Organometallics in molecular junctions: conductance, functions, and reactions

Molecular junctions, which involve sandwiching molecular structures between electrodes, play a crucial role in molecular electronics. Recent advances in this field have revealed the vital role of organometallic chemistry in the investigation of molecular junctions, which has added to their well-known contributions to catalysis and materials chemistry. This review summarizes the recent examples of organometallic chemistry applications in molecular junctions, which can be categorized into three types, i.e., class I encompassing molecular junctions with bridging organometallic complexes, class II involving molecular junctions with covalent and noncovalent metal electrode-carbon bonds, and class III comprising organometallic reactions within molecular junctions.

Manipulating the charge transport via incorporating a cobalt bridge into a single-molecule junction

Cobalt-bridged organometallic molecular wires (p-Co-p, p-Co-m and m-Co-m) are synthesized, and their charge transport properties are studied. The experimental results show that the quantum interference (QI) effects of cobalt-bridged organometallic wires are determined by the anchoring group. Interestingly, the cobalt-bridge reduces the conductance of the junctions and tunes the QI effect of the wires. These results demonstrate the unique property of metal-bridged organometallic molecular wires and their potential applications in molecular electronics.

Tuning the current rectification behavior of Rh2-based molecular junctions by varying their supramolecular structures

Molecular junctions with similar backbones, tunable chemical structures and controllable length are critical for the systematic study of the structure-functionality relationships of their charge transport behavior. Taking advantage of the feasibility and tunability of stepwise fabrication, we built series of asymmetric supramolecular SAMs on gold using Rh₂(O₂CCR₃)₄ (Rh₂, R = CH₃, H, and F) as the building blocks and conjugated N,N'-bidentate ligands (pyrazine (L_S), 4,4'-bipyridine (L_M) and 1,2-bis(4-pyridyl)ethene (L_L)) as the bridges. By varying the Rh₂ units and bridging ligands, series of supramolecules with similar backbone and tunable chemical structures were assembled on gold. Their charge transport behavior was examined using conductive-probe atomic force microscopy. Notably, current rectification diminishes gradually as the degree of conjugation of the bridging ligands gets larger from L_S to L_L due to the decrease in the energy gap between the donor and the acceptor in π(Rh₂)-π(L) conjugated MO arrays. Additionally, current rectification can be enhanced when the charge transport mechanistic transits from tunneling in dimers to hopping in tetramers. Unlike charges hopping along the MO arrays in tetramers, charges tunnel through the frontier MOs in dimers. The occupied frontier MOs of dimers localize near the center of the supramolecules or delocalize on the donor and acceptor, which contributes to the weakening of the asymmetric charge tunneling. This work reveals that the frontier MO configurations of these supramolecules could be adjusted by varying their chemical structures, and consequently realize tuning of their charge transport behavior, which deepens the understanding of the charge transport behavior and benefits the establishment of the structure-functionality relationship of Rh₂-based molecular junctions.

Application of Micro/Nanofabrication Techniques to On-Chip Molecular Electronics

Molecular electronics is a promising subject to overcome the size limitation of silicon-based electronic devices. In the past decades, various micro/nanofabrication techniques have been developed for constructing molecular junctions, and a number of breakthroughs are made in the characterizations and applications of the single-molecule device. The history and progress are reviewed in this article, laying emphasis on the recent works on the combination of micro/nanofabrication techniques with other techniques such as electrochemical deposition and surface-enhanced Raman spectroscopy (SERS). Some prototypical single-molecule devices such as molecular transistors are presented. Finally, the challenges and prospects in the fabrication of single-molecule devices are discussed.

Fine-tuning the DNA conductance by intercalation of drug molecules

In this work we study the structure-transport property relationships of small ligand intercalated DNA molecules using a multiscale modeling approach where extensive ab initio calculations are performed on numerous MD-simulated configurations of dsDNA and dsDNA intercalated with two different intercalators, ethidium and daunomycin. DNA conductance is found to increase by one order of magnitude upon drug intercalation due to the local unwinding of the DNA base pairs adjacent to the intercalated sites, which leads to modifications of the density of states in the near-Fermi-energy region of the ligand-DNA complex. Our study suggests that the intercalators can be used to enhance or tune the DNA conductance, which opens new possibilities for their potential applications in nanoelectronics.

