1
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Tu Z, Li J, Yang M, Chen Y, Wang Y, Song H. Accurate ab initio based potential energy surface and kinetics of the Cl + NH3 → HCl + NH2 reaction. J Chem Phys 2024; 161:034304. [PMID: 39007384 DOI: 10.1063/5.0216562] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2024] [Accepted: 07/01/2024] [Indexed: 07/16/2024] Open
Abstract
The gas-phase reaction Cl + NH3 → HCl + NH2 is a prototypical hydrogen abstraction reaction, whose minimum energy path involves several intermediate complexes. In this work, a full-dimensional, spin-orbit corrected potential energy surface (SOC PES) is constructed for the ground electronic state of the Cl + NH3 reaction. About 52 000 energy points are sampled and calculated at the UCCSD(T)-F12a/aug-cc-pVTZ level, in which the data points located in the entrance channel are spin-orbit corrected. The spin-orbit corrections are predicted by a fitted three-dimensional energy surface from about 7520 energy points in the entrance channel at the level of CASSCF (15e, 11o)/aug-cc-pVTZ. The fundamental-invariant neural network method is utilized to fit the SOC PES, resulting in a total root mean square error of 0.12 kcal mol-1. The calculated thermal rate constants of the Cl + NH3 → HCl + NH2 reaction on the SOC PES with the soft-zero-point energy constraint agree reasonably well with the available experimental values.
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Affiliation(s)
- Zhao Tu
- School of Chemical and Environmental Engineering, Hubei Minzu University, Enshi 445000, China
- State Key Laboratory of Magnetic Resonance Spectroscopy and Imaging, Innovation Academy for Precision Measurement Science and Technology, Chinese Academy of Sciences, Wuhan 430071, China
| | - Jiaqi Li
- State Key Laboratory of Magnetic Resonance Spectroscopy and Imaging, Innovation Academy for Precision Measurement Science and Technology, Chinese Academy of Sciences, Wuhan 430071, China
- College of Physical Science and Technology, Huazhong Normal University, Wuhan 430079, China
| | - Mingjuan Yang
- State Key Laboratory of Magnetic Resonance Spectroscopy and Imaging, Innovation Academy for Precision Measurement Science and Technology, Chinese Academy of Sciences, Wuhan 430071, China
| | - Yizhuo Chen
- State Key Laboratory of Magnetic Resonance Spectroscopy and Imaging, Innovation Academy for Precision Measurement Science and Technology, Chinese Academy of Sciences, Wuhan 430071, China
- College of Physical Science and Technology, Huazhong Normal University, Wuhan 430079, China
| | - Yan Wang
- School of Chemical and Environmental Engineering, Hubei Minzu University, Enshi 445000, China
| | - Hongwei Song
- State Key Laboratory of Magnetic Resonance Spectroscopy and Imaging, Innovation Academy for Precision Measurement Science and Technology, Chinese Academy of Sciences, Wuhan 430071, China
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2
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Zhao H, Sun Z. Higher-Order Split Operator Schemes for Solving Tetratomic Reactions Using the Time-Dependent Wave Packet Method. J Phys Chem A 2024; 128:4911-4922. [PMID: 38847623 DOI: 10.1021/acs.jpca.4c01802] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/21/2024]
Abstract
In this work, using the time-dependent quantum wave packet method, quite a few typical higher-order split operators (HOSOs) were for the first time applied to calculate the tetratomic reactive scattering processes in the hyperspherical coordinate. It was found that the HOSOs were hardly efficient for a tetratomic reaction calculation, unlike those for a triatomic reactive scattering calculation. We proposed an efficient HOSO with a force gradient (denoted as 2G1 in the main text) for efficiently and accurately calculating a tetratomic reaction using the quantum wave packet method. Several typical tetratomic reactions, such as H2 + OH, HF + OH, and H2 + OH+, are calculated for demonstrating the effectiveness of the proposed 2G1 in terms of (product state-resolved) reaction probability and inelastic probability, by comparing with the performance of the previously reported various HOSOs. We suggest that the 2G1 propagator could be applied to efficiently calculate a general tetratomic reaction.
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Affiliation(s)
- Hailin Zhao
- Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, P.R. China
| | - Zhigang Sun
- Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, P.R. China
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3
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Rai PK, Kumar P. Accurate determination of reaction energetics and kinetics of the HO 2˙ + O 3 → OH˙ + 2O 2 reaction. Phys Chem Chem Phys 2023; 25:8153-8160. [PMID: 36877131 DOI: 10.1039/d3cp00135k] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/16/2023]
Abstract
In the present work, we have studied the HO2˙ + O3 → HO˙ + 2O2 reaction using chemical kinetics and quantum chemical calculations. We have employed the post-CCSD(T) method to estimate the barrier height and reaction energy for the title reaction. In the post-CCSD(T) method, we have included zero point energy corrections, contributions from full triple excitations and partial quadratic excitations at the coupled-cluster level, and core corrections. We have also computed the reaction rate in the temperature range of 197-450 K and found good agreement with all the available experimental results. In addition, we have also fitted the computed rate constants with the Arrhenius expression and obtained an activation energy of 1.0 ± 0.1 kcal mol-1, almost identical to the value recommended by IUPAC and JPL.
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Affiliation(s)
- Philips Kumar Rai
- Department of Chemistry, Malaviya National Institute of Technology Jaipur, Jaipur, 302017, India.
| | - Pradeep Kumar
- Department of Chemistry, Malaviya National Institute of Technology Jaipur, Jaipur, 302017, India.
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4
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Zhang X, Tian X, Li J, Li M, Gao T, Zou S, Chen J, Xu X, Gou Q, Grabow JU. Insights into the Diels-Alder Reaction of Furan with Maleic Anhydride from Its Prereactive Intermediate. J Phys Chem Lett 2023; 14:604-608. [PMID: 36633594 DOI: 10.1021/acs.jpclett.2c03560] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/17/2023]
Abstract
The prereactive intermediate in the furan-maleic anhydride cycloaddition, a classical Diels-Alder reaction, has been captured and characterized in pulsed jets by Fourier transform microwave spectroscopy for the first time. The observed species is stabilized by the π-π* interaction between the two moieties, which connects to the endo channel of the cycloaddition. The secondary interactions between the C=C and C=O in the observed isomer are accountable for its lower energy with respect to the one with the exo channel. The present study tries to fill the significant void of the experimental information on prereactive intermediates as the first stage of Diels-Alder cycloadditions, by outlining the stability of the prereactive intermediate and its accurate molecular structure and by emphasizing the role of the π-π* interaction in governing the stereochemical outcome of the reaction.
