q, showed significantly reduced rate constants for signal state formation, which again differed at neutral and alkaline pH values. Hence, His378 was identified as an amino acid responsible for the pronounced pH dependence; however, this amino acid can be excluded as a proton donor for the protonation of the anionic FAD radical. Other conserved amino acids appear to alter the overall polarity of the binding pocket and thus to be responsible for the pronounced pH dependence. Furthermore, the influence of pH and other experimental parameters, such as temperature, glycerol or ferricyanide concentrations, on the intermediately formed FAD-tryptophan radical pair was explored, which deprotonates on a microsecond time scale with a clear pH dependence, and subsequently recombines within milliseconds. Surprisingly, the latter reaction showed no pH dependence; potential reasons are discussed. All results are reviewed in terms of the photoreceptor and potential magnetoreceptor functions of Drosophila cryptochrome.
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Affiliation(s)
- Christopher Einholz
- Institut für Physikalische Chemie, Albert-Ludwigs-Universität Freiburg, Albertstraße 21, 79104, Freiburg, Germany
| | - Daniel Nohr
- Institut für Physikalische Chemie, Albert-Ludwigs-Universität Freiburg, Albertstraße 21, 79104, Freiburg, Germany
| | - Ryan Rodriguez
- Institut für Physikalische Chemie, Albert-Ludwigs-Universität Freiburg, Albertstraße 21, 79104, Freiburg, Germany
| | - Annika Topitsch
- Institut für Physikalische Chemie, Albert-Ludwigs-Universität Freiburg, Albertstraße 21, 79104, Freiburg, Germany
| | - Maria Kern
- Institut für Physikalische Chemie, Albert-Ludwigs-Universität Freiburg, Albertstraße 21, 79104, Freiburg, Germany
| | - Jacqueline Goldmann
- Institut für Physikalische Chemie, Albert-Ludwigs-Universität Freiburg, Albertstraße 21, 79104, Freiburg, Germany
| | - Emma Chileshe
- Institut für Physikalische Chemie, Albert-Ludwigs-Universität Freiburg, Albertstraße 21, 79104, Freiburg, Germany
| | - Moustafa Okasha
- Institut für Physikalische Chemie, Albert-Ludwigs-Universität Freiburg, Albertstraße 21, 79104, Freiburg, Germany
| | - Stefan Weber
- Institut für Physikalische Chemie, Albert-Ludwigs-Universität Freiburg, Albertstraße 21, 79104, Freiburg, Germany
| | - Erik Schleicher
- Institut für Physikalische Chemie, Albert-Ludwigs-Universität Freiburg, Albertstraße 21, 79104, Freiburg, Germany.
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22
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Wong SY, Solov'yov IA, Hore PJ, Kattnig DR. Nuclear polarization effects in cryptochrome-based magnetoreception. J Chem Phys 2021; 154:035102. [PMID: 33499614 DOI: 10.1063/5.0038947] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
The mechanism of the magnetic compass sense of migratory songbirds is thought to involve magnetically sensitive chemical reactions of light-induced radical pairs in cryptochrome proteins located in the birds' eyes. However, it is not yet clear whether this mechanism would be sensitive enough to form the basis of a viable compass. In the present work, we report spin dynamics simulations of models of cryptochrome-based radical pairs to assess whether accumulation of nuclear spin polarization in multiple photocycles could lead to significant enhancements in the sensitivity with which the proteins respond to the direction of the geomagnetic field. Although buildup of nuclear polarization appears to offer sensitivity advantages in the more idealized model systems studied, we find that these enhancements do not carry over to conditions that more closely resemble the situation thought to exist in vivo. On the basis of these simulations, we conclude that buildup of nuclear polarization seems unlikely to be a source of significant improvements in the performance of cryptochrome-based radical pair magnetoreceptors.
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Affiliation(s)
- Siu Ying Wong
- Institut für Physik, Carl-von-Ossietzky Universität Oldenburg, 26111 Oldenburg, Germany
| | - Ilia A Solov'yov
- Institut für Physik, Carl-von-Ossietzky Universität Oldenburg, 26111 Oldenburg, Germany
| | - P J Hore
- Department of Chemistry, University of Oxford, Oxford OX1 3QZ, United Kingdom
| | - Daniel R Kattnig
- Living Systems Institute and Department of Physics, University of Exeter, Exeter EX4 4QD, United Kingdom
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23
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Ren Y, Hiscock HG, Hore PJ. Angular Precision of Radical Pair Compass Magnetoreceptors. Biophys J 2021; 120:547-555. [PMID: 33421412 PMCID: PMC7896030 DOI: 10.1016/j.bpj.2020.12.023] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/16/2020] [Revised: 12/17/2020] [Accepted: 12/30/2020] [Indexed: 11/19/2022] Open
Abstract
The light-dependent magnetic compass sense of night-migratory songbirds is thought to rely on magnetically sensitive chemical reactions of radical pairs in cryptochrome proteins located in the birds' eyes. Recently, an information theory approach was developed that provides a strict lower bound on the precision with which a bird could estimate its head direction using only geomagnetic cues and a cryptochrome-based radical pair sensor. By means of this lower bound, we show here how the performance of the compass sense could be optimized by adjusting the orientation of cryptochrome molecules within photoreceptor cells, the distribution of cells around the retina, and the effects of the geomagnetic field on the photochemistry of the radical pair.
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Affiliation(s)
- Yi Ren
- Department of Chemistry, University of Oxford, Oxford, United Kingdom
| | - Hamish G Hiscock
- Department of Chemistry, Massachusetts Institute of Technology, Cambridge, Massachusetts
| | - P J Hore
- Department of Chemistry, University of Oxford, Oxford, United Kingdom.
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24
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Hong G, Pachter R, Essen LO, Ritz T. Electron transfer and spin dynamics of the radical-pair in the cryptochrome from Chlamydomonas reinhardtii by computational analysis. J Chem Phys 2020; 152:065101. [PMID: 32061221 DOI: 10.1063/1.5133019] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/30/2023] Open
Abstract
In an effort to elucidate the origin of avian magnetoreception, it was postulated that a radical-pair formed in a cryptochrome upon light activation provided the basis for the mechanism that enables an inclination compass sensitive to the geomagnetic field. Photoreduction in this case involves formation of a flavin adenine dinucleotide (FAD)-tryptophan (TRP) radical-pair, following electron transfer within a conserved TRP triad in the cryptochrome. Recently, an animal-like cryptochrome from Chlamydomonas reinhardtii (CraCRY) was analyzed, demonstrating the role of a fourth aromatic residue, which serves as a terminal electron donor in the photoreduction pathway, resulting in the creation of a more distal radical-pair and exhibiting fast electron transfer. In this work, we investigated the electron transfer in CraCRY with a combination of free energy molecular dynamics (MD) simulations, frozen density functional theory, and QM/MM MD simulations, supporting the suggestion of a proton coupled electron transfer mechanism. Spin dynamics simulations discerned details on the dependence of the singlet yield on the direction of the external magnetic field for the [FAD•- TYRH•+] and [FAD•- TYR•] radical-pairs in CraCRY, in comparison with the previously modeled [FAD•- TRPH•+] radical-pair.
