Ordering aspects and intramolecular conformation of tetraphenylporphyrins on Ag(111)

Structure and Conformation of Individual Molecules upon Adsorption of a Mixture of Benzoporphyrins on Ag(111), Cu(111), and Cu(110) Surfaces

We investigated the adsorption behavior of a mixture of six 2H-tetrakis-(3, 5-di-tert-butylphenyl)(x)benzoporphyrins (2H-diTTBP(x)BPs, x=0, 1, 2-cis, 2-trans, 3, and 4) on Ag(111), Cu(111) and Cu(110) at room temperature by scanning tunneling microscopy (STM) under ultra-high vacuum conditions. On Ag(111), we observe an ordered two-dimensional square phase, which is stable up to 400 K. On Cu(111), the same square phase coexists with a stripe phase, which disappears at 400 K. In contrast, on Cu(110), 2H-diTTBP(x)BPs adsorb as immobile isolated molecules or dispersed short chains along the [11 ‾ ${\bar{1}}$ 0] substrate direction, which remain intact up to 450 K. The stabilization of the 2D supramolecular structures on Ag(111) and Cu(111), and of the 1D short chains on Cu(110) is attributed to van der Waals interactions between the tert-butyl and phenyl groups of neighboring molecules. From high-resolution STM, we can assign all six 2H-diTTBP(x)BPs within the ordered structures. Moreover, we deduce a crown shape quadratic conformation on Ag(111) and Cu(111), an additional saddle-shape on Cu(111), and an inverted structure and a quadratic appearance on Cu(110). The different conformations are attributed to the different degree of interaction of the iminic nitrogen atoms of the isoindole and pyrrole groups with the substrate atoms.

Solvent Mediated Nanoscale Quasi-Periodic Chirality Reversal in Self-Assembled Molecular Networks Featuring Mirror Twin Boundaries

Grain boundaries in polycrystals have a prominent impact on the properties of a material, therefore stimulating the research on grain boundary engineering. Structure determination of grain boundaries of molecule-based polycrystals with submolecular resolution remains elusive. Reducing the complexity to monolayers has the potential to simplify grain boundary engineering and may offer real-space imaging with submolecular resolution using scanning tunneling microscopy (STM). Herein, the authors report the observation of quasi-periodic nanoscale chirality switching in self-assembled molecular networks, in combination with twinning, as revealed by STM at the liquid/solid interface. The width of the chiral domain structure peaks at 12-19 nm. Adjacent domains having opposite chirality are connected continuously through interdigitated alkoxy chains forming a 1D defect-free domain border, reflecting a mirror twin boundary. Solvent co-adsorption and the inherent conformational adaptability of the alkoxy chains turn out to be crucial factors in shaping grain boundaries. Moreover, the epitaxial interaction with the substrate plays a role in the nanoscale chirality reversal as well.

Conservation of Nickel Ion Single-Active Site Character in a Bottom-Up Constructed π-Conjugated Molecular Network

On-surface chemistry holds the potential for ultimate miniaturization of functional devices. Porphyrins are promising building-blocks in exploring advanced nanoarchitecture concepts. More stable molecular materials of practical interest with improved charge transfer properties can be achieved by covalently interconnecting molecular units. On-surface synthesis allows to construct extended covalent nanostructures at interfaces not conventionally available. Here, we address the synthesis and properties of covalent molecular network composed of interconnected constituents derived from halogenated nickel tetraphenylporphyrin on Au(111). We report that the π-extended two-dimensional material exhibits dispersive electronic features. Concomitantly, the functional Ni cores retain the same single-active site character of their single-molecule counterparts. This opens new pathways when exploiting the high robustness of transition metal cores provided by bottom-up constructed covalent nanomeshes.

Chemically imaging nanostructures formed by the covalent assembly of molecular building blocks on a surface with ultrahigh vacuum tip-enhanced Raman spectroscopy

Surface-bound reactions have become a viable method to develop nanoarchitectures through bottom-up assembly with near atomic precision. However, the bottom-up fabrication of nanostructures on surfaces requires careful consideration of the intrinsic properties of the precursors and substrate as well as the complex interplay of any interactions that arise in the heterogeneous two-dimensional (2D) system. Therefore, it becomes necessary to consider these systems with characterization methods sensitive to such properties with suitable spatial resolution. Here, low temperature ultrahigh vacuum scanning tunneling microscopy (STM) and tip-enhanced Raman spectroscopy (TERS) were used to investigate the formation of 2D covalent networks via coupling reactions of tetra(4-bromophenyl)porphyrin (Br₄TPP) molecules on a Ag(100) substrate. Through the combination of STM topographic imaging and TERS vibrational fingerprints, the conformation of molecular precursors on the substrate was understood. Following the thermally activated coupling reaction, STM and TERS imaging confirm the covalent nature of the 2D networks and suggest that the apparent disorder arises from molecular flexibility.

