1
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Meyer F, Hauschild D, Benkert A, Blum M, Yang W, Reinert F, Heske C, Zharnikov M, Weinhardt L. Resonant Inelastic Soft X-ray Scattering and X-ray Emission Spectroscopy of Solid Proline and Proline Solutions. J Phys Chem B 2022; 126:10185-10193. [PMID: 36418225 PMCID: PMC9744097 DOI: 10.1021/acs.jpcb.2c06557] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/14/2022] [Revised: 11/09/2022] [Indexed: 11/25/2022]
Abstract
The amino group of proline is part of a pyrrolidine ring, which makes it unique among the proteinogenic amino acids. To unravel its full electronic structure, proline in solid state and aqueous solution is investigated using X-ray emission spectroscopy and resonant inelastic soft X-ray scattering. By controlling the pH value of the solution, proline is studied in its cationic, zwitterionic, and anionic configurations. The spectra are analyzed within a "building-block principle" by comparing with suitable reference molecules, i.e., acetic acid, cysteine, and pyrrolidine, as well as with spectral calculations based on density functional theory. We find that the electronic structure of the carboxyl group of proline is very similar to that of other amino acids as well as acetic acid. In contrast, the electronic structure of the amino group is significantly different and strongly influenced by the ring structure of proline.
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Affiliation(s)
- Frank Meyer
- Experimentelle
Physik VII, Universität Würzburg, Am Hubland, 97074 Würzburg, Germany
| | - Dirk Hauschild
- Department
of Chemistry and Biochemistry, University
of Nevada, Las Vegas (UNLV), 4505 Maryland Parkway, Las Vegas, Nevada 89154-4003, United States
- Institute
for Photon Science and Synchrotron Radiation (IPS), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
- Institute
for Chemical Technology and Polymer Chemistry (ITCP), Karlsruhe Institute of Technology (KIT), Engesserstraße 18/20, 76128 Karlsruhe, Germany
| | - Andreas Benkert
- Experimentelle
Physik VII, Universität Würzburg, Am Hubland, 97074 Würzburg, Germany
- Institute
for Chemical Technology and Polymer Chemistry (ITCP), Karlsruhe Institute of Technology (KIT), Engesserstraße 18/20, 76128 Karlsruhe, Germany
| | - Monika Blum
- Department
of Chemistry and Biochemistry, University
of Nevada, Las Vegas (UNLV), 4505 Maryland Parkway, Las Vegas, Nevada 89154-4003, United States
- Advanced
Light Source (ALS), Lawrence Berkeley National
Laboratory, Berkeley, California 94720, United States
- Chemical
Sciences Division, Lawrence Berkeley National
Laboratory, Berkeley, California 94720, United States
| | - Wanli Yang
- Advanced
Light Source (ALS), Lawrence Berkeley National
Laboratory, Berkeley, California 94720, United States
| | - Friedrich Reinert
- Experimentelle
Physik VII, Universität Würzburg, Am Hubland, 97074 Würzburg, Germany
| | - Clemens Heske
- Department
of Chemistry and Biochemistry, University
of Nevada, Las Vegas (UNLV), 4505 Maryland Parkway, Las Vegas, Nevada 89154-4003, United States
- Institute
for Photon Science and Synchrotron Radiation (IPS), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
- Institute
for Chemical Technology and Polymer Chemistry (ITCP), Karlsruhe Institute of Technology (KIT), Engesserstraße 18/20, 76128 Karlsruhe, Germany
| | - Michael Zharnikov
- Applied
Physical Chemistry, Heidelberg University, Im Neuenheimer Feld 253, 69120 Heidelberg, Germany
| | - Lothar Weinhardt
- Department
of Chemistry and Biochemistry, University
of Nevada, Las Vegas (UNLV), 4505 Maryland Parkway, Las Vegas, Nevada 89154-4003, United States
- Institute
for Photon Science and Synchrotron Radiation (IPS), Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Germany
- Institute
for Chemical Technology and Polymer Chemistry (ITCP), Karlsruhe Institute of Technology (KIT), Engesserstraße 18/20, 76128 Karlsruhe, Germany
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2
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Ochmann M, Vaz da Cruz V, Eckert S, Huse N, Föhlisch A. R-Group stabilization in methylated formamides observed by resonant inelastic X-ray scattering. Chem Commun (Camb) 2022; 58:8834-8837. [PMID: 35848855 PMCID: PMC9350990 DOI: 10.1039/d2cc00053a] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/10/2022] [Accepted: 07/07/2022] [Indexed: 11/21/2022]
Abstract
The inherent stability of methylated formamides is traced to a stabilization of the deep-lying σ-framework by resonant inelastic X-ray scattering at the nitrogen K-edge. Charge transfer from the amide nitrogen to the methyl groups underlie this stabilization mechanism that leaves the aldehyde group essentially unaltered and explains the stability of secondary and tertiary amides.