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Affiliation(s)
- Gongyi Hong
- Air Force Research Laboratory, Materials and Manufacturing Directorate, Wright-Patterson Air Force Base, Ohio 45433, USA
| | - Ruth Pachter
- Air Force Research Laboratory, Materials and Manufacturing Directorate, Wright-Patterson Air Force Base, Ohio 45433, USA
| | - Lars-Oliver Essen
- Department of Chemistry, Center for Synthetic Microbiology, Philipps University, Marburg 35032, Germany
| | - Thorsten Ritz
- Department of Physics and Astronomy, University of California, Irvine, California 92697, USA
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25
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Déjean V, Konowalczyk M, Gravell J, Golesworthy MJ, Gunn C, Pompe N, Foster Vander Elst O, Tan KJ, Oxborrow M, Aarts DGAL, Mackenzie SR, Timmel CR. Detection of magnetic field effects by confocal microscopy. Chem Sci 2020; 11:7772-7781. [PMID: 34094150 PMCID: PMC8163210 DOI: 10.1039/d0sc01986k] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
Certain pairs of paramagnetic species generated under conservation of total spin angular momentum are known to undergo magnetosensitive processes. Two prominent examples of systems exhibiting these so-called magnetic field effects (MFEs) are photogenerated radical pairs created from either singlet or triplet molecular precursors, and pairs of triplet states generated by singlet fission. Here, we showcase confocal microscopy as a powerful technique for the investigation of such phenomena. We first characterise the instrument by studying the field-sensitive chemistry of two systems in solution: radical pairs formed in a cryptochrome protein and the flavin mononucleotide/hen egg-white lysozyme model system. We then extend these studies to single crystals. Firstly, we report temporally and spatially resolved MFEs in flavin-doped lysozyme single crystals. Anisotropic magnetic field effects are then reported in tetracene single crystals. Finally, we discuss the future applications of confocal microscopy for the study of magnetosensitive processes with a particular focus on the cryptochrome-based chemical compass believed to lie at the heart of animal magnetoreception. Confocal microscopy is showcased as a powerful technique for the measurement of spatiotemporally-resolved magnetic field effects in both solutions and single crystals.![]()
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Affiliation(s)
- Victoire Déjean
- Department of Chemistry, University of Oxford, Inorganic Chemistry Laboratory Oxford OX1 3QR UK
| | - Marcin Konowalczyk
- Department of Chemistry, University of Oxford, Inorganic Chemistry Laboratory Oxford OX1 3QR UK .,Department of Chemistry, University of Oxford, Physical and Theoretical Chemistry Laboratory Oxford OX1 3QZ UK
| | - Jamie Gravell
- Department of Chemistry, University of Oxford, Inorganic Chemistry Laboratory Oxford OX1 3QR UK
| | - Matthew J Golesworthy
- Department of Chemistry, University of Oxford, Inorganic Chemistry Laboratory Oxford OX1 3QR UK
| | - Catlin Gunn
- Department of Chemistry, University of Oxford, Inorganic Chemistry Laboratory Oxford OX1 3QR UK
| | - Nils Pompe
- Department of Chemistry, University of Oxford, Inorganic Chemistry Laboratory Oxford OX1 3QR UK
| | | | - Ke-Jie Tan
- Department of Materials, Imperial College London London SW7 2AZ UK
| | - Mark Oxborrow
- Department of Materials, Imperial College London London SW7 2AZ UK
| | - Dirk G A L Aarts
- Department of Chemistry, University of Oxford, Physical and Theoretical Chemistry Laboratory Oxford OX1 3QZ UK
| | - Stuart R Mackenzie
- Department of Chemistry, University of Oxford, Physical and Theoretical Chemistry Laboratory Oxford OX1 3QZ UK
| | - Christiane R Timmel
- Department of Chemistry, University of Oxford, Inorganic Chemistry Laboratory Oxford OX1 3QR UK .,Centre for Advanced Electron Spin Resonance (CAESR), Department of Chemistry, University of Oxford Oxford OX1 3QR UK
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26
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Todorović D, Ilijin L, Mrdaković M, Vlahović M, Grčić A, Petković B, Perić-Mataruga V. The impact of chronic exposure to a magnetic field on energy metabolism and locomotion of Blaptica dubia. Int J Radiat Biol 2020; 96:1076-1083. [PMID: 32412321 DOI: 10.1080/09553002.2020.1770360] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
Abstract
Purpose: This study deals with a comparative analysis of the effects of chronic exposure to a static magnetic field (SMF) and an extremely low frequency magnetic field (ELF MF) in Blaptica dubia nymphs. The outcome of such treatment on insect and fat body mass, glycogen and total lipid content in the fat body and locomotion, as an energy demanding process, were examined.Materials and methods: One-month-old nymphs of B. dubia were exposed to an SMF (110 mT) or ELF MF (50 Hz, 10 mT) for 5 months. Their locomotion was monitored in the 'open-field' test for 10 min and expressed as travel distance, time in movement and average speed while in motion. After that, fat body mass and content of its main components (glycogen and total lipids) were determined. Nymph body mass was also estimated after 1 and 5 months of MF treatment.Results: Chronic exposure to the SMF and ELF MF decreased nymph body mass and glycogen content in the fat body but increased all examined parameters of locomotion. In addition, chronic SMF treatment elevated total lipid content in the fat body, while chronic ELF MF treatment reduced fat body mass and total lipid content.Conclusions: These findings indicate that B. dubia nymphs are sensitive to the applied MFs and possess different strategies for fuel usage in response to the SMF and ELF MF in order to satisfy increased energy demands and to overcome stressful conditions.
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Affiliation(s)
- Dajana Todorović
- Department of Insect Physiology and Biochemistry, Institute for Biological Research "Siniša Stanković" - National Institute of Republic of Serbia, University of Belgrade, Belgrade, Serbia
| | - Larisa Ilijin
- Department of Insect Physiology and Biochemistry, Institute for Biological Research "Siniša Stanković" - National Institute of Republic of Serbia, University of Belgrade, Belgrade, Serbia
| | - Marija Mrdaković
- Department of Insect Physiology and Biochemistry, Institute for Biological Research "Siniša Stanković" - National Institute of Republic of Serbia, University of Belgrade, Belgrade, Serbia
| | - Milena Vlahović
- Department of Insect Physiology and Biochemistry, Institute for Biological Research "Siniša Stanković" - National Institute of Republic of Serbia, University of Belgrade, Belgrade, Serbia
| | - Anja Grčić
- Department of Insect Physiology and Biochemistry, Institute for Biological Research "Siniša Stanković" - National Institute of Republic of Serbia, University of Belgrade, Belgrade, Serbia
| | - Branka Petković
- Department of Neurophysiology, Institute for Biological Research "Siniša Stanković" - National Institute of Republic of Serbia, University of Belgrade, Belgrade, Serbia
| | - Vesna Perić-Mataruga
- Department of Insect Physiology and Biochemistry, Institute for Biological Research "Siniša Stanković" - National Institute of Republic of Serbia, University of Belgrade, Belgrade, Serbia
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27
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Wu H, Scholten A, Einwich A, Mouritsen H, Koch KW. Protein-protein interaction of the putative magnetoreceptor cryptochrome 4 expressed in the avian retina. Sci Rep 2020; 10:7364. [PMID: 32355203 PMCID: PMC7193638 DOI: 10.1038/s41598-020-64429-y] [Citation(s) in RCA: 30] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/12/2019] [Accepted: 04/16/2020] [Indexed: 11/15/2022] Open
Abstract
Migratory birds can sense the Earth’s magnetic field and use it for orientation over thousands of kilometres. A light-dependent radical-pair mechanism associated with the visual system is currently discussed as the underlying mechanism of the magnetic compass sense. The blue light receptor cryptochrome 4 (Cry4) is considered as the most likely primary sensory protein that detects the geomagnetic field. Since the protein interaction partners of Cry4 are completely unknown at present, here, we aim to identify potential candidate interaction partners of Cry4 in the avian retina. We used the yeast-two-hybrid system to screen avian cDNA libraries for possible interaction partners of Cry4 in the European robin. The UAS-GAL yeast two hybrid system was applied to confirm a group of candidate Cry4 interaction partners. Six proteins were found to be particularly promising candidates for interacting with European robin Cry4. The identified genes code for guanine nucleotide-binding protein G(t) subunit alpha-2 (GNAT2), long-wavelength-sensitive opsin (LWS, also called iodopsin), guanine nucleotide-binding protein subunit gamma 10 (GNG10), potassium voltage-gated channel subfamily V member 2 (KCNV2), retinol binding protein 1 (RBP1) and retinal G protein-coupled receptor (RGR). All genes are known to be expressed in vertebrate retinae of different species. We conclude by discussing putative signalling pathways that could connect cryptochrome 4 to one or more of these 6 candidates.