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Affiliation(s)
- Xinyue Zhang
- Department of Chemistry, School of Chemistry and Chemical Engineering, Chongqing University, Chongqing 401331, China
| | - Xiao Tian
- Department of Chemistry, School of Chemistry and Chemical Engineering, Chongqing University, Chongqing 401331, China
| | - Jiayi Li
- Department of Chemistry, School of Chemistry and Chemical Engineering, Chongqing University, Chongqing 401331, China
| | - Meng Li
- Institut für Physikalische Chemie & Elektrochemie, Leibniz Universität Hannover, 30167 Hannover, Germany
| | - Tianyue Gao
- Department of Chemistry, School of Chemistry and Chemical Engineering, Chongqing University, Chongqing 401331, China
| | - Siyu Zou
- Department of Chemistry, School of Chemistry and Chemical Engineering, Chongqing University, Chongqing 401331, China
| | - Junhua Chen
- School of Pharmacy, Guizhou Medical University, Guiyang 550025, Guizhou, China
| | - Xuefang Xu
- Department of Chemistry, School of Chemistry and Chemical Engineering, Chongqing University, Chongqing 401331, China
| | - Qian Gou
- Department of Chemistry, School of Chemistry and Chemical Engineering, Chongqing University, Chongqing 401331, China
| | - Jens-Uwe Grabow
- Institut für Physikalische Chemie & Elektrochemie, Leibniz Universität Hannover, 30167 Hannover, Germany
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5
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Theoretical Description of Water from Single-Molecule to Condensed Phase: a Review of Recent Progress on Potential Energy Surfaces and Molecular Dynamics. CHINESE J CHEM PHYS 2022. [DOI: 10.1063/1674-0068/cjcp2201005] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]
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6
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Mallick S, Kumar P. Effect of microsolvation on the mode specificity of the OH˙(H 2O) + HCl reaction. Phys Chem Chem Phys 2021; 23:25246-25255. [PMID: 34734608 DOI: 10.1039/d1cp01300a] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The present study investigates the mode specificity in the microsolvated OH˙(H2O) + HCl reaction using on-the-fly direct dynamics simulation. To the best of our knowledge, this is the first study which aims to gain insights into the effect of microsolvation on the mode selectivity. Our investigation reveals that, similar to the gas phase OH˙ + HCl reaction, the microsolvated reaction is also predominantly affected by the vibrational excitation of the HCl mode, whereas the OH vibrational mode behaves as a spectator. Interestingly, in contrast to the behavior of the bare reaction, the integral cross section at the ground state of the microsolvated reaction decreases with an increase in translational energy. However, for the vibrational excited states, the reactivity of the microsolvated reaction is found to be higher than that of the bare reaction within the selected range of translational energies.
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Affiliation(s)
- Subhasish Mallick
- Department of Chemistry, Malaviya National Institute of Technology Jaipur, Jaipur, 302017, India.
| | - Pradeep Kumar
- Department of Chemistry, Malaviya National Institute of Technology Jaipur, Jaipur, 302017, India.
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7
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Csorba B, Szabó P, Góger S, Lendvay G. The Role of Zero-Point Vibration and Reactant Attraction in Exothermic Bimolecular Reactions with Submerged Potential Barriers: Theoretical Studies of the R + HBr → RH + Br (R = CH 3, HO) Systems. J Phys Chem A 2021; 125:8386-8396. [PMID: 34543008 PMCID: PMC8488937 DOI: 10.1021/acs.jpca.1c05839] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
Abstract
The dynamics of the reactions CH3 + HBr → CH4 + Br and HO + HBr → H2O + Br have been studied using the quasiclassical trajectory method to explore the interplay of the vibrational excitation of the breaking bond and the potential energy surface characterized by a prereaction van der Waals well and a submerged barrier to reaction. The attraction between the reactants is favorable for the reaction, because it brings together the reactants without any energy investment. The reaction can be thought to be controlled by capture. The trajectory calculations indeed provide excitation functions typical to capture: the reaction cross sections diverge when the collision energy is reduced toward zero. Excitation of reactant vibration accelerates both reactions. The barrier on the potential surface is so early that the coupling between the degrees of freedom at the saddle point geometry is negligible. However, the trajectory calculations show that when the breaking bond is stretched at the time of the encounter, an attractive force arises, as if the radical approached a HBr molecule whose bond is partially broken. As a result, the dynamics of the reaction are controlled more by the temporary "dynamical", vibrationally induced than by the "static" van der Waals attraction even when the reactants are in vibrational ground state. The cross sections are shown to drop to very small values when the amplitude of the breaking bond's vibration is artificially reduced, which provides an estimate of the reactivity due to the "static" attraction. Without zero-point vibration these reactions would be very slow, which is a manifestation of a unique quantum effect. Reactions where the reactivity is determined by dynamical factors such as the vibrationally enhanced attraction are found to be beyond the range of applicability of Polanyi's rules.
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Affiliation(s)
- Benjámin Csorba
- Institute of Materials and Environmental Chemistry, Research Centre for Natural Sciences, Magyar tudósok krt. 2., H-1117 Budapest, Hungary
| | - Péter Szabó
- Institute of Materials and Environmental Chemistry, Research Centre for Natural Sciences, Magyar tudósok krt. 2., H-1117 Budapest, Hungary
| | - Szabolcs Góger
- Institute of Materials and Environmental Chemistry, Research Centre for Natural Sciences, Magyar tudósok krt. 2., H-1117 Budapest, Hungary
| | - György Lendvay
- Institute of Materials and Environmental Chemistry, Research Centre for Natural Sciences, Magyar tudósok krt. 2., H-1117 Budapest, Hungary.,Center for Natural Sciences, Faculty of Engineering, University of Pannonia, Egyetem u. 10. Veszprém, 8200 Hungary
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8
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Liu S, Zhang X, Chen J, Zhang DH. Feshbach Resonances in the Vibrationally Excited F + HOD( vOH/ vOD = 1) Reaction Due to Chemical Bond Softening. J Phys Chem Lett 2021; 12:6090-6094. [PMID: 34170706 DOI: 10.1021/acs.jpclett.1c01586] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
Abstract
Experiments and theories showed the ground-state reaction F + H2O → HF + OH possesses Feshbach resonances trapped in the hydrogen bond well in the product region. However, it is not clear whether F + H2O and its isotopic analogues have the same Feshbach resonances caused by chemical bond softening as those in the F + H2/HD. Here, we reported state-to-state quantum dynamics studies of the F + HOD(vOH = 1) → HF + OD and F + HOD(vOD = 1) → DF + OH reactions on an accurate neural network potential energy surface. Detailed analysis reveals that the course of the title reactions is dominated by the Feshbach resonance states trapped in the peculiar HF(v'=3)-OD/DF(v'=4)-OH vibrationally adiabatic potential well created by the HF/DF bond softening, which can only be accessed via the HOD(vOH = 1)/HOD(vOD = 1) reaction pathway. Therefore, we confirm the wide existence of chemical bond softening resonances in reactions involving vibrationally excited molecules.
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Affiliation(s)
- Shu Liu
- State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, China
| | - Xiaoren Zhang
- State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Jun Chen
- State Key Laboratory of Structural Chemistry, Fujian Institute of Research on the Structure of Matter, Chinese Academy of Sciences, Fuzhou 350002, China
| | - Dong H Zhang
- State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, China
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9
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Zhang X, Chen J, Xu X, Liu S, Zhang DH. A neural network potential energy surface for the F + H2O ↔ HF + OH reaction and quantum dynamics study of the isotopic effect. Phys Chem Chem Phys 2021; 23:8809-8816. [DOI: 10.1039/d1cp00641j] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
We report here a global and full dimensional neural network potential energy surface for the F + CH4 reaction and investigate the isotopic effect on the total reaction probabilities using the time-dependent wave packet method.