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Affiliation(s)
- Miguel Ochmann
- Department of Physics, University of Hamburg and Center for Free-Electron Laser Science, Luruper Chaussee 149, 22761 Hamburg, Germany.
| | - Vinícius Vaz da Cruz
- Institute for Methods and Instrumentation in Synchrotron Radiation Research G-ISRR, Helmholtz-Zentrum Berlin für Materialien und Energie, Albert-Einstein-Strasse 15, 12489 Berlin, Germany.
| | - Sebastian Eckert
- Institute for Methods and Instrumentation in Synchrotron Radiation Research G-ISRR, Helmholtz-Zentrum Berlin für Materialien und Energie, Albert-Einstein-Strasse 15, 12489 Berlin, Germany.
| | - Nils Huse
- Department of Physics, University of Hamburg and Center for Free-Electron Laser Science, Luruper Chaussee 149, 22761 Hamburg, Germany.
| | - Alexander Föhlisch
- Institute for Methods and Instrumentation in Synchrotron Radiation Research G-ISRR, Helmholtz-Zentrum Berlin für Materialien und Energie, Albert-Einstein-Strasse 15, 12489 Berlin, Germany.
- Institut für Physik and Astronomie, Universität Potsdam, Karl-Liebknecht-Strasse 24-25, 14476 Potsdam, Germany
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3
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Vaz da Cruz V, Büchner R, Fondell M, Pietzsch A, Eckert S, Föhlisch A. Targeting Individual Tautomers in Equilibrium by Resonant Inelastic X-ray Scattering. J Phys Chem Lett 2022; 13:2459-2466. [PMID: 35266716 PMCID: PMC8935368 DOI: 10.1021/acs.jpclett.1c03453] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/21/2021] [Accepted: 02/01/2022] [Indexed: 06/14/2023]
Abstract
Tautomerism is one of the most important forms of isomerism, owing to the facile interconversion between species and the large differences in chemical properties introduced by the proton transfer connecting the tautomers. Spectroscopic techniques are often used for the characterization of tautomers. In this context, separating the overlapping spectral response of coexisting tautomers is a long-standing challenge in chemistry. Here, we demonstrate that by using resonant inelastic X-ray scattering tuned to the core excited states at the site of proton exchange between tautomers one is able to experimentally disentangle the manifold of valence excited states of each tautomer in a mixture. The technique is applied to the prototypical keto-enol equilibrium of 3-hydroxypyridine in aqueous solution. We detect transitions from the occupied orbitals into the LUMO for each tautomer in solution, which report on intrinsic and hydrogen-bond-induced orbital polarization within the π and σ manifolds at the proton-transfer site.