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Affiliation(s)
- Haijia Wu
- Department of Neuroscience, Division of Biochemistry, University of Oldenburg, D-26111, Oldenburg, Germany
| | - Alexander Scholten
- Department of Neuroscience, Division of Biochemistry, University of Oldenburg, D-26111, Oldenburg, Germany
| | - Angelika Einwich
- Department of Biology and Environmental Sciences, Neurosensorics/Animal Navigation, University of Oldenburg, D-26111, Oldenburg, Germany
| | - Henrik Mouritsen
- Department of Biology and Environmental Sciences, Neurosensorics/Animal Navigation, University of Oldenburg, D-26111, Oldenburg, Germany.,Research Center for Neurosensory Sciences, University of Oldenburg, 26111, Oldenburg, Germany
| | - Karl-Wilhelm Koch
- Department of Neuroscience, Division of Biochemistry, University of Oldenburg, D-26111, Oldenburg, Germany. .,Research Center for Neurosensory Sciences, University of Oldenburg, 26111, Oldenburg, Germany.
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28
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Babcock N, Kattnig DR. Electron-Electron Dipolar Interaction Poses a Challenge to the Radical Pair Mechanism of Magnetoreception. J Phys Chem Lett 2020; 11:2414-2421. [PMID: 32141754 PMCID: PMC7145362 DOI: 10.1021/acs.jpclett.0c00370] [Citation(s) in RCA: 30] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/04/2020] [Accepted: 03/06/2020] [Indexed: 06/10/2023]
Abstract
A visual magnetic sense in migratory birds has been hypothesized to rely on a radical pair reaction in the protein cryptochrome. In this model, magnetic sensitivity originates from coherent spin dynamics, as the radicals couple to magnetic nuclei via hyperfine interactions. Prior studies have often neglected the electron-electron dipolar (EED) coupling from this hypothesis. We show that EED interactions suppress the anisotropic response to the geomagnetic field by the radical pair mechanism in cryptochrome and that this attenuation is unlikely to be mitigated by mutual cancellation of the EED and electronic exchange coupling, as previously suggested. We then demonstrate that this limitation may be overcome by extending the conventional model to include a third, nonreacting radical. We predict that hyperfine effects could work in concert with three-radical dipolar interactions to tailor a superior magnetic response, thereby providing a new principle for magnetosensitivity with applications for sensing, navigation, and the assessment of biological magnetic field effects.
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Affiliation(s)
- Nathan
S. Babcock
- Living Systems Institute and Department
of Physics, University of Exeter, Stocker Road, Exeter EX4 4QD, United
Kingdom
| | - Daniel R. Kattnig
- Living Systems Institute and Department
of Physics, University of Exeter, Stocker Road, Exeter EX4 4QD, United
Kingdom
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29
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Vanderstraeten J, Gailly P, Malkemper EP. Light entrainment of retinal biorhythms: cryptochrome 2 as candidate photoreceptor in mammals. Cell Mol Life Sci 2020; 77:875-884. [PMID: 31982933 PMCID: PMC11104904 DOI: 10.1007/s00018-020-03463-5] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/21/2019] [Revised: 01/08/2020] [Accepted: 01/14/2020] [Indexed: 12/31/2022]
Abstract
The mechanisms that synchronize the biorhythms of the mammalian retina with the light/dark cycle are independent of those synchronizing the rhythms in the central pacemaker, the suprachiasmatic nucleus. The identity of the photoreceptor(s) responsible for the light entrainment of the retina of mammals is still a matter of debate, and recent studies have reported contradictory results in this respect. Here, we suggest that cryptochromes (CRY), in particular CRY 2, are involved in that light entrainment. CRY are highly conserved proteins that are a key component of the cellular circadian clock machinery. In plants and insects, they are responsible for the light entrainment of these biorhythms, mediated by the light response of their flavin cofactor (FAD). In mammals, however, no light-dependent role is currently assumed for CRY in light-exposed tissues, including the retina. It has been reported that FAD influences the function of mammalian CRY 2 and that human CRY 2 responds to light in Drosophila, suggesting that mammalian CRY 2 keeps the ability to respond to light. Here, we hypothesize that CRY 2 plays a role in the light entrainment of retinal biorhythms, at least in diurnal mammals. Indeed, published data shows that the light intensity dependence and the wavelength sensitivity commonly reported for that light entrainment fits the light sensitivity and absorption spectrum of light-responsive CRY. We propose experiments to test our hypothesis and to further explore the still-pending question of the function of CRY 2 in the mammalian retina.
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Affiliation(s)
- Jacques Vanderstraeten
- Faculty of Medicine, School of Public Health, Environmental and Work Health Research Center, Université Libre de Bruxelles, CP593, Route de Lennik, 808, 1070, Brussels, Belgium.
- , Avenue Constant Montald, 11, 1200, Brussels, Belgium.
| | - Philippe Gailly
- Faculty of Medicine, Institute of Neuroscience (IONS), Cellular and Molecular Pole (CEMO), Catholic University of Louvain, Avenue Mounier 53/B1.53.17, 1200, Brussels, Belgium
| | - E Pascal Malkemper
- Center of Advanced European Studies and Research (CAESAR), Ludwig-Erhard-Allee 2, Bonn, 53175, Germany
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30
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Player TC, Hore PJ. Viability of superoxide-containing radical pairs as magnetoreceptors. J Chem Phys 2020; 151:225101. [PMID: 31837685 DOI: 10.1063/1.5129608] [Citation(s) in RCA: 30] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022] Open
Abstract
The ability of night-migratory songbirds to sense the direction of the Earth's magnetic field is increasingly attributed to a photochemical mechanism in which the magnetic field acts on transient radical pairs in cryptochrome flavoproteins located in the birds' eyes. The magnetically sensitive species is commonly assumed to be [FAD•- TrpH•+], formed by sequential light-induced intraprotein electron transfers from a chain of tryptophan residues to the flavin adenine dinucleotide chromophore. However, some evidence points to superoxide, O2 •-, as an alternative partner for the flavin radical. The absence of hyperfine interactions in O2 •- could lead to a more sensitive magnetic compass, but only if the electron spin relaxation of the O2 •- radical is much slower than normally expected for a small mobile radical with an orbitally degenerate electronic ground state. In this study we use spin dynamics simulations to model the sensitivity of a flavin-superoxide radical pair to the direction of a 50 μT magnetic field. By varying parameters that characterize the local environment and molecular dynamics of the radicals, we identify the highly restrictive conditions under which a O2 •--containing radical pair could form the basis of a geomagnetic compass sensor. We conclude that the involvement of superoxide in compass magnetoreception must remain highly speculative until further experimental evidence is forthcoming.