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Affiliation(s)
- Xiaoren Zhang
- State Key Laboratory of Molecular Reaction Dynamics
- Dalian Institute of Chemical Physics
- Chinese Academy of Sciences
- Dalian 116023
- P. R. China
| | - Jun Chen
- State Key Laboratory of Structural Chemistry
- Fujian Institute of Research on the Structure of Matter
- Chinese Academy of Sciences
- Fuzhou 350002
- P. R. China
| | - Xin Xu
- State Key Laboratory of Molecular Reaction Dynamics
- Dalian Institute of Chemical Physics
- Chinese Academy of Sciences
- Dalian 116023
- P. R. China
| | - Shu Liu
- State Key Laboratory of Molecular Reaction Dynamics
- Dalian Institute of Chemical Physics
- Chinese Academy of Sciences
- Dalian 116023
- P. R. China
| | - Dong H. Zhang
- State Key Laboratory of Molecular Reaction Dynamics
- Dalian Institute of Chemical Physics
- Chinese Academy of Sciences
- Dalian 116023
- P. R. China
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10
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Xin R, Pan M, Song H, Yang M. Mode- and Bond-Selected Reaction of H with Local Mode Molecule HDS. J Phys Chem A 2020; 124:10162-10170. [PMID: 33252233 DOI: 10.1021/acs.jpca.0c09415] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Understanding mode- and bond-selected dynamics of elementary chemical reactions is of central importance in molecular reaction dynamics. The initial state-selected time-dependent wave packet method is employed to study the mode and bond selectivity, isotopic branching ratio, and temperature dependence of rate constants of the two-channel reaction of H with local mode molecule HDS. For the abstraction channel, fundamental excitation of the HS (DS) bond of the reactant HDS significantly enhances the H-abstraction (D-abstraction) reaction, whose efficacy is higher than the same amount of translational energy except at low energies just above the energy threshold. This is in sharp contrast to the prediction of Polanyi rules: translational energy is more efficient than vibrational energy in enhancing a reaction with an early barrier. The recent sudden vector projection model is then applied to rationalize the observed mode specificity, which, however, shows that the translational mode vector has a larger coupling with the reaction coordinate than the stretching vector of the active bond, implying a reversed relative efficacy on promoting the reaction as well. In contrast, the mode and bond specificity for the exchange channel is not as strong as for the abstraction channel due to the regulation of the shallow well along the reaction path.
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Affiliation(s)
- Rong Xin
- State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, Wuhan Institute of Physics and Mathematics, Innovation Academy for Precision Measurement Science and Technology, Chinese Academy of Sciences, Wuhan 430071, China.,College of Physical Science and Technology, Huazhong Normal University, Wuhan 430079, China
| | - Mengyi Pan
- State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, Wuhan Institute of Physics and Mathematics, Innovation Academy for Precision Measurement Science and Technology, Chinese Academy of Sciences, Wuhan 430071, China.,College of Physical Science and Technology, Huazhong Normal University, Wuhan 430079, China
| | - Hongwei Song
- State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, Wuhan Institute of Physics and Mathematics, Innovation Academy for Precision Measurement Science and Technology, Chinese Academy of Sciences, Wuhan 430071, China
| | - Minghui Yang
- State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, Wuhan Institute of Physics and Mathematics, Innovation Academy for Precision Measurement Science and Technology, Chinese Academy of Sciences, Wuhan 430071, China
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11
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Abstract
Transiently trapped quantum states along the reaction coordinate in the transition-state region of a chemical reaction are normally called Feshbach resonances or dynamical resonances. Feshbach resonances trapped in the HF-OH interaction well have been discovered in an earlier photodetchment study of FH2O-; however, it is not clear whether these resonances are accessible by the F + H2O reaction. Here we report an accurate state-to-state quantum dynamics study of the F + H2O → HF + OH reaction on an accurate newly constructed potential energy surface. Pronounced oscillatory structures are observed in the total reaction probabilities, in particular at collision energies below 0.2 eV. Detailed analysis reveals that these oscillating structures originate from the Feshbach resonance states trapped in the hydrogen bond well on the HF(v' = 2)-OH vibrationally adiabatic potentials, producing mainly HF(v' = 1) product. Therefore, the resonances observed in the photodetchment study of FH2O- are accessible to the reaction.
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12
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Lu D, Li J, Guo H. Stereodynamical control of product branching in multi-channel barrierless hydrogen abstraction of CH 3OH by F. Chem Sci 2019; 10:7994-8001. [PMID: 31853354 PMCID: PMC6836967 DOI: 10.1039/c9sc02445j] [Citation(s) in RCA: 21] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/17/2019] [Accepted: 07/08/2019] [Indexed: 11/21/2022] Open
Abstract
Comprehensive dynamical simulations of a prototypical multi-channel reaction on a globally accurate potential energy surface show that the non-statistical product branching is dictated by unique stereodynamics in the entrance channels.
Hydrogen abstraction from methanol (CH3OH) by F atoms presents an ideal proving ground to investigate dynamics of multi-channel reactions, because two types of hydrogen can be abstracted from the methanol molecule leading to the HF + CH3O and HF + CH2OH products. Using the quasi-classical trajectory approach on a globally accurate potential energy surface based on high-level ab initio calculations, this work reports a comprehensive dynamical investigation of this multi-channel reaction, yielding measurable attributes including integral and differential cross sections, as well as branching ratios. It is shown that while complex-forming and direct mechanisms coexist at low collision energies, these barrierless reaction channels are dominated at high energies by the direct mechanism, in which the reaction is only possible for trajectories entering into the respective dynamical cones of acceptance. Perhaps more importantly, the non-statistical product branching is found to be dictated by unique stereodynamics in the entrance channels.
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Affiliation(s)
- Dandan Lu
- School of Chemistry and Chemical Engineering , Chongqing University , Chongqing 401331 , China .
| | - Jun Li
- School of Chemistry and Chemical Engineering , Chongqing University , Chongqing 401331 , China .
| | - Hua Guo
- Department of Chemistry and Chemical Biology , University of New Mexico , Albuquerque , New Mexico 87131 , USA .