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Affiliation(s)
- Vinícius Vaz da Cruz
- Helmholtz-Zentrum
Berlin für Materialien und Energie GmbH, Institute for Methods
and Instrumentation for Synchrotron Radiation Research, 12489 Berlin, Germany
| | - Robby Büchner
- Universität
Potsdam, Institut für Physik und Astronomie, 14476 Potsdam, Germany
| | - Mattis Fondell
- Helmholtz-Zentrum
Berlin für Materialien und Energie GmbH, Institute for Methods
and Instrumentation for Synchrotron Radiation Research, 12489 Berlin, Germany
| | - Annette Pietzsch
- Helmholtz-Zentrum
Berlin für Materialien und Energie GmbH, Institute for Methods
and Instrumentation for Synchrotron Radiation Research, 12489 Berlin, Germany
| | - Sebastian Eckert
- Helmholtz-Zentrum
Berlin für Materialien und Energie GmbH, Institute for Methods
and Instrumentation for Synchrotron Radiation Research, 12489 Berlin, Germany
| | - Alexander Föhlisch
- Helmholtz-Zentrum
Berlin für Materialien und Energie GmbH, Institute for Methods
and Instrumentation for Synchrotron Radiation Research, 12489 Berlin, Germany
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4
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Tofanello A, Freitas ALM, de Queiroz TB, Bonadio A, Martinho H, Souza JA. Magnetism in a 2D Hybrid Ruddlesden-Popper Perovskite through Charge Redistribution Driven by an Organic Functional Spacer. J Phys Chem Lett 2022; 13:1406-1415. [PMID: 35119272 DOI: 10.1021/acs.jpclett.1c04216] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
Abstract
Two-dimensional Ruddlesden-Popper (RP) perovskites are emerging materials offering great synthetic versatility and remarkable features due to the tunability of their crystal structure. We present a novel strategy to provide magnetism in a 2D RP perovskite using histidine molecules as a spacer, which could induce charge rebalancing at the interface of the inorganic layer. We observe that the amide and imidazole groups are close to Pb ions. The interaction with the imidazole indicates that this functional group, possibly assisted by the carboxyl close to the vicinity of the amine terminal, is inducing charge rearrangement from Pb2+ to paramagnetic Pb3+ ions, resulting in a positive magnetic moment. This magnetized 2D hybrid perovskites can be classified as a novel class of promising materials showing a magnetic moment at their interface, which may result in intriguing physical properties due to a delicate balance between magnetism and a quantum well confinement effect in the inorganic layer.
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Affiliation(s)
- A Tofanello
- Center for Natural and Human Sciences (CCNH), Federal University of ABC (UFABC), Santo André 09210-580, Brazil
| | - A L M Freitas
- Center for Natural and Human Sciences (CCNH), Federal University of ABC (UFABC), Santo André 09210-580, Brazil
| | - T B de Queiroz
- Center for Natural and Human Sciences (CCNH), Federal University of ABC (UFABC), Santo André 09210-580, Brazil
| | - A Bonadio
- Center for Natural and Human Sciences (CCNH), Federal University of ABC (UFABC), Santo André 09210-580, Brazil
| | - H Martinho
- Center for Natural and Human Sciences (CCNH), Federal University of ABC (UFABC), Santo André 09210-580, Brazil
| | - J A Souza
- Center for Natural and Human Sciences (CCNH), Federal University of ABC (UFABC), Santo André 09210-580, Brazil
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5
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Eckert S, Vaz da Cruz V, Ochmann M, von Ahnen I, Föhlisch A, Huse N. Breaking the Symmetry of Pyrimidine: Solvent Effects and Core-Excited State Dynamics. J Phys Chem Lett 2021; 12:8637-8643. [PMID: 34472857 PMCID: PMC8436212 DOI: 10.1021/acs.jpclett.1c01865] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/11/2021] [Accepted: 08/03/2021] [Indexed: 06/13/2023]
Abstract
Symmetry and its breaking crucially define the chemical properties of molecules and their functionality. Resonant inelastic X-ray scattering is a local electronic structure probe reporting on molecular symmetry and its dynamical breaking within the femtosecond scattering duration. Here, we study pyrimidine, a system from the C2v point group, in an aqueous solution environment, using scattering though its 2a2 resonance. Despite the absence of clean parity selection rules for decay transitions from in-plane orbitals, scattering channels including decay from the 7b2 and 11a1 orbitals with nitrogen lone pair character are a direct probe for molecular symmetry. Computed spectra of explicitly solvated molecules sampled from a molecular dynamics simulation are combined with the results of a quantum dynamical description of the X-ray scattering process. We observe dominant signatures of core-excited Jahn-Teller induced symmetry breaking for resonant excitation. Solvent contributions are separable by shortening of the effective scattering duration through excitation energy detuning.