Structural Transformation of Surface-Confined Porphyrin Networks by Addition of Co Atoms

The self-assembly of a nickel-porphyrin derivative (Ni-DPPyP) containing two pyridyl coordinating sites and two pentyl chains at trans meso positions was studied with scanning tunneling microscopy (STM), X-ray photoelectron spectroscopy (XPS) and low energy electron diffraction (LEED) on Au(111). Deposition of Ni-DPPyP onto Au(111) gave rise to a close-packed network for coverages smaller or equal to one monolayer as revealed by STM and LEED. The molecular arrangement of this two-dimensional network is stabilized via hydrogen bonds formed between the pyridyl's nitrogen and hydrogen atoms from the pyrrole groups of neighboring molecules. Subsequent deposition of cobalt atoms onto the close-packed network and post-deposition annealing at 423 K led to the formation of a Co-coordinated hexagonal porous network. As confirmed by XPS measurements, the porous network is stabilized by metal-ligand interactions between one cobalt atom and three pyridyl ligands, each pyridyl ligand coming from a different Ni-DPPyP molecule.

Ladungsunterstützte Selbstmetallierung von Porphyrinen auf Oxidoberflächen

Das Interesse an Metallierungs‐ und Selbstmetallierungsreaktionen auf Oxidoberflächen ist in jüngster Zeit ständig gewachsen. Der Mechanismus der Selbstmetallierungsreaktion ist jedoch nicht vollständig geklärt. Hier zeigen wir mithilfe von Rastertunnelmikroskopie, Photoemissions‐Spektroskopie und Dichtefunktionaltheorie‐Rechnungen, dass die Selbstmetallierung von 2H‐Tetraphenylporphyrin auf der Oberfläche von ultradünnen MgO(001)‐Filmen durch Ladungstransfer ermöglicht wird. Es wird gezeigt, dass der Ladungszustand und dadurch der Metallierungszustand der Porphyrin‐Moleküle durch die Austrittsarbeit des MgO(001)/Ag(001)‐Substrats gezielt eingestellt werden können.

Charge-Promoted Self-Metalation of Porphyrins on an Oxide Surface

Metalation and self-metalation reactions of porphyrins on oxide surfaces have recently gained interest. The mechanism of porphyrin self-metalation on oxides is, however, far from being understood. Herein, we show by a combination of results obtained with scanning tunneling microscopy, photoemission spectroscopy, and DFT computations, that the self-metalation of 2H-tetraphenylporphyrin on the surface of ultrathin MgO(001) films is promoted by charge transfer. By tuning the work function of the MgO(001)/Ag(001) substrate, we are able to control the charge and the metalation state of the porphyrin molecules on the surface.

Probing the Roughness of Porphyrin Thin Films with X-ray Photoelectron Spectroscopy

Thin-film growth of molecular systems is of interest for many applications, such as for instance organic electronics. In this study, we demonstrate how X-ray photoelectron spectroscopy (XPS) can be used to study the growth behavior of such molecular systems. In XPS, coverages are often calculated assuming a uniform thickness across a surface. This results in an error for rough films, and the magnitude of this error depends on the kinetic energy of the photoelectrons analyzed. We have used this kinetic-energy dependency to estimate the roughnesses of thin porphyrin films grown on rutile TiO2 (110). We used two different molecules: cobalt (II) monocarboxyphenyl-10,15,20-triphenylporphyrin (CoMCTPP), with carboxylic-acid anchor groups, and cobalt (II) tetraphenylporphyrin (CoTPP), without anchor groups. We find CoMCTPP to grow as rough films at room temperature across the studied coverage range, whereas for CoTPP the first two layers remain smooth and even; depositing additional CoTPP results in rough films. Although, XPS is not a common technique for measuring roughness, it is fast and provides information of both roughness and thickness in one measurement.

Fine-tuning of two-dimensional metal-organic nanostructures via alkali-pyridyl coordination

Herein, we report a fine-tuning of the two-dimensional alkali-pyridyl coordination assemblies facilely realized by surface reaction between tetrapyridyl-porphyrin molecules and alkali halides on Ag(111) under a solventless ultrahigh vacuum condition. High-resolution scanning tunneling topography and X-ray photoelectron spectra reveal the formation of alkali-pyridyl coordination and the induced conformational tuning of the porphyrin macrocycle cores. Furthermore, employing other different alkali halide substitutes, we demonstrate a fine-tuning of the metal-organic nanostructures at the sub-Å scale. Postdeposition of Fe onto the as-formed precursor layer yields a two-dimensional bimetallic framework structure, manifesting a functionalization of the metal-organic interfaces.