Oxidized divinyl oligoacene-bridged diruthenium complexes: bridged localized radical characters and reduced aromaticity in bridge cores

A series of bimetallic ruthenium vinyl complexes 1-5 bridged by oligoacenes were synthesized and characterized in this study. Comparative cyclic voltammetry results from 1-5 indicated that the first oxidation potential decreased gradually with the extension of conjugate ligands. Upon oxidation to singly oxidized species 1+-5+, rather small ν(CO) changes in the infrared (IR) spectra and the characteristic bands of metal-to-ligand charge transfer absorptions in the near IR (NIR) region predicted via time-dependent DFT calculations suggested that strong bridged ligands participate in redox processes. NIR absorptions were not observed in complexes 4+ and 5+ possibly because of instability in their twisted and noncoplanar geometry. Electron paramagnetic resonance results and spin density distribution demonstrated that the bridged localized degrees of 1+-5+ successively increased with the extension of oligoacene from benzene to tetracene. Further comparative analysis of neutral molecules and monocations to the aromaticity and π-electron density of bridge cores indicated a step-by-step transformation process from an aromatic to quinoidal radical upon oxidation.

Constructive Quantum Interference in Single-Molecule Benzodichalcogenophene Junctions

Heteroatom substitution into the cores of alternant, aromatic hydrocarbons containing only even-membered rings is attracting increasing interest as a method of tuning their electrical conductance. Here, the effect of heteroatom substitution into molecular cores of non-alternant hydrocarbons, containing odd-membered rings, is examined. Benzodichalcogenophene (BDC) compounds are rigid, planar π-conjugated structures, with molecular cores containing five-membered rings fused to a six-membered aryl ring. To probe the sensitivity or resilience of constructive quantum interference (CQI) in these non-bipartite molecular cores, two C₂ -symmetric molecules (I and II) and one asymmetric molecule (III) were investigated. I (II) contains S (O) heteroatoms in each of the five-membered rings, while III contains an S in one five-membered ring and an O in the other. Differences in their conductances arise primarily from the longer S-C and shorter O-C bond lengths compared with the C-C bond and the associated changes in their resonance integrals. Although the conductance of III is significantly lower than the conductances of the others, CQI was found to be resilient and persist in all molecules.

Hydrogenating an organometallic carbon chain: buten-yn-diyl (CH[double bond, length as m-dash]CHC[triple bond, length as m-dash]C) as a missing link

The sequential reaction of [Ru(C[triple bond, length as m-dash]CC[triple bond, length as m-dash]CH)Cl(CO)2(PPh3)2] with [Ru(CO)2(PPh3)3], and N-chlorosuccinimide affords the binuclear tetracarbido complex [Ru2(μ-C[triple bond, length as m-dash]CC[triple bond, length as m-dash]C)Cl2(CO)4(PPh3)4]. This may be compared with the first example of a butenyndiyl bridged bimetallic complex [Ru2(μ-CH[double bond, length as m-dash]CHC[triple bond, length as m-dash]C)Cl2(CO)4(PPh3)4] which is obtained from the reaction of [Ru(C[triple bond, length as m-dash]CC[triple bond, length as m-dash]CH)Cl(CO)2(PPh3)2] with [RuHCl(CO)(PPh3)3] followed by carbonylation. Characterisational data are discussed with reference to constituent model complexes [Ru(C[triple bond, length as m-dash]CH)Cl(CO)2(PPh3)2] and [Ru(CH[double bond, length as m-dash]CH2)Cl(CO)2(PPh3)2] in addition to DFT analysis of the bonding in the complexes [Ru2(μ-L)Cl2(CO)4(PMe3)4] (L = C[triple bond, length as m-dash]C-C[triple bond, length as m-dash]C, CH[double bond, length as m-dash]CHC[triple bond, length as m-dash]C, CH[double bond, length as m-dash]CH-CH[double bond, length as m-dash]CH). A range of other tetracarbido complexes which may be prepared from [RuCl(C[triple bond, length as m-dash]CC[triple bond, length as m-dash]CH)(CO)2(PPh3)2] is also described and includes [RuAu(μ-C4)Cl(CO)3(PPh3)3], [RuIr(μ-C4)Cl(CO)3(PPh3)4], [RuIr(μ-C4)H(NCMe)(CO)3(PPh3)4]BF4, [RuIr(μ-C4)Cl(η2-O2)(CO)3(PPh3)4], [Ru2Hg(μ-C4)2Cl2(CO)4(PPh3)4], [Ru2Pt(μ-C4)2Cl2(CO)4(PPh3)6] and [Ru2(μ-C4)HCl(CO)4(PPh3)4].