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Affiliation(s)
- Sebastian Eckert
- Institute
for Methods and Instrumentation for Synchrotron Radiation Research, Helmholtz-Zentrum Berlin für Materialien und
Energie GmbH, 12489 Berlin, Germany
| | - Vinícius Vaz da Cruz
- Institute
for Methods and Instrumentation for Synchrotron Radiation Research, Helmholtz-Zentrum Berlin für Materialien und
Energie GmbH, 12489 Berlin, Germany
| | - Miguel Ochmann
- Center
for Free-Electron Laser Science, Institute for Nanostructure and Solid
State Physics, University of Hamburg, Luruper Chaussee 149, 22761 Hamburg, Germany
| | - Inga von Ahnen
- Center
for Free-Electron Laser Science, Institute for Nanostructure and Solid
State Physics, University of Hamburg, Luruper Chaussee 149, 22761 Hamburg, Germany
| | - Alexander Föhlisch
- Institute
for Methods and Instrumentation for Synchrotron Radiation Research, Helmholtz-Zentrum Berlin für Materialien und
Energie GmbH, 12489 Berlin, Germany
- Institut
für Physik und Astronomie,Universität
Potsdam, 14476 Potsdam, Germany
| | - Nils Huse
- Center
for Free-Electron Laser Science, Institute for Nanostructure and Solid
State Physics, University of Hamburg, Luruper Chaussee 149, 22761 Hamburg, Germany
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6
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Jay RM, Eckert S, Van Kuiken BE, Ochmann M, Hantschmann M, Cordones AA, Cho H, Hong K, Ma R, Lee JH, Dakovski GL, Turner JJ, Minitti MP, Quevedo W, Pietzsch A, Beye M, Kim TK, Schoenlein RW, Wernet P, Föhlisch A, Huse N. Following Metal-to-Ligand Charge-Transfer Dynamics with Ligand and Spin Specificity Using Femtosecond Resonant Inelastic X-ray Scattering at the Nitrogen K-Edge. J Phys Chem Lett 2021; 12:6676-6683. [PMID: 34260255 PMCID: PMC8312498 DOI: 10.1021/acs.jpclett.1c01401] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2021] [Accepted: 06/04/2021] [Indexed: 06/11/2023]
Abstract
We demonstrate for the case of photoexcited [Ru(2,2'-bipyridine)3]2+ how femtosecond resonant inelastic X-ray scattering (RIXS) at the ligand K-edge allows one to uniquely probe changes in the valence electronic structure following a metal-to-ligand charge-transfer (MLCT) excitation. Metal-ligand hybridization is probed by nitrogen-1s resonances providing information on both the electron-accepting ligand in the MLCT state and the hole density of the metal center. By comparing to spectrum calculations based on density functional theory, we are able to distinguish the electronic structure of the electron-accepting ligand and the other ligands and determine a temporal upper limit of (250 ± 40) fs for electron localization following the charge-transfer excitation. The spin of the localized electron is deduced from the selection rules of the RIXS process establishing new experimental capabilities for probing transient charge and spin densities.
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Affiliation(s)
- Raphael M. Jay
- Institut für Physik und Astronomie,
Universität Potsdam, 14476 Potsdam,
Germany
| | - Sebastian Eckert
- Institut für Physik und Astronomie,
Universität Potsdam, 14476 Potsdam,
Germany
- Institute for Methods and Instrumentation for
Synchrotron Radiation Research, Helmholtz-Zentrum Berlin für
Materialien und Energie, 12489 Berlin, Germany
| | | | - Miguel Ochmann
- Department of Physics, University of
Hamburg and Center for Free-Electron Laser Science, 22761 Hamburg,
Germany
| | - Markus Hantschmann
- Institut für Physik und Astronomie,
Universität Potsdam, 14476 Potsdam,
Germany
- Institute for Methods and Instrumentation for
Synchrotron Radiation Research, Helmholtz-Zentrum Berlin für
Materialien und Energie, 12489 Berlin, Germany
| | - Amy A. Cordones
- Ultrafast X-ray Science Lab, Chemical Sciences
Division, Lawrence Berkeley National Laboratory, Berkeley,
California 94720, United States
| | - Hana Cho
- Ultrafast X-ray Science Lab, Chemical Sciences