On-Surface Synthesis of Nonmetal Porphyrins

We report the on-surface synthesis of a nonmetal porphyrin, namely, silicon tetraphenylporphyrin (Si-TPP), by the deposition of atomic silicon onto a free-base TPP layer on a Ag(100) surface under ultrahigh vacuum (UHV) conditions. Scanning tunneling microscopy provides insights into the self-assembly of the TPP molecules before and after Si insertion. Silicon coordinates with all four nitrogen atoms of the TPP macrocycle and interacts with a silver atom of the substrate as confirmed by scanning tunneling spectroscopy, X-ray photoelectron spectroscopy, and complementary density functional theory calculations. The Si-TPP complex presents a saddle-shaped conformation that is stable under STM manipulation. Our study shows how protocols established for the on-surface metalation of tetrapyrroles can be adopted to achieve nonmetal porphyrins. Complementary experiments yielding Si-TPP and Ge-TPP on Ag(111) highlight the applicability to different main group elements and supports. The success of our nonmetal porphyrin synthesis procedure is further corroborated by a temperature-programmed desorption experiment, revealing the desorption of Ge-TPP. This extension of interfacial complex formation beyond metal elements opens promising prospects for new tetrapyrrole architectures with distinct properties and functionalities.

Stability and Exchange Processes in Ionic Liquid/Porphyrin Composite Films on Metal Surfaces

In light of increasing interest in the development of organic-organic multicomponent heterostructures on metals, this molecular-scale study investigates prototypical composite systems of ultrathin porphyrin and ionic liquid (IL) films on metallic supports under well-defined ultrahigh vacuum conditions. By means of angle-resolved X-ray photoelectron spectroscopy, we investigated the adsorption, stability, and thermal exchange of the resulting films after sequential physical vapor deposition of the free-base porphyrin 5,10,15,20-tetraphenylporphyrin, 2H-TPP, and the IL 1-methyl-3-octylimidazolium hexafluorophosphate, [C₈C₁Im][PF₆], on Ag(111) and Au(111). 2H-TPP shows two-dimensional growth of up to two closed molecular layers on Ag(111) and Au(111) and three-dimensional island growth for thicker films. IL films on top of a monolayer of 2H-TPP exhibit Stranski-Krastanov-like growth and are stable up to 385 K. The 2H-TPP layer leads to destabilization of the IL films, compared to the IL in direct contact with the bare metals, by inhibiting the specific adsorption of the ions on the metal surfaces. When the porphyrin is deposited on top of [C₈C₁Im][PF₆] at low temperature, the 2H-TPP molecules adsorb on top of the IL film at first but replace the IL at the IL/metal interfaces upon heating above 240 K. This exchange process is most likely driven by the higher adsorption energy of 2H-TPP on Ag(111) and Au(111) surfaces, as compared to the IL. The behavior observed on Ag(111) and Au(111) is identical. The results are highly relevant for the stability of porphyrin/IL-based thin film catalyst systems and molecular devices, and more generally, stacked organic multilayer architectures.

Coverage-Dependent Structural Transformation of Cyano-Functionalized Porphyrin Networks on Au(111) via Addition of Cobalt Atoms

The self-assembly process of a cobalt-porphyrin derivative (Co-TCNPP) containing cyanophenyl substituents at all four meso positions on Au(111) was studied by means of scanning tunneling microscopy (STM) and low energy electron diffraction (LEED) under ultrahigh vacuum conditions. Deposition of Co-TCNPP onto Au(111) gave rise to the formation of a close-packed H-bonded network, which was independent of coverage as revealed by STM and LEED. However, a coverage-dependent structural transformation took place upon the deposition of Co atoms. At monolayer coverage, a reticulated long-range ordered network exhibiting a distinct fourfold Co coordination was observed. By reduction of the molecular coverage, a second metal-organic coordination network (MOCN) was formed in coexistence with the fourfold Co-coordinated network, that is, a chevron structure stabilized by a simultaneous expression of H-bonding and threefold Co coordination. We attribute the coverage-dependent structural transformation to the in-plane compression pressure exerted by the molecules deposited on the surface. Our study shows that a subtle interplay between the chemical nature of the building blocks (molecules and metallic atoms) and molecular coverage can steer the formation of structurally different porphyrin-based MOCNs.