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13
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Li J. Ring-polymer molecular dynamics studies of thermal rate coefficients for reaction F + H2O → HF + OH. CHINESE J CHEM PHYS 2019. [DOI: 10.1063/1674-0068/cjcp1808186] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]
Affiliation(s)
- Jun Li
- School of Chemistry and Chemical Engineering, Chongqing University, Chongqing 400044, China
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14
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Affiliation(s)
- Jian-wei Cao
- Beijing National Laboratory for Molecular Sciences, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China
| | - Feng-yi Li
- Beijing National Laboratory for Molecular Sciences, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Wen-sha Xia
- Beijing National Laboratory for Molecular Sciences, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Wen-sheng Bian
- Beijing National Laboratory for Molecular Sciences, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China
- University of Chinese Academy of Sciences, Beijing 100049, China
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15
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Pastorczak E, Pernal K. Molecular interactions in electron-groups embedding generalized valence bond picture. Theor Chem Acc 2018. [DOI: 10.1007/s00214-018-2378-x] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
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16
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Coutinho ND, Sanches-Neto FO, Carvalho-Silva VH, de Oliveira HCB, Ribeiro LA, Aquilanti V. Kinetics of the OH+HCl→H 2 O+Cl reaction: Rate determining roles of stereodynamics and roaming and of quantum tunneling. J Comput Chem 2018; 39:2508-2516. [PMID: 30365178 DOI: 10.1002/jcc.25597] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2018] [Revised: 08/15/2018] [Accepted: 08/20/2018] [Indexed: 02/03/2023]
Abstract
The OH + HCl → H2 O + Cl reaction is one of the most studied four-body systems, extensively investigated by both experimental and theoretical approaches. Here, as a continuation of our previous work on the OH + HBr and OH + HI reactions, which manifest an anti-Arrhenius behavior that was explained by stereodynamic and roaming effects, we extend the strategy to understand the transition to the sub-Arrhenius behavior occurring for the HCl case. As previously, we perform first-principles on-the-fly Born-Oppenheimer molecular dynamics calculations, thermalized at four temperatures (50, 200, 350, and 500 K), but this time we also apply a high-level transition-state-theory, modified to account for tunneling conditions. We find that the theoretical rate constants calculated with Bell tunneling corrections are in good agreement with extensive experimental data available for this reaction in the ample temperature range: (i) simulations show that the roles of molecular orientation in promoting this reaction and of roaming in finding the favorable path are minor than in the HBr and HI cases, and (ii) dominating is the effect of quantum mechanical penetration through the energy barrier along the reaction path on the potential energy surface. The discussion of these results provides clarification of the origin on different non-Arrhenius mechanisms observed along this series of reactions. © 2018 Wiley Periodicals, Inc.
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Affiliation(s)
- Nayara D Coutinho
- Instituto de Química, Universidade de Brasília, Caixa Postal 4478, 70904-970, Brasília, Brazil
| | - Flavio O Sanches-Neto
- Grupo de Química Teórica e Estrutural de Anápolis, Ciências Exatas e Tecnológicas, Universidade Estadual de Goiás, CP 459, 75001-970, Anápolis, GO, Brazil
| | | | - Heibbe C B de Oliveira
- Instituto de Química, Universidade de Brasília, Caixa Postal 4478, 70904-970, Brasília, Brazil
| | - Luiz A Ribeiro
- Institute of Physics, University of Brasilia, Brasilia, 70910-900, Brazil
| | - Vincenzo Aquilanti
- Dipartimento di Chimica, Biologia e Biotecnologie, Università di Perugia, Via Elce di Sotto 8, 06123, Perugia, Italy.,Istituto di Struttura della Materia, Consiglio Nazionale delle Ricerche, Area dela Ricerca di Roma Tor Vergata, Via del Fosso del Cavaliere, 00133, Rome, Italy
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17
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Song H, Yang M. Understanding mode-specific dynamics in the local mode representation. Phys Chem Chem Phys 2018; 20:19647-19655. [PMID: 30014087 DOI: 10.1039/c8cp03240h] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Mode specificity is a main characteristic of transition state control of reaction dynamics. The normal mode representation has been widely employed to describe the mode specificity in elementary chemical reactions. However, spectroscopists have demonstrated that the local mode representation has advantages in analyzing the overtone and combination band spectra. In this work, the mode-specific reaction dynamics between the hydrogen atom and the molecules H2S and H2O is studied using a full-dimensional quantum scattering model in the (2 + 1) Radau-Jacobi coordinates. The mode specificities in the reactions that violates our physical intuition in the normal mode representation are well rationalized in the local mode representation. The energy flow between different XH bonds resulting from the intramolecular interaction and/or intermolecular interaction is unveiled, together with its impacts on dynamics of the abstraction and exchange reactions.
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Affiliation(s)
- Hongwei Song
- State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, Wuhan Institute of Physics and Mathematics, Chinese Academy of Sciences, Wuhan 430071, China.
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18
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Liu A, Xie C, Li J. Quasi-classical dynamics investigations of the F + D 2 O → DF + OD reaction on a full dimensional accurate potential energy surface. COMPUT THEOR CHEM 2018. [DOI: 10.1016/j.comptc.2018.03.002] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
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19
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Clary DC. Spiers Memorial Lecture : Introductory lecture: quantum dynamics of chemical reactions. Faraday Discuss 2018; 212:9-32. [DOI: 10.1039/c8fd00131f] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
This Spiers Memorial Lecture discusses quantum effects that can be calculated and observed in the chemical reactions of small molecules.
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Affiliation(s)
- David C. Clary
- Physical and Theoretical Chemistry Laboratory
- Department of Chemistry
- University of Oxford
- Oxford
- UK
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20
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Ray AW, Ma J, Otto R, Li J, Guo H, Continetti RE. Effects of vibrational excitation on the F + H 2O → HF + OH reaction: dissociative photodetachment of overtone-excited [F-H-OH] . Chem Sci 2017; 8:7821-7833. [PMID: 29163919 PMCID: PMC5674243 DOI: 10.1039/c7sc03364h] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/02/2017] [Accepted: 09/23/2017] [Indexed: 11/21/2022] Open
Abstract
Photodetaching vibrationally excited FH2O– channels energy into the reaction coordinate of the F + H2O reaction, as shown in this joint experimental-theoretical study.
The reaction F + H2O → HF + OH is a four-atom system that provides an important benchmark for reaction dynamics. Hydrogen atom transfer at the transition state for this reaction is expected to exhibit a strong dependence on reactant vibrational excitation. In the present study, the vibrational effects are examined by photodetachment of vibrationally excited F–(H2O) precursor anions using photoelectron-photofragment coincidence (PPC) spectroscopy and compared with full six-dimensional quantum dynamical calculations on ab initio potential energy surfaces. Prior to photodetachment at hνUV = 4.80 eV, the overtone of the ionic hydrogen bond mode in the precursor F–(H2O), 2νIHB at 2885 cm–1, was excited using a tunable IR laser. Experiment and theory show that vibrational energy in the anion can be effectively carried away by the photoelectron upon a Franck–Condon photodetachment, and also show evidence for an increase of branching into the F + H2O reactant channel. The experimental results suggest a greater role for product rotational excitation than theory. Improved potential energy surfaces and longer wavepacket propagation times would be helpful to further examine the nature of the discrepancy.
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Affiliation(s)
- Amelia W Ray
- Department of Chemistry and Biochemistry , University of California, San Diego , 9500 Gilman Drive , La Jolla , California 92093-0340 , USA .
| | - Jianyi Ma
- Institute of Atomic and Molecular Physics , Sichuan University , Chengdu , Sichuan 610065 , China .
| | - Rico Otto
- Department of Chemistry and Biochemistry , University of California, San Diego , 9500 Gilman Drive , La Jolla , California 92093-0340 , USA .
| | - Jun Li
- School of Chemistry and Chemical Engineering , Chongqing University , Chongqing 401331 , China
| | - Hua Guo
- Department of Chemistry and Chemical Biology , University of New Mexico , Albuquerque , New Mexico 87131 , USA
| | - Robert E Continetti
- Department of Chemistry and Biochemistry , University of California, San Diego , 9500 Gilman Drive , La Jolla , California 92093-0340 , USA .