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Affiliation(s)
- Thomas C Player
- Physical and Theoretical Chemistry Laboratory, Department of Chemistry, University of Oxford, Oxford, United Kingdom
| | - P J Hore
- Physical and Theoretical Chemistry Laboratory, Department of Chemistry, University of Oxford, Oxford, United Kingdom
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31
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Hammad M, Albaqami M, Pooam M, Kernevez E, Witczak J, Ritz T, Martino C, Ahmad M. Cryptochrome mediated magnetic sensitivity in Arabidopsis occurs independently of light-induced electron transfer to the flavin. Photochem Photobiol Sci 2020; 19:341-352. [DOI: 10.1039/c9pp00469f] [Citation(s) in RCA: 29] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
Arabidopsis cryptochrome-dependent magnetosensitivity occurs via a reaction that does not require light. This excludes radical pairs formed during light-triggered electron transfer to the flavin.
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Affiliation(s)
- M. Hammad
- Sorbonne Universités – UPMC Paris 6 – CNRS
- UMR8256 - IBPS
- Photobiology Research Group
- 75005 Paris
- France
| | - M. Albaqami
- Sorbonne Universités – UPMC Paris 6 – CNRS
- UMR8256 - IBPS
- Photobiology Research Group
- 75005 Paris
- France
| | - M. Pooam
- Sorbonne Universités – UPMC Paris 6 – CNRS
- UMR8256 - IBPS
- Photobiology Research Group
- 75005 Paris
- France
| | - E. Kernevez
- Sorbonne Universités – UPMC Paris 6 – CNRS
- UMR8256 - IBPS
- Photobiology Research Group
- 75005 Paris
- France
| | - J. Witczak
- Sorbonne Universités – UPMC Paris 6 – CNRS
- UMR8256 - IBPS
- Photobiology Research Group
- 75005 Paris
- France
| | - T. Ritz
- Department of Physics and Astronomy
- University of California at Irvine
- USA
| | - C. Martino
- Department of Biomedical and Chemical Engineering and Science
- Florida Institute of Technology
- Melbourne
- USA
| | - M. Ahmad
- Sorbonne Universités – UPMC Paris 6 – CNRS
- UMR8256 - IBPS
- Photobiology Research Group
- 75005 Paris
- France
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32
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Kobylkov D, Wynn J, Winklhofer M, Chetverikova R, Xu J, Hiscock H, Hore PJ, Mouritsen H. Electromagnetic 0.1-100 kHz noise does not disrupt orientation in a night-migrating songbird implying a spin coherence lifetime of less than 10 µs. J R Soc Interface 2019; 16:20190716. [PMID: 31847760 DOI: 10.1098/rsif.2019.0716] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
According to the currently prevailing theory, the magnetic compass sense in night-migrating birds relies on a light-dependent radical-pair-based mechanism. It has been shown that radio waves at megahertz frequencies disrupt magnetic orientation in migratory birds, providing evidence for a quantum-mechanical origin of the magnetic compass. Still, many crucial properties, e.g. the lifetime of the proposed magnetically sensitive radical pair, remain unknown. The current study aims to estimate the spin coherence time of the radical pair, based on the behavioural responses of migratory birds to broadband electromagnetic fields covering the frequency band 0.1-100 kHz. A finding that the birds were unable to use their magnetic compass under these conditions would imply surprisingly long-lived (greater than 10 µs) spin coherence. However, we observed no effect of 0.1-100 kHz radiofrequency (RF) fields on the orientation of night-migratory Eurasian blackcaps (Sylvia atricapilla). This suggests that the lifetime of the spin coherence involved in magnetoreception is shorter than the period of the highest frequency RF fields used in this experiment (i.e. approx. 10 µs). This result, in combination with an earlier study showing that 20-450 kHz electromagnetic fields disrupt magnetic compass orientation, suggests that the spin coherence lifetime of the magnetically sensitive radical pair is in the range 2-10 µs.
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Affiliation(s)
- Dmitry Kobylkov
- AG 'Neurosensorik', University Oldenburg, 26111 Oldenburg, Germany.,Research Centre for Neurosensory Sciences, University Oldenburg, 26111 Oldenburg, Germany
| | - Joe Wynn
- Oxford Navigation Group, Department of Zoology, University of Oxford, Oxford, UK
| | - Michael Winklhofer
- AG 'Neurosensorik', University Oldenburg, 26111 Oldenburg, Germany.,AG 'Sensory Biology of Animals', University Oldenburg, 26111 Oldenburg, Germany
| | - Raisa Chetverikova
- AG 'Neurosensorik', University Oldenburg, 26111 Oldenburg, Germany.,Research Centre for Neurosensory Sciences, University Oldenburg, 26111 Oldenburg, Germany
| | - Jingjing Xu
- AG 'Neurosensorik', University Oldenburg, 26111 Oldenburg, Germany.,Research Centre for Neurosensory Sciences, University Oldenburg, 26111 Oldenburg, Germany
| | - Hamish Hiscock
- Physical and Theoretical Chemistry Laboratory, Department of Chemistry, University of Oxford, Oxford, UK
| | - P J Hore
- Physical and Theoretical Chemistry Laboratory, Department of Chemistry, University of Oxford, Oxford, UK
| | - Henrik Mouritsen
- AG 'Neurosensorik', University Oldenburg, 26111 Oldenburg, Germany.,Research Centre for Neurosensory Sciences, University Oldenburg, 26111 Oldenburg, Germany
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33
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Nielsen C, Solov’yov IA. MolSpin—Flexible and extensible general spin dynamics software. J Chem Phys 2019; 151:194105. [DOI: 10.1063/1.5125043] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Claus Nielsen
- Department of Physics, Chemistry and Pharmacy, University of Southern Denmark, DK-5230 Odense M, Denmark
| | - Ilia A. Solov’yov
- Department of Physics, Carl von Ossietzky Universität Oldenburg, Carl-von-Ossietzky-Straße 9-11, 26129 Oldenburg, Germany
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34
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Navigating at night: fundamental limits on the sensitivity of radical pair magnetoreception under dim light. Q Rev Biophys 2019; 52:e9. [DOI: 10.1017/s0033583519000076] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Abstract
Abstract
Night-migratory songbirds appear to sense the direction of the Earth's magnetic field via radical pair intermediates formed photochemically in cryptochrome flavoproteins contained in photoreceptor cells in their retinas. It is an open question whether this light-dependent mechanism could be sufficiently sensitive given the low-light levels experienced by nocturnal migrants. The scarcity of available photons results in significant uncertainty in the signal generated by the magnetoreceptors distributed around the retina. Here we use results from Information Theory to obtain a lower bound estimate of the precision with which a bird could orient itself using only geomagnetic cues. Our approach bypasses the current lack of knowledge about magnetic signal transduction and processing in vivo by computing the best-case compass precision under conditions where photons are in short supply. We use this method to assess the performance of three plausible cryptochrome-derived flavin-containing radical pairs as potential magnetoreceptors.
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35
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Rugg BK, Krzyaniak MD, Phelan BT, Ratner MA, Young RM, Wasielewski MR. Photodriven quantum teleportation of an electron spin state in a covalent donor–acceptor–radical system. Nat Chem 2019; 11:981-986. [DOI: 10.1038/s41557-019-0332-8] [Citation(s) in RCA: 51] [Impact Index Per Article: 10.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/27/2019] [Accepted: 08/13/2019] [Indexed: 11/09/2022]
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36
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Lai H. Exposure to Static and Extremely-Low Frequency Electromagnetic Fields and Cellular Free Radicals. Electromagn Biol Med 2019; 38:231-248. [PMID: 31450976 DOI: 10.1080/15368378.2019.1656645] [Citation(s) in RCA: 43] [Impact Index Per Article: 8.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Abstract
This paper summarizes studies on changes in cellular free radical activities from exposure to static and extremely-low frequency (ELF) electromagnetic fields (EMF), particularly magnetic fields. Changes in free radical activities, including levels of cellular reactive oxygen (ROS)/nitrogen (RNS) species and endogenous antioxidant enzymes and compounds that maintain physiological free radical concentrations in cells, is one of the most consistent effects of EMF exposure. These changes have been reported to affect many physiological functions such as DNA damage; immune response; inflammatory response; cell proliferation and differentiation; wound healing; neural electrical activities; and behavior. An important consideration is the effects of EMF-induced changes in free radicals on cell proliferation and differentiation. These cellular processes could affect cancer development and proper growth and development in organisms. On the other hand, they could cause selective killing of cancer cells, for instance, via the generation of the highly cytotoxic hydroxyl free radical by the Fenton Reaction. This provides a possibility of using these electromagnetic fields as a non-invasive and low side-effect cancer therapy. Static- and ELF-EMF probably play important roles in the evolution of living organisms. They are cues used in many critical survival functions, such as foraging, migration, and reproduction. Living organisms can detect and respond immediately to low environmental levels of these fields. Free radical processes are involved in some of these mechanisms. At this time, there is no credible hypothesis or mechanism that can adequately explain all the observed effects of static- and ELF-EMF on free radical processes. We are actually at the impasse that there are more questions than answers.