The effect of translation on the binding energy for transition-metal porphyrines adsorbed on Ag(111) surface

The characteristics of interaction between six transition-metal porphyrines and the Ag(111) surface are detailed here as resulted from DFT calculations. Van der Waals interactions as well as the strong correlation in 3d orbitals of transition metals were taken into account in all calculations, including the structural relaxation. For each system we investigate four relative positions of the metallic atom on top the surface. We show that the interaction between the transition metal and silver is the result of a combination between the dispersion interaction, charge transfer and weak chemical interaction. The detailed analysis of the physical properties, such as dipolar and magnetic moments and the molecule-surface charge transfer, analyzed for different geometric configurations allows us to propose qualitative models, relevant for the understanding of the self-assembly processes and related phenomena.

Intercalating Single-Atom Metal Centers into an Organic Monolayer with a Full-Sample Coverage

Thiolate self-assembled monolayers (SAMs) have been widely used as a straightforward method to functionalize the surface of a common substrate with selective organic functional groups. Here we describe a process that further introduces isolated metal centers into an organic SAM using solutions of metallic porphyrin so that different organic groups and metal single-atoms can be simultaneously exposed on top of the surface. The entire process employs only common laboratory equipment and mild-temperature (<100 °C) incubation to create a full-sample (>cm²) SAM coverage. Each step in this process is closely monitored and discussed using nm-scale scanning tunneling microscopy (STM) images. This work can be straightforwardly adopted by research groups interested in such a diversely customizable surface but without access to a vacuum-based deposition technology. The porphyrin molecules are shown to intercalate among closely packed thiolate SAM domains, and STM characterization shows that the entire mixed monolayer is stable in an ambient condition. This process also does not involve any tip-assisted desorption or lithography procedure and can thus be applied toward substrates of other shapes beyond a flat surface.

Metalation and coordination reactions of 2H-meso-trans-di(p-cyanophenyl)porphyrin on Ag(111) with coadsorbed cobalt atoms

We investigated the metalation and coordination reactions of Co with 2H-5,15-bis(para-cyanophenyl)-10,20-bisphenylporphyrin (2HtransDCNPP) on a Ag(111) surface by scanning tunneling microscopy. At room temperature (RT), 2HtransDCNPPs self-assemble into a supramolecular structure stabilized by intermolecular hydrogen bonding. The metalation of 2HtransDCNPP is achieved either by depositing Co atoms onto the supramolecular structure at RT, or, alternatively, by depositing the molecules onto a submonolayer Co-precovered Ag(111) surface with a subsequent heating to 500 K. In addition, the molecules coordinate to Co atoms through the N atoms in the peripheral cyano groups with a preference of isolated 4-fold coordination motifs at RT.

Translation of metal-phthalocyanines adsorbed on Au(111): from van der Waals interaction to strong electronic correlation

Using first-principles calculations, we investigate the binding energy for six transition metal - phthalocyanine molecules adsorbed on Au(111). We focus on the effect of translation on molecule - surface physical properties; van der Waals interactions as well as the strong correlation in d orbitals of transition metals are taken into account in all calculations. We found that dispersion interaction and charge transfer have the dominant role in the molecule-surface interaction, while the interaction between the transition metal and gold has a rather indirect influence over the physics of the molecule-surface system. A detailed analysis of the physical properties of the adsorbates at different geometric configurations allows us to propose qualitative models to account for all values of interface dipole charge transfer and magnetic moment of metal-phthalocyanines adsorbed on Au(111).

Tuning the Kondo resonance in two-dimensional lattices of cerium molecular complexes

Cerium intermetallics have raised a lot of interest for the past forty years thanks to their very unusual and interesting electronic and magnetic properties. This can be explained by the peculiar electronic configuration of Ce (4f1) that allows different oxidation states leading to singular behavior such as quantum phase transitions, heavy-fermion behavior and the Kondo effect. In this work, we used a mixed-valence molecular analogue to study the Kondo effect down to the atomic scale by means of scanning tunneling microscopy/spectroscopy (STM/STS) for which new many-body effects are expected to emerge due to reduced dimensionality and specific chemical environment of the 4f-ion. For that purpose, double-decker molecular complexes hosting a Ce ion were synthesized and adsorbed onto Ag and Cu (111) surfaces forming two-dimensional lattices. As a result, we observed a zero-bias conductance resonance on Ag only indicative of a Kondo effect arising from the coupling between a molecular spin and the conducting electrons of the metallic surface. The emergence of the Kondo effect is discussed in terms of intermolecular and molecule/substrate interactions. This work expands the little knowledge to date on the structural and related electronic properties of Ce-based molecular systems on surfaces. In particular, it shows that Ce-based double deckers are good platforms to obtain insight into 4f-induced many-body effects down to the nanometer scale and in two-dimensional lattices. Moreover, this outcome has a strong impact for future applications of molecular devices in which both metals are commonly used as electrical contacts.