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21
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Pastorczak E, Shen J, Hapka M, Piecuch P, Pernal K. Intricacies of van der Waals Interactions in Systems with Elongated Bonds Revealed by Electron-Groups Embedding and High-Level Coupled-Cluster Approaches. J Chem Theory Comput 2017; 13:5404-5419. [DOI: 10.1021/acs.jctc.7b00797] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Affiliation(s)
- Ewa Pastorczak
- Institute
of Physics, Lodz University of Technology, ul. Wolczanska 219, 90-924 Lodz, Poland
| | - Jun Shen
- Department
of Chemistry, Michigan State University, East Lansing, Michigan 48824, United States
| | - Michał Hapka
- Faculty
of Chemistry, University of Warsaw, ul. Pasteura 1, 02-093 Warsaw, Poland
| | - Piotr Piecuch
- Department
of Chemistry, Michigan State University, East Lansing, Michigan 48824, United States
- Department
of Physics and Astronomy, Michigan State University, East Lansing, Michigan 48824, United States
| | - Katarzyna Pernal
- Institute
of Physics, Lodz University of Technology, ul. Wolczanska 219, 90-924 Lodz, Poland
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22
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Shen Z, Ma H, Zhang C, Fu M, Wu Y, Bian W, Cao J. Dynamical importance of van der Waals saddle and excited potential surface in C( 1D)+D 2 complex-forming reaction. Nat Commun 2017; 8:14094. [PMID: 28094253 PMCID: PMC5247604 DOI: 10.1038/ncomms14094] [Citation(s) in RCA: 36] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/23/2016] [Accepted: 11/29/2016] [Indexed: 11/28/2022] Open
Abstract
Encouraged by recent advances in revealing significant effects of van der Waals wells on reaction dynamics, many people assume that van der Waals wells are inevitable in chemical reactions. Here we find that the weak long-range forces cause van der Waals saddles in the prototypical C(1D)+D2 complex-forming reaction that have very different dynamical effects from van der Waals wells at low collision energies. Accurate quantum dynamics calculations on our highly accurate ab initio potential energy surfaces with van der Waals saddles yield cross-sections in close agreement with crossed-beam experiments, whereas the same calculations on an earlier surface with van der Waals wells produce much smaller cross-sections at low energies. Further trajectory calculations reveal that the van der Waals saddle leads to a torsion then sideways insertion reaction mechanism, whereas the well suppresses reactivity. Quantum diffraction oscillations and sharp resonances are also predicted based on our ground- and excited-state potential energy surfaces. It is commonly held that van der Waals wells are inevitable in chemical reactions. Here, the authors show that weak van der Waals forces in the entrance channel of a prototypical complex-forming reaction cause a van der Waals saddle instead, with different dynamical effects from a well at low collision energies.
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Affiliation(s)
- Zhitao Shen
- State Key Laboratory of Molecular Reaction Dynamics, Beijing National Laboratory for Molecular Sciences, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China.,School of Chemistry and Chemical Engineering, University of Chinese Academy of Sciences, Beijing 100049, China
| | - Haitao Ma
- State Key Laboratory of Molecular Reaction Dynamics, Beijing National Laboratory for Molecular Sciences, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China
| | - Chunfang Zhang
- State Key Laboratory of Molecular Reaction Dynamics, Beijing National Laboratory for Molecular Sciences, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China.,School of Chemistry and Chemical Engineering, University of Chinese Academy of Sciences, Beijing 100049, China
| | - Mingkai Fu
- State Key Laboratory of Molecular Reaction Dynamics, Beijing National Laboratory for Molecular Sciences, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China.,School of Chemistry and Chemical Engineering, University of Chinese Academy of Sciences, Beijing 100049, China
| | - Yanan Wu
- State Key Laboratory of Molecular Reaction Dynamics, Beijing National Laboratory for Molecular Sciences, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China.,School of Chemistry and Chemical Engineering, University of Chinese Academy of Sciences, Beijing 100049, China
| | - Wensheng Bian
- State Key Laboratory of Molecular Reaction Dynamics, Beijing National Laboratory for Molecular Sciences, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China.,School of Chemistry and Chemical Engineering, University of Chinese Academy of Sciences, Beijing 100049, China
| | - Jianwei Cao
- State Key Laboratory of Molecular Reaction Dynamics, Beijing National Laboratory for Molecular Sciences, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China
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23
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Abstract
Recent experimental and theoretical advances in transient reaction dynamics probed by photodetachment of polyatomic anions are reviewed.
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Affiliation(s)
- Robert E. Continetti
- Department of Chemistry and Biochemistry
- University of California San Diego
- La Jolla
- USA
| | - Hua Guo
- Department of Chemistry and Chemical Biology
- University of New Mexico
- Albuquerque
- USA
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24
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Fu B, Shan X, Zhang DH, Clary DC. Recent advances in quantum scattering calculations on polyatomic bimolecular reactions. Chem Soc Rev 2017; 46:7625-7649. [DOI: 10.1039/c7cs00526a] [Citation(s) in RCA: 63] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
This review surveys quantum scattering calculations on chemical reactions of polyatomic molecules in the gas phase published in the last ten years.
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Affiliation(s)
- Bina Fu
- State Key Laboratory of Molecular Reaction Dynamics and Center for Theoretical and Computational Chemistry
- Dalian Institute of Chemical Physics
- Chinese Academy of Sciences
- Dalian 116023
- China
| | - Xiao Shan
- Physical and Theoretical Chemistry Laboratory
- Department of Chemistry
- University of Oxford
- Oxford
- UK
| | - Dong H. Zhang
- State Key Laboratory of Molecular Reaction Dynamics and Center for Theoretical and Computational Chemistry
- Dalian Institute of Chemical Physics
- Chinese Academy of Sciences
- Dalian 116023
- China
| | - David C. Clary
- Physical and Theoretical Chemistry Laboratory
- Department of Chemistry
- University of Oxford
- Oxford
- UK
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25
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Udagawa T, Tachikawa M. Nuclear quantum effect and H/D isotope effect on F + (H2O)n → FH + (H2O)n−1OH (n = 1-3) reactions. J Chem Phys 2016; 145:164310. [DOI: 10.1063/1.4966162] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
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26
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Guo H, Liu K. Control of chemical reactivity by transition-state and beyond. Chem Sci 2016; 7:3992-4003. [PMID: 30155041 PMCID: PMC6013787 DOI: 10.1039/c6sc01066k] [Citation(s) in RCA: 68] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/08/2016] [Accepted: 04/06/2016] [Indexed: 11/21/2022] Open
Abstract
It has been long established that the transition state for an activated reaction controls the overall reactivity, serving as the bottleneck for reaction flux. However, the role of the transition state in regulating quantum state resolved reactivity has only been addressed more recently, thanks to advances in both experimental and theoretical techniques. In this perspective, we discuss some recent advances in understanding mode-specific reaction dynamics in bimolecular reactions, mainly focusing on the X + H2O/CH4 (X = H, F, Cl, and O(3P)) systems, extensively studied in our groups. These advances shed valuable light on the importance of the transition state in mode-specific and steric dynamics of these prototypical reactions. It is shown that many mode-specific phenomena can be understood in terms of a transition-state based model, which assumes in the sudden limit that the ability of a reactant mode for promoting the reaction stems from its coupling with the reaction coordinate at the transition state. Yet, in some cases the long-range anisotropic interactions in the entrance (or exit) valley, which govern how the trajectories reach (or leave) the transition state, also come into play, thus modifying the reactive outcomes.