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Affiliation(s)
- Henry Lai
- Department of Bioengineering, University of Washington , Seattle , WA , USA
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37
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Kerpal C, Richert S, Storey JG, Pillai S, Liddell PA, Gust D, Mackenzie SR, Hore PJ, Timmel CR. Chemical compass behaviour at microtesla magnetic fields strengthens the radical pair hypothesis of avian magnetoreception. Nat Commun 2019; 10:3707. [PMID: 31420558 PMCID: PMC6697675 DOI: 10.1038/s41467-019-11655-2] [Citation(s) in RCA: 25] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/16/2019] [Accepted: 07/15/2019] [Indexed: 12/02/2022] Open
Abstract
The fact that many animals, including migratory birds, use the Earth's magnetic field for orientation and compass-navigation is fascinating and puzzling in equal measure. The physical origin of these phenomena has not yet been fully understood, but arguably the most likely hypothesis is based on the radical pair mechanism (RPM). Whilst the theoretical framework of the RPM is well-established, most experimental investigations have been conducted at fields several orders of magnitude stronger than the Earth's. Here we use transient absorption spectroscopy to demonstrate a pronounced orientation-dependence of the magnetic field response of a molecular triad system in the field region relevant to avian magnetoreception. The chemical compass response exhibits the properties of an inclination compass as found in migratory birds. The results underline the feasibility of a radical pair based avian compass and also provide further guidelines for the design and operation of exploitable chemical compass systems.
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Affiliation(s)
- Christian Kerpal
- Centre for Advanced Electron Spin Resonance (CÆSR), Department of Chemistry, University of Oxford, South Parks Road, Oxford, OX1 3QR, UK
| | - Sabine Richert
- Centre for Advanced Electron Spin Resonance (CÆSR), Department of Chemistry, University of Oxford, South Parks Road, Oxford, OX1 3QR, UK
| | - Jonathan G Storey
- Centre for Advanced Electron Spin Resonance (CÆSR), Department of Chemistry, University of Oxford, South Parks Road, Oxford, OX1 3QR, UK
| | - Smitha Pillai
- School of Molecular Sciences, Department of Chemistry and Biochemistry, Arizona State University, Tempe, AZ, 85281, USA
| | - Paul A Liddell
- School of Molecular Sciences, Department of Chemistry and Biochemistry, Arizona State University, Tempe, AZ, 85281, USA
| | - Devens Gust
- School of Molecular Sciences, Department of Chemistry and Biochemistry, Arizona State University, Tempe, AZ, 85281, USA
| | - Stuart R Mackenzie
- Physical and Theoretical Chemistry Laboratory, Department of Chemistry, University of Oxford, South Parks Road, Oxford, OX1 3QZ, UK
| | - P J Hore
- Physical and Theoretical Chemistry Laboratory, Department of Chemistry, University of Oxford, South Parks Road, Oxford, OX1 3QZ, UK
| | - Christiane R Timmel
- Centre for Advanced Electron Spin Resonance (CÆSR), Department of Chemistry, University of Oxford, South Parks Road, Oxford, OX1 3QR, UK.
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38
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Atkins C, Bajpai K, Rumball J, Kattnig DR. On the optimal relative orientation of radicals in the cryptochrome magnetic compass. J Chem Phys 2019. [DOI: 10.1063/1.5115445] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Chadsley Atkins
- Institute and Department of Physics, University of Exeter, North Park Road, Exeter EX4 4QL, United Kingdom
| | - Kieran Bajpai
- Institute and Department of Physics, University of Exeter, North Park Road, Exeter EX4 4QL, United Kingdom
| | - Jeremy Rumball
- Institute and Department of Physics, University of Exeter, North Park Road, Exeter EX4 4QL, United Kingdom
| | - Daniel R. Kattnig
- Institute and Department of Physics, University of Exeter, North Park Road, Exeter EX4 4QL, United Kingdom
- Living Systems Institute and Department of Physics, University of Exeter, Stocker Road, Exeter EX4 4QD, United Kingdom
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39
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Bialas C, Barnard DT, Auman DB, McBride RA, Jarocha LE, Hore PJ, Dutton PL, Stanley RJ, Moser CC. Ultrafast flavin/tryptophan radical pair kinetics in a magnetically sensitive artificial protein. Phys Chem Chem Phys 2019; 21:13453-13461. [PMID: 31187821 DOI: 10.1039/c9cp01916b] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
Abstract
Radical pair formation and decay are implicated in a wide range of biological processes including avian magnetoreception. However, studying such biological radical pairs is complicated by both the complexity and relative fragility of natural systems. To resolve open questions about how natural flavin-amino acid radical pair systems are engineered, and to create new systems with novel properties, we developed a stable and highly adaptable de novo artificial protein system. These protein maquettes are designed with intentional simplicity and transparency to tolerate aggressive manipulations that are impractical or impossible in natural proteins. Here we characterize the ultrafast dynamics of a series of maquettes with differing electron-transfer distance between a covalently ligated flavin and a tryptophan in an environment free of other potential radical centers. We resolve the spectral signatures of the cysteine-ligated flavin singlet and triplet states and reveal the picosecond formation and recombination of singlet-born radical pairs. Magnetic field-sensitive triplet-born radical pair formation and recombination occurs at longer timescales. These results suggest that both triplet- and singlet-born radical pairs could be exploited as biological magnetic sensors.
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Affiliation(s)
- Chris Bialas
- Johnson Research Foundation, Department of Biochemistry and Biophysics, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.
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40
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Berntsson O, Rodriguez R, Henry L, Panman MR, Hughes AJ, Einholz C, Weber S, Ihalainen JA, Henning R, Kosheleva I, Schleicher E, Westenhoff S. Photoactivation of Drosophila melanogaster cryptochrome through sequential conformational transitions. SCIENCE ADVANCES 2019; 5:eaaw1531. [PMID: 31328161 PMCID: PMC6636987 DOI: 10.1126/sciadv.aaw1531] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/22/2018] [Accepted: 06/13/2019] [Indexed: 05/27/2023]
Abstract
Cryptochromes are blue-light photoreceptor proteins, which provide input to circadian clocks. The cryptochrome from Drosophila melanogaster (DmCry) modulates the degradation of Timeless and itself. It is unclear how light absorption by the chromophore and the subsequent redox reactions trigger these events. Here, we use nano- to millisecond time-resolved x-ray solution scattering to reveal the light-activated conformational changes in DmCry and the related (6-4) photolyase. DmCry undergoes a series of structural changes, culminating in the release of the carboxyl-terminal tail (CTT). The photolyase has a simpler structural response. We find that the CTT release in DmCry depends on pH. Mutation of a conserved histidine, important for the biochemical activity of DmCry, does not affect transduction of the structural signal to the CTT. Instead, molecular dynamics simulations suggest that it stabilizes the CTT in the resting-state conformation. Our structural photocycle unravels the first molecular events of signal transduction in an animal cryptochrome.