Adsorption of iron tetraphenylporphyrin on (111) surfaces of coinage metals: a density functional theory study

The adsorption of the iron tetraphenylporphyrin (FeTPP) molecule in its deckchair conformation was investigated on Au(111), Ag(111) and Cu(111) surfaces by performing spin-polarized density functional theory (DFT) calculations taking into account both van der Waals (vdW) interaction and on-site Coulomb repulsion. The deckchair conformation of the molecule favours intermolecular π-π-type interactions in a less densely packed monolayer than the saddle conformation. The activation barrier between the two stable magnetic states (high spin, S = 2 and intermediate spin, S = 1) of the molecule in vacuum disappears upon adsorption on the metal surfaces. The high-spin state of physisorbed FeTPP is stable on all adsorption sites. This result reveals that an external permanent element such as a STM tip or an additional molecule is needed to use FeTPP or similar molecules as model system for molecular spin switches.

Very high temperature tiling of tetraphenylporphyrin on rutile TiO2(110)

We demonstrate the thermal stability up to 450 °C of a titanium(iv)-porphyrin monolayer grown on the rutile TiO₂(110) surface. Starting from a film of metal-free tetra-phenyl-porphyrin, 2HTPP, deposited at room temperature, we show that, beyond the self-metalation reaction at 150°-200 °C, a second phase transition takes place at ∼350 °C. Using surface diffraction and microscopy, we observe a change of the phase symmetry from (2 × 4)-obliq to (2 × 6)-rect. Core level photoemission indicates that the chemical states of both the molecular tetrapyrrolic macrocycle and the substrate are unchanged. X-ray absorption spectroscopy reveals that the driving mechanism is a rotation of the phenyl terminations towards the substrate (flattening) that triggers a conformational change of the molecule through partial cyclo-dehydrogenation. From comparison with first principles calculations, we show that the common feature of these multiple phase transitions is the chemical nature of the porphyrin bonding atop the substrate oxygen rows: the coordination of the macrocycle central pocket to the oxygen atoms beneath is preserved throughout both the self-metalation and flattening reactions. The molecular orientation and arrangement are determined by steric constraints and intermolecular interactions, whereas the specific adsorption site is further stabilized by the interaction of the peripheral C-H network with the adjacent oxygen rows. Porphyrins are thus trapped at the TiO₂(110) surface, where they demonstrate an exceptionally high thermal stability (up to ∼450 °C), which makes this interface potentially useful for sensors and photocatalysis applications in harsh environments.

Organic Multilayer Films Studied by Scanning Tunneling Microscopy

This Minireview focuses exclusively on work with scanning tunneling microscopy to study the self-assembled multilayer films (SAMTs) of organic molecules. The π-conjugated organic molecules form different structures within different monolayers on various substrates. The interplay between molecule-substrate and intermolecular interactions plays a key role in determining the stacking mode of organic multilayer films. Different substrates strongly influence the organic-film growth and electronic properties of the organic molecules. Geometric and electronic structures of SAMTs are important factors that may determine device performance. In addition to the inorganic interface, this Minireview addresses the organic-organic interface. Homo- and hetero-SAMTs of organic molecules are also considered. The subtle interplay between structural and electronic characteristics, on one hand, and functionality and reactivity, on the other hand, are highlighted.

On the critical role of the substrate: the adsorption behaviour of tetrabenzoporphyrins on different metal surfaces

2HTPTBPs assemble into different supramolecular structures on different metal surfaces due to different molecule–substrate (molecule) interactions.

“Inverted” porphyrins: a distorted adsorption geometry of free-base porphyrins on Cu(111)

Peculiar “inverted” intramolecular conformation of a free-base porphyrin due to specific attractive molecule–substrate interaction.

Direct Identification and Determination of Conformational Response in Adsorbed Individual Nonplanar Molecular Species Using Noncontact Atomic Force Microscopy

In recent years atomic force microscopy (AFM) at highest resolution was widely applied to mostly planar molecules, while its application toward exploring species with structural flexibility and a distinct 3D character remains a challenge. Herein, the scope of noncontact AFM is widened by investigating subtle conformational differences occurring in the well-studied reference systems 2H-TPP and Cu-TPP on Cu(111). Different saddle-shape conformations of both species can be recognized in conventional constant-height AFM images. To unambiguously identify the behavior of specific molecular moieties, we extend data acquisition to distances that are inaccessible with constant-height measurements by introducing vertical imaging, that is, AFM mapping in a plane perpendicular to the sample surface. Making use of this novel technique the vertical displacement of the central Cu atom upon tip-induced conformational switching of Cu-TPP is quantified. Further, for 2H-TPP two drastically different geometries are observed, which are systematically characterized. Our results underscore the importance of structural flexibility in adsorbed molecules with large conformational variability and, consequently, the objective to characterize their geometry at the single-molecule level in real space.