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Affiliation(s)
- Hua Guo
- Department of Chemistry and Chemical Biology , University of New Mexico , Albuquerque , New Mexico 87131 , USA .
| | - Kopin Liu
- Institute of Atomic and Molecular Sciences , Academia Sinica , Taipei 10617 , Taiwan .
- Department of Physics , National Taiwan University , Taipei 10617 , Taiwan
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27
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Moradi CP, Xie C, Kaufmann M, Guo H, Douberly GE. Two-center three-electron bonding in ClNH3 revealed via helium droplet infrared laser Stark spectroscopy: Entrance channel complex along the Cl + NH3 → ClNH2 + H reaction. J Chem Phys 2016; 144:164301. [DOI: 10.1063/1.4947089] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
| | - Changjian Xie
- Department of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, USA
| | - Matin Kaufmann
- Department of Physical Chemistry II, Ruhr-University Bochum, D-44801 Bochum, Germany
| | - Hua Guo
- Department of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, USA
| | - Gary E. Douberly
- Department of Chemistry, University of Georgia, Athens, Georgia 30602-2556, USA
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28
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29
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Ma J, Guo H. Reactive and Nonreactive Feshbach Resonances Accessed by Photodetachment of FH2O(-). J Phys Chem Lett 2015; 6:4822-4826. [PMID: 26580571 DOI: 10.1021/acs.jpclett.5b02366] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
Abstract
The photodetachment of the FH2O(-) anion is investigated quantum mechanically on accurate full-dimensional potential energy surfaces of the two lowest-lying electronic states of FH2O. The calculated photoelectron spectrum possesses both broad and sharp features, corresponding to reactive and nonreactive Feshbach resonances. The former extend to both reactant and product channels over the transition state, while the latter are supported by a hydrogen bonded HO-HF well in the product channel. Many of the resonances are assignable with quantum numbers for the stretching and bending modes of the HO-HF complex as well as the H-F vibration. The implications of these resonances in the F + H2O ↔ HF + HO reaction are discussed.
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Affiliation(s)
- Jianyi Ma
- Institute of Atomic and Molecular Physics, Sichuan University , Chengdu, Sichuan 610065, China
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30
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Li J, Jiang B, Song H, Ma J, Zhao B, Dawes R, Guo H. From ab Initio Potential Energy Surfaces to State-Resolved Reactivities: X + H2O ↔ HX + OH [X = F, Cl, and O(3P)] Reactions. J Phys Chem A 2015; 119:4667-87. [DOI: 10.1021/acs.jpca.5b02510] [Citation(s) in RCA: 85] [Impact Index Per Article: 9.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Jun Li
- Department
of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, United States
- School of Chemistry
and Chemical Engineering, Chongqing University, Chongqing 400044, China
| | - Bin Jiang
- Department
of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, United States
| | - Hongwei Song
- Department
of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, United States
| | - Jianyi Ma
- Institute of Atomic
and Molecular Physics, Sichuan University, Chengdu, Sichuan 610065, China
| | - Bin Zhao
- Department
of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, United States
| | - Richard Dawes
- Department
of Chemistry, Missouri University of Science and Technology, Rolla, Missouri 65409, United States
| | - Hua Guo
- Department
of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, United States
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31
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Song H, Guo H. Mode specificity in bond selective reactions F + HOD → HF + OD and DF + OH. J Chem Phys 2015; 142:174309. [DOI: 10.1063/1.4919666] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Hongwei Song
- Department of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, USA
| | - Hua Guo
- Department of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, USA
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32
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Li J, Corchado JC, Espinosa-Garcia J, Guo H. Final state-resolved mode specificity in HX + OH → X + H2O (X = F and Cl) reactions: A quasi-classical trajectory study. J Chem Phys 2015; 142:084314. [DOI: 10.1063/1.4913522] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Jun Li
- School of Chemistry and Chemical Engineering, Chongqing University, Chongqing 400030, China
- Department of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, USA
| | - Jose C. Corchado
- Departamento de Quimica Fisica, Universidad de Extremadura, Badajoz 06071, Spain
| | | | - Hua Guo
- Department of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, USA
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33
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Zhao B, Guo H. Modulations of Transition-State Control of State-to-State Dynamics in the F + H2O → HF + OH Reaction. J Phys Chem Lett 2015; 6:676-680. [PMID: 26262484 DOI: 10.1021/acs.jpclett.5b00071] [Citation(s) in RCA: 30] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
Abstract
The full-dimensional quantum dynamics of the F + H2O → HF + OH reaction is investigated at the state-to-state level for the first time using a transition-state wave packet method on an accurate global potential energy surface. It is found that the H2O rotation enhances the reactivity and the product-state distribution is dominated by HF vibrational excitation while the OH moiety serves effectively as a spectator. These observations underscore the transition-state control of the reaction dynamics, as both the H2O rotational and HF vibrational modes are strongly coupled to the reaction coordinate at the transition state. It is also shown that the transition-state dominance of the reaction dynamics is modulated by other features on the potential energy surface, such as the prereaction well.
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Affiliation(s)
- Bin Zhao
- Department of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, United States
| | - Hua Guo
- Department of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, United States
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34
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Song H, Guo H. Mode Specificity in the HCl + OH → Cl + H2O Reaction: Polanyi’s Rules vs Sudden Vector Projection Model. J Phys Chem A 2015; 119:826-31. [DOI: 10.1021/jp512021m] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Hongwei Song
- Department of Chemistry and
Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, United States
| | - Hua Guo
- Department of Chemistry and
Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, United States
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35
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Li J, Song H, Guo H. Insights into the bond-selective reaction of Cl + HOD(nOH) → HCl + OD. Phys Chem Chem Phys 2015; 17:4259-67. [DOI: 10.1039/c4cp05165c] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The theoretical study of the title reaction reveals strong bond selectivity, vibrational enhancement, and unique product distributions, in agreement with the experiment.