A self-assembling luminescent lanthanide molecular nanoparticle with potential for live cell imaging

Four luminescent 32-metal Cd-Tb nanoclusters, [Tb₈Cd₂₄(L¹)₁₂(OAc)₄₈] (1), [Tb₈Cd₂₄(L²)₁₂(OAc)₄₈] (2), [Tb₈Cd₂₄(L³)₁₂(OAc)₄₈] (3) and [Tb₈Cd₂₄(L²)₁₂(1,4-BDC)₄(OAc)₃₈(OH)₂] (4), were constructed from three specially designed chain-like Schiff base ligands H₂L^1-3 with flexible carbon-carbon backbones containing 5, 6 and 10 methylene units, respectively. The clusters exhibit drum-like structures and can be imaged using transmission electron microscopy (TEM). In addition to the Schiff base ligands (the primary energy transfer donors), four 1,4-BDC bridging units were successfully introduced into the structure of 4. In addition to providing increased structural stability, the 1,4-BDC units act as secondary energy transfer donors providing extra energy for lanthanide luminescence, which results in improved luminescence properties when compared to those of the related Cd-Ln nanoclusters without 1,4-BDC units. In vitro investigations on 4 with SGC and PANC cancer cells revealed an accumulation of the molecular nanoparticles in the cells, as confirmed by confocal microscopy. The cytotoxicity of 4 toward the SGC and PANC cells is moderate (IC₅₀ values of 4 lie in the range of 15-60 μM). ICP-MS analysis reveals that cellular uptakes of 4 in 1000 SGC and PANC cells after treatment for 3 hours are 0.0094 pmol and 0.015 pmol, respectively.

Push-pull D-π-Ru-π-A chromophores: synthesis and electrochemical, photophysical and second-order nonlinear optical properties

The present work describes the one-pot synthesis and electrochemical, photophysical and second-order nonlinear optical (NLO) properties of a series of dipolar π-delocalized Ru(ii) dialkynyl complexes. The eight new asymmetrical D-π-Ru-π-A push-pull chromophores incorporate pyranylidene ligands as pro-aromatic donor groups (D) and formaldehyde, indane-1,3-dione, pyrimidine or pyrimidinium as electron-attracting groups (A) separated by ruthenium bis-acetylide fragments and π-conjugated linkers. The second-order nonlinear optical (NLO) properties of all eight complexes were determined by the Electric-Field-Induced Second Harmonic generation (EFISH) technique (operating at 1907 nm), and were compared to those of their purely organic analogs. All investigated compounds (organic and organometallic) exhibited positive μβ values, which dramatically increased for the complexes due to the presence of ruthenium in the π-conjugated core. The second-order NLO response could also be easily modulated by changing the nature of alkynyl substituents. The most promising ruthenium complexes 7 and 8 of the series with the pyrimidinium fragment displayed μβ values of 14 000 × 10^-48 esu. The effect of structural modifications on the redox and spectroscopic properties of the complexes was also studied. The intramolecular charge transfer (ICT) occurring through the ruthenium center of the push-pull σ-dialkynyl complexes was investigated by combining experimental and theoretical data.

Bridged cyclometalated diruthenium complexes for fundamental electron transfer studies and multi-stage redox switching

Four bridged cyclometalated diruthenium systems are highlighted in this Frontier article, including strongly-coupled diruthenium complexes with a short phen-1,4-diyl or a planar pyren-2,7-diyl bridge, redox asymmetric diruthenium complexes characterized by different terminal ligands on the two ends, diruthenium complexes with a urea bridge that allows modulating the degree of electronic coupling, and those with a redox-active amine bridge with varying electronic structures. These complexes posess redox couples with low potentials and intense intervalence charge transfer absorptions in the near-infrared region in the one-electron-oxidized mixed-valent state. They are appealing not only for providing a platform for fundamental electron transfer studies but also as molecular materials with multi-stage redox switching properties.

Protonation tuning of quantum interference in azulene-type single-molecule junctions

The protonation of azulene cores offers significant conductance tuning in single-molecule junctions with quantum interference.

The protonation of azulene derivatives with quantum interference effects is studied by the conductance measurements of single-molecule junctions. Three azulene derivatives with different connectivities are synthesized and reacted with trifluoroacetic acid to form the protonated states. It is found that the protonated azulene molecular junctions produce more than one order of magnitude higher conductance than the neutral states, while the molecules with destructive interference show more significant changes. These experimental observations are supported by our recently-developed parameter free theory of connectivity, which suggests that the largest conductance change occurs when destructive interference near the Fermi energy in the neutral state is alleviated by protonation.

Single-Molecule Conductance Studies of Organometallic Complexes Bearing 3-Thienyl Contacting Groups

The compounds and complexes 1,4-C6 H4 (C≡C-cyclo-3-C4 H3 S)2 (2), trans-[Pt(C≡C-cyclo-3-C4 H3 S)2 (PEt3 )2 ] (3), trans-[Ru(C≡C-cyclo-3-C4 H3 S)2 (dppe)2 ] (4; dppe=1,2-bis(diphenylphosphino)ethane) and trans-[Ru(C≡C-cyclo-3-C4 H3 S)2 {P(OEt)3 }4 ] (5) featuring the 3-thienyl moiety as a surface contacting group for gold electrodes have been prepared, crystallographically characterised in the case of 3-5 and studied in metal|molecule|metal junctions by using both scanning tunnelling microscope break-junction (STM-BJ) and STM-I(s) methods (measuring the tunnelling current (I) as a function of distance (s)). The compounds exhibit similar conductance profiles, with a low conductance feature being more readily identified by STM-I(s) methods, and a higher feature by the STM-BJ method. The lower conductance feature was further characterised by analysis using an unsupervised, automated multi-parameter vector classification (MPVC) of the conductance traces. The combination of similarly structured HOMOs and non-resonant tunnelling mechanism accounts for the remarkably similar conductance values across the chemically distinct members of the family 2-5.