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Affiliation(s)
- Oskar Berntsson
- Department of Chemistry and Molecular Biology, University of Gothenburg, 40530 Gothenburg, Sweden
- MAX IV Laboratory, Lund University, 224 84 Lund, Sweden
| | - Ryan Rodriguez
- Institute of Physical Chemistry, Albert-Ludwigs-Universität Freiburg, 79104 Freiburg, Germany
| | - Léocadie Henry
- Department of Chemistry and Molecular Biology, University of Gothenburg, 40530 Gothenburg, Sweden
| | - Matthijs R. Panman
- Department of Chemistry and Molecular Biology, University of Gothenburg, 40530 Gothenburg, Sweden
| | - Ashley J. Hughes
- Department of Chemistry and Molecular Biology, University of Gothenburg, 40530 Gothenburg, Sweden
| | - Christopher Einholz
- Institute of Physical Chemistry, Albert-Ludwigs-Universität Freiburg, 79104 Freiburg, Germany
| | - Stefan Weber
- Institute of Physical Chemistry, Albert-Ludwigs-Universität Freiburg, 79104 Freiburg, Germany
| | - Janne A. Ihalainen
- Nanoscience Center, Department of Biological and Environmental Sciences, University of Jyväskylä, 40014 Jyväskylä, Finland
| | - Robert Henning
- Center for Advanced Radiation Sources, The University of Chicago, Chicago, IL 60637, USA
| | - Irina Kosheleva
- Center for Advanced Radiation Sources, The University of Chicago, Chicago, IL 60637, USA
| | - Erik Schleicher
- Institute of Physical Chemistry, Albert-Ludwigs-Universität Freiburg, 79104 Freiburg, Germany
| | - Sebastian Westenhoff
- Department of Chemistry and Molecular Biology, University of Gothenburg, 40530 Gothenburg, Sweden
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41
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Carnio EG, Breuer HP, Buchleitner A. Wave-Particle Duality in Complex Quantum Systems. J Phys Chem Lett 2019; 10:2121-2129. [PMID: 30965007 DOI: 10.1021/acs.jpclett.9b00676] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
Stunning progress in the experimental resolution and control of natural or man-made complex systems at the level of their quantum mechanical constituents raises the question, across diverse subdisciplines of physics, chemistry, and biology, whether the fundamental quantum nature may condition the dynamical and functional system properties on mesoscopic if not macroscopic scales. However, which are the distinctive signatures of quantum properties in complex systems, notably when modulated by environmental stochasticity and dynamical instabilities? It appears that, to settle this question across the above communities, a shared understanding is needed of the central feature of quantum mechanics: wave-particle duality. In this Perspective, we elaborate how randomness induced by this very quantum property can be discerned from the stochasticity ubiquitous in complex systems already on the classical level. We argue that in the study of increasingly complex systems, such distinction requires the analysis of single incidents of quantum dynamical processes.
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Affiliation(s)
- Edoardo G Carnio
- Physikalisches Institut , Albert-Ludwigs-Universität Freiburg , Hermann-Herder-Str. 3 , 79104 Freiburg im Breisgau , Federal Republic of Germany
| | - Heinz-Peter Breuer
- Physikalisches Institut , Albert-Ludwigs-Universität Freiburg , Hermann-Herder-Str. 3 , 79104 Freiburg im Breisgau , Federal Republic of Germany
- Freiburg Institute for Advanced Studies (FRIAS) , Albert-Ludwigs-Universität Freiburg , Albertstr. 19 , 79104 Freiburg im Breisgau , Federal Republic of Germany
| | - Andreas Buchleitner
- Physikalisches Institut , Albert-Ludwigs-Universität Freiburg , Hermann-Herder-Str. 3 , 79104 Freiburg im Breisgau , Federal Republic of Germany
- Freiburg Institute for Advanced Studies (FRIAS) , Albert-Ludwigs-Universität Freiburg , Albertstr. 19 , 79104 Freiburg im Breisgau , Federal Republic of Germany
- Erwin Schrödinger International Institute for Mathematics and Physics , University of Vienna , Boltzmanngasse 9 , 1090 Vienna , Austria
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42
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Juutilainen J, Herrala M, Luukkonen J, Naarala J, Hore PJ. Magnetocarcinogenesis: is there a mechanism for carcinogenic effects of weak magnetic fields? Proc Biol Sci 2019; 285:rspb.2018.0590. [PMID: 29794049 DOI: 10.1098/rspb.2018.0590] [Citation(s) in RCA: 35] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/25/2018] [Accepted: 04/27/2018] [Indexed: 12/13/2022] Open
Abstract
Extremely low-frequency (ELF) magnetic fields have been classified as possibly carcinogenic, mainly based on rather consistent epidemiological findings suggesting a link between childhood leukaemia and 50-60 Hz magnetic fields from power lines. However, causality is not the only possible explanation for the epidemiological associations, as animal and in vitro experiments have provided only limited support for carcinogenic effects of ELF magnetic fields. Importantly, there is no generally accepted biophysical mechanism that could explain such effects. In this review, we discuss the possibility that carcinogenic effects are based on the radical pair mechanism (RPM), which seems to be involved in magnetoreception in birds and certain other animals, allowing navigation in the geomagnetic field. We review the current understanding of the RPM in magnetoreception, and discuss cryptochromes as the putative magnetosensitive molecules and their possible links to cancer-relevant biological processes. We then propose a hypothesis for explaining the link between ELF fields and childhood leukaemia, discuss the strengths and weaknesses of the current evidence, and make proposals for further research.
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Affiliation(s)
- Jukka Juutilainen
- Department of Environmental and Biological Sciences, University of Eastern Finland, Kuopio, Finland
| | - Mikko Herrala
- Department of Environmental and Biological Sciences, University of Eastern Finland, Kuopio, Finland
| | - Jukka Luukkonen
- Department of Environmental and Biological Sciences, University of Eastern Finland, Kuopio, Finland
| | - Jonne Naarala
- Department of Environmental and Biological Sciences, University of Eastern Finland, Kuopio, Finland
| | - P J Hore
- Department of Chemistry, University of Oxford, Oxford, UK
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43
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Todorović D, Ilijin L, Mrdaković M, Vlahović M, Filipović A, Grčić A, Perić-Mataruga V. Long-term exposure of cockroach Blaptica dubia (Insecta: Blaberidae) nymphs to magnetic fields of different characteristics: effects on antioxidant biomarkers and nymphal gut mass. Int J Radiat Biol 2019; 95:1185-1193. [PMID: 30822251 DOI: 10.1080/09553002.2019.1589017] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
Purpose: The main goal of this study was to analyze the long-term effects of static (SMF) and extremely low-frequency magnetic field (ELF MF) on nymphal gut mass and antioxidant biomarkers in this tissue of cockroach Blaptica dubia. Materials and methods: One-month-old nymphs were exposed to magnetic field (MF) for 5 months in three experimental groups: control, exposure to SMF (110 mT) and exposure to ELF MF (50 Hz, 10 mT). Results: The gut masses of the MF groups were significantly lower when compared to control. Superoxide dismutase (SOD) and catalase (CAT) activities were markedly higher than for the control and the differences between the MF groups were statistically significant only for SOD. The applied MF had no effect on total glutathione (GSH) content. Glutathione reductase (GR) and glutathione S-transferase (GST) activities were significantly lower in both MF groups in comparison to the control. There was a significant difference between MF groups for GR activity. Principal Component Analysis (PCA) showed that CAT and GST were the main factors contributing to the differentiation of the control group from the treated experimental groups along PCA 1, and SOD and GR along PCA 2. PCA revealed clear separation between experimental groups depends on antioxidant biomarker response. Conclusion: The applied magnetic fields could be considered a potential stressor influencing gut mass, as well as examined antioxidative biomarkers.