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Affiliation(s)
- Jun Li
- School of Chemistry and Chemical Engineering
- Chongqing University
- Chongqing 400030
- China
- Department of Chemistry and Chemical Biology
| | - Hongwei Song
- Department of Chemistry and Chemical Biology
- University of New Mexico
- Albuquerque
- USA
| | - Hua Guo
- Department of Chemistry and Chemical Biology
- University of New Mexico
- Albuquerque
- USA
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36
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de Oliveira-Filho AGS, Ornellas FR, Bowman JM. Energy disposal and thermal rate constants for the OH + HBr and OH + DBr reactions: quasiclassical trajectory calculations on an accurate potential energy surface. J Phys Chem A 2014; 118:12080-8. [PMID: 25365787 DOI: 10.1021/jp509430p] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
We report reaction cross sections, energy disposal, and rate constants for the OH + HBr → Br + H2O and OH + DBr → Br + HDO reactions from quasiclassical trajectory calculations using an ab initio potential energy surface [ de Oliveira-Filho , A. G. S. ; Ornellas , F. R. ; Bowman , J. M. J. Phys. Chem. Lett. 2014 , 5 , 706 - 712 ]. Comparison with available experiments are made and generally show good agreement.
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Affiliation(s)
- Antonio G S de Oliveira-Filho
- Departamento de Quı́mica Fundamental, Instituto de Quı́mica, Universidade de São Paulo , São Paulo 05508-000, Brazil
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37
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Song H, Li J, Guo H. Mode specificity in the HF + OH → F + H2O reaction. J Chem Phys 2014; 141:164316. [DOI: 10.1063/1.4900445] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022] Open
Affiliation(s)
- Hongwei Song
- Department of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, USA
| | - Jun Li
- Department of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, USA
| | - Hua Guo
- Department of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, USA
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38
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Czakó G, Császár AG, Schaefer HF. Surprising Quenching of the Spin–Orbit Interaction Significantly Diminishes H2O···X [X = F, Cl, Br, I] Dissociation Energies. J Phys Chem A 2014; 118:11956-61. [DOI: 10.1021/jp506287z] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Gábor Czakó
- Laboratory of
Molecular Structure and Dynamics, Institute of Chemistry, Eötvös University, P.O. Box 32, H-1518 Budapest 112, Hungary
| | - Attila G. Császár
- Laboratory of
Molecular Structure and Dynamics, Institute of Chemistry, Eötvös University, P.O. Box 32, H-1518 Budapest 112, Hungary
- MTA-ELTE Research
Group on Complex Chemical Systems, Pázmány Péter sétány 1/A, H-1117 Budapest, Hungary
| | - Henry F. Schaefer
- Center
for Computational Quantum Chemistry, University of Georgia, Athens, Georgia 30602, United States
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39
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Alday B, Johnson R, Li J, Guo H. Hemibond complexes between H2S and free radicals (F, Cl, Br, and OH). Theor Chem Acc 2014. [DOI: 10.1007/s00214-014-1540-3] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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40
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Roncaratti LF, Cappelletti D, Pirani F. The spontaneous synchronized dance of pairs of water molecules. J Chem Phys 2014; 140:124318. [PMID: 24697452 DOI: 10.1063/1.4869595] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
Affiliation(s)
- Luiz F Roncaratti
- Dipartimento di Chimica, Biologia e Biotecnologie, Università degli Studi di Perugia, 06123 Perugia, Italy
| | - David Cappelletti
- Dipartimento di Chimica, Biologia e Biotecnologie, Università degli Studi di Perugia, 06123 Perugia, Italy
| | - Fernando Pirani
- Dipartimento di Chimica, Biologia e Biotecnologie, Università degli Studi di Perugia, 06123 Perugia, Italy
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41
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de Oliveira-Filho AGS, Ornellas FR, Bowman JM. Quasiclassical Trajectory Calculations of the Rate Constant of the OH + HBr → Br + H2O Reaction Using a Full-Dimensional Ab Initio Potential Energy Surface Over the Temperature Range 5 to 500 K. J Phys Chem Lett 2014; 5:706-12. [PMID: 26270841 DOI: 10.1021/jz5000325] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/27/2023]
Abstract
We report a permutationally invariant, ab initio potential energy surface (PES) for the OH + HBr → Br + H2O reaction. The PES is a fit to roughly 26 000 spin-free UCCSD(T)/cc-pVDZ-F12a energies and has no classical barrier to reaction. It is used in quasiclassical trajectory calculations with a focus on the thermal rate constant, k(T), over the temperature range 5 to 500 K. Comparisons with available experimental data over the temperature range 23 to 416 K are made using three approaches to treat the OH rotational and associated electronic partition function. All display an inverse temperature dependence of k(T) below roughly 160 K and a nearly constant temperature dependence above 160 K, in agreement with experiment. The calculated rate constant with no treatment of spin-orbit coupling is overall in the best agreement with experiment, being (probably fortuitously) within 20% of it.
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Affiliation(s)
- Antonio G S de Oliveira-Filho
- †Departamento de Química Fundamental, Instituto de Química, Universidade de São Paulo, São Paulo, São Paulo, 05508-000, Brazil
- ‡Cherry L. Emerson Center for Scientific Computation and Department of Chemistry, Emory University, Atlanta, Georgia 30322, United States
| | - Fernando R Ornellas
- †Departamento de Química Fundamental, Instituto de Química, Universidade de São Paulo, São Paulo, São Paulo, 05508-000, Brazil
| | - Joel M Bowman
- ‡Cherry L. Emerson Center for Scientific Computation and Department of Chemistry, Emory University, Atlanta, Georgia 30322, United States
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42
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Jiang B, Guo H. Relative efficacy of vibrational vs. translational excitation in promoting atom-diatom reactivity: rigorous examination of Polanyi's rules and proposition of sudden vector projection (SVP) model. J Chem Phys 2014; 138:234104. [PMID: 23802948 DOI: 10.1063/1.4810007] [Citation(s) in RCA: 155] [Impact Index Per Article: 15.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
To provide a systematic and rigorous re-examination of the well-known Polanyi's rules, excitation functions of several A + BC(v = 0, 1) reactions are determined using the Chebyshev real wave packet method on accurate potential energy surfaces. Reactions with early (F + H2 and F + HCl), late (Cl + H2), and central (H∕D∕Mu + H2, where Mu is a short-lived light isotope of H) barriers are represented. Although Polanyi's rules are in general consistent with the quantum dynamical results, their predictions are strictly valid only in certain energy ranges divided by a cross-over point. In particular, vibrational excitation of the diatomic reactant typically enhances reactivity more effectively than translational excitation at high energies, while reverse is true at low energies. This feature persists irrespective of the barrier location. A sudden vector projection model is proposed as an alternative to Polanyi's rules. It is found to give similar, but more quantitative, predictions about mode selectivity in these reactions, and has the advantage to be extendible to reactions involving polyatomic molecules.