Anisotropic lanthanide-based nano-clusters for imaging applications

We have developed a new class of lanthanide nano-clusters that self-assemble using flexible Schiff base ligands. Cd-Ln and Ni-Ln clusters, [Ln8Cd24(L1)12(OAc)39Cl7(OH)2] (Ln = Nd, Eu), [Eu8Cd24(L1)12(OAc)44], [Ln8Cd24(L2)12(OAc)44] (Ln = Nd, Yb, Sm) and [Nd2Ni4(L3)2(acac)6(NO3)2(OH)2], were constructed using different types of flexible Schiff base ligands. These molecular nano-clusters exhibit anisotropic architectures that differ considerably depending upon the presence of Cd (nano-drum) or Ni (square-like nano-cluster). Structural characterization of the self-assembled particles has been undertaken using crystallography, transmission electron microscopy and small-angle X-ray scattering. Comparison of the metric dimensions of the nano-drums shows a consistency of size using these techniques, suggesting that these molecules may share similar structural features in both solid and solution states. Photophysical properties were studied by excitation of the ligand-centered absorption bands in the solid state and in solution, and using confocal microscopy of microspheres loaded with the compounds. The emissive properties of these compounds vary depending upon the combination of lanthanide and Cd or Ni present in these clusters. The results provide new insights into the construction of novel high-nuclearity nano-clusters and offer a promising foundation for the development of new functional nanomaterials.

Synthesis and Single-Molecule Conductance Study of Redox-Active Ruthenium Complexes with Pyridyl and Dihydrobenzo[b]thiophene Anchoring Groups

The ancillary ligands 4'-(4-pyridyl)-2,2':6',2''-terpyridine and 4'-(2,3-dihydrobenzo[b]thiophene)-2,2'-6',2"-terpyridine were used to synthesize two series of mono- and dinuclear ruthenium complexes differing in their lengths and anchoring groups. The electrochemical and single-molecular conductance properties of these two series of ruthenium complexes were studied experimentally by means of cyclic voltammetry and the scanning tunneling microscopy-break junction technique (STM-BJ) and theoretically by means of density functional theory (DFT). Cyclic voltammetry data showed clear redox peaks corresponding to both the metal- and ligand-related redox reactions. Single-molecular conductance demonstrated an exponential decay of the molecular conductance with the increase in molecular length for both the series of ruthenium complexes, with decay constants of βPY =2.07±0.1 nm(-1) and βBT =2.16±0.1 nm(-1) , respectively. The contact resistance of complexes with 2,3-dihydrobenzo[b]thiophene (BT) anchoring groups is found to be smaller than the contact resistance of ruthenium complexes with pyridine (PY) anchors. DFT calculations support the experimental results and provided additional information on the electronic structure and charge transport properties in those metal|ruthenium complex|metal junctions.

Notable differences between oxidized diruthenium complexes bridged by four isomeric diethynyl benzodithiophene ligands

Isomeric benzodithiophenes in the core of a diethynyl bridge have a strong impact on the stability and electronic properties of oxidized diruthenium complexes.

Fast Electron Transfer Exchange at Self-Assembled Monolayers of Organometallic Ruthenium(II) σ-Arylacetylide Complexes

A new series of ruthenium organometallic carbon-rich complexes, exhibiting fast electron transfer kinetics combined to a low oxidation potential, was synthesized for self-assembled monolayer (SAM) formation on gold surfaces. The molecules consist of highly conjugated ruthenium(II) mono(σ-arylacetylide) or bis(σ-arylacetylide) complexes functionalized with different bridge units with specific (protected) anchoring groups that possess high affinity for gold, such as thiol, carbodithioate, and isocyanide. Single component and mixed SAMs were prepared and fully characterized by wettability studies, infrared reflection absorption spectroscopy (IRRAS), X-ray photoelectron spectroscopy (XPS), and electrochemical analyses. By applying the Laviron's formalism, fast electron transfer kinetics (≈10(4) s(-1)) were found at the derived self-assemblies while no significant effect could have been evidenced with variation of the bridging unit and of the anchoring moiety. Interestingly, a hexyl aliphatic spacer in the bridging unit with a thiol group and dilution with suitable nonelectroactive thiols lead to better SAM organization and packing, in comparison with undiluted complexes with shorter spacers. Such features make these compounds suitable alternatives to the widely used ferrocene center as redox-active building blocks for reversible charge storage devices.