Division, Lawrence Berkeley National Laboratory, Berkeley,
California 94720, United States
- Department of Chemistry and Chemistry Institute of Functional
Materials, Pusan National University, Busan 46241,
South Korea
| | - Kiryong Hong
- Department of Chemistry and Chemistry Institute of Functional
Materials, Pusan National University, Busan 46241,
South Korea
| | - Rory Ma
- Department of Physics, University of
Hamburg and Center for Free-Electron Laser Science, 22761 Hamburg,
Germany
- Department of Chemistry and Chemistry Institute of Functional
Materials, Pusan National University, Busan 46241,
South Korea
| | - Jae Hyuk Lee
- Ultrafast X-ray Science Lab, Chemical Sciences
Division, Lawrence Berkeley National Laboratory, Berkeley,
California 94720, United States
| | - Georgi L. Dakovski
- Linac Coherent Light Source, SLAC
National Accelerator Laboratory, Menlo Park, California 94025,
United States
| | - Joshua J. Turner
- Linac Coherent Light Source, SLAC
National Accelerator Laboratory, Menlo Park, California 94025,
United States
- Stanford Institute for Materials and Energy Sciences,
Stanford University, Stanford, California 94305,
United States
| | - Michael P. Minitti
- Linac Coherent Light Source, SLAC
National Accelerator Laboratory, Menlo Park, California 94025,
United States
| | - Wilson Quevedo
- Institute for Methods and Instrumentation for
Synchrotron Radiation Research, Helmholtz-Zentrum Berlin für
Materialien und Energie, 12489 Berlin, Germany
| | - Annette Pietzsch
- Institute for Methods and Instrumentation for
Synchrotron Radiation Research, Helmholtz-Zentrum Berlin für
Materialien und Energie, 12489 Berlin, Germany
| | - Martin Beye
- Institute for Methods and Instrumentation for
Synchrotron Radiation Research, Helmholtz-Zentrum Berlin für
Materialien und Energie, 12489 Berlin, Germany
| | - Tae Kyu Kim
- Department of Chemistry, Yonsei
University, Seoul 03722, Republic of Korea
| | - Robert W. Schoenlein
- Ultrafast X-ray Science Lab, Chemical Sciences
Division, Lawrence Berkeley National Laboratory, Berkeley,
California 94720, United States
| | - Philippe Wernet
- Department of Physics and Astronomy,
Uppsala University, 75120 Uppsala,
Sweden
| | - Alexander Föhlisch
- Institut für Physik und Astronomie,
Universität Potsdam, 14476 Potsdam,
Germany
- Institute for Methods and Instrumentation for
Synchrotron Radiation Research, Helmholtz-Zentrum Berlin für
Materialien und Energie, 12489 Berlin, Germany
| | - Nils Huse
- Department of Physics, University of
Hamburg and Center for Free-Electron Laser Science, 22761 Hamburg,
Germany
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7
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Kostko O, Xu B, Ahmed M. Local electronic structure of histidine in aqueous solution. Phys Chem Chem Phys 2021; 23:8847-8853. [DOI: 10.1039/d1cp00361e] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
X-Ray spectroscopy coupled with DFT calculations reveals the pH dependent electronic structure of an amino acid in an aqueous environment.
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Affiliation(s)
- O. Kostko
- Chemical Sciences Division
- Lawrence Berkeley National Laboratory
- Berkeley
- USA
- Advanced Light Source
| | - B. Xu
- Chemical Sciences Division
- Lawrence Berkeley National Laboratory
- Berkeley
- USA
| | - M. Ahmed
- Chemical Sciences Division
- Lawrence Berkeley National Laboratory
- Berkeley
- USA
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8
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Vaz da Cruz V, Eckert S, Föhlisch A. TD-DFT simulations of K-edge resonant inelastic X-ray scattering within the restricted subspace approximation. Phys Chem Chem Phys 2021; 23:1835-1848. [DOI: 10.1039/d0cp04726k] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
Abstract
Truncation of orbital subspaces in TD-DFT yields an accurate description of RIXS spectra for soft X-ray K-edges.