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Affiliation(s)
- Bin Jiang
- Department of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, USA
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43
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Otto R, Ma J, Ray AW, Daluz JS, Li J, Guo H, Continetti RE. Imaging Dynamics on the F + H
2
O → HF + OH Potential Energy Surfaces from Wells to Barriers. Science 2014; 343:396-9. [DOI: 10.1126/science.1247424] [Citation(s) in RCA: 81] [Impact Index Per Article: 8.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/02/2022]
Affiliation(s)
- Rico Otto
- Department of Chemistry and Biochemistry, University of California, San Diego, 9500 Gilman Drive, La Jolla, CA 92093, USA
| | - Jianyi Ma
- Institute of Atomic and Molecular Physics, Sichuan University, Chengdu, Sichuan 610065, China
- Department of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, NM 87131, USA
| | - Amelia W. Ray
- Department of Chemistry and Biochemistry, University of California, San Diego, 9500 Gilman Drive, La Jolla, CA 92093, USA
| | - Jennifer S. Daluz
- Department of Chemistry and Biochemistry, University of California, San Diego, 9500 Gilman Drive, La Jolla, CA 92093, USA
| | - Jun Li
- Department of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, NM 87131, USA
| | - Hua Guo
- Department of Chemistry and Chemical Biology, University of New Mexico, Albuquerque, NM 87131, USA
| | - Robert E. Continetti
- Department of Chemistry and Biochemistry, University of California, San Diego, 9500 Gilman Drive, La Jolla, CA 92093, USA
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44
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Monge-Palacios M, Corchado JC, Espinosa-Garcia J. Dynamics study of the OH + NH3 hydrogen abstraction reaction using QCT calculations based on an analytical potential energy surface. J Chem Phys 2014; 138:214306. [PMID: 23758370 DOI: 10.1063/1.4808109] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022] Open
Abstract
To understand the reactivity and mechanism of the OH + NH3 → H2O + NH2 gas-phase reaction, which evolves through wells in the entrance and exit channels, a detailed dynamics study was carried out using quasi-classical trajectory calculations. The calculations were performed on an analytical potential energy surface (PES) recently developed by our group, PES-2012 [Monge-Palacios et al. J. Chem. Phys. 138, 084305 (2013)]. Most of the available energy appeared as H2O product vibrational energy (54%), reproducing the only experimental evidence, while only the 21% of this energy appeared as NH2 co-product vibrational energy. Both products appeared with cold and broad rotational distributions. The excitation function (constant collision energy in the range 1.0-14.0 kcal mol(-1)) increases smoothly with energy, contrasting with the only theoretical information (reduced-dimensional quantum scattering calculations based on a simplified PES), which presented a peak at low collision energies, related to quantized states. Analysis of the individual reactive trajectories showed that different mechanisms operate depending on the collision energy. Thus, while at high energies (E(coll) ≥ 6 kcal mol(-1)) all trajectories are direct, at low energies about 20%-30% of trajectories are indirect, i.e., with the mediation of a trapping complex, mainly in the product well. Finally, the effect of the zero-point energy constraint on the dynamics properties was analyzed.
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Affiliation(s)
- M Monge-Palacios
- Departamento de Química Física, Universidad de Extremadura, 06071 Badajoz, Spain
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45
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Li J, Guo H. A nine-dimensional global potential energy surface for NH4(X2A1) and kinetics studies on the H + NH3 ↔ H2 + NH2 reaction. Phys Chem Chem Phys 2014; 16:6753-63. [DOI: 10.1039/c4cp00241e] [Citation(s) in RCA: 49] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A nine-dimensional global potential energy surface (PES) for the NH4 system is developed from ∼105 high-level ab initio points and the hydrogen abstraction kinetics on the PES agree with experiment.
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Affiliation(s)
- Jun Li
- Department of Chemistry and Chemical Biology
- University of New Mexico
- Albuquerque, USA
| | - Hua Guo
- Department of Chemistry and Chemical Biology
- University of New Mexico
- Albuquerque, USA
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46
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Jiang B, Guo H. Competition between abstraction and exchange channels in H + HCN reaction: Full-dimensional quantum dynamics. J Chem Phys 2013; 139:224310. [DOI: 10.1063/1.4840475] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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47
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Li J, Guo H. Quasi‐classical Trajectory Study of F+H2O→HF+OH Reaction: Influence of Barrier Height, Reactant Rotational Excitation, and Isotopic Substitution. CHINESE J CHEM PHYS 2013. [DOI: 10.1063/1674-0068/26/06/627-634] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]
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48
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Li J, Jiang B, Guo H. Permutation invariant polynomial neural network approach to fitting potential energy surfaces. II. Four-atom systems. J Chem Phys 2013; 139:204103. [DOI: 10.1063/1.4832697] [Citation(s) in RCA: 237] [Impact Index Per Article: 21.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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49
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Jiang B, Guo H. Control of Mode/Bond Selectivity and Product Energy Disposal by the Transition State: X + H2O (X = H, F, O(3P), and Cl) Reactions. J Am Chem Soc 2013; 135:15251-6. [DOI: 10.1021/ja408422y] [Citation(s) in RCA: 115] [Impact Index Per Article: 10.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Bin Jiang
- Department of Chemistry and
Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, United States
| | - Hua Guo
- Department of Chemistry and
Chemical Biology, University of New Mexico, Albuquerque, New Mexico 87131, United States
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YANG YANG, LIU RUI, WAN RENZHUO, YANG MINGHUI. SEVEN-DIMENSIONAL QUANTUM DYNAMICS STUDY OF THE H2 + NH2 → H + NH3 REACTION ON AN INTERPOLATED POTENTIAL ENERGY SURFACE. JOURNAL OF THEORETICAL & COMPUTATIONAL CHEMISTRY 2013. [DOI: 10.1142/s0219633613500545] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
Initial-state-selected time-dependent wave packet dynamics studies have been performed for the H 2 + NH 2 → H + NH 3 reaction with a seven-dimensional model on a new interpolated ab initio potential energy surface (PES). The PES is constructed using modified Shepard interpolation Scheme and contains 1967 data points with ab initio calculations carried out on UCCSD(T)/aug-cc-pVTZ level. In the seven-dimensional model, NH 2 group keeps C2v symmetry and two NH bonds are fixed at their equilibrium values. The total reaction probabilities are calculated when (1) the two reactants are initially at their ground states; (2) NH 2 bending mode is excited, and (3) H 2 is on its first vibrational excited state. The integral cross sections are also reported for these initial states with centrifugal-sudden approximation. Thermal rate constants are calculated for the temperature range of 200–2000 K and compared with the previous calculated values and available experimental data. Good agreements between theory and experiments for the rate constants at intermediate temperature are achieved on this PES.
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Affiliation(s)
- YANG YANG
- Key Laboratory of Magnetic Resonance in Biological Systems, State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, Wuhan Centre for Magnetic Resonance, Wuhan Institute of Physics and Mathematics, Chinese Academy of Sciences, Wuhan 430071, P. R. China
| | - RUI LIU
- Key Laboratory of Magnetic Resonance in Biological Systems, State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, Wuhan Centre for Magnetic Resonance, Wuhan Institute of Physics and Mathematics, Chinese Academy of Sciences, Wuhan 430071, P. R. China
| | - RENZHUO WAN
- Key Laboratory of Magnetic Resonance in Biological Systems, State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, Wuhan Centre for Magnetic Resonance, Wuhan Institute of Physics and Mathematics, Chinese Academy of Sciences, Wuhan 430071, P. R. China
- School of Electronic and Electrical Engineering, Wuhan Textile University, Wuhan 430200, P. R. China
| | - MINGHUI YANG
- Key Laboratory of Magnetic Resonance in Biological Systems, State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, Wuhan Centre for Magnetic Resonance, Wuhan Institute of Physics and Mathematics, Chinese Academy of Sciences, Wuhan 430071, P. R. China
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