Functionalized Porphyrins on an Atomically Defined Oxide Surface: Anchoring and Coverage-Dependent Reorientation of MCTPP on Co3O4(111)

We have studied the adsorption of tetraphenylporphyrin (2HTPP) and its carboxylated counterpart mono-para-carboxyphenyltriphenylporphyrin (MCTPP) on an atomically defined Co3O4(111) film under ultrahigh vacuum (UHV) conditions. Using time-resolved infrared reflection absorption spectroscopy (TR-IRAS), we show that 2HTPP adsorbs molecularly in a flat-lying orientation, whereas MCTPP binds to the surface via formation of a chelating bidentate carboxylate upon deposition at 400 K. Combining TR-IRAS and density-functional theory (DFT), we determine the molecular tilting angle as a function of coverage. We show that the MCTPP adsorption geometry changes from a nearly flat-lying orientation (tilting angle <30°) at low coverage to a nearly perfectly upright-standing orientation (tilting angle of approximately 80°) in the full monolayer.

Surface-confined Ullmann coupling of thiophene substituted porphyrins

The covalent coupling of (5,10,15,20-tetrabromothien-2-ylporphyrinato)zinc(II) (TBrThP) molecules on the Ag(111) surface has been investigated under ultra-high-vacuum conditions, using scanning tunnelling microscopy and x-ray photoelectron spectroscopy. The findings provide atomic-level insight into surface-confined Ullmann coupling of thiophene substituted porphyrins, analyzing the progression of organometallic intermediate to final coupled state. Adsorption of the TBrThP molecules on the Ag(111) surface at room temperature is found to result in the reductive dehalogenation of the bromothienyl substituents and the subsequent formation of single strand and crosslinked coordination networks. The coordinated substrate atoms bridge the proximal thienyl groups of the organometallic intermediate, while the cleaved bromine atoms are bound on the adjacent Ag(111) surface. The intermediate complex displays a thermal lability at ∼423 K that results in the dissociation of the proximal thienyl groups with the concomitant loss of the surface bound bromine. At the thermally induced dissociation of the intermediate complex the resultant thienylporphyrin derivatives covalently couple, leading to the formation of a polymeric network of thiophene linked and meso-meso fused porphyrins.

Surface-Assisted Cyclodehydrogenation; Break the Symmetry, Enhance the Selectivity

Selectivity in chemical reactions is a major objective in industrial processes to minimize spurious byproducts and to save scarce resources. In homogeneous catalysis the most important factor which determines selectivity is structural symmetry. However, a transfer of the symmetry concept to heterogeneous catalysis still requires a detailed comprehension of the underlying processes. Here, we investigate a ring-closing reaction in surface-confined meso-substituted porphyrin molecules by scanning tunneling microscopy, temperature-programmed desorption, and computational modeling. The identification of reaction intermediates enables us to analyze the reaction pathway and to conclude that the symmetry of the porphyrin core is of pivotal importance regarding product yields.

Surface-confined 2D polymerization of a brominated copper-tetraphenylporphyrin on Au(111)

A coupling-limited approach for the Ullmann reaction-like on-surface synthesis of a two-dimensional covalent organic network starting from a halogenated metallo-porphyrin is demonstrated. Copper-octabromo-tetraphenylporphyrin molecules can diffuse and self-assemble when adsorbed on the inert Au(111) surface. Splitting-off of bromine atoms bonded at the macrocyclic core of the porphyrin starts at room temperature after the deposition and is monitored by X-ray photoelectron spectroscopy for different annealing steps. Direct coupling between the reactive carbon sites of the molecules is, however, hindered by the molecular shape. This leads initially to an ordered non-covalently interconnected supramolecular structure. Further heating to 300 °C and an additional hydrogen dissociation step is required to link the molecular macrocycles via a phenyl group and form large ordered polymeric networks. This approach leads to a close-packed covalently bonded network of overall good quality. The structures are characterized using scanning tunneling microscopy. Different kinds of lattice defects and, furthermore, the impact of polymerization on the HOMO-LUMO gap are discussed. Density functional theory calculations corroborate the interpretations and give further insight into the adsorption of the debrominated molecule on the surface and the geometry and coupling reaction of the polymeric structure.

Self-assembly of NiTPP on Cu(111): a transition from disordered 1D wires to 2D chiral domains

The growth mechanism of NiTPP on Cu(111): from disordered 1D wires to self-assembled chiral domains.