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Affiliation(s)
- Vinícius Vaz da Cruz
- Helmholtz-Zentrum Berlin für Materialien und Energie GmbH
- Institute for Methods and Instrumentation for Synchrotron Radiation Research
- 12489 Berlin
- Germany
| | - Sebastian Eckert
- Helmholtz-Zentrum Berlin für Materialien und Energie GmbH
- Institute for Methods and Instrumentation for Synchrotron Radiation Research
- 12489 Berlin
- Germany
| | - Alexander Föhlisch
- Helmholtz-Zentrum Berlin für Materialien und Energie GmbH
- Institute for Methods and Instrumentation for Synchrotron Radiation Research
- 12489 Berlin
- Germany
- Universität Potsdam
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9
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Jay RM, Eckert S, Mitzner R, Fondell M, Föhlisch A. Quantitative evaluation of transient valence orbital occupations in a 3d transition metal complex as seen from the metal and ligand perspective. Chem Phys Lett 2020. [DOI: 10.1016/j.cplett.2020.137681] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
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10
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Norell J, Eckert S, Van Kuiken BE, Föhlisch A, Odelius M. Ab initio simulations of complementary K-edges and solvatization effects for detection of proton transfer in aqueous 2-thiopyridone. J Chem Phys 2019; 151:114117. [PMID: 31542028 DOI: 10.1063/1.5109840] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2023] Open
Affiliation(s)
- J. Norell
- Department of Physics, AlbaNova University Center, Stockholm University, SE-106 91 Stockholm, Sweden
| | - S. Eckert
- Institut für Physik und Astronomie, Universität Potsdam, Karl-Liebknecht-Str. 24/25, 14476 Potsdam, Germany
| | | | - A. Föhlisch
- Institut für Physik und Astronomie, Universität Potsdam, Karl-Liebknecht-Str. 24/25, 14476 Potsdam, Germany
- Institute for Methods and Instrumentation for Synchrotron Radiation Research, Helmholtz-Zentrum Berlin für Materialien und Energie GmbH, Albert-Einstein-Str. 15, 12489 Berlin, Germany
| | - M. Odelius
- Department of Physics, AlbaNova University Center, Stockholm University, SE-106 91 Stockholm, Sweden
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11
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Norell J, Ljungdahl A, Odelius M. Interdependent Electronic Structure, Protonation, and Solvatization of Aqueous 2-Thiopyridone. J Phys Chem B 2019; 123:5555-5567. [PMID: 31244103 DOI: 10.1021/acs.jpcb.9b03084] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Abstract
2-Thiopyridone (2-TP), a common model system for excited-state proton transfer, has been simulated in aqueous solution with ab initio molecular dynamics. The interplay of electronic structure, protonation, and solvatization is investigated by comparison of three differently protonated molecular forms and between the lowest singlet and triplet electronic states. An interdependence clearly manifests in the mixed-character T1 state for the 2-TP form, systematic structural distortions of the 2-mercaptopyridine (2-MP) form, and photobase protolysis of the 2-TP- form, in the aqueous phase. In comparison, simplified continuum models for the solvatization are found to be significantly inaccurate for several of the species. To facilitate future computational studies, we therefore present a minimal representative solvatization complex for each stable form and electronic state. Our findings demonstrate the importance of explicit solvatization of the compound and sets the stage for including it also in future studies.
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Affiliation(s)
- Jesper Norell
- Department of Physics, AlbaNova University Center , Stockholm University , SE-106 91 Stockholm , Sweden
| | - Anton Ljungdahl
- Department of Physics, AlbaNova University Center , Stockholm University , SE-106 91 Stockholm , Sweden
| | - Michael Odelius
- Department of Physics, AlbaNova University Center , Stockholm University , SE-106 91 Stockholm , Sweden
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12
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Eckert S, Norell J, Jay RM, Fondell M, Mitzner R, Odelius M, Föhlisch A. T 1 Population as the Driver of Excited-State Proton-Transfer in 2-Thiopyridone. Chemistry 2019; 25:1733-1739. [PMID: 30452789 PMCID: PMC6470867 DOI: 10.1002/chem.201804166] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/15/2018] [Indexed: 01/02/2023]
Abstract
Excited-state proton transfer (ESPT) is a fundamental process in biomolecular photochemistry, but its underlying mediators often evade direct observation. We identify a distinct pathway for ESPT in aqueous 2-thiopyridone, by employing transient N 1s X-ray absorption spectroscopy and multi-configurational spectrum simulations. Photoexcitations to the singlet S2 and S4 states both relax promptly through intersystem crossing to the triplet T1 state. The T1 state, through its rapid population and near nanosecond lifetime, mediates nitrogen site deprotonation by ESPT in a secondary intersystem crossing to the S0 potential energy surface. This conclusively establishes a dominant ESPT pathway for the system in aqueous solution, which is also compatible with previous measurements in acetonitrile. Thereby, the hitherto open questions of the pathway for ESPT in the compound, including its possible dependence on excitation wavelength and choice of solvent, are resolved.