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Affiliation(s)
- Dajana Todorović
- a Department of Insect Physiology and Biochemistry, Institute for Biological Research "Siniša Stanković", University of Belgrade , Belgrade , Serbia
| | - Larisa Ilijin
- a Department of Insect Physiology and Biochemistry, Institute for Biological Research "Siniša Stanković", University of Belgrade , Belgrade , Serbia
| | - Marija Mrdaković
- a Department of Insect Physiology and Biochemistry, Institute for Biological Research "Siniša Stanković", University of Belgrade , Belgrade , Serbia
| | - Milena Vlahović
- a Department of Insect Physiology and Biochemistry, Institute for Biological Research "Siniša Stanković", University of Belgrade , Belgrade , Serbia
| | - Aleksandra Filipović
- a Department of Insect Physiology and Biochemistry, Institute for Biological Research "Siniša Stanković", University of Belgrade , Belgrade , Serbia
| | - Anja Grčić
- a Department of Insect Physiology and Biochemistry, Institute for Biological Research "Siniša Stanković", University of Belgrade , Belgrade , Serbia
| | - Vesna Perić-Mataruga
- a Department of Insect Physiology and Biochemistry, Institute for Biological Research "Siniša Stanković", University of Belgrade , Belgrade , Serbia
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44
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Hore PJ. Upper bound on the biological effects of 50/60 Hz magnetic fields mediated by radical pairs. eLife 2019; 8:44179. [PMID: 30801245 PMCID: PMC6417859 DOI: 10.7554/elife.44179] [Citation(s) in RCA: 23] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/06/2018] [Accepted: 02/02/2019] [Indexed: 01/02/2023] Open
Abstract
Prolonged exposure to weak (~1 μT) extremely-low-frequency (ELF, 50/60 Hz) magnetic fields has been associated with an increased risk of childhood leukaemia. One of the few biophysical mechanisms that might account for this link involves short-lived chemical reaction intermediates known as radical pairs. In this report, we use spin dynamics simulations to derive an upper bound of 10 parts per million on the effect of a 1 μT ELF magnetic field on the yield of a radical pair reaction. By comparing this figure with the corresponding effects of changes in the strength of the Earth’s magnetic field, we conclude that if exposure to such weak 50/60 Hz magnetic fields has any effect on human biology, and results from a radical pair mechanism, then the risk should be no greater than travelling a few kilometres towards or away from the geomagnetic north or south pole.
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Affiliation(s)
- P J Hore
- Department of Chemistry, Physical & Theoretical Chemistry Laboratory, University of Oxford, Oxford, United Kingdom
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45
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Pooam M, Arthaut LD, Burdick D, Link J, Martino CF, Ahmad M. Magnetic sensitivity mediated by the Arabidopsis blue-light receptor cryptochrome occurs during flavin reoxidation in the dark. PLANTA 2019; 249:319-332. [PMID: 30194534 DOI: 10.1007/s00425-018-3002-y] [Citation(s) in RCA: 46] [Impact Index Per Article: 9.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/30/2018] [Accepted: 08/29/2018] [Indexed: 05/20/2023]
Abstract
Arabidopsis cryptochrome mediates responses to magnetic fields that have been applied in the absence of light, consistent with flavin reoxidation as the primary detection mechanism. Cryptochromes are highly conserved blue-light-absorbing flavoproteins which have been linked to the perception of electromagnetic stimuli in numerous organisms. These include sensing the direction of the earth's magnetic field in migratory birds and the intensity of magnetic fields in insects and plants. When exposed to light, cryptochromes undergo flavin reduction/reoxidation redox cycles leading to biological activation which generate radical pairs thought to be the basis for magnetic sensitivity. However, the nature of the magnetically sensitive radical pairs and the steps at which they act during the cryptochrome redox cycle are currently a matter of debate. Here, we investigate the response of Arabidopsis cryptochrome-1 in vivo to a static magnetic field of 500 μT (10 × earth's field) using both plant growth and light-dependent phosphorylation as an assay. Cryptochrome responses to light were enhanced by the magnetic field, as indicated by increased inhibition of hypocotyl elongation and increased cryptochrome phosphorylation. However, when light and dark intervals were given intermittently, a plant response to the magnetic field was observed even when the magnetic field was given exclusively during the dark intervals between light exposures. This indicates that the magnetically sensitive reaction step in the cryptochrome photocycle must occur during flavin reoxidation, and likely involves the formation of reactive oxygen species.
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Affiliation(s)
- Marootpong Pooam
- Sorbonne Universités, CNRS, UMR8256, IBPS, Photobiology Research Group, 7 Quai St. Bernard, 75005, Paris, France
| | - Louis-David Arthaut
- Sorbonne Universités, CNRS, UMR8256, IBPS, Photobiology Research Group, 7 Quai St. Bernard, 75005, Paris, France
| | - Derek Burdick
- Sorbonne Universités, CNRS, UMR8256, IBPS, Photobiology Research Group, 7 Quai St. Bernard, 75005, Paris, France
- Xavier University, 3800 Victory Parkway, Cincinnati, OH, 45207, USA
| | - Justin Link
- Xavier University, 3800 Victory Parkway, Cincinnati, OH, 45207, USA
| | - Carlos F Martino
- Department of Biomedical Engineering, Florida Institute of Technology, 150W University Blvd, Melbourne, FL, 32901, USA
| | - Margaret Ahmad
- Sorbonne Universités, CNRS, UMR8256, IBPS, Photobiology Research Group, 7 Quai St. Bernard, 75005, Paris, France.
- Xavier University, 3800 Victory Parkway, Cincinnati, OH, 45207, USA.
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46
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Sannikova VA, Davydova MP, Sherin PS, Babenko SV, Korolev VV, Stepanov AA, Nikul'shin PV, Kalneus EV, Vasilevsky SF, Benassi E, Melnikov AR. Determination of Hyperfine Coupling Constants of Fluorinated Diphenylacetylene Radical Anions by Magnetic Field-Affected Reaction Yield Spectroscopy. J Phys Chem A 2019; 123:505-516. [PMID: 30566354 DOI: 10.1021/acs.jpca.8b10306] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Magnetic field-affected reaction yield (MARY) spectroscopy is a spin chemistry technique for detecting short-lived radical ions. Having sensitivity to transient species with lifetimes as short as nanoseconds, MARY spectroscopy usually does not provide detailed information on their magnetic resonance parameters, except for simple systems with equivalent magnetic nuclei. In this work, the radical anions of two fluorinated diphenylacetylene derivatives with nonequivalent magnetic nuclei and unknown hyperfine coupling constants ( AHF) were investigated by MARY spectroscopy. The MARY spectra were found to be resolved and have resonance lines in nonzero magnetic fields, which are determined by the AHF values. Simple relationships between the positions of resonance MARY lines and the AHF values were established from the analysis of the different Hamiltonian block contributions to the MARY spectrum. The obtained experimental AHF values are in agreement with the results of quantum chemical calculations at the density functional theory level.