Self-assembly and coverage dependent thermally induced conformational changes of Ni(ii)-meso-tetrakis (4-tert-butylphenyl) benzoporphyrin on Cu(111)

Irreversible intramolecular conformation change induced by a coverage-dependent dehydrogenative intramolecular aryl–aryl coupling reaction was observed for Ni-TTBPBP on Cu(111).

Coverage- and temperature-dependent metalation and dehydrogenation of tetraphenylporphyrin on Cu(111)

Using temperature-programmed desorption, supported by X-ray photoelectron spectroscopy and scanning tunneling microscopy, a comprehensive overview of the main reactions of 5,10,15,20-tetraphenyl-21H,23H-porphyrin (2HTPP) on Cu(111) as a function of coverage and temperature is obtained. Three reactions were identified: metalation with Cu substrate atoms, stepwise partial dehydrogenation, and finally complete dehydrogenation. At low coverage the reactions are independent of coverage, but at higher coverage metalation becomes faster and partial dehydrogenation slower. This behavior is explained by a weaker interaction between the iminic nitrogen atoms and the Cu(111) surface in the high-coverage checkerboard structure, leading to faster metalation, and the stabilizing effect of T-type interactions in the CuTPP islands formed at high coverage after metalation, leading to slower dehydrogenation. Based on the amount of hydrogen released and the appearance in STM, a structure of the partially dehydrogenated molecule is suggested.

Homolytic cleavage of molecular oxygen by manganese porphyrins supported on Ag(111)

Oxygen binding and cleavage are important for both molecular recognition and catalysis. Mn-based porphyrins in particular are used as catalysts for the epoxidation of alkenes, and in this study the homolytic cleavage of O2 by a surface-supported monolayer of Mn porphyrins on Ag(111) is demonstrated by scanning tunneling microscopy, X-ray absorption, and X-ray photoemission. As deposited, {5,10,15,20-tetraphenylporphyrinato}Mn(III)Cl (MnClTPP) adopts a saddle conformation with the average plane of its macrocycle parallel to the substrate and the axial Cl ligand pointing upward, away from the substrate. The adsorption of MnClTPP on Ag(111) is accompanied by a reduction of the Mn oxidation state from Mn(III) to Mn(II) due to charge transfer between the substrate and the molecule. Annealing the Mn(II)ClTPP monolayer up to 510 K causes the chlorine ligands to desorb from the porphyrins while leaving the monolayer intact. The Mn(II)TPP is stabilized by the surface acting as an axial ligand for the metal center. Exposure of the Mn(II)TPP/Ag(111) system to molecular oxygen results in the dissociation of O2 and forms pairs of Mn(III)OTPP molecules on the surface. Annealing at 445 K reduces the Mn(III)OTPP complex back to Mn(II)TPP/Ag(111). The activation energies for Cl and O removal were found to be 0.35 ± 0.02 eV and 0.26 ± 0.03 eV, respectively.

Studying the dynamic behaviour of porphyrins as prototype functional molecules by scanning tunnelling microscopy close to room temperature

Scanning tunnelling microscopy of the dynamics of functional molecules (porphyrins) close to room temperature enables a detailed determination of the thermodynamic potentials including entropic contributions of the underlying processes.

Unravelling the molecular structure and packing of a planar molecule by combining nuclear magnetic resonance and scanning tunneling microscopy

The determination of the molecular structure of a porphyrin is achieved by using nuclear magnetic resonance (NMR) and scanning tunneling microscopy (STM) techniques. Since macroscopic crystals cannot be obtained in this system, this combination of techniques is crucial to solve the molecular structure without the need for X-ray crystallography. For this purpose, previous knowledge of the flatness of the reagent molecules (a porphyrin and its functionalizing group, a naphthalimide) and the resulting molecular structure obtained by a force-field simulation are used. The exponents of the I-V curves obtained by scanning tunneling spectroscopy (STS) allow us to check whether the thickness of the film of molecules is greater than a monolayer, even when there is no direct access to the exposed surface of the metal substrate. Photoluminescence (PL), optical absorption, infrared (IR) reflectance and solubility tests are used to confirm the results obtained here with this NMR/STM/STS combination.

Electron beam induced surface activation of ultrathin porphyrin layers on Ag(111)

We demonstrate how a focused electron beam can be used to chemically activate porphyrin layers on Ag(111) such that they become locally reactive toward the decomposition of iron pentacarbonyl, Fe(CO)5. This finding considerably expands the scope of electron beam induced surface activation (EBISA) and also has implications for electron beam induced deposition (EBID). The influence of the porphyrin layer thickness on both processes is studied in detail using scanning tunneling microscopy (STM) and scanning electron microscopy (SEM) as well as Auger electron spectroscopy (AES) and scanning Auger microscopy (SAM). While a closed monolayer of porphyrin molecules does exhibit some activity toward Fe(CO)5 decomposition after electron irradiation, a growth enhancement is found for bi- and multilayer films. This is attributed to a partial quenching of activated centers in the first layer due to the close proximity of the silver substrate. In addition, we demonstrate that the catalytic decomposition of gaseous Fe(CO)5 on Ag(111) can be effectively inhibited by introducing a densely packed monolayer of 2H-tetraphenylporphyrin (2HTPP) molecules.