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Affiliation(s)
- Sebastian Eckert
- Institut für Physik und Astronomie, Universität Potsdam, Karl-Liebknecht-Straße 24/25, 14476, Potsdam, Germany
| | - Jesper Norell
- Department of Physics, Stockholm University, AlbaNova University Centre, 10691, Stockholm, Sweden
| | - Raphael M Jay
- Institut für Physik und Astronomie, Universität Potsdam, Karl-Liebknecht-Straße 24/25, 14476, Potsdam, Germany
| | - Mattis Fondell
- Institute for Methods and Instrumentation for, Synchrotron Radiation Research, Helmholtz-Zentrum für Materialien und Energie GmbH, Albert-Einstein-Straße 15, 12489, Berlin, Germany
| | - Rolf Mitzner
- Institute for Methods and Instrumentation for, Synchrotron Radiation Research, Helmholtz-Zentrum für Materialien und Energie GmbH, Albert-Einstein-Straße 15, 12489, Berlin, Germany
| | - Michael Odelius
- Department of Physics, Stockholm University, AlbaNova University Centre, 10691, Stockholm, Sweden
| | - Alexander Föhlisch
- Institut für Physik und Astronomie, Universität Potsdam, Karl-Liebknecht-Straße 24/25, 14476, Potsdam, Germany.,Institute for Methods and Instrumentation for, Synchrotron Radiation Research, Helmholtz-Zentrum für Materialien und Energie GmbH, Albert-Einstein-Straße 15, 12489, Berlin, Germany
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13
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Jay RM, Eckert S, Fondell M, Miedema PS, Norell J, Pietzsch A, Quevedo W, Niskanen J, Kunnus K, Föhlisch A. The nature of frontier orbitals under systematic ligand exchange in (pseudo-)octahedral Fe(ii) complexes. Phys Chem Chem Phys 2018; 20:27745-27751. [PMID: 30211412 PMCID: PMC6240897 DOI: 10.1039/c8cp04341h] [Citation(s) in RCA: 20] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
The impact of ligand substitution on metal-ligand covalency and the valence excited state landscape is investigated using resonant inelastic soft X-ray scattering.
Understanding and controlling properties of transition metal complexes is a crucial step towards tailoring materials for sustainable energy applications. In a systematic approach, we use resonant inelastic X-ray scattering to study the influence of ligand substitution on the valence electronic structure around an aqueous iron(ii) center. Exchanging cyanide with 2-2′-bipyridine ligands reshapes frontier orbitals in a way that reduces metal 3d charge delocalization onto the ligands. This net decrease of metal–ligand covalency results in lower metal-centered excited state energies in agreement with previously reported excited state dynamics. Furthermore, traces of solvent-effects were found indicating a varying interaction strength of the solvent with ligands of different character. Our results demonstrate how ligand exchange can be exploited to shape frontier orbitals of transition metal complexes in solution-phase chemistry; insights upon which future efforts can built when tailoring the functionality of photoactive systems for light-harvesting applications.
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Affiliation(s)
- Raphael M Jay
- Universität Potsdam, Institut für Physik und Astronomie, 14476 Potsdam, Germany.
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14
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Meyer F, Blum M, Benkert A, Hauschild D, Jeyachandran YL, Wilks RG, Yang W, Bär M, Reinert F, Heske C, Zharnikov M, Weinhardt L. Site-specific electronic structure of imidazole and imidazolium in aqueous solutions. Phys Chem Chem Phys 2018. [DOI: 10.1039/c7cp07885d] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The electronic structures of aqueous imidazole and imidazolium solutions are studied in an atom- and site-specific fashion using soft X-ray spectroscopy.
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