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Affiliation(s)
- Victoria A Sannikova
- Institute of Chemical Kinetics and Combustion SB RAS , 3, Institutskaya Str. , 630090 Novosibirsk , Russian Federation.,Novosibirsk State University , 2, Pirogova Str. , 630090 Novosibirsk , Russian Federation
| | - Maria P Davydova
- Institute of Chemical Kinetics and Combustion SB RAS , 3, Institutskaya Str. , 630090 Novosibirsk , Russian Federation.,A.V. Nikolaev Institute of Inorganic Chemistry SB RAS , 3, Akademika Lavrentieva Ave. , 630090 Novosibirsk , Russian Federation
| | - Peter S Sherin
- Novosibirsk State University , 2, Pirogova Str. , 630090 Novosibirsk , Russian Federation.,International Tomography Center , 3a, Institutskaya Str. , 630090 Novosibirsk , Russian Federation
| | - Simon V Babenko
- Institute of Chemical Kinetics and Combustion SB RAS , 3, Institutskaya Str. , 630090 Novosibirsk , Russian Federation
| | - Valeri V Korolev
- Institute of Chemical Kinetics and Combustion SB RAS , 3, Institutskaya Str. , 630090 Novosibirsk , Russian Federation
| | - Alexander A Stepanov
- Institute of Chemical Kinetics and Combustion SB RAS , 3, Institutskaya Str. , 630090 Novosibirsk , Russian Federation.,Novosibirsk State University , 2, Pirogova Str. , 630090 Novosibirsk , Russian Federation
| | - Pavel V Nikul'shin
- N.N. Vorozhtsov Novosibirsk Institute of Organic Chemistry SB RAS , 9, Akademika Lavrentieva Ave. , 630090 Novosibirsk , Russian Federation
| | - Evgeny V Kalneus
- Institute of Chemical Kinetics and Combustion SB RAS , 3, Institutskaya Str. , 630090 Novosibirsk , Russian Federation
| | - Sergei F Vasilevsky
- Institute of Chemical Kinetics and Combustion SB RAS , 3, Institutskaya Str. , 630090 Novosibirsk , Russian Federation.,Novosibirsk State University , 2, Pirogova Str. , 630090 Novosibirsk , Russian Federation
| | - Enrico Benassi
- Novosibirsk State University , 2, Pirogova Str. , 630090 Novosibirsk , Russian Federation.,Department of Chemistry , Hexi University , 734000 Zhangye , China
| | - Anatoly R Melnikov
- Institute of Chemical Kinetics and Combustion SB RAS , 3, Institutskaya Str. , 630090 Novosibirsk , Russian Federation.,Novosibirsk State University , 2, Pirogova Str. , 630090 Novosibirsk , Russian Federation
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47
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Ikeya N, Nasibulov EA, Ivanov KL, Maeda K, Woodward JR. Single-molecule spectroscopy of radical pairs, a theoretical treatment and experimental considerations. Mol Phys 2018. [DOI: 10.1080/00268976.2018.1559954] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
Affiliation(s)
- Noboru Ikeya
- Graduate School of Arts and Sciences, University of Tokyo, Tokyo, Japan
| | - Egor A. Nasibulov
- International Tomography Center, Siberian Branch of the Russian Academy of Science, Novosibirsk, Russia
- Physics Department, Novosibirsk State University, Novosibirsk, Russia
- A. P. Ershov Institute of Informatics Systems, Siberian Branch of the Russian Academy of Science, Novosibirsk, Russia
| | - Konstantin L. Ivanov
- International Tomography Center, Siberian Branch of the Russian Academy of Science, Novosibirsk, Russia
- Physics Department, Novosibirsk State University, Novosibirsk, Russia
| | - Kiminori Maeda
- Graduate School of Science and Engineering, Saitama University, Saitama City, Japan
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48
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Worster SB, Hore PJ. Proposal to use superparamagnetic nanoparticles to test the role of cryptochrome in magnetoreception. J R Soc Interface 2018; 15:20180587. [PMID: 30381345 PMCID: PMC6228473 DOI: 10.1098/rsif.2018.0587] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/01/2018] [Accepted: 10/08/2018] [Indexed: 11/12/2022] Open
Abstract
Evidence is accumulating to support the hypothesis that some animals use light-induced radical pairs to detect the direction of the Earth's magnetic field. Cryptochrome proteins seem to be involved in the sensory pathway but it is not yet clear if they are the magnetic sensors: they could, instead, play a non-magnetic role as signal transducers downstream of the primary sensor. Here we propose an experiment with the potential to distinguish these functions. The principle is to use superparamagnetic nanoparticles to disable any magnetic sensing role by enhancing the electron spin relaxation of the radicals so as to destroy their spin correlation. We use spin dynamics simulations to show that magnetoferritin, a synthetic, protein-based nanoparticle, has the required properties. If cryptochrome is the primary sensor, then it should be inactivated by a magnetoferritin particle placed 12-16 nm away. This would prevent a bird from using its magnetic compass in behavioural tests and abolish magnetically sensitive neuronal firing in the retina. The key advantage of such an experiment is that any signal transduction role should be completely unaffected by the tiny magnetic interactions (≪kBT) required to enhance the spin relaxation of the radical pair.
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Affiliation(s)
- Susannah Bourne Worster
- Department of Chemistry, University of Oxford, Physical and Theoretical Chemistry Laboratory, South Parks Road, Oxford OX1 3QZ, UK
| | - P J Hore
- Department of Chemistry, University of Oxford, Physical and Theoretical Chemistry Laboratory, South Parks Road, Oxford OX1 3QZ, UK
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49
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Oliva R, Jansen B, Benscheidt F, Sandbichler AM, Egg M. Nuclear magnetic resonance affects the circadian clock and hypoxia-inducible factor isoforms in zebrafish. BIOL RHYTHM RES 2018. [DOI: 10.1080/09291016.2018.1498194] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
Affiliation(s)
- Regina Oliva
- Institute of Zoology, University Innsbruck, Innsbruck, Austria
| | - Bianca Jansen
- Institute of Zoology, University Innsbruck, Innsbruck, Austria
| | | | | | - Margit Egg
- Institute of Zoology, University Innsbruck, Innsbruck, Austria
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50
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Kimø SM, Friis I, Solov'yov IA. Atomistic Insights into Cryptochrome Interprotein Interactions. Biophys J 2018; 115:616-628. [PMID: 30078611 DOI: 10.1016/j.bpj.2018.06.029] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2018] [Revised: 06/11/2018] [Accepted: 06/29/2018] [Indexed: 11/30/2022] Open
Abstract
It is striking that the mechanism by which birds sense geomagnetic fields during the biannual migration seasons is not entirely understood. A protein believed to be responsible for avian magnetoreception is the flavoprotein cryptochrome (CRY), which fulfills many of the criteria for a magnetic field sensor. Some experiments, however, indicate that magnetoreception in birds may be disturbed by extremely weak radio frequency fields, an effect that likely cannot be described by an isolated CRY protein. An explanation can possibly be delivered if CRY binds to another protein inside a cell that would possess certain biochemical properties, and it is, therefore, important to identify possible intracellular CRY interaction partners. The goal of this study is to investigate a possible interaction between CRY4 and the iron-sulfur-containing assembly protein (ISCA1) from Erithacus rubecula (European robin), which has recently been proposed to be relevant for magnetic field sensing. The interaction between the proteins is established through classical molecular dynamics simulations for several possible protein-docking modes. The analysis of these simulations concludes that the ISCA1 complex and CRY4 are capable of binding; however, the peculiarities of this binding argue strongly against ISCA1 as relevant for magnetoreception.
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Affiliation(s)
- Sarafina M Kimø
- Department of Physics, Chemistry and Pharmacy, University of Southern Denmark, Odense M, Denmark
| | - Ida Friis
- Department of Physics, Chemistry and Pharmacy, University of Southern Denmark, Odense M, Denmark
| | - Ilia A Solov'yov
- Department of Physics, Chemistry and Pharmacy, University of Southern Denmark, Odense M, Denmark.
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