Self-organization of two-dimensional poly(3-hexylthiophene) crystals on Au(111) surfaces

A novel approach to construct organized structures and tunable electronic properties of poly(3-hexylthiophene) (P3HT) monolayers on Au(111) surfaces was developed based on a self-assembly process in a liquid phase. On a bare Au(111) surface, P3HT adsorbs as a monolayer with a randomly oriented and curvy-wire morphology. When the gold surface was pre-modified by an iodine adlayer (I-Au(111)), the passivation effect of iodine decreases the substrate-adsorbate interaction. As a result, P3HT adsorbs as linear chains, stacking and folding into regular arrays of a polymer bundle. By controlling the electrode at more negative potentials, it is able to desorb the iodine adlayer from the substrate. The remaining P3HT adsorbs onto the Au(111) surface directly, retaining a linear and regular arrangement. However, a different electronic structure is imaged by scanning tunneling microscopy (STM). The scanning tunneling spectroscopy (STS) analysis reveals that this molecular image is associated with a 0.16 eV shift of the Fermi level toward HOMO position, indicating a stronger p-doping characteristic of the adlayer. The phenomenon is ascribed to an iodine-induced p-doping reaction which occurs during the desorption of iodine. This work demonstrates that electrode potential and pre-adsorbed halide adlayers can be effectively used to regulate the arrangement and electronic properties of adsorbed molecules on metallic substrates.

Effect of geometrical orientation on the charge-transfer energetics of supramolecular (tetraphenyl)-porphyrin∕C60 dyads

The charge transfer (CT) excited state energies of donor-acceptor (D∕A) pairs determine the achievable open-circuit voltage of D∕A-based organic solar cell devices. Changes in the relative orientation of donor-acceptor pairs at the interface influence the frontier orbital energy levels, which impacts the dissociation of bound excitons at the D∕A-interface. We examine the effect of relative orientation on CT excited state energies of porphyrin-fullerene dyads. The donors studied are base- and Zn-tetraphenyl porphyrin coupled to C60 as the acceptor molecule in an end-on configuration. We compare the energetics of a few low-lying CT states for the end-on geometry to our previously calculated CT energetics of a co-facial orientation. The calculated CT excitation energies are larger for the end-on orientation in comparison to the co-facial structure by about 0.7 eV, which primarily occurs due to a decrease in exciton binding energy in going from the co-facial to the end-on orientation. Furthermore, changes in relative donor-acceptor orientation have a larger impact on the CT energies than changes in donor-acceptor distance.

Coverage dependent disorder-order transition of 2H-tetraphenylporphyrin on Cu(111)

In this study, we investigate the peculiar coverage dependent supramolecular arrangement of 2H-tetraphenylporhpyrin (2HTPP) on Cu(111) with scanning tunneling microscopy at room-temperature. At low coverage, "slow" diffusion of individual 2HTPP molecules along the close-packed atomic rows of the substrate is observed, and no supramolecular ordering occurs. However, at higher coverage, the formation of ordered, checkerboard-like domains is found, with two molecules per unit cell at different distances from the surface. This behavior is attributed to a complex interplay of site specific molecule-substrate interaction, mainly the strong interaction between the iminic N atoms and Cu substrate atoms, with intermolecular T-type and π-π interactions.

Towards the engineering of molecular nanostructures: local anchoring and functionalization of porphyrins on model-templates

We demonstrate that Cu(111) surfaces pre-covered with a submonolayer of copper oxide or metallic nickel are suitable model-templates for the selective adsorption and/or localized functionalization of functional molecules such as different free base porphyrins and metalloporphyrins. The oxide/Cu(111) model-template is able to steer the adsorption of tetraphenylporphyrins (TPP): 2HTPP selectively adsorbs on the bare Cu areas, and for CoTPP anchoring at the rim of the copper oxide islands is found. On the Ni/Cu(111) model-template TPP molecules are pinned on the Ni areas while they are mobile on the bare Cu surface. Interestingly, adsorption of free base octaethylporphyrin on Ni/Cu(111) leads to a local functionalization, namely the metalation to NiOEP on the Ni areas. Model-template preparation and characterization by scanning tunneling microscopy is performed at room temperature.